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Rudolf Amann

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Lars Wöhlbrand; Richard Reinhardt; Heinz Wilkes; Rudolf Amann; Alfred Beck; Jacob H Jacob; René Jarling; Michael Kube; Marc Mussmann; Ralf Rabus
Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium.
Rudolf Amann; Cristina Moraru
Two decades of fluorescence in situ hybridization in systematic and applied microbiology.
Cristina Moraru; Rudolf Amann
Crystal ball: fluorescence in situ hybridization in the age of super-resolution microscopy.

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2013: Lars Wöhlbrand; Richard Reinhardt; Heinz Wilkes; Rudolf Amann; Alfred Beck; Jacob H Jacob; René Jarling; Michael Kube; Marc Mussmann; Ralf Rabus
Complete genome, catabolic sub-proteomes and key-metabolites of Desulfobacula toluolica Tol2, a marine, aromatic compound-degrading, sulfate-reducing bacterium.
Environmental microbiology 2013;15(5):1334-55.
2012: Rudolf Amann; Cristina Moraru
Two decades of fluorescence in situ hybridization in systematic and applied microbiology.
Systematic and applied microbiology 2012;35(8):483-4.
2012: Cristina Moraru; Rudolf Amann
Crystal ball: fluorescence in situ hybridization in the age of super-resolution microscopy.
Systematic and applied microbiology 2012;35(8):549-52.
2012: Stefan Thiele; Bernhard M Fuchs; Nagappa Ramaiah; Rudolf Amann
Microbial community response during the iron fertilization experiment LOHAFEX.
Applied and environmental microbiology 2012;78(24):8803-12.
2012: Sabine Lenk; Cristina Moraru; Richard Reinhardt; Michael Richter; Rudolf Amann; Julia Arnds; Thorsten Brinkhoff; Sarah Hahnke; Jens Harder; Michael Kube; Marc Mussmann
Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes.
The ISME journal 2012;6(12):2178-87.
2012: Sara Kleindienst; Rudolf Amann; Alban Ramette; Katrin Knittel
Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments.
Environmental microbiology 2012;14(10):2689-710.
2012: Kyoko Kubo; Karen G Lloyd; Andreas Teske; Rudolf Amann; Jennifer F Biddle; Katrin Knittel
Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments.
The ISME journal 2012;6(10):1949-65.
2012: Birgit Voigt; Hanno Teeling; Rudolf Amann; Dörte Becher; Frank Oliver Glöckner; Michael Hecker; Kristina Hempel; Cao Xuan Hieu; Rabea Schlüter; Thomas Schweder
Cell surface proteome of the marine planctomycete Rhodopirellula baltica.
Proteomics 2012;12(11):1781-91.
2012: Hanno Teeling; Jost Waldmann; Marc Weber; Antje Wichels; Karen H Wiltshire; Dörte Becher; Christin M Bennke; Jörg Bernhardt; Frank D Bockelmann; Ulrich Callies; Bernhard M Fuchs; Antje Gardebrecht; Gunnar Gerdts; Frank Oliver Glöckner; Michael Hecker; Sixing Huang; Mariette Kassabgy; Anna Klindworth; Christine Klockow; Jana Lange; Alexander J Mann; Andreas Otto; Jörg Peplies; Christine Reinsch; Thomas Schweder; Rudolf Amann
Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom.
Science (New York, N.Y.) 2012;336(6081):608-11.
2012: Verena Salman; Rudolf Amann; David A Shub; Heide N Schulz-Vogt
Multiple self-splicing introns in the 16S rRNA genes of giant sulfur bacteria.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(11):4203-8.
2011: Thomas Holler; Matthias Y Kellermann; Katrin Knittel; Andreas Teske; Rudolf Amann; Antje Boetius; Kai-Uwe Hinrichs; Friedrich Widdel; Gunter Wegener
Thermophilic anaerobic oxidation of methane by marine microbial consortia.
The ISME journal 2011;5(12):1946-56.
2011: Regina Schauer; Frank Wenzhoefer; Marc Peters; Hans Røy; Rudolf Amann; Nico Augustin; Hans-Hermann Gennerich; Anke Meyerdierks
Bacterial sulfur cycling shapes microbial communities in surface sediments of an ultramafic hydrothermal vent field.
Environmental microbiology 2011;13(10):2633-48.
2011: Jillian M Petersen; Richard Seifert; Scott D Wankel; Frank U Zielinski; Rudolf Amann; Wolfgang Bach; Valerie Barbe; Christian Borowski; Dennis Fink; Peter R Girguis; Stephane Hourdez; Cristina Moraru; Thomas Pape; Eric Pelletier; Nicole Dubilier
Hydrogen is an energy source for hydrothermal vent symbioses.
Nature 2011;476(7359):176-80.
2011: Ilaria Pizzetti; Antje Wichels; Karen H Wiltshire; Bernhard M Fuchs; Gunnar Gerdts; Rudolf Amann
Temporal variability of coastal Planctomycetes clades at Kabeltonne station, North Sea.
Applied and environmental microbiology 2011;77(14):5009-17.
2011: Verena Salman; Rudolf Amann; Anne-Christin Girnth; Lubos Polerecky; Jake V Bailey; Signe Høgslund; Gerdhard Jessen; Silvio Pantoja; Heide N Schulz-Vogt
A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria.
Systematic and applied microbiology 2011;34(4):243-59.
2011: Kyoko Kubo; Katrin Knittel; Rudolf Amann; Manabu Fukui; Katsumi Matsuura
Sulfur-metabolizing bacterial populations in microbial mats of the Nakabusa hot spring, Japan.
Systematic and applied microbiology 2011;34(4):293-302.
2011: Marc Weber; Hanno Teeling; Sixing Huang; Jost Waldmann; Mariette Kassabgy; Bernhard M Fuchs; Anna Klindworth; Christine Klockow; Antje Wichels; Gunnar Gerdts; Rudolf Amann; Frank Oliver Glöckner
Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics.
The ISME journal 2011;5(5):918-28.
2011: Sabine Lenk; Julia Arnds; Katrice Zerjatke; Niculina Musat; Rudolf Amann; Marc Mussmann
Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment.
Environmental microbiology 2011;13(3):758-74.
2011: Christian Jogler; Gerhard Wanner; Sebastian Kolinko; Martina Niebler; Rudolf Amann; Nikolai Petersen; Michael Kube; Richard Reinhardt; Dirk Schüler
Conservation of proteobacterial magnetosome genes and structures in an uncultivated member of the deep-branching Nitrospira phylum.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(3):1134-9.
2010: Cristina Moraru; Phyllis Lam; Bernhard M Fuchs; Marcel M M Kuypers; Rudolf Amann
GeneFISH--an in situ technique for linking gene presence and cell identity in environmental microorganisms.
