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Jan Dekker

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Elisabet Romero; Wiliam J Coleman; Jan P Dekker; Bruce A Diner; Peter J Nixon; Rienk van Grondelle
Mixed exciton-charge-transfer states in photosystem II: Stark spectroscopy on site-directed mutants.
Roman Kouřil; Jan P Dekker; Egbert J Boekema
Supramolecular organization of photosystem II in green plants.
Anjali Pandit; Nazhat Shirzad-Wasei; Henny van Roon; Lucyna M Wlodarczyk; Egbert J Boekema; Jan P Dekker; Willem J De Grip
Assembly of the major light-harvesting complex II in lipid nanodiscs.

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All Publications

2012: Elisabet Romero; Wiliam J Coleman; Jan P Dekker; Bruce A Diner; Peter J Nixon; Rienk van Grondelle
Mixed exciton-charge-transfer states in photosystem II: Stark spectroscopy on site-directed mutants.
Biophysical journal 2012;103(2):185-94.
2012: Roman Kouřil; Jan P Dekker; Egbert J Boekema
Supramolecular organization of photosystem II in green plants.
Biochimica et biophysica acta 2012;1817(1):2-12.
2011: Anjali Pandit; Nazhat Shirzad-Wasei; Henny van Roon; Lucyna M Wlodarczyk; Egbert J Boekema; Jan P Dekker; Willem J De Grip
Assembly of the major light-harvesting complex II in lipid nanodiscs.
Biophysical journal 2011;101(10):2507-15.
2011: Kinga Sznee; Henny van Roon; Gijs J L Wuite; Remus Dame; Jan P Dekker; Raoul N Frese
Jumping mode atomic force microscopy on grana membranes from spinach.
The Journal of biological chemistry 2011;286(45):39164-71.
2011: Marko Boehm; Elisabet Romero; Veronika Reisinger; Jianfeng Yu; Josef Komenda; Lutz A Eichacker; Jan P Dekker; Peter J Nixon
Investigating the early stages of photosystem II assembly in Synechocystis sp. PCC 6803: isolation of CP47 and CP43 complexes.
The Journal of biological chemistry 2011;286(17):14812-9.
2011: C D van der Weij-de Wit; Jan P Dekker; Rienk van Grondelle; Ivo H M van Stokkum
Charge separation is virtually irreversible in photosystem II core complexes with oxidized primary quinone acceptor.
The journal of physical chemistry. A 2011;115(16):3947-56.
2011: Elisabet Romero; Ivo H M van Stokkum; Jan P Dekker; Rienk van Grondelle
Ultrafast carotenoid band shifts correlated with ChlZ excited states in the photosystem II reaction center: are the carotenoids involved in energy transfer?
Physical chemistry chemical physics : PCCP 2011;13(13):5573-5.
2011: Vladimir I Novoderezhkin; Elisabet Romero; Jan P Dekker; Rienk van Grondelle
Multiple charge-separation pathways in photosystem II: modeling of transient absorption kinetics.
Chemphyschem : a European journal of chemical physics and physical chemistry 2011;12(3):681-8.
2010: Elisabet Romero; Ivo H M van Stokkum; Vladimir I Novoderezhkin; Jan P Dekker; Rienk van Grondelle
Two different charge separation pathways in photosystem II.
Biochemistry 2010;49(20):4300-7.
2009: Rudi Berera; Ivo H M van Stokkum; Sandrine D'Haene; John T M Kennis; Rienk van Grondelle; Jan P Dekker
A mechanism of energy dissipation in cyanobacteria.
Biophysical journal 2009;96(6):2261-7.
2009: Elisabet Romero; Milena Mozzo; Ivo H M van Stokkum; Jan P Dekker; Rienk van Grondelle; Roberta Croce
The origin of the low-energy form of photosystem I light-harvesting complex Lhca4: mixing of the lowest exciton with a charge-transfer state.
Biophysical journal 2009;96(5):L35-7.
2008: Sami Kereïche; Roman Kouril; Gert T Oostergetel; Fabrizia Fusetti; Egbert J Boekema; Alexander B Doust; Chantal D van der Weij-de Wit; Jan P Dekker
Association of chlorophyll a/c(2) complexes to photosystem I and photosystem II in the cryptophyte Rhodomonas CS24.
