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Xing Wang Deng
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32
Wei, Ning
12
Serino, Giovanna
10
Ma, Ligeng
10
Matsui, Minami
9
wang, xiangfeng
8
von Arnim, Albrecht
8
Ma, Ligeng
8
Li, Lei
7
Gusmaroli, Giuliana
7
Kwok, Shing
7
Osterlund, MT
7
Rubio, Vicente
7
Feng, Suhua
7
Wang, Haiyang
7
Zhao, Hongyu
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All Publications
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2009: Elling Axel A; Deng Xing Wang
Next-generation sequencing reveals complex relationships between the epigenome and transcriptome in maize.
Plant signaling & behavior 2009;4(8):760-2.
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2009: Wang Feng; Zhu Danmeng; Huang Xi; Li Shuang; Gong Yinan; Yao Qinfang; Fu Xiangdong; Fan Liu-Min; Deng Xing Wang
Biochemical insights on degradation of Arabidopsis DELLA proteins gained from a cell-free assay system.
The Plant cell 2009;21(8):2378-90.
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2009: Wang Xiangfeng; Elling Axel A; Li Xueyong; Li Ning; Peng Zhiyu; He Guangming; Sun Hui; Qi Yijun; Liu X Shirley; Deng Xing Wang
Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize.
The Plant cell 2009;21(4):1053-69.
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2009: Lau On Sun; Deng Xing Wang
Effect of Arabidopsis COP10 ubiquitin E2 enhancement activity across E2 families and functional conservation among its canonical homologues.
The Biochemical journal 2009;418(3):683-90.
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2009: Shen Yunping; Zhou Zhenzhen; Feng Suhua; Li Jigang; Tan-Wilson Anna; Qu Li-Jia; Wang Haiyang; Deng Xing Wang
Phytochrome A mediates rapid red light-induced phosphorylation of Arabidopsis FAR-RED ELONGATED HYPOCOTYL1 in a low fluence response.
The Plant cell 2009;21(2):494-506.
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2009: Jiao Yuling; Tausta S Lori; Gandotra Neeru; Sun Ning; Liu Tie; Clay Nicole K; Ceserani Teresa; Chen Meiqin; Ma Ligeng; Holford Matthew; Zhang Hui-yong; Zhao Hongyu; Deng Xing-Wang; Nelson Timothy
A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies.
Nature genetics 2009;41(2):258-63.
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2008: Wei Ning; Serino Giovanna; Deng Xing-Wang
The COP9 signalosome: more than a protease.
Trends in biochemical sciences 2008;33(12):592-600.
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2008: Yin Ben-Liang; Guo Lan; Zhang Dong-Fen; Terzaghi William; Wang Xiang-Feng; Liu Ting-Ting; He Hang; Cheng Zhu-Kuan; Deng Xing Wang
Integration of cytological features with molecular and epigenetic properties of rice chromosome 4.
Molecular plant 2008;1(5):816-29.
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2008: Zhang Hui-Yong; He Hang; Chen Liang-Bi; Li Lei; Liang Man-Zhong; Wang Xiang-Feng; Liu Xi-Gang; He Guang-Ming; Chen Run-Sheng; Ma Li-Geng; Deng Xing Wang
A Genome-Wide Transcription Analysis Reveals a Close Correlation of Promoter INDEL Polymorphism and Heterotic Gene Expression in Rice Hybrids.
Molecular plant 2008;1(5):720-31.
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2008: Zhu Danmeng; Maier Alexander; Lee Jae-Hoon; Laubinger Sascha; Saijo Yusuke; Wang Haiyang; Qu Li-Jia; Hoecker Ute; Deng Xing Wang
Biochemical characterization of Arabidopsis complexes containing CONSTITUTIVELY PHOTOMORPHOGENIC1 and SUPPRESSOR OF PHYA proteins in light control of plant development.
The Plant cell 2008;20(9):2307-23.
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2008: Saijo Yusuke; Zhu Danmeng; Li Jigang; Rubio Vicente; Zhou Zhenzhen; Shen Yunping; Hoecker Ute; Wang Haiyang; Deng Xing Wang
Arabidopsis COP1/SPA1 complex and FHY1/FHY3 associate with distinct phosphorylated forms of phytochrome A in balancing light signaling.
Molecular cell 2008;31(4):607-13.
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2008: Guo Lan; Zhou Junli; Elling Axel A; Charron Jean-Benoit F; Deng Xing Wang
Histone modifications and expression of light-regulated genes in Arabidopsis are cooperatively influenced by changing light conditions.
Plant physiology 2008;147(4):2070-83.
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2008: Zhang Yu; Feng Suhua; Chen Fangfang; Chen Haodong; Wang Jia; McCall Chad; Xiong Yue; Deng Xing Wang
Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes.
The Plant cell 2008;20(6):1437-55.