Environmental microbiology 2010;12(11):3057-73.
2010: Lars Schreiber; Thomas Holler; Katrin Knittel; Anke Meyerdierks; Rudolf Amann
Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade.
Environmental microbiology 2010;12(8):2327-40.
2010: Arantxa Peña; Hanno Teeling; Jaime Huerta-Cepas; Fernando Santos; Pablo Yarza; Jocelyn Brito-Echeverría; Marianna Lucio; philippe schmitt-kopplin; Inmaculada Meseguer; Chantal Schenowitz; Carole Dossat; Valerie Barbe; Joaquín Dopazo; Ramon Rosselló-Mora; Margarete Schüler; Frank Oliver Glöckner; Rudolf Amann; Toni Gabaldón; Josefa Antón
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains.
The ISME journal 2010;4(7):882-95.
2010: Francesca Simonato; Paola R Gómez-Pereira; Bernhard M Fuchs; Rudolf Amann
Bacterioplankton diversity and community composition in the Southern Lagoon of Venice.
Systematic and applied microbiology 2010;33(3):128-38.
2010: Julia Arnds; Katrin Knittel; Ulrike Buck; Matthias Winkel; Rudolf Amann
Development of a 16S rRNA-targeted probe set for Verrucomicrobia and its application for fluorescence in situ hybridization in a humic lake.
Systematic and applied microbiology 2010;33(3):139-48.
2010: Paola R Gómez-Pereira; Bernhard M Fuchs; Cecilia Alonso; Matthew J Oliver; Justus E E van Beusekom; Rudolf Amann
Distinct flavobacterial communities in contrasting water masses of the north Atlantic Ocean.
The ISME journal 2010;4(4):472-87.
2010: Anke Meyerdierks; Michael Kube; Ivaylo Kostadinov; Hanno Teeling; Frank Oliver Glöckner; Richard Reinhardt; Rudolf Amann
Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group.
Environmental microbiology 2010;12(2):422-39.
2009: Martha Schattenhofer; Bernhard M Fuchs; Rudolf Amann; Mikhail V Zubkov; Glen A Tarran; Jakob Pernthaler
Latitudinal distribution of prokaryotic picoplankton populations in the Atlantic Ocean.
Environmental microbiology 2009;11(8):2078-93.
2009: Ulrike Buck; Hans-Peter Grossart; Rudolf Amann; Jakob Pernthaler
Substrate incorporation patterns of bacterioplankton populations in stratified and mixed waters of a humic lake.
Environmental microbiology 2009;11(7):1854-65.
2009: Christian Jogler; Wei Lin; Anke Meyerdierks; Michael Kube; Emanuel Katzmann; Christine Flies; Yongxin Pan; Rudolf Amann; Richard Reinhardt; Dirk Schüler
Toward cloning of the magnetotactic metagenome: identification of magnetosome island gene clusters in uncultivated magnetotactic bacteria from different aquatic sediments.
Applied and environmental microbiology 2009;75(12):3972-9.
2009: Axel W Strittmatter; Heiko Liesegang; Ralf Rabus; Iwona Decker; Judith Amann; Sönke Andres; Anke Henne; W. Florian Fricke; Rosa Martinez-Arias; Daniela Bartels; Alexander Goesmann; Lutz Krause; Alfred Pühler; Hans-Peter Klenk; Michael Richter; Margarete Schüler; Frank Oliver Glöckner; Anke Meyerdierks; Gerhard Gottschalk; Rudolf Amann
Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide.
Environmental microbiology 2009;11(5):1038-55.
2009: Shi Yan; Bernhard M Fuchs; Sabine Lenk; Jens Harder; Jörg Wulf; Nian-zhi Jiao; Rudolf Amann
Biogeography and phylogeny of the NOR5/OM60 clade of Gammaproteobacteria.
Systematic and applied microbiology 2009;32(2):124-39.
2009: Phyllis Lam; Gaute Lavik; Marlene M Jensen; Jack van de Vossenberg; Markus Schmid; Dagmar Woebken; Dimitri Gutiérrez; Rudolf Amann; Mike S.M. Jetten; Marcel M M Kuypers
Revising the nitrogen cycle in the Peruvian oxygen minimum zone.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(12):4752-7.
2009: Gaute Lavik; Torben Stührmann; Volker Brüchert; Anja Van der Plas; Volker Mohrholz; Phyllis Lam; Marc Mussmann; Bernhard M Fuchs; Rudolf Amann; Ulrich Lass; Marcel M M Kuypers
Detoxification of sulphidic African shelf waters by blooming chemolithotrophs.
Nature 2009;457(7229):581-4.
2008: Niculina Musat; Hannah Halm; Bärbel Winterholler; Peter Hoppe; Sandro Peduzzi; Francois Hillion; Francois Horreard; Rudolf Amann; Bo Barker Jørgensen; Marcel M M Kuypers
A single-cell view on the ecophysiology of anaerobic phototrophic bacteria.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(46):17861-6.
2008: Dagmar Woebken; Phyllis Lam; Marcel M M Kuypers; S Wajih A Naqvi; Boran Kartal; Marc Strous; Mike S.M. Jetten; Bernhard M Fuchs; Rudolf Amann
A microdiversity study of anammox bacteria reveals a novel Candidatus Scalindua phylotype in marine oxygen minimum zones.
Environmental microbiology 2008;10(11):3106-19.
2008: Pablo Yarza; Michael Richter; Jörg Peplies; Jean Euzeby; Rudolf Amann; Karl-Heinz Schleifer; Wolfgang Ludwig; Frank Oliver Glöckner; Ramon Rosselló-Móra
The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains.
Systematic and applied microbiology 2008;31(4):241-50.
2008: Rudolf Amann; Bernhard M Fuchs
Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques.
Nature reviews. Microbiology 2008;6(5):339-48.
2008: Cao Xuan Hieu; Birgit Voigt; Dirk Albrecht; Dörte Becher; Thierry Lombardot; Frank Oliver Glöckner; Rudolf Amann; Michael Hecker; Thomas Schweder
Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T.
Proteomics 2008;8(8):1608-23.
2007: Dagmar Woebken; Hanno Teeling; Patricia Wecker; Alexandra Dumitriu; Ivaylo Kostadinov; Edward F Delong; Rudolf Amann; Frank Oliver Glöckner
Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes.
The ISME journal 2007;1(5):419-35.
2007: Marc Mussmann; Fen Ze Hu; Michael Richter; Dirk de Beer; André Preisler; Bo Barker Jørgensen; Marcel Huntemann; Frank Oliver Glöckner; Rudolf Amann; Werner J H Koopman; Roger S Lasken; Benjamin Janto; Justin Hogg; Paul Stoodley; Robert Boissy; Garth D Ehrlich
Insights into the genome of large sulfur bacteria revealed by analysis of single filaments.
