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Karl Ekwall

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Schizosaccharomyces

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TOP 3
Ulrika Norman-Axelsson; Punit Prasad; Mickaël Durand-Dubief; Karl Ekwall
DNA topoisomerase III localizes to centromeres and affects centromeric CENP-A levels in fission yeast.
Julia Pointner; Punit Prasad; Annelie Strålfors; J Peter Svensson; Karl Ekwall; Olga Khorosjutina; Nils Krietenstein; Ulrika Norman-Axelsson; Jenna Persson; Philipp Korber
CHD1 remodelers regulate nucleosome spacing in vitro and align nucleosomal arrays over gene coding regions in S. pombe.
Jonas O Carlsten; Ingela Djupedal; Karl Ekwall; Claes M Gustafsson; Beidong Liu; Marcela Davila Lopez; Thomas Nyström; Erzsébet Szászi; Zsolt Szilagyi; Xuefeng Zhu
Mediator promotes CENP-a incorporation at fission yeast centromeres.

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All Publications

2013: Ulrika Norman-Axelsson; Punit Prasad; Mickaël Durand-Dubief; Karl Ekwall
DNA topoisomerase III localizes to centromeres and affects centromeric CENP-A levels in fission yeast.
PLoS genetics 2013;9(3):e1003371.
2012: Julia Pointner; Punit Prasad; Annelie Strålfors; J Peter Svensson; Karl Ekwall; Olga Khorosjutina; Nils Krietenstein; Ulrika Norman-Axelsson; Jenna Persson; Philipp Korber
CHD1 remodelers regulate nucleosome spacing in vitro and align nucleosomal arrays over gene coding regions in S. pombe.
The EMBO journal 2012;31(23):4388-403.
2012: Jonas O Carlsten; Ingela Djupedal; Karl Ekwall; Claes M Gustafsson; Beidong Liu; Marcela Davila Lopez; Thomas Nyström; Erzsébet Szászi; Zsolt Szilagyi; Xuefeng Zhu
Mediator promotes CENP-a incorporation at fission yeast centromeres.
Molecular and cellular biology 2012;32(19):4035-43.
2012: Eun Shik Choi; Karl Ekwall; Alison L Pidoux; Annelie Strålfors; J Peter Svensson; Araceli G Castillo; Sandra Catania; Robin C Allshire
Factors that promote H3 chromatin integrity during transcription prevent promiscuous deposition of CENP-A(Cnp1) in fission yeast.
PLoS genetics 2012;8(9):e1002985.
2012: Babett Steglich; Bas van Steensel; Guillaume J Filion; Karl Ekwall
The inner nuclear membrane proteins Man1 and Ima1 link to two different types of chromatin at the nuclear periphery in S. pombe.
Nucleus (Austin, Tex.) 2012;3(1):77-87.
2011: Stefan Deneberg; Konstanze Döhner; Karl Ekwall; Verena Gaidzik; Philippe Guardiola; Martin Höglund; Mohsen Karimi; Andreas Lennartsson; Hareth Nahi; Christer Paul; Ying Qu; Ulf Tidefelt; Bertil Uggla; Sofia Bengtzén; Odile Blanchet; Sören Lehmann
Prognostic DNA methylation patterns in cytogenetically normal acute myeloid leukemia are predefined by stem cell chromatin marks.
Blood 2011;118(20):5573-82.
2011: Laia Sadeghi; Annelie Strålfors; Carolina Bonilla; Karl Ekwall; J Peter Svensson
Podbat: a novel genomic tool reveals Swr1-independent H2A.Z incorporation at gene coding sequences through epigenetic meta-analysis.
PLoS computational biology 2011;7(8):e1002163.
2011: Eun Shik Choi; Mickaël Durand-Dubief; Karl Ekwall; Annelie Strålfors; Araceli G Castillo; Robin C Allshire
Identification of noncoding transcripts from within CENP-A chromatin at fission yeast centromeres.
