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Katherine Dunn

Research Profile

Phenomena

Concepts & Ideas

Activities & Behaviors

Computer Simulation

Chemicals & Drugs

Living Beings

Anatomy

Flagellum

Genes & Molecular Sequences

Physiology

Acclimatization

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Co-author Network

Co-Publications
Name
7
Joseph Bielawski
3
Hong Gu
2
Ziheng Yang
1
Oded Béjà
1
Gazalah Sabehi

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Publications

TOP 3
Katherine A Dunn; Christopher Field; Wenyi Jiang; Joseph P Bielawski
Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices.
Katherine A Dunn; Joseph P Bielawski; Todd J Ward; Caroline Urquhart; Hong Gu
Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept".
Le Bao; Hong Gu; Katherine A Dunn; Joseph P Bielawski
Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution.

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All Publications

2013: Katherine A Dunn; Christopher Field; Wenyi Jiang; Joseph P Bielawski
Improving evolutionary models for mitochondrial protein data with site-class specific amino acid exchangeability matrices.
PloS one 2013;8(1):e55816.
2009: Katherine A Dunn; Joseph P Bielawski; Todd J Ward; Caroline Urquhart; Hong Gu
Reconciling ecological and genomic divergence among lineages of listeria under an "extended mosaic genome concept".
Molecular biology and evolution 2009;26(11):2605-15.
2008: Le Bao; Hong Gu; Katherine A Dunn; Joseph P Bielawski
Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution.
Molecular biology and evolution 2008;25(9):1995-2007.
2007: Le Bao; Hong Gu; Katherine A Dunn; Joseph P Bielawski
Methods for selecting fixed-effect models for heterogeneous codon evolution, with comments on their application to gene and genome data.
BMC evolutionary biology 2007;7 Suppl 1():S5.
2004: Joseph P Bielawski; Katherine A Dunn; Gazalah Sabehi; Oded Béjà
Darwinian adaptation of proteorhodopsin to different light intensities in the marine environment.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(41):14824-9.
2003: Katherine A Dunn; John D McEachran; Rodney L Honeycutt
Molecular phylogenetics of myliobatiform fishes (Chondrichthyes: Myliobatiformes), with comments on the effects of missing data on parsimony and likelihood.
Molecular phylogenetics and evolution 2003;27(2):259-70.
2001: Katherine A Dunn; Joseph P Bielawski; Ziheng Yang
Substitution rates in Drosophila nuclear genes: implications for translational selection.
Genetics 2001;157(1):295-305.
2000: Joseph P Bielawski; Katherine A Dunn; Ziheng Yang
Rates of nucleotide substitution and mammalian nuclear gene evolution. Approximate and maximum-likelihood methods lead to different conclusions.
Genetics 2000;156(3):1299-308.

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