PLoS biology 2007;5(9):e230.
2007: Fernando Santos; Anke Meyerdierks; Arantxa Peña; Ramon Rosselló-Mora; Rudolf Amann; Josefa Antón
Metagenomic approach to the study of halophages: the environmental halophage 1.
Environmental microbiology 2007;9(7):1711-23.
2007: Dagmar Woebken; Bernhard M Fuchs; Marcel M M Kuypers; Rudolf Amann
Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system.
Applied and environmental microbiology 2007;73(14):4648-57.
2007: Niculina Musat; Olav Giere; Armin Gieseke; Frank Thiermann; Rudolf Amann; Nicole Dubilier
Molecular and morphological characterization of the association between bacterial endosymbionts and the marine nematode Astomonema sp. from the Bahamas.
Environmental microbiology 2007;9(5):1345-53.
2007: Cecilia Alonso; Falk Warnecke; Rudolf Amann; Jakob Pernthaler
High local and global diversity of Flavobacteria in marine plankton.
Environmental microbiology 2007;9(5):1253-66.
2007: Tina Lösekann; Katrin Knittel; Thierry Nadalig; Bernhard Fuchs; Helge Niemann; Antje Boetius; Rudolf Amann
Diversity and abundance of aerobic and anaerobic methane oxidizers at the Haakon Mosby Mud Volcano, Barents Sea.
Applied and environmental microbiology 2007;73(10):3348-62.
2007: Phyllis Lam; Marlene M Jensen; Gaute Lavik; Daniel F McGinnis; Beat Müller; Carsten J Schubert; Rudolf Amann; Bo Thamdrup; Marcel M M Kuypers
Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(17):7104-9.
2007: Victor Soria-Carrasco; Maria Valens-Vadell; Arantxa Peña; Josefa Antón; Rudolf Amann; Jose Castresana; Ramon Rosselló-Mora
Phylogenetic position of Salinibacter ruber based on concatenated protein alignments.
Systematic and applied microbiology 2007;30(3):171-9.
2007: Bernhard M Fuchs; Stefan Spring; Hanno Teeling; Christian Quast; Jörg Wulf; Martha Schattenhofer; Shi Yan; Steve Ferriera; Justin Johnson; Frank Oliver Glöckner; Rudolf Amann
Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(8):2891-6.
2006: Margarete Bauer; Michael Kube; Hanno Teeling; Michael Richter; Thierry Lombardot; Elke Allers; Chris Würdemann; Christian Quast; Heiner Kuhl; Florian Knaust; Dagmar Woebken; Kerstin Bischof; Marc Mussmann; Jomuna V Choudhuri; Folker Meyer; Richard Reinhardt; Rudolf Amann; Frank Oliver Glöckner
Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter.
Environmental microbiology 2006;8(12):2201-13.
2006: Barbara J MacGregor; Rudolf Amann
Single-stranded conformational polymorphism for separation of mixed rRNAS (rRNA-SSCP): a new method for profiling microbial communities.
Systematic and applied microbiology 2006;29(8):661-70.
2006: Tanja Woyke; Hanno Teeling; Natalia N Ivanova; Marcel Huntemann; Michael Richter; Frank Oliver Gloeckner; Dario Boffelli; Iain J Anderson; Kerrie W Barry; Harris J Shapiro; Ernest Szeto; Nikos Kyrpides; Marc Mussmann; Rudolf Amann; Claudia Bergin; Caroline Ruehland; Edward M Rubin; Nicole Dubilier
Symbiosis insights through metagenomic analysis of a microbial consortium.
Nature 2006;443(7114):950-5.
2006: Helge Niemann; Tina Lösekann; Dirk de Beer; Marcus Elvert; Thierry Nadalig; Katrin Knittel; Rudolf Amann; Eberhard J Sauter; Michael Schlüter; Michael Klages; Jean Paul Foucher; Antje Boetius
Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink.
Nature 2006;443(7113):854-8.
2006: Anna Blazejak; Jan Kuever; Christer Erséus; Rudolf Amann; Nicole Dubilier
Phylogeny of 16S rRNA, ribulose 1,5-bisphosphate carboxylase/oxygenase, and adenosine 5'-phosphosulfate reductase genes from gamma- and alphaproteobacterial symbionts in gutless marine worms (oligochaeta) from Bermuda and the Bahamas.
Applied and environmental microbiology 2006;72(8):5527-36.
2006: Barbara J MacGregor; Henricus T S Boschker; Rudolf Amann
Comparison of rRNA and polar-lipid-derived fatty acid biomarkers for assessment of 13C-substrate incorporation by microorganisms in marine sediments.
Applied and environmental microbiology 2006;72(8):5246-53.
2006: Niculina Musat; Ursula Werner; Katrin Knittel; Steffen Kolb; Tanja Dodenhof; Justus E E van Beusekom; Dirk de Beer; Nicole Dubilier; Rudolf Amann
Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea.
Systematic and applied microbiology 2006;29(4):333-48.
2005: Anke Meyerdierks; Michael Kube; Thierry Lombardot; Katrin Knittel; Margarete Bauer; Frank Oliver Glöckner; Richard Reinhardt; Rudolf Amann
Insights into the genomes of archaea mediating the anaerobic oxidation of methane.
Environmental microbiology 2005;7(12):1937-51.
2005: Marc Mussmann; Michael Richter; Thierry Lombardot; Anke Meyerdierks; Jan Kuever; Michael Kube; Frank Oliver Glöckner; Rudolf Amann
Clustered genes related to sulfate respiration in uncultured prokaryotes support the theory of their concomitant horizontal transfer.
Journal of bacteriology 2005;187(20):7126-37.
2005: Dörte Gade; Dorothea Theiss; Daniela Lange; Ekaterina Mirgorodskaya; Thierry Lombardot; Frank Oliver Glöckner; Michael Kube; Richard Reinhardt; Rudolf Amann; Hans Lehrach; Ralf Rabus; Johan Gobom
Towards the proteome of the marine bacterium Rhodopirellula baltica: mapping the soluble proteins.
Proteomics 2005;5(14):3654-71.
2005: Armin Gieseke; Jeppe Lund Nielsen; Rudolf Amann; Per Halkjaer Nielsen; Dirk de Beer
In situ substrate conversion and assimilation by nitrifying bacteria in a model biofilm.
Environmental microbiology 2005;7(9):1392-404.