Biochimica et biophysica acta 2008;1777(9):1122-8.
2008: Chantal D van der Weij-de Wit; Alexander B Doust; Ivo H M van Stokkum; Jan P Dekker; Krystyna E Wilk; Paul M G Curmi; Rienk van Grondelle
Phycocyanin sensitizes both photosystem I and photosystem II in cryptophyte Chroomonas CCMP270 cells.
Biophysical journal 2008;94(6):2423-33.
2007: Chantal D van der Weij-de Wit; Janne A Ihalainen; Edith van de Vijver; Sandrine D'Haene; Hans C P Matthijs; Rienk van Grondelle; Jan P Dekker
Fluorescence quenching of IsiA in early stage of iron deficiency and at cryogenic temperatures.
Biochimica et biophysica acta 2007;1767(12):1393-400.
2007: Roberta Croce; Agnieszka Chojnicka; Tomas Morosinotto; Janne A Ihalainen; Frank van Mourik; Jan P Dekker; Roberto Bassi; Rienk van Grondelle
The low-energy forms of photosystem I light-harvesting complexes: spectroscopic properties and pigment-pigment interaction characteristics.
Biophysical journal 2007;93(7):2418-28.
2007: Vladimir I Novoderezhkin; Jan P Dekker; Rienk van Grondelle
Mixing of exciton and charge-transfer states in Photosystem II reaction centers: modeling of Stark spectra with modified Redfield theory.
Biophysical journal 2007;93(4):1293-311.
2007: Chantal D van der Weij-de Wit; Janne A Ihalainen; Rienk van Grondelle; Jan P Dekker
Excitation energy transfer in native and unstacked thylakoid membranes studied by low temperature and ultrafast fluorescence spectroscopy.
Photosynthesis research 2007;93(1-3):173-82.
2007: Poul Erik Jensen; Roberto Bassi; Egbert J Boekema; Jan P Dekker; Stefan Jansson; Dario Leister; Colin Robinson; Henrik Vibe Scheller
Structure, function and regulation of plant photosystem I.
Biochimica et biophysica acta 2007;1767(5):335-52.
2006: Chantal D van der Weij-de Wit; Alexander B Doust; Ivo H M van Stokkum; Jan P Dekker; Krystyna E Wilk; Paul M G Curmi; Gregory D Scholes; Rienk van Grondelle
How energy funnels from the phycoerythrin antenna complex to photosystem I and photosystem II in cryptophyte Rhodomonas CS24 cells.
The journal of physical chemistry. B 2006;110(49):25066-73.
2006: Koen Broess; Gediminas Trinkunas; Chantal D van der Weij-de Wit; Jan P Dekker; Arie van Hoek; Herbert van Amerongen
Excitation energy transfer and charge separation in photosystem II membranes revisited.
Biophysical journal 2006;91(10):3776-86.
2005: Krzysztof Gibasiewicz; Anna Szrajner; Janne A Ihalainen; Marta Germano; Jan P Dekker; Rienk van Grondelle
Characterization of low-energy chlorophylls in the PSI-LHCI supercomplex from Chlamydomonas reinhardtii. A site-selective fluorescence study.
The journal of physical chemistry. B 2005;109(44):21180-6.
2005: Janne A Ihalainen; Roberta Croce; Tomas Morosinotto; Ivo H M van Stokkum; Roberto Bassi; Jan P Dekker; Rienk van Grondelle
Excitation decay pathways of Lhca proteins: a time-resolved fluorescence study.
The journal of physical chemistry. B 2005;109(44):21150-8.
2005: Vladimir I Novoderezhkin; Elena G Andrizhiyevskaya; Jan P Dekker; Rienk van Grondelle
Pathways and timescales of primary charge separation in the photosystem II reaction center as revealed by a simultaneous fit of time-resolved fluorescence and transient absorption.
Biophysical journal 2005;89(3):1464-81.
2005: Janne A Ihalainen; Frank Klimmek; Ulrika Ganeteg; Ivo H M van Stokkum; Rienk van Grondelle; Stefan Jansson; Jan P Dekker
Excitation energy trapping in photosystem I complexes depleted in Lhca1 and Lhca4.