The Journal of biological chemistry 2011;286(26):23600-7.
2011: Punit Prasad; Karl Ekwall
New insights into how chromatin remodellers direct CENP-A to centromeres.
The EMBO journal 2011;30(10):1875-6.
2011: Annelie Strålfors; Julian Walfridsson; Hasanuzzaman Bhuiyan; Karl Ekwall
The FUN30 chromatin remodeler, Fft3, protects centromeric and subtelomeric domains from euchromatin formation.
PLoS genetics 2011;7(3):e1001334.
2010: Olga Khorosjutina; Paulina Wanrooij; Julian Walfridsson; Zsolt Szilagyi; Xuefeng Zhu; Vera Baraznenok; Karl Ekwall; Claes M Gustafsson
A chromatin-remodeling protein is a component of fission yeast mediator.
The Journal of biological chemistry 2010;285(39):29729-37.
2010: Mickaël Durand-Dubief; Jenna Persson; Ulrika Norman; Edgar Hartsuiker; Karl Ekwall
Topoisomerase I regulates open chromatin and controls gene expression in vivo.
The EMBO journal 2010;29(13):2126-34.
2010: Indranil Sinha; A Francis Stewart; Michael Grunstein; Michelle Rönnerblad; Andrej Shevchenko; Carolina Bonilla; Luke Buchanan; Mickaël Durand-Dubief; Karl Ekwall
Genome-wide mapping of histone modifications and mass spectrometry reveal H4 acetylation bias and H3K36 methylation at gene promoters in fission yeast.
Epigenomics 2010;2(3):377-93.
2010: Jenna Persson; Karl Ekwall
Chd1 remodelers maintain open chromatin and regulate the epigenetics of differentiation.
Experimental cell research 2010;316(8):1316-23.
2009: Ingela Djupedal; Isabelle C Kos-Braun; Rebecca Mosher; Niklas Söderholm; Femke Simmer; Thomas J Hardcastle; Aurélie Fender; Nadja Heidrich; Alexander Kagansky; Elizabeth Bayne; E Gerhart H Wagner; David C Baulcombe; Robin C Allshire; Karl Ekwall
Analysis of small RNA in fission yeast; centromeric siRNAs are potentially generated through a structured RNA.
The EMBO journal 2009;28(24):3832-44.
2009: Anna Johnsson; Mickaël Durand-Dubief; Yongtao Xue-Franzén; Michelle Rönnerblad; Karl Ekwall; Anthony Wright
HAT-HDAC interplay modulates global histone H3K14 acetylation in gene-coding regions during stress.
EMBO reports 2009;10(9):1009-14.
2009: Andreas Lennartsson; Karl Ekwall
Histone modification patterns and epigenetic codes.
Biochimica et biophysica acta 2009;1790(9):863-8.
2009: Ingela Djupedal; Karl Ekwall
Epigenetics: heterochromatin meets RNAi.
Cell research 2009;19(3):282-95.
2009: Mickaël Durand-Dubief; Karl Ekwall
Chromatin immunoprecipitation using microarrays.
Methods in molecular biology (Clifton, N.J.) 2009;529():279-95.
2008: Elizabeth H Bayne; Manuela Portoso; alexander kagansky; Isabelle C Kos-Braun; Takeshi Urano; Karl Ekwall; Flavia Alves; Juri Rappsilber; Robin C Allshire
Splicing factors facilitate RNAi-directed silencing in fission yeast.
Science (New York, N.Y.) 2008;322(5901):602-6.
2008: Mickaël Durand-Dubief; Karl Ekwall
Heterochromatin tells CENP-A where to go.
BioEssays : news and reviews in molecular, cellular and developmental biology 2008;30(6):526-9.
2008: Ingela Djupedal; Karl Ekwall
Molecular biology. The paradox of silent heterochromatin.
Science (New York, N.Y.) 2008;320(5876):624-5.
