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Josée Dupuis

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Publications

TOP 3
Chen Lu; George T O'Connor; Josée Dupuis; Jeanne Latourelle; Eric D Kolaczyk
Network-guided sparse regression modeling for detection of gene-by-gene interactions.
Han Chen; James B Meigs; Josée Dupuis
Sequence kernel association test for quantitative traits in family samples.
Han Chen; Alisa K Manning; Josée Dupuis
A method of moments estimator for random effect multivariate meta-analysis.

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All Publications

2013: Chen Lu; George T O'Connor; Josée Dupuis; Jeanne Latourelle; Eric D Kolaczyk
Network-guided sparse regression modeling for detection of gene-by-gene interactions.
Bioinformatics (Oxford, England) 2013;29(10):1241-9.
2013: Han Chen; James B Meigs; Josée Dupuis
Sequence kernel association test for quantitative traits in family samples.
Genetic epidemiology 2013;37(2):196-204.
2012: Han Chen; Alisa K Manning; Josée Dupuis
A method of moments estimator for random effect multivariate meta-analysis.
Biometrics 2012;68(4):1278-84.
2012: Audrey E Hendricks; Mark W Logue; Josée Dupuis; Mayetri Gupta; Kathryn L Lunetta
A comparison of gene region simulation methods.
PloS one 2012;7(7):e40925.
2012: Jonna L Grimsby; Muin J Khoury; Tiebin Liu; James B Meigs; Renee M Ned; Bianca C Porneala; Jason L Vassy; Quanhe Yang; Ajay Yesupriya; Man-huei Chang; Nicole Dowling; Josée Dupuis; Jose C Florez
Race-ethnic differences in the association of genetic loci with HbA1c levels and mortality in U.S. adults: the third National Health and Nutrition Examination Survey (NHANES III).
BMC medical genetics 2012;13():30.
2011: Jason L Vassy; Quanhe Yang; Ajay Yesupriya; Renée M Ned; Peter Shrader; Man-huei Chang; Nicole F Dowling; Josée Dupuis; Jose C Florez; Muin J Khoury; Tiebin Liu; James B Meigs
Genetic associations with metabolic syndrome and its quantitative traits by race/ethnicity in the United States.
Metabolic syndrome and related disorders 2011;9(6):475-82.
2011: Jared W Magnani; David D McManus; Michiel Rienstra; Moritz F Sinner; Josée Dupuis; Patrick T Ellinor; Honghuang Lin; Steven A Lubitz; Emelia J Benjamin
Atrial fibrillation: current knowledge and future directions in epidemiology and genomics.
Circulation 2011;124(18):1982-93.
2011: Jose M de Miguel-Yanes; Josée Dupuis; Jose C Florez; Caroline S Fox; Anuj Goel; Anders Hamsten; Alisa K Manning; Jarred B McAteer; Peter Shrader; James B Meigs
Variants at the endocannabinoid receptor CB1 gene (CNR1) and insulin sensitivity, type 2 diabetes, and coronary heart disease.
Obesity (Silver Spring, Md.) 2011;19(10):2031-7.
2011: Gina M Peloso; Josée Dupuis; Kathryn L Lunetta
Evaluation of methods accounting for population structure with pedigree data and continuous outcomes.
Genetic epidemiology 2011;35(6):427-36.
2011: Seung-Hoan Choi; Josée Dupuis; Chunyu Liu; Mark W Logue; Gyungah Jun
Using linkage analysis of large pedigrees to guide association analyses.
BMC proceedings 2011;5 Suppl 9():S79.
2011: Han Chen; Yansong Cheng; Adrienne L Cupples; Josée Dupuis; Audrey E Hendricks; Ching-Ti Liu
Comparison of statistical approaches to rare variant analysis for quantitative traits.
BMC proceedings 2011;5 Suppl 9():S113.
2011: Alisa K Manning; Michael P LaValley; Ching-Ti Liu; Kenneth Rice; Ping An; Yongmei Liu; Iva Miljkovic; Laura Rasmussen-Torvik; Tamara B Harris; Michael A Province; Ingrid B Borecki; Jose C Florez; James B Meigs; L Adrienne Cupples; Josée Dupuis
Meta-analysis of gene-environment interaction: joint estimation of SNP and SNP × environment regression coefficients.
Genetic epidemiology 2011;35(1):11-8.
2010: David Karasik; Josée Dupuis; Kelly Cho; L Adrienne Cupples; Yanhua Zhou; Douglas P Kiel; Serkalem Demissie
Refined QTLs of osteoporosis-related traits by linkage analysis with genome-wide SNPs: Framingham SHARe.
Bone 2010;46(4):1114-21.
2010: Ming-Huei Chen; Paul Van Eerdewegh; Quentin B Vincent; Alexandre Alcais; Laurent Abel; Josée Dupuis
Evaluation of approaches to identify associated SNPs that explain the linkage evidence in nuclear families with affected siblings.
Human heredity 2010;69(2):104-19.