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2008: Li Xueyong; Wang Xiangfeng; He Kun; Ma Yeqin; Su Ning; He Hang; Stolc Viktor; Tongprasit Waraporn; Jin Weiwei; Jiang Jiming; Terzaghi William; Li Songgang; Deng Xing Wang
High-resolution mapping of epigenetic modifications of the rice genome uncovers interplay between DNA methylation, histone methylation, and gene expression.
The Plant cell 2008;20(2):259-76.
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2008: Lee Jae-Hoon; Terzaghi William; Gusmaroli Giuliana; Charron Jean-Benoit F; Yoon Hye-Jin; Chen Haodong; He Yizhou Joseph; Xiong Yue; Deng Xing Wang
Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases.
The Plant cell 2008;20(1):152-67.
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2008: Feng Suhua; Martinez Cristina; Gusmaroli Giuliana; Wang Yu; Zhou Junli; Wang Feng; Chen Liying; Yu Lu; Iglesias-Pedraz Juan M; Kircher Stefan; Schäfer Eberhard; Fu Xiangdong; Fan Liu-Min; Deng Xing Wang
Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.
Nature 2008;451(7177):475-9.
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2008: Li Lei; He Hang; Zhang Juan; Wang Xiangfeng; Bai Sulan; Stolc Viktor; Tongprasit Waraporn; Young Nevin D; Yu Oliver; Deng Xing-Wang
Transcriptional analysis of highly syntenic regions between Medicago truncatula and Glycine max using tiling microarrays.
Genome biology 2008;9(3):R57.
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2007: Menon Suchithra; Chi Hongbo; Zhang Huiyong; Deng Xing Wang; Flavell Richard A; Wei Ning
COP9 signalosome subunit 8 is essential for peripheral T cell homeostasis and antigen receptor-induced entry into the cell cycle from quiescence.
Nature immunology 2007;8(11):1236-45.
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2007: Pick Elah; Lau On-Sun; Tsuge Tomohiko; Menon Suchithra; Tong Yingchun; Dohmae Naoshi; Plafker Scott M; Deng Xing Wang; Wei Ning
Mammalian DET1 regulates Cul4A activity and forms stable complexes with E2 ubiquitin-conjugating enzymes.
Molecular and cellular biology 2007;27(13):4708-19.
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2007: Qin Genji; Gu Hongya; Ma Ligeng; Peng Yiben; Deng Xing Wang; Chen Zhangliang; Qu Li-Jia
Disruption of phytoene desaturase gene results in albino and dwarf phenotypes in Arabidopsis by impairing chlorophyll, carotenoid, and gibberellin biosynthesis.
Cell research 2007;17(5):471-82.
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2007: Lee Jungeun; He Kun; Stolc Viktor; Lee Horim; Figueroa Pablo; Gao Ying; Tongprasit Waraporn; Zhao Hongyu; Lee Ilha; Deng Xing Wang
Analysis of transcription factor HY5 genomic binding sites revealed its hierarchical role in light regulation of development.
The Plant cell 2007;19(3):731-49.
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2007: Jiao Yuling; Lau On Sun; Deng Xing Wang
Light-regulated transcriptional networks in higher plants.
Nature reviews. Genetics 2007;8(3):217-30.
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2007: Zhou Junli; Wang Xiangfeng; Jiao Yuling; Qin Yonghua; Liu Xigang; He Kun; Chen Chen; Ma Ligeng; Wang Jian; Xiong Lizhong; Zhang Qifa; Fan Liumin; Deng Xing Wang
Global genome expression analysis of rice in response to drought and high-salinity stresses in shoot, flag leaf, and panicle.
Plant molecular biology 2007;63(5):591-608.
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2007: Gusmaroli Giuliana; Figueroa Pablo; Serino Giovanna; Deng Xing Wang
Role of the MPN subunits in COP9 signalosome assembly and activity, and their regulatory interaction with Arabidopsis Cullin3-based E3 ligases.
The Plant cell 2007;19(2):564-81.
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2007: Su Ning; He Kun; Jiao Yuling; Chen Chen; Zhou Junli; Li Lei; Bai Sulan; Li Xueyong; Deng Xing Wang
Distinct reorganization of the genome transcription associates with organogenesis of somatic embryo, shoots, and roots in rice.
Plant molecular biology 2007;63(3):337-49.
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2007: Bai Su-Lan; Zhong Xiaobo; Ma Ligeng; Zheng Wenjie; Fan Liu-Min; Wei Ning; Deng Xing Wang
A simple and reliable assay for detecting specific nucleotide sequences in plants using optical thin-film biosensor chips.
The Plant journal : for cell and molecular biology 2007;49(2):354-66.
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2007: Jiao Yuling; Deng Xing Wang
A genome-wide transcriptional activity survey of rice transposable element-related genes.
Genome biology 2007;8(2):R28.