2005: Michael Kube; Alfred Beck; Anke Meyerdierks; Rudolf Amann; Richard Reinhardt; Ralf Rabus
A catabolic gene cluster for anaerobic benzoate degradation in methanotrophic microbial Black Sea mats.
Systematic and applied microbiology 2005;28(4):287-94.
2005: Marcel M M Kuypers; Gaute Lavik; Dagmar Woebken; Markus Schmid; Bernhard M Fuchs; Rudolf Amann; Bo Barker Jørgensen; Mike S.M. Jetten
Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(18):6478-83.
2005: Arantxa Peña; Maria Valens; Fernando Santos; Sandra Buczolits; Josefa Antón; Peter Kämpfer; Hans-Jürgen Busse; Rudolf Amann; Ramon Rosselló-Mora
Intraspecific comparative analysis of the species Salinibacter ruber.
Extremophiles : life under extreme conditions 2005;9(2):151-61.
2005: Sébastien Duperron; Thierry Nadalig; Jean-Claude Caprais; Myriam Sibuet; Aline Fiala-Médioni; Rudolf Amann; Nicole Dubilier
Dual symbiosis in a Bathymodiolus sp. mussel from a methane seep on the Gabon continental margin (Southeast Atlantic): 16S rRNA phylogeny and distribution of the symbionts in gills.
Applied and environmental microbiology 2005;71(4):1694-700.
2005: Katrin Knittel; Jan Kuever; Anke Meyerdierks; Ruth Meinke; Rudolf Amann; Thorsten Brinkhoff
Thiomicrospira arctica sp. nov. and Thiomicrospira psychrophila sp. nov., psychrophilic, obligately chemolithoautotrophic, sulfur-oxidizing bacteria isolated from marine Arctic sediments.
International journal of systematic and evolutionary microbiology 2005;55(Pt 2):781-6.
2005: Anna Blazejak; Christer Erséus; Rudolf Amann; Nicole Dubilier
Coexistence of bacterial sulfide oxidizers, sulfate reducers, and spirochetes in a gutless worm (Oligochaeta) from the Peru margin.
Applied and environmental microbiology 2005;71(3):1553-61.
2005: Marc Mussmann; Kousuke Ishii; Ralf Rabus; Rudolf Amann
Diversity and vertical distribution of cultured and uncultured Deltaproteobacteria in an intertidal mud flat of the Wadden Sea.
Environmental microbiology 2005;7(3):405-18.
2005: Yadhu Kumar; Ralf Westram; Sebastian Behrens; Bernhard Fuchs; Frank Oliver Glöckner; Rudolf Amann; Harald Meier; Wolfgang Ludwig
Graphical representation of ribosomal RNA probe accessibility data using ARB software package.
BMC bioinformatics 2005;6():61.
2005: Peter Kämpfer; Renate Schulze; Udo Jäckel; Khursheed A Malik; Rudolf Amann; Stefan Spring
Hydrogenophaga defluvii sp. nov. and Hydrogenophaga atypica sp. nov., isolated from activated sludge.
International journal of systematic and evolutionary microbiology 2005;55(Pt 1):341-4.
2005: Katrin Knittel; Tina Lösekann; Antje Boetius; Renate Kort; Rudolf Amann
Diversity and distribution of methanotrophic archaea at cold seeps.
Applied and environmental microbiology 2005;71(1):467-79.
2005: Thierry Lombardot; Margarete Bauer; Hanno Teeling; Rudolf Amann; Frank Oliver Glöckner
The transcriptional regulator pool of the marine bacterium Rhodopirellula baltica SH 1T as revealed by whole genome comparisons.
FEMS microbiology letters 2005;242(1):137-45.
2004: Kousuke Ishii; Marc Mussmann; Barbara J MacGregor; Rudolf Amann
An improved fluorescence in situ hybridization protocol for the identification of bacteria and archaea in marine sediments.
FEMS microbiology ecology 2004;50(3):203-13.
2004: Margarete Bauer; Thierry Lombardot; Hanno Teeling; Naomi L Ward; Rudolf Amann; Frank Oliver Glöckner
Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum.
Journal of molecular evolution 2004;59(5):571-86.
2004: Raju Sekar; Bernhard M Fuchs; Rudolf Amann; Jakob Pernthaler
Flow sorting of marine bacterioplankton after fluorescence in situ hybridization.
Applied and environmental microbiology 2004;70(10):6210-9.
2004: Jörg Peplies; Frank Oliver Glöckner; Rudolf Amann; Wolfgang Ludwig
Comparative sequence analysis and oligonucleotide probe design based on 23S rRNA genes of Alphaproteobacteria from North Sea bacterioplankton.
Systematic and applied microbiology 2004;27(5):573-80.
2004: Sebastian Behrens; Bernhard M Fuchs; Rudolf Amann
The effect of nucleobase-specific fluorescence quenching on in situ hybridization with rRNA-targeted oligonucleotide probes.
Systematic and applied microbiology 2004;27(5):565-72.
2004: Annelie Pernthaler; Rudolf Amann
Simultaneous fluorescence in situ hybridization of mRNA and rRNA in environmental bacteria.
Applied and environmental microbiology 2004;70(9):5426-33.
2004: Hanno Teeling; Anke Meyerdierks; Margarete Bauer; Rudolf Amann; Frank Oliver Glöckner
Application of tetranucleotide frequencies for the assignment of genomic fragments.
Environmental microbiology 2004;6(9):938-47.
2004: Ralf Rabus; Andreas Ruepp; Tancred Frickey; Thomas Rattei; Berthold Fartmann; M Stark; Margarete Bauer; Arne Zibat; Thierry Lombardot; I Becker; J Amann; K Gellner; Hanno Teeling; W D Leuschner; Frank Oliver Glöckner; A N Lupas; Rudolf Amann; Hans-Peter Klenk
The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments.
Environmental microbiology 2004;6(9):887-902.
2004: D Altmann; Peter Stief; Rudolf Amann; Dirk de Beer
Nitrification in freshwater sediments as influenced by insect larvae: quantification by microsensors and fluorescence in situ hybridization.
Microbial ecology 2004;48(2):145-53.
2004: Jörg Peplies; Stanley C K Lau; Jakob Pernthaler; Rudolf Amann; Frank Oliver Glöckner
Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.
Environmental microbiology 2004;6(6):638-45.
2004: Dörte Gade; Heinz Schlesner; Frank Oliver Glöckner; Rudolf Amann; S Pfeiffer; Michael Thomm
Identification of planctomycetes with order-, genus-, and strain-specific 16S rRNA-targeted probes.
Microbial ecology 2004;47(3):243-51.
2004: Falk Warnecke; Rudolf Amann; Jakob Pernthaler
Actinobacterial 16S rRNA genes from freshwater habitats cluster in four distinct lineages.