2007: Elaine M Dunleavy; Alison L Pidoux; Marie Monet; Carolina Bonilla; William Richardson; Georgina L Hamilton; Karl Ekwall; Paul J McLaughlin; Robin C Allshire
A NASP (N1/N2)-related protein, Sim3, binds CENP-A and is required for its deposition at fission yeast centromeres.
Molecular cell 2007;28(6):1029-44.
2007: erwan lejeune; Miriam Bortfeld; Sharon A White; Alison L Pidoux; Karl Ekwall; Robin C Allshire; Andreas G Ladurner
The chromatin-remodeling factor FACT contributes to centromeric heterochromatin independently of RNAi.
Current biology : CB 2007;17(14):1219-24.
2007: Julian Walfridsson; Olga Khorosjutina; Paulina Wanrooij; Claes M Gustafsson; Karl Ekwall
A genome-wide role for CHD remodelling factors and Nap1 in nucleosome disassembly.
The EMBO journal 2007;26(12):2868-79.
2007: Mickaël Durand-Dubief; Indranil Sinha; Fredrik Fagerström-Billai; Carolina Bonilla; Anthony Wright; Michael Grunstein; Karl Ekwall
Specific functions for the fission yeast Sirtuins Hst2 and Hst4 in gene regulation and retrotransposon silencing.
The EMBO journal 2007;26(10):2477-88.
2007: Sara Isaac; Julian Walfridsson; Tal Zohar; David Lazar; Tamar Kahan; Karl Ekwall; Amikam Cohen
Interaction of Epe1 with the heterochromatin assembly pathway in Schizosaccharomyces pombe.
Genetics 2007;175(4):1549-60.
2007: Fredrik Fagerström-Billai; Mikaël Durand-Dubief; Karl Ekwall; Anthony P H Wright
Individual subunits of the Ssn6-Tup11/12 corepressor are selectively required for repression of different target genes.
Molecular and cellular biology 2007;27(3):1069-82.
2007: Karl Ekwall
Epigenetic control of centromere behavior.
Annual review of genetics 2007;41():63-81.
2007: Michael Opel; David Lando; Carolina Bonilla; Sarah C Trewick; Abdelhalim Boukaba; Julian Walfridsson; James Cauwood; Petra J H Werler; Antony M Carr; Tony Kouzarides; Natalia V Murzina; Robin C Allshire; Karl Ekwall; Ernest D Laue
Genome-wide studies of histone demethylation catalysed by the fission yeast homologues of mammalian LSD1.
PloS one 2007;2(4):e386.
2006: Xuefeng Zhu; Marianna Wirén; Indranil Sinha; Nina N Rasmussen; Tomas Linder; Steen Holmberg; Karl Ekwall; Claes M Gustafsson
Genome-wide occupancy profile of mediator and the Srb8-11 module reveals interactions with coding regions.
Molecular cell 2006;22(2):169-78.
2006: Indranil Sinha; Marianna Wirén; Karl Ekwall
Genome-wide patterns of histone modifications in fission yeast.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2006;14(1):95-105.
2005: Karl Ekwall
Genome-wide analysis of HDAC function.
Trends in genetics : TIG 2005;21(11):608-15.
2005: Vera Schramke; Daniel M Sheedy; Ahmet M Denli; Carolina Bonila; Karl Ekwall; Gregory J Hannon; Robin C Allshire
Retraction: RNA-interference-directed chromatin modification coupled to RNA polymerase II transcription.
Nature 2005;437(7061):1057.
2005: Ingela Djupedal; Manuela Portoso; Henrik Spåhr; Carolina Bonilla; Claes M Gustafsson; Robin C Allshire; Karl Ekwall
RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing.
Genes & development 2005;19(19):2301-6.
2005: Marianna Wirén; Rebecca A Silverstein; Indranil Sinha; Julian Walfridsson; Hang-Mao Lee; Patricia Laurenson; Lorraine Pillus; Daniel Robyr; Michael Grunstein; Karl Ekwall
Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast.