FEBS letters 2005;579(21):4787-91.
2005: Roman Kouril; Agnieszka Zygadlo; Ana A Arteni; Chantal D de Wit; Jan P Dekker; Poul Erik Jensen; Henrik Vibe Scheller; Egbert J Boekema
Structural characterization of a complex of photosystem I and light-harvesting complex II of Arabidopsis thaliana.
Biochemistry 2005;44(33):10935-40.
2005: Janne A Ihalainen; Sandrine D'Haene; Nataliya Yeremenko; Henny van Roon; Ana A Arteni; Egbert J Boekema; Rienk van Grondelle; Hans C P Matthijs; Jan P Dekker
Aggregates of the chlorophyll-binding protein IsiA (CP43') dissipate energy in cyanobacteria.
Biochemistry 2005;44(32):10846-53.
2005: Roman Kouril; Ana A Arteni; Julia Lax; Nataliya Yeremenko; Sandrine D'Haene; Matthias Rögner; Hans C P Matthijs; Jan P Dekker; Egbert J Boekema
Structure and functional role of supercomplexes of IsiA and Photosystem I in cyanobacterial photosynthesis.
FEBS letters 2005;579(15):3253-7.
2005: Elena G Andrizhiyevskaya; Agnieszka Chojnicka; James A Bautista; Bruce A Diner; Rienk van Grondelle; Jan P Dekker
Origin of the F685 and F695 fluorescence in photosystem II.
Photosynthesis research 2005;84(1-3):173-80.
2005: Frank Klimmek; Ulrika Ganeteg; Janne A Ihalainen; Henny van Roon; Poul Erik Jensen; Henrik Vibe Scheller; Jan P Dekker; Stefan Jansson
Structure of the higher plant light harvesting complex I: in vivo characterization and structural interdependence of the Lhca proteins.
Biochemistry 2005;44(8):3065-73.
2005: Krzysztof Gibasiewicz; Roberta Croce; Tomas Morosinotto; Janne A Ihalainen; Ivo H M van Stokkum; Jan P Dekker; Roberto Bassi; Rienk van Grondelle
Excitation energy transfer pathways in Lhca4.
Biophysical journal 2005;88(3):1959-69.
2005: Janne A Ihalainen; Ivo H M van Stokkum; Krzysztof Gibasiewicz; Marta Germano; Rienk van Grondelle; Jan P Dekker
Kinetics of excitation trapping in intact Photosystem I of Chlamydomonas reinhardtii and Arabidopsis thaliana.
Biochimica et biophysica acta 2005;1706(3):267-75.
2005: Roman Kouril; Nataliya Yeremenko; Sandrine D'Haene; Gert T Oostergetel; Hans C P Matthijs; Jan P Dekker; Egbert J Boekema
Supercomplexes of IsiA and photosystem I in a mutant lacking subunit PsaL.
Biochimica et biophysica acta 2005;1706(3):262-6.
2005: Jan P Dekker; Egbert J Boekema
Supramolecular organization of thylakoid membrane proteins in green plants.
Biochimica et biophysica acta 2005;1706(1-2):12-39.
2005: Stephan-Olav Wenk; Dirk Schneider; Ute Boronowsky; Cornelia Jäger; Christof Klughammer; Frank L de Weerd; Henny van Roon; Wim F J Vermaas; Jan P Dekker; Matthias Rögner
Functional implications of pigments bound to a cyanobacterial cytochrome b6f complex.
The FEBS journal 2005;272(2):582-92.
2004: Roberta Croce; Tomas Morosinotto; Janne A Ihalainen; Agnieszka Chojnicka; Jacques Breton; Jan P Dekker; Rienk van Grondelle; Roberto Bassi
Origin of the 701-nm fluorescence emission of the Lhca2 subunit of higher plant photosystem I.
The Journal of biological chemistry 2004;279(47):48543-9.
2004: Nataliya Yeremenko; Roman Kouril; Janne A Ihalainen; Sandrine D'Haene; Niels van Oosterwijk; Elena G Andrizhiyevskaya; Wilko Keegstra; Henk L Dekker; Martin Hagemann; Egbert J Boekema; Hans C P Matthijs; Jan P Dekker
Supramolecular organization and dual function of the IsiA chlorophyll-binding protein in cyanobacteria.