Environmental microbiology 2004;6(3):242-53.
2003: Martin Krüger; Anke Meyerdierks; Frank Oliver Glöckner; Rudolf Amann; Friedrich Widdel; Michael Kube; Richard Reinhardt; Jörg Kahnt; Reinhard Böcher; Rudolf K Thauer; Seigo Shima
A conspicuous nickel protein in microbial mats that oxidize methane anaerobically.
Nature 2003;426(6968):878-81.
2003: Dörte Altmann; Peter Stief; Rudolf Amann; Dirk de Beer; Andreas Schramm
In situ distribution and activity of nitrifying bacteria in freshwater sediment.
Environmental microbiology 2003;5(9):798-803.
2003: Sebastian Behrens; Bernhard M Fuchs; Florian Mueller; Rudolf Amann
Is the in situ accessibility of the 16S rRNA of Escherichia coli for Cy3-labeled oligonucleotide probes predicted by a three-dimensional structure model of the 30S ribosomal subunit?
Applied and environmental microbiology 2003;69(8):4935-41.
2003: Frank Oliver Glöckner; Michael Kube; Margarete Bauer; Hanno Teeling; Thierry Lombardot; Wolfgang Ludwig; Dörte Gade; Alfred Beck; Katja Borzym; K Heitmann; Ralf Rabus; Heinz Schlesner; Rudolf Amann; Richard Reinhardt
Complete genome sequence of the marine planctomycete Pirellula sp. strain 1.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(14):8298-303.
2003: Marc Mussmann; Heide N Schulz-Vogt; Bettina Strotmann; Thomas Kjaer; Lars P Nielsen; Ramon Rosselló-Mora; Rudolf Amann; Bo Barker Jørgensen
Phylogeny and distribution of nitrate-storing Beggiatoa spp. in coastal marine sediments.
Environmental microbiology 2003;5(6):523-33.
2003: Raju Sekar; Annelie Pernthaler; Jakob Pernthaler; Falk Warnecke; Thomas Posch; Rudolf Amann
An improved protocol for quantification of freshwater Actinobacteria by fluorescence in situ hybridization.
Applied and environmental microbiology 2003;69(5):2928-35.
2003: João Inácio; Sebastian Behrens; Bernhard M Fuchs; Alvaro Fonseca; Isabel Spencer-Martins; Rudolf Amann
In situ accessibility of Saccharomyces cerevisiae 26S rRNA to Cy3-labeled oligonucleotide probes comprising the D1 and D2 domains.
Applied and environmental microbiology 2003;69(5):2899-905.
2003: Jakob Pernthaler; Annelie Pernthaler; Rudolf Amann
Automated enumeration of groups of marine picoplankton after fluorescence in situ hybridization.
Applied and environmental microbiology 2003;69(5):2631-7.
2003: Christine Beardsley; Jakob Pernthaler; Werner Wosniok; Rudolf Amann
Are readily culturable bacteria in coastal North Sea waters suppressed by selective grazing mortality?
Applied and environmental microbiology 2003;69(5):2624-30.
2003: Armin Gieseke; Lotte Bjerrum; Michael Wagner; Rudolf Amann
Structure and activity of multiple nitrifying bacterial populations co-existing in a biofilm.
Environmental microbiology 2003;5(5):355-69.
2003: Sebastian Behrens; Caroline Rühland; João Inácio; Harald Huber; Alvaro Fonseca; Isabel Spencer-Martins; Bernhard M Fuchs; Rudolf Amann
In situ accessibility of small-subunit rRNA of members of the domains Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes.
Applied and environmental microbiology 2003;69(3):1748-58.
2003: Jörg Peplies; Frank Oliver Glöckner; Rudolf Amann
Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes.
Applied and environmental microbiology 2003;69(3):1397-407.
2003: Mikhail V Zubkov; Bernhard M Fuchs; Glen A Tarran; Peter H Burkill; Rudolf Amann
High rate of uptake of organic nitrogen compounds by Prochlorococcus cyanobacteria as a key to their dominance in oligotrophic oceanic waters.
Applied and environmental microbiology 2003;69(2):1299-304.
2002: Annelie Pernthaler; Jakob Pernthaler; Martha Schattenhofer; Rudolf Amann
Identification of DNA-synthesizing bacterial cells in coastal North Sea plankton.
Applied and environmental microbiology 2002;68(11):5728-36.
2002: walter Michaelis; Richard Seifert; Katja Nauhaus; Tina Treude; Volker Thiel; Martin Blumenberg; Katrin Knittel; Armin Gieseke; Katharina Peterknecht; Thomas Pape; Antje Boetius; Rudolf Amann; Bo Barker Jørgensen; Friedrich Widdel; Jörn Peckmann; Nikolai V Pimenov; Maksim B Gulin
Microbial reefs in the Black Sea fueled by anaerobic oxidation of methane.
Science (New York, N.Y.) 2002;297(5583):1013-5.
2002: Barbara J MacGregor; Volker Brüchert; Swantje Fleischer; Rudolf Amann
Isolation of small-subunit rRNA for stable isotopic characterization.
Environmental microbiology 2002;4(8):451-64.
2002: Ralf Rabus; Dörte Gade; Roger Helbig; Margarete Bauer; Frank Oliver Glöckner; Michael Kube; Heinz Schlesner; Richard Reinhardt; Rudolf Amann
Analysis of N-acetylglucosamine metabolism in the marine bacterium Pirellula sp. strain 1 by a proteomic approach.
Proteomics 2002;2(6):649-55.
2002: Annelie Pernthaler; Jakob Pernthaler; Rudolf Amann
Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria.
Applied and environmental microbiology 2002;68(6):3094-101.
2002: Emilio O Casamayor; Carlos Pedrós-Alió; Gerard Muyzer; Rudolf Amann
Microheterogeneity in 16S ribosomal DNA-defined bacterial populations from a stratified planktonic environment is related to temporal changes and to ecological adaptations.
Applied and environmental microbiology 2002;68(4):1706-14.
2002: Josefa Antón; Aharon Oren; Susana Benlloch; Francisco Rodríguez-Valera; Rudolf Amann; Ramon Rosselló-Mora
Salinibacter ruber gen. nov., sp. nov., a novel, extremely halophilic member of the Bacteria from saltern crystallizer ponds.
International journal of systematic and evolutionary microbiology 2002;52(Pt 2):485-91.
2002: Annelie Pernthaler; Christina M Preston; Jakob Pernthaler; Edward F DeLong; Rudolf Amann
Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea.
Applied and environmental microbiology 2002;68(2):661-7.
2002: Rudolf Amann
Think big: the international dimension of environmental microbiology.
Environmental microbiology 2002;4(1):3.