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2006: Wang Xiangfeng; He Hang; Li Lei; Chen Runsheng; Deng Xing Wang; Li Songgang
NMPP: a user-customized NimbleGen microarray data processing pipeline.
Bioinformatics (Oxford, England) 2006;22(23):2955-7.
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2006: Chen Haodong; Karplus Valerie J; Ma Hong; Deng Xing Wang
Plant biology research comes of age in China.
The Plant cell 2006;18(11):2855-64.
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2006: Chen Haodong; Shen Yunping; Tang Xiaobo; Yu Lu; Wang Jia; Guo Lan; Zhang Yu; Zhang Huiyong; Feng Suhua; Strickland Elizabeth; Zheng Ning; Deng Xing Wang
Arabidopsis CULLIN4 Forms an E3 Ubiquitin Ligase with RBX1 and the CDD Complex in Mediating Light Control of Development.
The Plant cell 2006;18(8):1991-2004.
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2006: Li Lei; Wang Xiangfeng; Stolc Viktor; Li Xueyong; Zhang Dongfen; Su Ning; Tongprasit Waraporn; Li Songgang; Cheng Zhukuan; Wang Jun; Deng Xing Wang
Genome-wide transcription analyses in rice using tiling microarrays.
Nature genetics 2006;38(1):124-9.
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2006: Yi Chunling; Li Shuting; Wang Jian; Wei Ning; Deng Xing Wang
Affinity purification reveals the association of WD40 protein constitutive photomorphogenic 1 with the hetero-oligomeric TCP-1 chaperonin complex in mammalian cells.
The international journal of biochemistry & cell biology 2006;38(7):1076-83.
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2005: Kraft Edward; Stone Sophia L; Ma Lingeng; Su Ning; Gao Ying; Lau On-Sun; Deng Xing-Wang; Callis Judy
Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis.
Plant physiology 2005;139(4):1597-611.
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2005: Feng Jian-Xun; Liu Di; Pan Yi; Gong Wei; Ma Li-Geng; Luo Jing-Chu; Deng Xing Wang; Zhu Yu-Xian
An annotation update via cDNA sequence analysis and comprehensive profiling of developmental, hormonal or environmental responsiveness of the Arabidopsis AP2/EREBP transcription factor gene family.
Plant molecular biology 2005;59(6):853-68.
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2005: Jiao Yuling; Ma Ligeng; Strickland Elizabeth; Deng Xing Wang
Conservation and divergence of light-regulated genome expression patterns during seedling development in rice and Arabidopsis.
The Plant cell 2005;17(12):3239-56.
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2005: Shen Yunping; Feng Suhua; Ma Ligeng; Lin Rongcheng; Qu Li-Jia; Chen Zhangliang; Wang Haiyang; Deng Xing Wang
Arabidopsis FHY1 protein stability is regulated by light via phytochrome A and 26S proteasome.
Plant physiology 2005;139(3):1234-43.
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2005: Yi Chunling; Deng Xing Wang
COP1 - from plant photomorphogenesis to mammalian tumorigenesis.
Trends in cell biology 2005;15(11):618-25.
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2005: Stolc Viktor; Li Lei; Wang Xiangfeng; Li Xueyong; Su Ning; Tongprasit Waraporn; Han Bin; Xue Yongbiao; Li Jiayang; Snyder Michael; Gerstein Mark; Wang Jun; Deng Xing Wang
A pilot study of transcription unit analysis in rice using oligonucleotide tiling-path microarray.
Plant molecular biology 2005;59(1):137-49.
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2005: Ma Ligeng; Chen Chen; Liu Xigang; Jiao Yuling; Su Ning; Li Lin; Wang Xiangfeng; Cao Mengliang; Sun Ning; Zhang Xiuqing; Bao Jingyue; Li Jian; Pedersen Soren; Bolund Lars; Zhao Hongyu; Yuan Longping; Wong Gane Ka-Shu; Wang Jun; Deng Xing Wang; Wang Jian
A microarray analysis of the rice transcriptome and its comparison to Arabidopsis.
Genome research 2005;15(9):1274-83.
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2005: Yi Chunling; Li Shuting; Chen Xishu; Wiemer Erik A C; Wang Jian; Wei Ning; Deng Xing Wang
Major vault protein, in concert with constitutively photomorphogenic 1, negatively regulates c-Jun-mediated activator protein 1 transcription in mammalian cells.
Cancer research 2005;65(13):5835-40.
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2005: Li Lei; Deng Xing Wang
It runs in the family: regulation of brassinosteroid signaling by the BZR1-BES1 class of transcription factors.
Trends in plant science 2005;10(6):266-8.
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2005: Jiao Yuling; Jia Peixin; Wang Xiangfeng; Su Ning; Yu Shuliang; Zhang Dongfen; Ma Ligeng; Feng Qi; Jin Zhaoqing; Li Lei; Xue Yongbiao; Cheng Zhukuan; Zhao Hongyu; Han Bin; Deng Xing Wang
A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription.