Biochemistry 2004;43(32):10308-13.
2004: Elena G Andrizhiyevskaya; Dmitrij Frolov; Rienk van Grondelle; Jan P Dekker
Energy transfer and trapping in the Photosystem I complex of Synechococcus PCC 7942 and in its supercomplex with IsiA.
Biochimica et biophysica acta 2004;1656(2-3):104-13.
2004: Marta Germano; Claudiu C Gradinaru; Anatoli Ya Shkuropatov; Ivo H M van Stokkum; Vladimir A Shuvalov; Jan P Dekker; Rienk van Grondelle; Hans J van Gorkom
Energy and electron transfer in photosystem II reaction centers with modified pheophytin composition.
Biophysical journal 2004;86(3):1664-72.
2003: Bas Gobets; Ivo H M van Stokkum; Frank van Mourik; Jan P Dekker; Rienk van Grondelle
Excitation wavelength dependence of the fluorescence kinetics in Photosystem I particles from Synechocystis PCC 6803 and Synechococcus elongatus.
Biophysical journal 2003;85(6):3883-98.
2003: Heike Witt; Enrica Bordignon; Donatella Carbonera; Jan P Dekker; Navassard V Karapetyan; Christian Teutloff; Andrew Webber; Wolfgang Lubitz; Eberhard Schlodder
Species-specific differences of the spectroscopic properties of P700: analysis of the influence of non-conserved amino acid residues by site-directed mutagenesis of photosystem I from Chlamydomonas reinhardtii.
The Journal of biological chemistry 2003;278(47):46760-71.
2003: Roman Kouril; Nataliya Yeremenko; Sandrine D'Haene; Alevtyna E Yakushevska; Wilko Keegstra; Hans C P Matthijs; Jan P Dekker; Egbert J Boekema
Photosystem I trimers from Synechocystis PCC 6803 lacking the PsaF and PsaJ subunits bind an IsiA ring of 17 units.
Biochimica et biophysica acta 2003;1607(1):1-4.
2003: raoul frese; Marta Germano; Frank L de Weerd; Ivo H M van Stokkum; Anatoli Ya Shkuropatov; Vladimir A Shuvalov; Hans J van Gorkom; Rienk van Grondelle; Jan P Dekker
Electric field effects on the chlorophylls, pheophytins, and beta-carotenes in the reaction center of photosystem II.
Biochemistry 2003;42(30):9205-13.
2003: Alexander V Ruban; Mark Wentworth; Alevtyna E Yakushevska; Jenny Andersson; Pamela J Lee; Wilko Keegstra; Jan P Dekker; Egbert J Boekema; Stefan Jansson; Peter Horton
Plants lacking the main light-harvesting complex retain photosystem II macro-organization.
Nature 2003;421(6923):648-52.
2003: Alevtyna E Yakushevska; Wilko Keegstra; Egbert J Boekema; Jan P Dekker; Jenny Andersson; Stefan Jansson; Alexander V Ruban; Peter Horton
The structure of photosystem II in Arabidopsis: localization of the CP26 and CP29 antenna complexes.
Biochemistry 2003;42(3):608-13.
2002: Frank L de Weerd; Miguel A Palacios; Elena G Andrizhiyevskaya; Jan P Dekker; Rienk van Grondelle
Identifying the lowest electronic states of the chlorophylls in the CP47 core antenna protein of photosystem II.
Biochemistry 2002;41(51):15224-33.
2002: Elena G Andrizhiyevskaya; Tatjana Schwabe; Marta Germano; Sandrine D'Haene; Jochen Kruip; Rienk van Grondelle; Jan P Dekker
Spectroscopic properties of PSI-IsiA supercomplexes from the cyanobacterium Synechococcus PCC 7942.
Biochimica et biophysica acta 2002;1556(2-3):265-72.
2002: Janne A Ihalainen; Poul Erik Jensen; Anna Haldrup; Ivo H M van Stokkum; Rienk van Grondelle; Henrik Vibe Scheller; Jan P Dekker
Pigment organization and energy transfer dynamics in isolated photosystem I (PSI) complexes from Arabidopsis thaliana depleted of the PSI-G, PSI-K, PSI-L, or PSI-N subunit.