2001: Mikhail V Zubkov; Bernhard M Fuchs; Peter H Burkill; Rudolf Amann
Comparison of cellular and biomass specific activities of dominant bacterioplankton groups in stratified waters of the Celtic Sea.
Applied and environmental microbiology 2001;67(11):5210-8.
2001: H Eilers; Jakob Pernthaler; Jörg Peplies; Frank Oliver Glöckner; Gunnar Gerdts; Rudolf Amann
Isolation of novel pelagic bacteria from the German bight and their seasonal contributions to surface picoplankton.
Applied and environmental microbiology 2001;67(11):5134-42.
2001: WA Schönhuber; G Le Bourhis; J Tremblay; Rudolf Amann; S Kulakauskas
Utilization of tmRNA sequences for bacterial identification.
BMC microbiology 2001;1():20.
2001: Annelie Pernthaler; Jakob Pernthaler; H Eilers; Rudolf Amann
Growth patterns of two marine isolates: adaptations to substrate patchiness?
Applied and environmental microbiology 2001;67(9):4077-83.
2001: Nyree J West; WA Schönhuber; Nicholas J Fuller; Rudolf Amann; Rosmarie Rippka; Anton F Post; David J Scanlan
Closely related Prochlorococcus genotypes show remarkably different depth distributions in two oceanic regions as revealed by in situ hybridization using 16S rRNA-targeted oligonucleotides.
Microbiology (Reading, England) 2001;147(Pt 7):1731-44.
2001: Rudolf Amann; B M Fuchs; S Behrens
The identification of microorganisms by fluorescence in situ hybridisation.
Current opinion in biotechnology 2001;12(3):231-6.
2001: Karel Simek; Jakob Pernthaler; Markus G Weinbauer; Karel Hornák; John R Dolan; Jirí Nedoma; Michal Masín; Rudolf Amann
Changes in bacterial community composition and dynamics and viral mortality rates associated with enhanced flagellate grazing in a mesoeutrophic reservoir.
Applied and environmental microbiology 2001;67(6):2723-33.
2001: Nicole Dubilier; C Mülders; T Ferdelman; Dirk de Beer; Annelie Pernthaler; M Klein; M Wagner; Christer Erséus; F Thiermann; J Krieger; O Giere; Rudolf Amann
Endosymbiotic sulphate-reducing and sulphide-oxidizing bacteria in an oligochaete worm.
Nature 2001;411(6835):298-302.
2001: Mikhail V Zubkov; Bernhard M Fuchs; S D Archer; R P Kiene; Rudolf Amann; Peter H Burkill
Linking the composition of bacterioplankton to rapid turnover of dissolved dimethylsulphoniopropionate in an algal bloom in the North Sea.
Environmental microbiology 2001;3(5):304-11.
2001: Jakob Pernthaler; Thomas Posch; Karel Simek; Jaroslav Vrba; Annelie Pernthaler; Frank Oliver Glöckner; Ulrich Nübel; Roland Psenner; Rudolf Amann
Predator-specific enrichment of actinobacteria from a cosmopolitan freshwater clade in mixed continuous culture.
Applied and environmental microbiology 2001;67(5):2145-55.
2001: Armin Gieseke; U Purkhold; M Wagner; Rudolf Amann; Andreas Schramm
Community structure and activity dynamics of nitrifying bacteria in a phosphate-removing biofilm.
Applied and environmental microbiology 2001;67(3):1351-62.
2001: Bernhard M Fuchs; K Syutsubo; Wolfgang Ludwig; Rudolf Amann
In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes.
Applied and environmental microbiology 2001;67(2):961-8.
2001: WA Schönhuber; G Le Bourhis; J Tremblay; Rudolf Amann; S Kulakauskas
Utilization of tmRNA sequences for bacterial identification.
BMC microbiology 2001;1():20.
2001: K Ravenschlag; K Sahm; Rudolf Amann
Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard).
Applied and environmental microbiology 2001;67(1):387-95.
2000: Andreas Schramm; Dirk de Beer; Armin Gieseke; Rudolf Amann
Microenvironments and distribution of nitrifying bacteria in a membrane-bound biofilm.
Environmental microbiology 2000;2(6):680-6.
2000: G Amann; Karl O Stetter; E Llobet-Brossa; Rudolf Amann; Josefa Antón
Direct proof for the presence and expression of two 5% different 16S rRNA genes in individual cells of Haloarcula marismortui.
Extremophiles : life under extreme conditions 2000;4(6):373-6.
2000: Frank Oliver Glöckner; E Zaichikov; N Belkova; L Denissova; Jakob Pernthaler; Annelie Pernthaler; Rudolf Amann
Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria.
Applied and environmental microbiology 2000;66(11):5053-65.
2000: H Eilers; Jakob Pernthaler; Rudolf Amann
Succession of pelagic marine bacteria during enrichment: a close look at cultivation-induced shifts.
Applied and environmental microbiology 2000;66(11):4634-40.
2000: Antje Boetius; K Ravenschlag; Carsten J Schubert; D Rickert; Friedrich Widdel; Armin Gieseke; Rudolf Amann; Bo Barker Jørgensen; U Witte; O Pfannkuche
A marine microbial consortium apparently mediating anaerobic oxidation of methane.
Nature 2000;407(6804):623-6.
2000: Bernhard M Fuchs; Frank Oliver Glöckner; Jörg Wulf; Rudolf Amann
Unlabeled helper oligonucleotides increase the in situ accessibility to 16S rRNA of fluorescently labeled oligonucleotide probes.
Applied and environmental microbiology 2000;66(8):3603-7.
2000: K Ravenschlag; K Sahm; Christian Knoblauch; Bo Barker Jørgensen; Rudolf Amann
Community structure, cellular rRNA content, and activity of sulfate-reducing bacteria in marine arctic sediments.
Applied and environmental microbiology 2000;66(8):3592-602.
2000: Josefa Antón; Ramon Rosselló-Mora; Francisco Rodríguez-Valera; Rudolf Amann
Extremely halophilic bacteria in crystallizer ponds from solar salterns.
Applied and environmental microbiology 2000;66(7):3052-7.
2000: H Eilers; Jakob Pernthaler; Frank Oliver Glöckner; Rudolf Amann
Culturability and In situ abundance of pelagic bacteria from the North Sea.
Applied and environmental microbiology 2000;66(7):3044-51.
2000: Bo Thamdrup; Ramon Rosselló-Mora; Rudolf Amann
Microbial manganese and sulfate reduction in Black Sea shelf sediments.
Applied and environmental microbiology 2000;66(7):2888-97.
2000: Bernhard M Fuchs; Mikhail V Zubkov; K Sahm; Peter H Burkill; Rudolf Amann
Changes in community composition during dilution cultures of marine bacterioplankton as assessed by flow cytometric and molecular biological techniques.