The Plant cell 2005;17(6):1641-57.
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2005: Ma Ligeng; Sun Ning; Liu Xigang; Jiao Yuling; Zhao Hongyu; Deng Xing Wang
Organ-specific expression of Arabidopsis genome during development.
Plant physiology 2005;138(1):80-91.
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2005: Figueroa Pablo; Gusmaroli Giuliana; Serino Giovanna; Habashi Jessica; Ma Ligeng; Shen Yunping; Feng Suhua; Bostick Magnolia; Callis Judy; Hellmann Hanjo; Deng Xing Wang
Arabidopsis has two redundant Cullin3 proteins that are essential for embryo development and that interact with RBX1 and BTB proteins to form multisubunit E3 ubiquitin ligase complexes in vivo.
The Plant cell 2005;17(4):1180-95.
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2005: Su Ning; Sullivan James A; Deng Xing Wang
Modulation of F1 hybrid stature without altering parent plants through trans-activated expression of a mutated rice GAI homologue.
Plant biotechnology journal 2005;3(2):157-64.
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2005: Rubio Vicente; Shen Yunping; Saijo Yusuke; Liu Yule; Gusmaroli Giuliana; Dinesh-Kumar Savithramma P; Deng Xing Wang
An alternative tandem affinity purification strategy applied to Arabidopsis protein complex isolation.
The Plant journal : for cell and molecular biology 2005;41(5):767-78.
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2005: Rubio Vicente; Deng Xing Wang
Phy tunes: phosphorylation status and phytochrome-mediated signaling.
Cell 2005;120(3):290-2.
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2005: Menon Suchithra; Rubio Vicente; Wang Xiping; Deng Xing-Wang; Wei Ning
Purification of the COP9 signalosome from porcine spleen, human cell lines, and Arabidopsis thaliana plants.
Methods in enzymology 2005;398():468-81.
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2005: Li Lei; Wang Xiangfeng; Xia Mian; Stolc Viktor; Su Ning; Peng Zhiyu; Li Songgang; Wang Jun; Wang Xiping; Deng Xing Wang
Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture.
Genome biology 2005;6(6):R52.
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2004: Gusmaroli Giuliana; Feng Suhua; Deng Xing Wang
The Arabidopsis CSN5A and CSN5B subunits are present in distinct COP9 signalosome complexes, and mutations in their JAMM domains exhibit differential dominant negative effects on development.
The Plant cell 2004;16(11):2984-3001.
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2004: Yanagawa Yuki; Sullivan James A; Komatsu Setsuko; Gusmaroli Giuliana; Suzuki Genki; Yin Jianning; Ishibashi Toyotaka; Saijo Yusuke; Rubio Vicente; Kimura Seisuke; Wang Jian; Deng Xing Wang
Arabidopsis COP10 forms a complex with DDB1 and DET1 in vivo and enhances the activity of ubiquitin conjugating enzymes.
Genes & development 2004;18(17):2172-81.
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2004: Feng Suhua; Shen Yunping; Sullivan James A; Rubio Vicente; Xiong Yue; Sun Tai-ping; Deng Xing Wang
Arabidopsis CAND1, an unmodified CUL1-interacting protein, is involved in multiple developmental pathways controlled by ubiquitin/proteasome-mediated protein Degradation.
The Plant cell 2004;16(7):1870-82.
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2004: Gao Ying; Li Jinming; Strickland Elizabeth; Hua Sujun; Zhao Hongyu; Chen Zhangliang; Qu Lijia; Deng Xing Wang
An arabidopsis promoter microarray and its initial usage in the identification of HY5 binding targets in vitro.
Plant molecular biology 2004;54(5):683-99.
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2003: Sullivan James A; Shirasu Ken; Deng Xing Wang
The diverse roles of ubiquitin and the 26S proteasome in the life of plants.
Nature reviews. Genetics 2003;4(12):948-58.
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2003: Jiao Yuling; Yang Hongjuan; Ma Ligeng; Sun Ning; Yu Haiyuan; Liu Tie; Gao Ying; Gu Hongya; Chen Zhangliang; Wada Masamitsu; Gerstein Mark; Zhao Hongyu; Qu Li-Jia; Deng Xing Wang
A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development.
Plant physiology 2003;133(4):1480-93.
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2003: Sun Ning; Ma Ligeng; Pan Deyun; Zhao Hongyu; Deng Xing Wang
Evaluation of light regulatory potential of Calvin cycle steps based on large-scale gene expression profiling data.
Plant molecular biology 2003;53(4):467-78.
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2003: Saijo Yusuke; Sullivan James A; Wang Haiyang; Yang Jianping; Shen Yunping; Rubio Vicente; Ma Ligeng; Hoecker Ute; Deng Xing Wang
The COP1-SPA1 interaction defines a critical step in phytochrome A-mediated regulation of HY5 activity.