Biophysical journal 2002;83(4):2190-201.
2002: Marta Germano; Alevtyna E Yakushevska; Wilko Keegstra; Hans J van Gorkom; Jan P Dekker; Egbert J Boekema
Supramolecular organization of photosystem I and light-harvesting complex I in Chlamydomonas reinhardtii.
FEBS letters 2002;525(1-3):121-5.
2002: raoul frese; Miguel A Palacios; Aissa Azzizi; Ivo H M van Stokkum; Jochen Kruip; Matthias Rögner; Navassard V Karapetyan; Eberhard Schlodder; Rienk van Grondelle; Jan P Dekker
Electric field effects on red chlorophylls, beta-carotenes and P700 in cyanobacterial Photosystem I complexes.
Biochimica et biophysica acta 2002;1554(3):180-91.
2002: Frank L de Weerd; Ivo H M van Stokkum; Herbert van Amerongen; Jan P Dekker; Rienk van Grondelle
Pathways for energy transfer in the core light-harvesting complexes CP43 and CP47 of photosystem II.
Biophysical journal 2002;82(3):1586-97.
2001: Alevtyna E Yakushevska; Poul Erik Jensen; Wilko Keegstra; Henny van Roon; Henrik Vibe Scheller; Egbert J Boekema; Jan P Dekker
Supermolecular organization of photosystem II and its associated light-harvesting antenna in Arabidopsis thaliana.
European journal of biochemistry / FEBS 2001;268(23):6020-8.
2001: Bas Gobets; Ivo H M van Stokkum; Matthias Rögner; Jochen Kruip; Eberhard Schlodder; Navassard V Karapetyan; Jan P Dekker; Rienk van Grondelle
Time-resolved fluorescence emission measurements of photosystem I particles of various cyanobacteria: a unified compartmental model.
Biophysical journal 2001;81(1):407-24.
2001: Egbert J Boekema; Poul Erik Jensen; Eberhard Schlodder; JF van Breemen; Henny van Roon; Henrik Vibe Scheller; Jan P Dekker
Green plant photosystem I binds light-harvesting complex I on one side of the complex.
Biochemistry 2001;40(4):1029-36.
2000: Egbert J Boekema; JF van Breemen; Henny van Roon; Jan P Dekker
Conformational changes in photosystem II supercomplexes upon removal of extrinsic subunits.
Biochemistry 2000;39(42):12907-15.
2000: Egbert J Boekema; JF van Breemen; Henny van Roon; Jan P Dekker
Arrangement of photosystem II supercomplexes in crystalline macrodomains within the thylakoid membrane of green plant chloroplasts.
Journal of molecular biology 2000;301(5):1123-33.
2000: Janne A Ihalainen; Bas Gobets; K Sznee; M Brazzoli; Roberta Croce; Roberto Bassi; Rienk van Grondelle; Jouko Korppi-Tommola; Jan P Dekker
Evidence for two spectroscopically different dimers of light-harvesting complex I from green plants.
Biochemistry 2000;39(29):8625-31.
1999: Marie Louise Groot; raoul frese; Frank L de Weerd; K Bromek; A Pettersson; Erwin J G Peterman; Ivo H M van Stokkum; Rienk van Grondelle; Jan P Dekker
Spectroscopic properties of the CP43 core antenna protein of photosystem II.
Biophysical journal 1999;77(6):3328-40.
1999: Egbert J Boekema; Henny van Roon; JF van Breemen; Jan P Dekker
Supramolecular organization of photosystem II and its light-harvesting antenna in partially solubilized photosystem II membranes.
European journal of biochemistry / FEBS 1999;266(2):444-52.
1999: Jan P Dekker; Henny van Roon; E J Boekem
Heptameric association of light-harvesting complex II trimers in partially solubilized photosystem II membranes.
FEBS letters 1999;449(2-3):211-4.
1999: Egbert J Boekema; Henny van Roon; F Calkoen; Roberto Bassi; Jan P Dekker
Multiple types of association of photosystem II and its light-harvesting antenna in partially solubilized photosystem II membranes.
Biochemistry 1999;38(8):2233-9.