Environmental microbiology 2000;2(2):191-201.
2000: R Weller; Frank Oliver Glöckner; Rudolf Amann
16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides.
Systematic and applied microbiology 2000;23(1):107-14.
2000: Rudolf Amann
Who is out there? Microbial aspects of biodiversity.
Systematic and applied microbiology 2000;23(1):1-8.
1999: Josefa Antón; E Llobet-Brossa; Francisco Rodríguez-Valera; Rudolf Amann
Fluorescence in situ hybridization analysis of the prokaryotic community inhabiting crystallizer ponds.
Environmental microbiology 1999;1(6):517-23.
1999: Holger Daims; A Brühl; Rudolf Amann; Karl-Heinz Schleifer; Michael Wagner
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.
Systematic and applied microbiology 1999;22(3):434-44.
1999: Andreas Schramm; Cecilia M Santegoeds; H K Nielsen; H Ploug; M Wagner; M Pribyl; J Wanner; Rudolf Amann; Dirk de Beer
On the occurrence of anoxic microniches, denitrification, and sulfate reduction in aerated activated sludge.
Applied and environmental microbiology 1999;65(9):4189-96.
1999: K Ravenschlag; K Sahm; J Pernthaler; Rudolf Amann
High bacterial diversity in permanently cold marine sediments.
Applied and environmental microbiology 1999;65(9):3982-9.
1999: K Sahm; Christian Knoblauch; Rudolf Amann
Phylogenetic affiliation and quantification of psychrophilic sulfate-reducing isolates in marine Arctic sediments.
Applied and environmental microbiology 1999;65(9):3976-81.
1999: Frank Oliver Glöckner; Bernhard M Fuchs; Rudolf Amann
Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization.
Applied and environmental microbiology 1999;65(8):3721-6.
1999: Andreas Schramm; Dirk de Beer; J C van den Heuvel; SP Ottengraf; Rudolf Amann
Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: quantification by in situ hybridization and the use of microsensors.
Applied and environmental microbiology 1999;65(8):3690-6.
1999: Mikhail V Zubkov; Bernhard M Fuchs; H Eilers; Peter H Burkill; Rudolf Amann
Determination of total protein content of bacterial cells by SYPRO staining and flow cytometry.
Applied and environmental microbiology 1999;65(7):3251-7.
1999: Ramon Rosselló-Mora; Bo Thamdrup; H Schäfer; R Weller; Rudolf Amann
The response of the microbial community of marine sediments to organic carbon input under anaerobic conditions.
Systematic and applied microbiology 1999;22(2):237-48.
1999: R Schulze; Stefan Spring; Rudolf Amann; I Huber; Wolfgang Ludwig; Karl-Heinz Schleifer; Peter Kämpfer
Genotypic diversity of Acidovorax strains isolated from activated sludge and description of Acidovorax defluvii sp. nov.
Systematic and applied microbiology 1999;22(2):205-14.
1999: H Meier; Rudolf Amann; Wolfgang Ludwig; Karl-Heinz Schleifer
Specific oligonucleotide probes for in situ detection of a major group of gram-positive bacteria with low DNA G + C content.
Systematic and applied microbiology 1999;22(2):186-96.
1999: Ralf Rabus; Heinz Wilkes; A Schramm; G Harms; Astrid Behrends; Rudolf Amann; Friedrich Widdel
Anaerobic utilization of alkylbenzenes and n-alkanes from crude oil in an enrichment culture of denitrifying bacteria affiliating with the beta-subclass of Proteobacteria.
Environmental microbiology 1999;1(2):145-57.
1999: WA Schönhuber; B Zarda; S Eix; Rosmarie Rippka; M Herdman; Wolfgang Ludwig; Rudolf Amann
In situ identification of cyanobacteria with horseradish peroxidase-labeled, rRNA-targeted oligonucleotide probes.
Applied and environmental microbiology 1999;65(3):1259-67.
1999: Frank Oliver Glöckner; H D Babenzien; Jörg Wulf; Rudolf Amann
Phylogeny and diversity of Achromatium oxaliferum.
Systematic and applied microbiology 1999;22(1):28-38.
1999: Stefan Juretschko; WA Schönhuber; S Kulakauskas; D S Ehrlich; Karl-Heinz Schleifer; Rudolf Amann
In situ detection of Escherichia coli cells containing ColE1-related plasmids by hybridization to regulatory RNA II.
Systematic and applied microbiology 1999;22(1):1-8.
1998: Alexander Neef; Rudolf Amann; H Schlesner; K H Schleifer
Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes.
Microbiology (Reading, England) 1998;144 ( Pt 12)():3257-66.
1998: Bernhard M Fuchs; G Wallner; Wolfgang Beisker; I Schwippl; Wolfgang Ludwig; Rudolf Amann
Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes.
Applied and environmental microbiology 1998;64(12):4973-82.
1998: A Schramm; D De Beer; M Wagner; Rudolf Amann
Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor.
Applied and environmental microbiology 1998;64(9):3480-5.
1998: Edith Frahm; I Heiber; S Hoffmann; C Koob; Harald Meier; Wolfgang Ludwig; Rudolf Amann; Karl-Heinz Schleifer; Ursula Obst
Application of 23S rDNA-targeted oligonucleotide probes specific for enterococci to water hygiene control.
Systematic and applied microbiology 1998;21(3):450-3.
1998: Frank Oliver Glöckner; H D Babenzien; Rudolf Amann
Phylogeny and identification in situ of Nevskia ramosa.
Applied and environmental microbiology 1998;64(5):1895-901.
1998: M Stoffels; Rudolf Amann; Wolfgang Ludwig; D Hekmat; Karl-Heinz Schleifer
Bacterial community dynamics during start-up of a trickle-bed bioreactor degrading aromatic compounds.
Applied and environmental microbiology 1998;64(3):930-9.
1998: Stefan Spring; Ulysses Lins; Rudolf Amann; Karl-Heinz Schleifer; L C Ferreira; D M Esquivel; M Farina
Phylogenetic affiliation and ultrastructure of uncultured magnetic bacteria with unusually large magnetosomes.
Archives of microbiology 1998;169(2):136-47.
1998: Rolf Michel; Karl-Dieter Müller; Rudolf Amann; EN Schmid
Legionella-like slender rods multiplying within a strain of Acanthamoeba sp. isolated from drinking water.
Parasitology research 1998;84(1):84-8.
1997: G Wallner; B Fuchs; Stefan Spring; Wolfgang Beisker; Rudolf Amann
Flow sorting of microorganisms for molecular analysis.
Applied and environmental microbiology 1997;63(11):4223-31.