Genes & development 2003;17(21):2642-7.
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2003: Li Lei; Deng Xing Wang
The COP9 signalosome: an alternative lid for the 26S proteasome?
Trends in cell biology 2003;13(10):507-9.
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2003: Lykke-Andersen Karin; Schaefer Laura; Menon Suchithra; Deng Xing-Wang; Miller Jeffrey Boone; Wei Ning
Disruption of the COP9 signalosome Csn2 subunit in mice causes deficient cell proliferation, accumulation of p53 and cyclin E, and early embryonic death.
Molecular and cellular biology 2003;23(19):6790-7.
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2003: Sullivan James A; Deng Xing Wang
From seed to seed: the role of photoreceptors in Arabidopsis development.
Developmental biology 2003;260(2):289-97.
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2003: Feng Suhua; Ma Ligeng; Wang Xiping; Xie Daoxin; Dinesh-Kumar S P; Wei Ning; Deng Xing Wang
The COP9 signalosome interacts physically with SCF COI1 and modulates jasmonate responses.
The Plant cell 2003;15(5):1083-94.
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2003: Wang Xiping; Feng Suhua; Nakayama Naomi; Crosby W L; Irish Vivian; Deng Xing Wang; Wei Ning
The COP9 signalosome interacts with SCF UFO and participates in Arabidopsis flower development.
The Plant cell 2003;15(5):1071-82.
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2003: Serino Giovanna; Su Hongwen; Peng Zhaohua; Tsuge Tomohiko; Wei Ning; Gu Hongya; Deng Xing Wang
Characterization of the last subunit of the Arabidopsis COP9 signalosome: implications for the overall structure and origin of the complex.
The Plant cell 2003;15(3):719-31.
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2003: Ma Ligeng; Zhao Hongyu; Deng Xing Wang
Analysis of the mutational effects of the COP/DET/FUS loci on genome expression profiles reveals their overlapping yet not identical roles in regulating Arabidopsis seedling development.
Development (Cambridge, England) 2003;130(5):969-81.
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2003: Wei Ning; Deng Xing Wang
The COP9 signalosome.
Annual review of cell and developmental biology 2003;19():261-86.
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2002: Wang Haiyang; Ma Ligeng; Habashi Jessica; Li Jinming; Zhao Hongyu; Deng Xing W
Analysis of far-red light-regulated genome expression profiles of phytochrome A pathway mutants in Arabidopsis.
The Plant journal : for cell and molecular biology 2002;32(5):723-33.
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2002: Yi Chunling; Wang Haiyang; Wei Ning; Deng Xing Wang
An initial biochemical and cell biological characterization of the mammalian homologue of a central plant developmental switch, COP1.
BMC cell biology 2002;3():30.
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2002: Schwechheimer Claus; Serino Giovanna; Deng Xing-Wang
Multiple ubiquitin ligase-mediated processes require COP9 signalosome and AXR1 function.
The Plant cell 2002;14(10):2553-63.
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2002: Ma Ligeng; Gao Ying; Qu Lijia; Chen Zhangliang; Li Jinming; Zhao Hongyu; Deng Xing Wang
Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis.
The Plant cell 2002;14(10):2383-98.
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2002: Fry Rebecca C; Habashi Jessica; Okamoto Haruko; Deng Xing Wang
Characterization of a strong dominant phytochrome A mutation unique to phytochrome A signal propagation.
Plant physiology 2002;130(1):457-65.
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2002: Liu Yule; Schiff Michael; Serino Giovanna; Deng Xing-Wang; Dinesh-Kumar S P
Role of SCF ubiquitin-ligase and the COP9 signalosome in the N gene-mediated resistance response to Tobacco mosaic virus.
The Plant cell 2002;14(7):1483-96.
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2002: Hardtke Christian S; Okamoto Haruko; Stoop-Myer Chatanika; Deng Xing Wang
Biochemical evidence for ubiquitin ligase activity of the Arabidopsis COP1 interacting protein 8 (CIP8).
The Plant journal : for cell and molecular biology 2002;30(4):385-94.
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2002: Holm Magnus; Ma Li-Geng; Qu Li-Jia; Deng Xing-Wang
Two interacting bZIP proteins are direct targets of COP1-mediated control of light-dependent gene expression in Arabidopsis.
Genes & development 2002;16(10):1247-59.
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2002: Wang Haiyang; Deng Xing Wang
Arabidopsis FHY3 defines a key phytochrome A signaling component directly interacting with its homologous partner FAR1.
The EMBO journal 2002;21(6):1339-49.
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2002: Suzuki Genki; Yanagawa Yuki; Kwok Shing F; Matsui Minami; Deng Xing-Wang
Arabidopsis COP10 is a ubiquitin-conjugating enzyme variant that acts together with COP1 and the COP9 signalosome in repressing photomorphogenesis.
Genes & development 2002;16(5):554-9.