2009: Josée Dupuis; Jianxin Shi; Alisa K Manning; Emelia Benjamin; James B Meigs; L Adrienne Cupples; David O Siegmund
Mapping quantitative traits in unselected families: algorithms and examples.
Genetic epidemiology 2009;33(7):617-27.
2009: E S Stolerman; Alisa K Manning; J B McAteer; Caroline S Fox; Josée Dupuis; James B Meigs; Jose C Florez
TCF7L2 variants are associated with increased proinsulin/insulin ratios but not obesity traits in the Framingham Heart Study.
Diabetologia 2009;52(4):614-20.
2009: Alisa K Manning; Julius Suh Ngwa; Audrey E Hendricks; Ching-Ti Liu; Andrew D Johnson; Josée Dupuis; L Adrienne Cupples
Incorporating biological knowledge in the search for gene x gene interaction in genome-wide association studies.
BMC proceedings 2009;3 Suppl 7():S81.
2009: Audrey E Hendricks; Yanyan Zhu; Josée Dupuis
Genome-wide association and linkage analysis of quantitative traits: comparison of likelihood-ratio test and conditional score statistic.
BMC proceedings 2009;3 Suppl 7():S100.
2008: Marie-France Hivert; Alisa K Manning; Jarred B McAteer; Jose C Florez; Josée Dupuis; Caroline S Fox; Christopher J O'Donnell; L Adrienne Cupples; James B Meigs
Common variants in the adiponectin gene (ADIPOQ) associated with plasma adiponectin levels, type 2 diabetes, and diabetes-related quantitative traits: the Framingham Offspring Study.
Diabetes 2008;57(12):3353-9.
2008: James B Meigs; Peter Shrader; Lisa M Sullivan; Jarred B McAteer; Caroline S Fox; Josée Dupuis; Alisa K Manning; Jose C Florez; Peter W F Wilson; Ralph B D'Agostino; L Adrienne Cupples
Genotype score in addition to common risk factors for prediction of type 2 diabetes.
The New England journal of medicine 2008;359(21):2208-19.
2008: John F Keaney; Izabella Lipinska; Martin G Larson; Josée Dupuis; Jane E Freedman; Naomi M Hamburg; Joseph M Massaro; Jian Rong; Patrice Sutherland; Joseph A Vita; Ramachandran S Vasan; Emelia Benjamin
Clinical correlates, heritability, and genetic linkage of circulating CD40 ligand in the Framingham Offspring Study.
American heart journal 2008;156(5):1003-1009.e1.
2008: Elliot S Stolerman; Alisa K Manning; Jarred B McAteer; Josée Dupuis; Caroline S Fox; L Adrienne Cupples; James B Meigs; Jose C Florez
Haplotype structure of the ENPP1 Gene and Nominal Association of the K121Q missense single nucleotide polymorphism with glycemic traits in the Framingham Heart Study.
Diabetes 2008;57(7):1971-7.
2008: K Cho; Serkalem Demissie; Josée Dupuis; L Adrienne Cupples; Sekar Kathiresan; Thomas J Beck; David Karasik; Douglas P Kiel
Polymorphisms in the endothelial nitric oxide synthase gene and bone density/ultrasound and geometry in humans.
Bone 2008;42(1):53-60.
2007: Josée Dupuis; David O Siegmund; Benjamin Yakir
A unified framework for linkage and association analysis of quantitative traits.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(51):20210-5.
2007: Jose C Florez; Alisa K Manning; Josée Dupuis; Jarred McAteer; Kathryn Irenze; Lauren Gianniny; Daniel B Mirel; Caroline S Fox; L Adrienne Cupples; James B Meigs
A 100K genome-wide association scan for diabetes and related traits in the Framingham Heart Study: replication and integration with other genome-wide datasets.
Diabetes 2007;56(12):3063-74.
2007: David Karasik; Josée Dupuis; L Adrienne Cupples; Thomas J Beck; Michael C Mahaney; Lorena Mylinda Havill; Douglas P Kiel; Serkalem Demissie
Bivariate linkage study of proximal hip geometry and body size indices: the Framingham study.
Calcified tissue international 2007;81(3):162-73.
2007: Douglas P Kiel; Serge L Ferrari; L Adrienne Cupples; David Karasik; Danielle Manen; Alma Imamovic; Alan G Herbert; Josée Dupuis
Genetic variation at the low-density lipoprotein receptor-related protein 5 (LRP5) locus modulates Wnt signaling and the relationship of physical activity with bone mineral density in men.
Bone 2007;40(3):587-96.
2007: Serkalem Demissie; Josée Dupuis; L Adrienne Cupples; Thomas J Beck; Douglas P Kiel; David Karasik
Proximal hip geometry is linked to several chromosomal regions: genome-wide linkage results from the Framingham Osteoporosis Study.
Bone 2007;40(3):743-50.
2007: Ming-Huei Chen; Jing Cui; Chao-Yu Guo; L Adrienne Cupples; Paul Van Eerdewegh; Josée Dupuis; Qiong Yang
Joint modeling of linkage and association using affected sib-pair data.