1997: WA Schönhuber; B Fuchs; Stefan Juretschko; Rudolf Amann
Improved sensitivity of whole-cell hybridization by the combination of horseradish peroxidase-labeled oligonucleotides and tyramide signal amplification.
Applied and environmental microbiology 1997;63(8):3268-73.
1997: J Snaidr; Rudolf Amann; I Huber; Wolfgang Ludwig; Karl-Heinz Schleifer
Phylogenetic analysis and in situ identification of bacteria in activated sludge.
Applied and environmental microbiology 1997;63(7):2884-96.
1997: Rudolf Amann; N Springer; WA Schönhuber; Wolfgang Ludwig; EN Schmid; Karl-Dieter Müller; Rolf Michel
Obligate intracellular bacterial parasites of acanthamoebae related to Chlamydia spp.
Applied and environmental microbiology 1997;63(1):115-21.
1996: Alexander Neef; A Zaglauer; H Meier; Rudolf Amann; H Lemmer; Karl-Heinz Schleifer
Population analysis in a denitrifying sand filter: conventional and in situ identification of Paracoccus spp. in methanol-fed biofilms.
Applied and environmental microbiology 1996;62(12):4329-39.
1996: Rudolf Amann; J Snaidr; M Wagner; Wolfgang Ludwig; Karl-Heinz Schleifer
In situ visualization of high genetic diversity in a natural microbial community.
Journal of bacteriology 1996;178(12):3496-500.
1996: Werner Manz; Rudolf Amann; Wolfgang Ludwig; M Vancanneyt; Karl-Heinz Schleifer
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment.
Microbiology (Reading, England) 1996;142 ( Pt 5)():1097-106.
1996: N Springer; Rudolf Amann; Wolfgang Ludwig; Karl-Heinz Schleifer; H Schmidt
Polynucleobacter necessarius, an obligate bacterial endosymbiont of the hypotrichous ciliate Euplotes aediculatus, is a member of the beta-subclass of Proteobacteria.
FEMS microbiology letters 1996;135(2-3):333-6.
1995: G Wallner; R Erhart; Rudolf Amann
Flow cytometric analysis of activated sludge with rRNA-targeted probes.
Applied and environmental microbiology 1995;61(5):1859-66.
1995: R A Rosselló-Mora; Michael Wagner; Rudolf Amann; Karl-Heinz Schleifer
The abundance of Zoogloea ramigera in sewage treatment plants.
Applied and environmental microbiology 1995;61(2):702-7.
1995: Werner Manz; Rudolf Amann; R Szewzyk; Ulrich Szewzyk; T A Stenström; P Hutzler; Karl-Heinz Schleifer
In situ identification of Legionellaceae using 16S rRNA-targeted oligonucleotide probes and confocal laser scanning microscopy.
Microbiology (Reading, England) 1995;141 ( Pt 1)():29-39.
1994: Carsten Roller; M Wagner; Rudolf Amann; Wolfgang Ludwig; Karl-Heinz Schleifer
In situ probing of gram-positive bacteria with high DNA G + C content using 23S rRNA-targeted oligonucleotides.
Microbiology (Reading, England) 1994;140 ( Pt 10)():2849-58.
1994: K Trebesius; Rudolf Amann; Wolfgang Ludwig; K Mühlegger; Karl-Heinz Schleifer
Identification of Whole Fixed Bacterial Cells with Nonradioactive 23S rRNA-Targeted Polynucleotide Probes.
Applied and environmental microbiology 1994;60(9):3228-35.
1994: Michael Wagner; R Erhart; Werner Manz; Rudolf Amann; H Lemmer; D Wedi; Karl-Heinz Schleifer
Development of an rRNA-targeted oligonucleotide probe specific for the genus Acinetobacter and its application for in situ monitoring in activated sludge.
Applied and environmental microbiology 1994;60(3):792-800.
1993: N Springer; Wolfgang Ludwig; Rudolf Amann; H J Schmidt; Hans-Dieter Görtz; Karl-Heinz Schleifer
Occurrence of fragmented 16S rRNA in an obligate bacterial endosymbiont of Paramecium caudatum.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(21):9892-5.
1993: D Hahn; Rudolf Amann; Josef Zeyer
Detection of mRNA in streptomyces cells by whole-cell hybridization with digoxigenin-labeled probes.
Applied and environmental microbiology 1993;59(8):2753-7.
1993: Stefan Spring; Rudolf Amann; Wolfgang Ludwig; Karl-Heinz Schleifer; H van Gemerden; N Petersen
Dominating role of an unusual magnetotactic bacterium in the microaerobic zone of a freshwater sediment.
Applied and environmental microbiology 1993;59(8):2397-403.
1993: Werner Manz; Ulrich Szewzyk; P Ericsson; Rudolf Amann; Karl-Heinz Schleifer; T A Stenström
In situ identification of bacteria in drinking water and adjoining biofilms by hybridization with 16S and 23S rRNA-directed fluorescent oligonucleotide probes.
Applied and environmental microbiology 1993;59(7):2293-8.
1993: D Hahn; Rudolf Amann; Josef Zeyer
Whole-Cell Hybridization of Frankia Strains with Fluorescence- or Digoxigenin-Labeled, 16S rRNA-Targeted Oligonucleotide Probes.
Applied and environmental microbiology 1993;59(6):1709-16.
1993: Michael Wagner; Rudolf Amann; H Lemmer; Karl-Heinz Schleifer
Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure.
Applied and environmental microbiology 1993;59(5):1520-5.
1993: G Wallner; Rudolf Amann; Wolfgang Beisker
Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms.
Cytometry 1993;14(2):136-43.
1992: N Springer; Wolfgang Ludwig; W Drozański; Rudolf Amann; Karl-Heinz Schleifer
The phylogenetic status of Sarcobium lyticum, an obligate intracellular bacterial parasite of small amoebae.
FEMS microbiology letters 1992;75(2-3):199-202.
1991: B Zarda; Rudolf Amann; G Wallner; Karl-Heinz Schleifer
Identification of single bacterial cells using digoxigenin-labelled, rRNA-targeted oligonucleotides.
Journal of general microbiology 1991;137(12):2823-30.
1991: Rudolf Amann; N Springer; Wolfgang Ludwig; Hans-Dieter Görtz; Karl-Heinz Schleifer
Identification in situ and phylogeny of uncultured bacterial endosymbionts.
Nature 1991;351(6322):161-4.
1988: Rudolf Amann; Wolfgang Ludwig; Karl-Heinz Schleifer
Beta-subunit of ATP-synthase: a useful marker for studying the phylogenetic relationship of eubacteria.
Journal of general microbiology 1988;134(10):2815-21.