The EMBO journal 2005;24(16):2906-18.
2005: Vera Schramke; Daniel M Sheedy; Ahmet M Denli; Carolina Bonila; Karl Ekwall; Gregory J Hannon; Robin C Allshire
RNA-interference-directed chromatin modification coupled to RNA polymerase II transcription.
Nature 2005;435(7046):1275-9.
2005: Julian Walfridsson; Pernilla Bjerling; Maria Thalen; Eung Jae Yoo; Sang Dai Park; Karl Ekwall
The CHD remodeling factor Hrp1 stimulates CENP-A loading to centromeres.
Nucleic acids research 2005;33(9):2868-79.
2005: Rebecca A Silverstein; Karl Ekwall
Sin3: a flexible regulator of global gene expression and genome stability.
Current genetics 2005;47(1):1-17.
2004: Jon B Carmichael; Patrick Provost; Karl Ekwall; Tom C Hobman
ago1 and dcr1, two core components of the RNA interference pathway, functionally diverge from rdp1 in regulating cell cycle events in Schizosaccharomyces pombe.
Molecular biology of the cell 2004;15(3):1425-35.
2004: Karl Ekwall
The RITS complex-A direct link between small RNA and heterochromatin.
Molecular cell 2004;13(3):304-5.
2004: Yongtao Xue; Stefan A Haas; Laurent Brino; Arief Gusnanto; Mark Reimers; Driss Talibi; Martin Vingron; Karl Ekwall; Anthony P H Wright
A DNA microarray for fission yeast: minimal changes in global gene expression after temperature shift.
Yeast (Chichester, England) 2004;21(1):25-39.
2004: Pernilla Bjerling; Karl Ekwall; Richard Egel; Geneviève Thon
A novel type of silencing factor, Clr2, is necessary for transcriptional silencing at various chromosomal locations in the fission yeast Schizosaccharomyces pombe.
Nucleic acids research 2004;32(15):4421-8.
2003: Henrik Appelgren; Barbara Kniola; Karl Ekwall
Distinct centromere domain structures with separate functions demonstrated in live fission yeast cells.
Journal of cell science 2003;116(Pt 19):4035-42.
2003: Anna L Okorokova-Façanha; Lev A Okorokov; Karl Ekwall
An inventory of the P-type ATPases in the fission yeast Schizosaccharomyces pombe.
Current genetics 2003;43(4):273-80.
2003: Jun-Ichi Nakayama; Guoping Xiao; Ken-ichi Noma; Asra Malikzay; Pernilla Bjerling; Karl Ekwall; Ryuji Kobayashi; Shiv I S Grewal
Alp13, an MRG family protein, is a component of fission yeast Clr6 histone deacetylase required for genomic integrity.
The EMBO journal 2003;22(11):2776-87.
2003: Rebecca A Silverstein; Karl Ekwall
Similar mechanisms drive centromeric silencing and gene repression.
Cell cycle (Georgetown, Tex.) 2003;2(2):73-5.
2003: Rebecca A Silverstein; William Richardson; Henry Levin; Robin C Allshire; Karl Ekwall
A new role for the transcriptional corepressor SIN3; regulation of centromeres.
Current biology : CB 2003;13(1):68-72.
2002: Patrick Provost; Rebecca A Silverstein; David Dishart; Julian Walfridsson; Ingela Djupedal; Barbara Kniola; Anthony Wright; Bengt Samuelsson; Olof Radmark; Karl Ekwall
Dicer is required for chromosome segregation and gene silencing in fission yeast cells.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(26):16648-53.
2002: Eung Jae Yoo; Yeun Kyu Jang; Myung Ae Lee; Pernilla Bjerling; Jae Bum Kim; Karl Ekwall; Rho Hyun Seong; Sang Dai Park
Hrp3, a chromodomain helicase/ATPase DNA binding protein, is required for heterochromatin silencing in fission yeast.