BMC proceedings 2007;1 Suppl 1():S38.
2007: Kelly Cho; Qiong Yang; Josée Dupuis
Handling linkage disequilibrium in linkage analysis using dense single-nucleotide polymorphisms.
BMC proceedings 2007;1 Suppl 1():S161.
2007: Josée Dupuis; Kees Albers; Kristina Allen-Brady; Kelly Cho; Robert C Elston; Hilbert J Kappen; Hua Tang; Alun Thomas; Glenys Thomson; Eric Tsung; Qiong Yang; Weihua Zhang; Keyan Zhao; Gang Zheng; Julie T Ziegler
Effect of linkage disequilibrium between markers in linkage and association analyses.
Genetic epidemiology 2007;31 Suppl 1():S139-48.
2007: Qiong Yang; Joanna M Biernacka; Ming-Huei Chen; Jeanine J Houwing-Duistermaat; Tracy L Bergemann; Saonli Basu; Ruzong Fan; Lian Liu; Mathieu Bourgey; Françoise Clerget-Darpoux; Wan-Yu Lin; Robert C Elston; L Adrienne Cupples; Victor Apprey; Jing Cui; Josée Dupuis; Iuliana Ionita-Laza; Rui Li; Xuemei Lou; Hervé Perdry; Richard Sherva; Yin Yao Shugart; Brian K Suarez; Hongling Wang; Hanna Wormald; Guan Xing; Chao Xing
Using linkage and association to identify and model genetic effects: summary of GAW15 Group 4.
Genetic epidemiology 2007;31 Suppl 1():S34-42.
2007: Caroline S Fox; Nancy L Heard-Costa; L Adrienne Cupples; Josée Dupuis; Ramachandran S Vasan; Larry D Atwood
Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project.
BMC medical genetics 2007;8 Suppl 1():S18.
2007: James B Meigs; Alisa K Manning; Caroline S Fox; Jose C Florez; Chunyu Liu; L Adrienne Cupples; Josée Dupuis
Genome-wide association with diabetes-related traits in the Framingham Heart Study.
BMC medical genetics 2007;8 Suppl 1():S16.
2007: Douglas P Kiel; Serkalem Demissie; Josée Dupuis; Kathryn L Lunetta; Joanne M Murabito; David Karasik
Genome-wide association with bone mass and geometry in the Framingham Heart Study.
BMC medical genetics 2007;8 Suppl 1():S14.
2007: Emelia Benjamin; Josée Dupuis; Martin G Larson; Kathryn L Lunetta; Sarah L Booth; Diddahally R Govindaraju; Sekar Kathiresan; John F Keaney; Michelle J Keyes; Jing-Ping Lin; James B Meigs; Sander J Robins; Jian Rong; Renate Schnabel; Joseph A Vita; Thomas J Wang; Peter W F Wilson; Philip A Wolf; Ramachandran S Vasan
Genome-wide association with select biomarker traits in the Framingham Heart Study.
BMC medical genetics 2007;8 Suppl 1():S11.
2006: James B Meigs; Josée Dupuis; Chunyu Liu; Christopher J O'Donnell; Caroline S Fox; Sekar Kathiresan; Stacey B Gabriel; Martin G Larson; Qiong Yang; Alan G Herbert; Peter W F Wilson; Dali Feng; Geoffrey H Tofler; L Adrienne Cupples
PAI-1 Gene 4G/5G polymorphism and risk of type 2 diabetes in a population-based sample.
Obesity (Silver Spring, Md.) 2006;14(5):753-8.
2005: Josée Dupuis; Martin G Larson; Ramachandran S Vasan; Joseph M Massaro; Peter W F Wilson; Izabella Lipinska; Diane Corey; Joseph A Vita; John F Keaney; Emelia Benjamin
Genome scan of systemic biomarkers of vascular inflammation in the Framingham Heart Study: evidence for susceptibility loci on 1q.
Atherosclerosis 2005;182(2):307-14.
2005: James B Meigs; Josée Dupuis; Alan G Herbert; Chunyu Liu; Peter W F Wilson; L Adrienne Cupples
The insulin gene variable number tandem repeat and risk of type 2 diabetes in a population-based sample of families and unrelated men and women.
The Journal of clinical endocrinology and metabolism 2005;90(2):1137-43.
2005: Ming-Huei Chen; Paul Van Eerdewegh; Josée Dupuis
Identification of polymorphisms explaining a linkage signal: application to the GAW14 simulated data.
BMC genetics 2005;6 Suppl 1():S88.
2005: Chunyu Liu; L Adrienne Cupples; Josée Dupuis
Comparisons of case-selection approaches based on allele sharing and/or disease severity index: application to the GAW14 simulated data.
BMC genetics 2005;6 Suppl 1():S103.
2005: Chao-Yu Guo; Anita L DeStefano; Kathryn L Lunetta; Josée Dupuis; L Adrienne Cupples
Expectation maximization algorithm based haplotype relative risk (EM-HRR): test of linkage disequilibrium using incomplete case-parents trios.
Human heredity 2005;59(3):125-35.