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2001: Ma L; Li J; Qu L; Hager J; Chen Z; Zhao H; Deng X W
Light control of Arabidopsis development entails coordinated regulation of genome expression and cellular pathways.
The Plant cell 2001;13(12):2589-607.
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2001: Peng Z; Serino G; Deng X W
Molecular characterization of subunit 6 of the COP9 signalosome and its role in multifaceted developmental processes in Arabidopsis.
The Plant cell 2001;13(11):2393-407.
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2001: Peng Z; Serino G; Deng X W
A role of Arabidopsis COP9 signalosome in multifaceted developmental processes revealed by the characterization of its subunit 3.
Development (Cambridge, England) 2001;128(21):4277-88.
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2001: Schwechheimer C; Deng X W
COP9 signalosome revisited: a novel mediator of protein degradation.
Trends in cell biology 2001;11(10):420-6.
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2001: Wang H; Ma L G; Li J M; Zhao H Y; Deng X W
Direct interaction of Arabidopsis cryptochromes with COP1 in light control development.
Science (New York, N.Y.) 2001;294(5540):154-8.
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2001: Okamoto H; Qu L; Deng X W
Does EID1 aid the fine-tuning of phytochrome A signal transduction in Arabidopsis?
The Plant cell 2001;13(9):1983-6.
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2001: Okamoto H; Matsui M; Deng X W
Overexpression of the heterotrimeric G-protein alpha-subunit enhances phytochrome-mediated inhibition of hypocotyl elongation in Arabidopsis.
The Plant cell 2001;13(7):1639-52.
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2001: Schwechheimer C; Serino G; Callis J; Crosby W L; Lyapina S; Deshaies R J; Gray W M; Estelle M; Deng X W
Interactions of the COP9 signalosome with the E3 ubiquitin ligase SCFTIRI in mediating auxin response.
Science (New York, N.Y.) 2001;292(5520):1379-82.
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2001: Peng Z; Staub J M; Serino G; Kwok S F; Kurepa J; Bruce B D; Vierstra R D; Wei N; Deng X W
The cellular level of PR500, a protein complex related to the 19S regulatory particle of the proteasome, is regulated in response to stresses in plants.
Molecular biology of the cell 2001;12(2):383-92.
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2001: Holm M; Hardtke C S; Gaudet R; Deng X W
Identification of a structural motif that confers specific interaction with the WD40 repeat domain of Arabidopsis COP1.
The EMBO journal 2001;20(1-2):118-27.
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2000: Abel S; Blázquez M; Dangl J; Deng X W; Graham I; Harada J; Jones J; Nilsson O
Arabidopsis Research 2000.
The Plant cell 2000;12(12):2302-2308.
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2000: Schwechheimer C; Deng X W
The COP/DET/FUS proteins-regulators of eukaryotic growth and development.
Seminars in cell & developmental biology 2000;11(6):495-503.
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2000: Hardtke C S; Deng X W
The cell biology of the COP/DET/FUS proteins. Regulating proteolysis in photomorphogenesis and beyond?
Plant physiology 2000;124(4):1548-57.
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2000: Osterlund M T; Wei N; Deng X W
The roles of photoreceptor systems and the COP1-targeted destabilization of HY5 in light control of Arabidopsis seedling development.
Plant physiology 2000;124(4):1520-4.
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2000: Hardtke C S; Gohda K; Osterlund M T; Oyama T; Okada K; Deng X W
HY5 stability and activity in arabidopsis is regulated by phosphorylation in its COP1 binding domain.
The EMBO journal 2000;19(18):4997-5006.
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2000: Kang D; Wang X; Cao K; Sun C; Deng X W; Wei N
A gain-of-function phenotype conferred by over-expression of functional subunits of the COP9 signalosome in Arabidopsis.
The Plant journal : for cell and molecular biology 2000;23(5):597-608.
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2000: Hsieh H L; Okamoto H; Wang M; Ang L H; Matsui M; Goodman H; Deng X W
FIN219, an auxin-regulated gene, defines a link between phytochrome A and the downstream regulator COP1 in light control of Arabidopsis development.
Genes & development 2000;14(15):1958-70.
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2000: Osterlund M T; Hardtke C S; Wei N; Deng X W
Targeted destabilization of HY5 during light-regulated development of Arabidopsis.
Nature 2000;405(6785):462-6.
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2000: Deng X W; Dubiel W; Wei N; Hofmann K; Mundt K; Colicelli J; Kato J; Naumann M; Segal D; Seeger M; Carr A; Glickman M; Chamovitz D A
Unified nomenclature for the COP9 signalosome and its subunits: an essential regulator of development.
Trends in genetics : TIG 2000;16(5):202-3.
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2000: Yamamoto Y Y; Puente P; Deng X W
An Arabidopsis cotyledon-specific albino locus: a possible role in 16S rRNA maturation.
Plant & cell physiology 2000;41(1):68-76.
