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Sandy Der

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Oligonucleotide Array Sequence Analysis

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Roya Navab; Dan Strumpf; Bizhan Bandarchi; Chang-Qi Zhu; Melania Pintilie; Varune Rohan Ramnarine; Emin Ibrahimov; Nikolina Radulovich; Lisa Leung; Malgorzata Barczyk; Devang Panchal; Christine To; James J Yun; Sandy D Der; Frances A Shepherd; Igor Jurisica; Ming Tsao
Prognostic gene-expression signature of carcinoma-associated fibroblasts in non-small cell lung cancer.
James J Yun; Ming-Sound Tsao; Sandy D Der
Differential utilization of NF-kappaB RELA and RELB in response to extracellular versus intracellular polyIC stimulation in HT1080 cells.
Chang-Qi Zhu; Keyue Ding; Dan Strumpf; Barbara A Weir; Matthew Meyerson; Nathan Pennell; Roman K Thomas; Katsuhiko Naoki; Christine Ladd-Acosta; Ni Liu; Melania Pintilie; Sandy D Der; Lesley Seymour; Igor Jurisica; Frances A Shepherd; Ming-Sound Tsao
Prognostic and predictive gene signature for adjuvant chemotherapy in resected non-small-cell lung cancer.

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All Publications

2011: Roya Navab; Dan Strumpf; Bizhan Bandarchi; Chang-Qi Zhu; Melania Pintilie; Varune Rohan Ramnarine; Emin Ibrahimov; Nikolina Radulovich; Lisa Leung; Malgorzata Barczyk; Devang Panchal; Christine To; James J Yun; Sandy D Der; Frances A Shepherd; Igor Jurisica; Ming Tsao
Prognostic gene-expression signature of carcinoma-associated fibroblasts in non-small cell lung cancer.
Proceedings of the National Academy of Sciences of the United States of America 2011;108(17):7160-5.
2011: James J Yun; Ming-Sound Tsao; Sandy D Der
Differential utilization of NF-kappaB RELA and RELB in response to extracellular versus intracellular polyIC stimulation in HT1080 cells.
BMC immunology 2011;12():15.
2010: Chang-Qi Zhu; Keyue Ding; Dan Strumpf; Barbara A Weir; Matthew Meyerson; Nathan Pennell; Roman K Thomas; Katsuhiko Naoki; Christine Ladd-Acosta; Ni Liu; Melania Pintilie; Sandy D Der; Lesley Seymour; Igor Jurisica; Frances A Shepherd; Ming-Sound Tsao
Prognostic and predictive gene signature for adjuvant chemotherapy in resected non-small-cell lung cancer.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2010;28(29):4417-24.
2010: Frederik C Roos; Andrew M Roberts; Irene I L Hwang; Eduardo H Moriyama; Andrew J Evans; Stephanie Sybingco; Ian R Watson; Leticia A M Carneiro; Craig Gedye; Stephen E Girardin; Laurie E Ailles; Michael A S Jewett; Michael Milosevic; Brian C Wilson; John C Bell; Sandy D Der; Michael Ohh
Oncolytic targeting of renal cell carcinoma via encephalomyocarditis virus.
EMBO molecular medicine 2010;2(7):275-88.
2009: Chang-Qi Zhu; Melania Pintilie; Thomas John; Dan Strumpf; Frances A Shepherd; Sandy D Der; Igor Jurisica; Ming Tsao
Understanding prognostic gene expression signatures in lung cancer.
Clinical lung cancer 2009;10(5):331-40.
2009: Paul C Boutros; Suzanne K Lau; Melania Pintilie; Ni Liu; Frances A Shepherd; Sandy D Der; Ming Tsao; Linda Z Penn; Igor Jurisica
Prognostic gene signatures for non-small-cell lung cancer.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(8):2824-8.
2009: Randall H Friedline; David S Brown; Hai Nguyen; Hardy Kornfeld; Jinhee Lee; Yi Zhang; Mark Appleby; Sandy D Der; Joonsoo Kang; Cynthia A Chambers
CD4+ regulatory T cells require CTLA-4 for the maintenance of systemic tolerance.
The Journal of experimental medicine 2009;206(2):421-34.
2008: George Bikopoulos; Aurelio da Silva Pimenta; Simon C Lee; Jonathan R T Lakey; Sandy D Der; Catherine B Chan; Rolando Bacis Ceddia; Michael B Wheeler; Maria Rozakis-Adcock
Ex vivo transcriptional profiling of human pancreatic islets following chronic exposure to monounsaturated fatty acids.
The Journal of endocrinology 2008;196(3):455-64.
2007: Suzanne K Lau; Paul C Boutros; Melania Pintilie; Fiona H Blackhall; Chang-Qi Zhu; Dan Strumpf; Michael R Johnston; Gail Darling; Shaf Keshavjee; Thomas K Waddell; Ni Liu; Davina Lau; Linda Z Penn; Frances A Shepherd; Igor Jurisica; Sandy D Der; Ming Tsao
Three-gene prognostic classifier for early-stage non small-cell lung cancer.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2007;25(35):5562-9.
2007: Emily Walker; Minako Ohishi; Ryan E Davey; Wen Zhang; Paul A Cassar; Tetsuya S Tanaka; Sandy D Der; Quaid Morris; Timothy R Hughes; Peter W Zandstra; William L Stanford
Prediction and testing of novel transcriptional networks regulating embryonic stem cell self-renewal and commitment.
Cell stem cell 2007;1(1):71-86.
2007: Martin D Hyrcza; Colin Kovacs; Mona R Loutfy; Roberta Halpenny; Lawrence Heisler; Stuart Yang; Olivia Wilkins; Mario Ostrowski; Sandy D Der