1998: Erwin J G Peterman; Stephan-Olav Wenk; T Pullerits; L O Pâlsson; Rienk van Grondelle; Jan P Dekker; Matthias Rögner; Herbert van Amerongen
Fluorescence and absorption spectroscopy of the weakly fluorescent chlorophyll a in cytochrome b6f of Synechocystis PCC6803.
Biophysical journal 1998;75(1):389-98.
1998: Erwin J G Peterman; Jan P Dekker
The nature of the excited state of the reaction center of photosystem II of green plants: a high-resolution fluorescence spectroscopy study.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(11):6128-33.
1998: L O Pålsson; C Flemming; Bas Gobets; Rienk van Grondelle; Jan P Dekker; Eberhard Schlodder
Energy transfer and charge separation in photosystem I: P700 oxidation upon selective excitation of the long-wavelength antenna chlorophylls of Synechococcus elongatus.
Biophysical journal 1998;74(5):2611-22.
1998: Egbert J Boekema; Henny van Roon; Jan P Dekker
Specific association of photosystem II and light-harvesting complex II in partially solubilized photosystem II membranes.
FEBS letters 1998;424(1-2):95-9.
1998: P Manna; Russell LoBrutto; C Eijckelhoff; Jan P Dekker; Wim F J Vermaas
Role of Arg180 of the D2 protein in photosystem II structure and function.
European journal of biochemistry / FEBS 1998;251(1-2):142-54.
1997: Marie Louise Groot; C Eijckelhoff; Jan P Dekker
Charge separation in the reaction center of photosystem II studied as a function of temperature.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(9):4389-94.
1996: C Eijckelhoff; Henny van Roon; Marie Louise Groot; Rienk van Grondelle; Jan P Dekker
Purification and spectroscopic characterization of photosystem II reaction center complexes isolated with or without Triton X-100.
Biochemistry 1996;35(39):12864-72.
1995: J R Durrant; David R Klug; S L Kwa; Rienk van Grondelle; George Porter; Jan P Dekker
A multimer model for P680, the primary electron donor of photosystem II.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(11):4798-802.
1995: Marie Louise Groot; Erwin J G Peterman; Ivo H M van Stokkum; Jan P Dekker; Rienk van Grondelle
Triplet and fluorescing states of the CP47 antenna complex of photosystem II studied as a function of temperature.
Biophysical journal 1995;68(1):281-90.
1994: S Nussberger; Jan P Dekker; Werner Kühlbrandt; B M van Bolhuis; Rienk van Grondelle; Herbert van Amerongen
Spectroscopic characterization of three different monomeric forms of the main chlorophyll a/b binding protein from chloroplast membranes.
Biochemistry 1994;33(49):14775-83.
1994: B van Haeringen; Jan P Dekker; M Bloemendal; Matthias Rögner; Rienk van Grondelle; Herbert van Amerongen
Simultaneous measurement of electric birefringence and dichroism. A study on photosystem 1 particles.
Biophysical journal 1994;67(1):411-7.
1994: Marie Louise Groot; Erwin J G Peterman; P J van Kan; Ivo H M van Stokkum; Jan P Dekker; Rienk van Grondelle
Temperature-dependent triplet and fluorescence quantum yields of the photosystem II reaction center described in a thermodynamic model.
Biophysical journal 1994;67(1):318-30.
1994: Egbert J Boekema; A F Boonstra; Jan P Dekker; Matthias Rögner
Electron microscopic structural analysis of Photosystem I, Photosystem II, and the cytochrome b6/f complex from green plants and cyanobacteria.
Journal of bioenergetics and biomembranes 1994;26(1):17-29.
1990: Jan P Dekker; Scott D Betts; Charles F Yocum; Egbert J Boekema
Characterization by electron microscopy of isolated particles and two-dimensional crystals of the CP47-D1-D2-cytochrome b-559 complex of photosystem II.
Biochemistry 1990;29(13):3220-5.
1990: J Petersen; Jan P Dekker; N R Bowlby; D F Ghanotakis; Charles F Yocum; Gerald T Babcock
EPR characterization of the CP47-D1-D2-cytochrome b-559 complex of photosystem II.
Biochemistry 1990;29(13):3226-31.