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1999: Stoop-Myer C; Torii K U; McNellis T W; Coleman J E; Deng X W
Short communication: the N-terminal fragment of Arabidopsis photomorphogenic repressor COP1 maintains partial function and acts in a concentration-dependent manner.
The Plant journal : for cell and molecular biology 1999;20(6):713-7.
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1999: Serino G; Tsuge T; Kwok S; Matsui M; Wei N; Deng X W
Arabidopsis cop8 and fus4 mutations define the same gene that encodes subunit 4 of the COP9 signalosome.
The Plant cell 1999;11(10):1967-80.
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1999: Holm M; Deng X W
Structural organization and interactions of COP1, a light-regulated developmental switch.
Plant molecular biology 1999;41(2):151-8.
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1999: Torii K U; Stoop-Myer C D; Okamoto H; Coleman J E; Matsui M; Deng X W
The RING finger motif of photomorphogenic repressor COP1 specifically interacts with the RING-H2 motif of a novel Arabidopsis protein.
The Journal of biological chemistry 1999;274(39):27674-81.
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1999: Wang H; Kang D; Deng X W; Wei N
Evidence for functional conservation of a mammalian homologue of the light-responsive plant protein COP1.
Current biology : CB 1999;9(13):711-4.
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1999: Deng X W; Quail P H
Signalling in light-controlled development.
Seminars in cell & developmental biology 1999;10(2):121-9.
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1999: Wei N; Deng X W
Making sense of the COP9 signalosome. A regulatory protein complex conserved from Arabidopsis to human.
Trends in genetics : TIG 1999;15(3):98-103.
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1999: Osterlund M T; Ang L H; Deng X W
The role of COP1 in repression of Arabidopsis photomorphogenic development.
Trends in cell biology 1999;9(3):113-8.
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1999: Kwok S F; Staub J M; Deng X W
Characterization of two subunits of Arabidopsis 19S proteasome regulatory complex and its possible interaction with the COP9 complex.
Journal of molecular biology 1999;285(1):85-95.
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1998: Karniol B; Yahalom A; Kwok S; Tsuge T; Matsui M; Deng X W; Chamovitz D A
The Arabidopsis homologue of an eIF3 complex subunit associates with the COP9 complex.
FEBS letters 1998;439(1-2):173-9.
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1998: Kwok S F; Solano R; Tsuge T; Chamovitz D A; Ecker J R; Matsui M; Deng X W
Arabidopsis homologs of a c-Jun coactivator are present both in monomeric form and in the COP9 complex, and their abundance is differentially affected by the pleiotropic cop/det/fus mutations.
The Plant cell 1998;10(11):1779-90.
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1998: Osterlund M T; Deng X W
Multiple photoreceptors mediate the light-induced reduction of GUS-COP1 from Arabidopsis hypocotyl nuclei.
The Plant journal : for cell and molecular biology 1998;16(2):201-8.
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1998: Torii K U; McNellis T W; Deng X W
Functional dissection of Arabidopsis COP1 reveals specific roles of its three structural modules in light control of seedling development.
The EMBO journal 1998;17(19):5577-87.
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1998: Wei N; Deng X W
Characterization and purification of the mammalian COP9 complex, a conserved nuclear regulator initially identified as a repressor of photomorphogenesis in higher plants.
Photochemistry and photobiology 1998;68(2):237-41.
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1998: Chattopadhyay S; Puente P; Deng X W; Wei N
Combinatorial interaction of light-responsive elements plays a critical role in determining the response characteristics of light-regulated promoters in Arabidopsis.
The Plant journal : for cell and molecular biology 1998;15(1):69-77.
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1998: Wei N; Tsuge T; Serino G; Dohmae N; Takio K; Matsui M; Deng X W
The COP9 complex is conserved between plants and mammals and is related to the 26S proteasome regulatory complex.
Current biology : CB 1998;8(16):919-22.
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1998: Yamamoto Y Y; Matsui M; Ang L H; Deng X W
Role of a COP1 interactive protein in mediating light-regulated gene expression in arabidopsis.
The Plant cell 1998;10(7):1083-94.
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1998: Chattopadhyay S; Ang L H; Puente P; Deng X W; Wei N
Arabidopsis bZIP protein HY5 directly interacts with light-responsive promoters in mediating light control of gene expression.
The Plant cell 1998;10(5):673-83.
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1998: Ang L H; Chattopadhyay S; Wei N; Oyama T; Okada K; Batschauer A; Deng X W
Molecular interaction between COP1 and HY5 defines a regulatory switch for light control of Arabidopsis development.
Molecular cell 1998;1(2):213-22.
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1998: Deng X W
Light control of Arabidopsis developmental pattern.
Symposia of the Society for Experimental Biology 1998;51():93-6.
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1997: von Arnim A G; Osterlund M T; Kwok S F; Deng X W
Genetic and developmental control of nuclear accumulation of COP1, a repressor of photomorphogenesis in Arabidopsis.