Biochemical and biophysical research communications 2002;295(4):970-4.
2002: Anna L Okorokova Façanha; Henrik Appelgren; Mohammad Tabish; Lev A Okorokov; Karl Ekwall
The endoplasmic reticulum cation P-type ATPase Cta4p is required for control of cell shape and microtubule dynamics.
The Journal of cell biology 2002;157(6):1029-39.
2002: Pernilla Bjerling; Karl Ekwall
Centromere domain organization and histone modifications.
Brazilian journal of medical and biological research = Revista brasileira de pesquisas médicas e biológicas / Sociedade Brasileira de Biofísica ... [et al.] 2002;35(5):499-507.
2002: Pernilla Bjerling; Rebecca A Silverstein; Geneviève Thon; Amy Caudy; Shiv Grewal; Karl Ekwall
Functional divergence between histone deacetylases in fission yeast by distinct cellular localization and in vivo specificity.
Molecular and cellular biology 2002;22(7):2170-81.
2001: Barbara Kniola; E O'Toole; J Richard McIntosh; Barbara G Mellone; Robin C Allshire; S Mengarelli; K Hultenby; Karl Ekwall
The domain structure of centromeres is conserved from fission yeast to humans.
Molecular biology of the cell 2001;12(9):2767-75.
2000: Eung Jae Yoo; YH Jin; Yeun Kyu Jang; Pernilla Bjerling; Mohammad Tabish; Seung Hwan Hong; Karl Ekwall; Sang Dai Park
Fission yeast hrp1, a chromodomain ATPase, is required for proper chromosome segregation and its overexpression interferes with chromatin condensation.
Nucleic acids research 2000;28(9):2004-11.
1999: Karl Ekwall; G Cranston; Robin C Allshire
Fission yeast mutants that alleviate transcriptional silencing in centromeric flanking repeats and disrupt chromosome segregation.
Genetics 1999;153(3):1153-69.
1999: T G Olsson; R A Silverstein; Karl Ekwall; Per Sunnerhagen
Transient inhibition of histone deacetylase activity overcomes silencing in the mating-type region in fission yeast.
Current genetics 1999;35(2):82-7.
1999: David VanDinh Dang; M J Benedik; Karl Ekwall; J Choi; Robin C Allshire; Henry L Levin
A new member of the Sin3 family of corepressors is essential for cell viability and required for retroelement propagation in fission yeast.
Molecular and cellular biology 1999;19(3):2351-65.
1998: T G Olsson; Karl Ekwall; Robin C Allshire; Per Sunnerhagen; Janet F Partridge; W A Richardson
Genetic characterisation of hda1+, a putative fission yeast histone deacetylase gene.
Nucleic acids research 1998;26(13):3247-54.
1997: Karl Ekwall; T Olsson; B M Turner; G Cranston; Robin C Allshire
Transient inhibition of histone deacetylation alters the structural and functional imprint at fission yeast centromeres.
Cell 1997;91(7):1021-32.
1996: Karl Ekwall; Elaine R Nimmo; Jean-Paul Javerzat; B Borgstrøm; R Egel; G Cranston; Robin C Allshire
Mutations in the fission yeast silencing factors clr4+ and rik1+ disrupt the localisation of the chromo domain protein Swi6p and impair centromere function.
Journal of cell science 1996;109 ( Pt 11)():2637-48.
1995: Karl Ekwall; Jean-Paul Javerzat; A Lorentz; H Schmidt; G Cranston; Robin C Allshire
The chromodomain protein Swi6: a key component at fission yeast centromeres.
Science (New York, N.Y.) 1995;269(5229):1429-31.
1995: Robin C Allshire; Elaine R Nimmo; Karl Ekwall; Jean-Paul Javerzat; G Cranston
Mutations derepressing silent centromeric domains in fission yeast disrupt chromosome segregation.
Genes & development 1995;9(2):218-33.