Distinct transcriptional profiles in ex vivo CD4+ and CD8+ T cells are established early in human immunodeficiency virus type 1 infection and are characterized by a chronic interferon response as well as extensive transcriptional changes in CD8+ T cells.
Journal of virology 2007;81(7):3477-86.
2007: Heather Melichar; Kavitha Narayan; Sandy D Der; Yoshiki Hiraoka; Noemie Gardiol; Grégoire Jeannet; Werner Held; Cynthia A Chambers; Joonsoo Kang
Regulation of gammadelta versus alphabeta T lymphocyte differentiation by the transcription factor SOX13.
Science (New York, N.Y.) 2007;315(5809):230-3.
2006: Irene I L Hwang; Ian R Watson; Sandy D Der; Michael Ohh
Loss of VHL confers hypoxia-inducible factor (HIF)-dependent resistance to vesicular stomatitis virus: role of HIF in antiviral response.
Journal of virology 2006;80(21):10712-23.
2006: Boris P-L Lee; Wenhao Chen; Hui Shi; Sandy D Der; Reinhold Förster; Li Zhang
CXCR5/CXCL13 interaction is important for double-negative regulatory T cell homing to cardiac allografts.
Journal of immunology (Baltimore, Md. : 1950) 2006;176(9):5276-83.
2006: James J Yun; Lawrence Heisler; Irene I L Hwang; Olivia Wilkins; Suzanne K Lau; Martin Hyrcza; Bamini Jayabalasingham; Jing Jin; JoAnne McLaurin; Ming Tsao; Sandy D Der
Genomic DNA functions as a universal external standard in quantitative real-time PCR.
Nucleic acids research 2006;34(12):e85.
2006: Sarah Batty; Edith M C Chow; Altaf Kassam; Sandy D Der; Jeremy Mogridge
Inhibition of mitogen-activated protein kinase signalling by Bacillus anthracis lethal toxin causes destabilization of interleukin-8 mRNA.
Cellular microbiology 2006;8(1):130-8.
2005: Zuyao Ni; Elizabeth Karaskov; Tao Yu; Steven M Callaghan; Sandy D Der; David Park; Zhaodong Xu; Samantha G Pattenden; Rod Bremner
Apical role for BRG1 in cytokine-induced promoter assembly.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(41):14611-6.
2005: Mohan Subramanian; Wen-ben Qiao; Nurussaba Khanam; Olivia Wilkins; Sandy D Der; Jonathan D Lalich; Andrew L Bognar
Transcriptional regulation of the one-carbon metabolism regulon in Saccharomyces cerevisiae by Bas1p.
Molecular microbiology 2005;57(1):53-69.
2005: Boris P-L Lee; Elaine Mansfield; Szu-Chuan Hsieh; Tina Hernandez-Boussard; Wenhao Chen; Christopher W Thomson; Megan S Ford; Steven E Bosinger; Sandy D Der; Zhu-Xu Zhang; Meixia Zhang; David J Kelvin; Minnie M Sarwal; Li Zhang
Expression profiling of murine double-negative regulatory T cells suggest mechanisms for prolonged cardiac allograft survival.
Journal of immunology (Baltimore, Md. : 1950) 2005;174(8):4535-44.
2005: Salma Begum; Nashmil Emami; Nashmil Emani; Albert Cheung; Olivia Wilkins; Sandy D Der; Paul A Hamel
Cell-type-specific regulation of distinct sets of gene targets by Pax3 and Pax3/FKHR.
Oncogene 2005;24(11):1860-72.
2005: Altaf Kassam; Sandy D Der; Jeremy Mogridge
Differentiation of human monocytic cell lines confers susceptibility to Bacillus anthracis lethal toxin.
Cellular microbiology 2005;7(2):281-92.
2005: Lawrence Heisler; Dax Torti; Paul C Boutros; John Watson; Charles Chan; Neil Winegarden; Mark Takahashi; Patrick Yau; Hui-Ming (Tim) Huang; Peggy J Farnham; Igor Jurisica; James R Woodgett; Rod Bremner; Linda Z Penn; Sandy D Der
CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome.
Nucleic acids research 2005;33(9):2952-61.
2004: Joonsoo Kang; Brian DiBenedetto; Kavitha Narayan; Hang Zhao; Sandy D Der; Cynthia A Chambers
STAT5 is required for thymopoiesis in a development stage-specific manner.
Journal of immunology (Baltimore, Md. : 1950) 2004;173(4):2307-14.
2004: Y C Song; Songmu Jin; H Louie; D Ng; R Lau; Y Zhang; R Weerasekera; ST al Rashid; L A Ward; Sandy D Der; Voon Loong Chan
FlaC, a protein of Campylobacter jejuni TGH9011 (ATCC43431) secreted through the flagellar apparatus, binds epithelial cells and influences cell invasion.
Molecular microbiology 2004;53(2):541-53.
2004: Louis S Liou; Ting Shi; Zhong-Hui Duan; Provash C Sadhukhan; Sandy D Der; Andrew A Novick; John G Hissong; Marek Skacel; alex almasan; Joseph A DiDonato
Microarray gene expression profiling and analysis in renal cell carcinoma.
BMC urology 2004;4():9.
2004: Joonsoo Kang; Sandy D Der
Cytokine functions in the formative stages of a lymphocyte's life.
Current opinion in immunology 2004;16(2):180-90.
2004: Xiaolin Wang; Hui Li; Domenica De Leo; Wanbei Guo; Vasilij Koshkin; I George Fantus; Adria Giacca; Catherine B Chan; Sandy D Der; Michael B Wheeler
Gene and protein kinase expression profiling of reactive oxygen species-associated lipotoxicity in the pancreatic beta-cell line MIN6.
Diabetes 2004;53(1):129-40.