Plant physiology 1997;114(3):779-88.
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1996: Staub J M; Deng X W
Light signal transduction in plants.
Photochemistry and photobiology 1996;64(6):897-905.
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1996: Staub J M; Wei N; Deng X W
Evidence for FUS6 as a component of the nuclear-localized COP9 complex in Arabidopsis.
The Plant cell 1996;8(11):2047-56.
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1996: von Arnim A; Deng X W
A role for transcriptional repression during light control of plant development.
BioEssays : news and reviews in molecular, cellular and developmental biology 1996;18(11):905-10.
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1996: Wei N; Deng X W
The role of the COP/DET/FUS genes in light control of arabidopsis seedling development.
Plant physiology 1996;112(3):871-8.
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1996: McNellis T W; Torii K U; Deng X W
Expression of an N-terminal fragment of COP1 confers a dominant-negative effect on light-regulated seedling development in Arabidopsis.
The Plant cell 1996;8(9):1491-503.
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1996: Chamovitz D A; Wei N; Osterlund M T; von Arnim A G; Staub J M; Matsui M; Deng X W
The COP9 complex, a novel multisubunit nuclear regulator involved in light control of a plant developmental switch.
Cell 1996;86(1):115-21.
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1996: Puente P; Wei N; Deng X W
Combinatorial interplay of promoter elements constitutes the minimal determinants for light and developmental control of gene expression in Arabidopsis.
The EMBO journal 1996;15(14):3732-43.
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1996: Kwok S F; Piekos B; Misera S; Deng X W
A complement of ten essential and pleiotropic arabidopsis COP/DET/FUS genes is necessary for repression of photomorphogenesis in darkness.
Plant physiology 1996;110(3):731-42.
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1995: McNellis T W; Deng X W
Light control of seedling morphogenetic pattern.
The Plant cell 1995;7(11):1749-61.
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1995: Chamovitz D A; Deng X W
The novel components of the Arabidopsis light signaling pathway may define a group of general developmental regulators shared by both animal and plant kingdoms.
Cell 1995;82(3):353-4.
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1995: Matsui M; Stoop C D; von Arnim A G; Wei N; Deng X W
Arabidopsis COP1 protein specifically interacts in vitro with a cytoskeleton-associated protein, CIP1.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(10):4239-43.
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1994: von Arnim A G; Deng X W
Light inactivation of Arabidopsis photomorphogenic repressor COP1 involves a cell-specific regulation of its nucleocytoplasmic partitioning.
Cell 1994;79(6):1035-45.
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1994: McNellis T W; von Arnim A G; Deng X W
Overexpression of Arabidopsis COP1 results in partial suppression of light-mediated development: evidence for a light-inactivable repressor of photomorphogenesis.
The Plant cell 1994;6(10):1391-400.
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1994: Wei N; Chamovitz D A; Deng X W
Arabidopsis COP9 is a component of a novel signaling complex mediating light control of development.
Cell 1994;78(1):117-24.
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1994: Wei N; Kwok S F; von Arnim A G; Lee A; McNellis T W; Piekos B; Deng X W
Arabidopsis COP8, COP10, and COP11 genes are involved in repression of photomorphogenic development in darkness.
The Plant cell 1994;6(5):629-43.
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1994: Ang L H; Deng X W
Regulatory hierarchy of photomorphogenic loci: allele-specific and light-dependent interaction between the HY5 and COP1 loci.
The Plant cell 1994;6(5):613-28.
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1994: McNellis T W; von Arnim A G; Araki T; Komeda Y; Miséra S; Deng X W
Genetic and molecular analysis of an allelic series of cop1 mutants suggests functional roles for the multiple protein domains.
The Plant cell 1994;6(4):487-500.
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1994: Deng X W
Fresh view of light signal transduction in plants.
Cell 1994;76(3):423-6.
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1993: von Arnim A G; Deng X W
Ring finger motif of Arabidopsis thaliana COP1 defines a new class of zinc-binding domain.
The Journal of biological chemistry 1993;268(26):19626-31.
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1992: Wei N; Deng X W
COP9: a new genetic locus involved in light-regulated development and gene expression in arabidopsis.
The Plant cell 1992;4(12):1507-18.
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1992: Deng X W; Matsui M; Wei N; Wagner D; Chu A M; Feldmann K A; Quail P H
COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a G beta homologous domain.
Cell 1992;71(5):791-801.
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1991: Bruce W B; Deng X W; Quail P H
A negatively acting DNA sequence element mediates phytochrome-directed repression of phyA gene transcription.
The EMBO journal 1991;10(10):3015-24.
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1991: Deng X W; Caspar T; Quail P H
cop1: a regulatory locus involved in light-controlled development and gene expression in Arabidopsis.
Genes & development 1991;5(7):1172-82.
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