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Hans Ellegren

Research Profile

Phenomena

Evolution, Molecular

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Sex Chromosomes

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Publications

TOP 3
Ammon Corl; Hans Ellegren
Sampling strategies for species trees: the effects on phylogenetic inference of the number of genes, number of individuals, and whether loci are mitochondrial, sex-linked, or autosomal.
Sofia Adolfsson; Hans Ellegren
Lack of dosage compensation accompanies the arrested stage of sex chromosome evolution in ostriches.
John Parsch; Hans Ellegren
The evolutionary causes and consequences of sex-biased gene expression.

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All Publications

2013: Ammon Corl; Hans Ellegren
Sampling strategies for species trees: the effects on phylogenetic inference of the number of genes, number of individuals, and whether loci are mitochondrial, sex-linked, or autosomal.
Molecular phylogenetics and evolution 2013;67(2):358-66.
2013: Sofia Adolfsson; Hans Ellegren
Lack of dosage compensation accompanies the arrested stage of sex chromosome evolution in ostriches.
Molecular biology and evolution 2013;30(4):806-10.
2013: John Parsch; Hans Ellegren
The evolutionary causes and consequences of sex-biased gene expression.
Nature reviews. Genetics 2013;14(2):83-7.
2013: Benoit Nabholz; Hans Ellegren; Jochen B W Wolf
High levels of gene expression explain the strong evolutionary constraint of mitochondrial protein-coding genes.
Molecular biology and evolution 2013;30(2):272-84.
2013: Carina F Mugal; Benoit Nabholz; Hans Ellegren
Genome-wide analysis in chicken reveals that local levels of genetic diversity are mainly governed by the rate of recombination.
BMC genomics 2013;14():86.
2013: Niclas Backström; Glenn-Peter Saetre; Hans Ellegren
Inferring the demographic history of European Ficedula flycatcher populations.
BMC evolutionary biology 2013;13():2.
2012: Hans Ellegren; Takeshi Kawakami; Axel Künstner; Hannu Mäkinen; Krystyna Nadachowska-Brzyska; Pall I Olason; Anna Qvarnström; Linnéa Smeds; Severin Uebbing; Niclas Backström; Reto Burri; Jochen B W Wolf
The genomic landscape of species divergence in Ficedula flycatchers.
Nature 2012;491(7426):756-60.
2012: Ulrich Knief; Holger Schielzeth; Hans Ellegren; Bart Kempenaers; Wolfgang Forstmeier
QTL and quantitative genetic analysis of beak morphology reveals patterns of standing genetic variation in an Estrildid finch.
Molecular ecology 2012;21(15):3704-17.
2012: Ammon Corl; Hans Ellegren
The genomic signature of sexual selection in the genetic diversity of the sex chromosomes and autosomes.
Evolution; international journal of organic evolution 2012;66(7):2138-49.
2012: Wolfgang Forstmeier; Jakob C Mueller; Holger Schielzeth; Hans Ellegren; Bart Kempenaers
Heterozygosity-fitness correlations in zebra finches: microsatellite markers can be better than their reputation.
Molecular ecology 2012;21(13):3237-49.
2012: Kiwoong Nam; Hans Ellegren
Recombination drives vertebrate genome contraction.
PLoS genetics 2012;8(5):e1002680.
2011: Hans Ellegren
Emergence of male-biased genes on the chicken Z-chromosome: sex-chromosome contrasts between male and female heterogametic systems.
Genome research 2011;21(12):2082-6.
2011: Axel Künstner; Benoit Nabholz; Hans Ellegren
Evolutionary constraint in flanking regions of avian genes.
Molecular biology and evolution 2011;28(9):2481-9.
2011: Benoit Nabholz; Rui Wang; Erich D Jarvis; Axel Künstner; Hans Ellegren
Dynamic evolution of base composition: causes and consequences in avian phylogenomics.
Molecular biology and evolution 2011;28(8):2197-210.
2011: Hans Ellegren
The singing genome.
Heredity 2011;106(4):533-4.
2011: Hans Ellegren
Sex-chromosome evolution: recent progress and the influence of male and female heterogamety.
Nature reviews. Genetics 2011;12(3):157-66.
2011: Carina F Mugal; Hans Ellegren
Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content.
Genome biology 2011;12(6):R58.
2011: Amber M Rice; Andreas Rudh; Hans Ellegren; Anna Qvarnström
A guide to the genomics of ecological speciation in natural animal populations.
Ecology letters 2011;14(1):9-18.
2010: Niclas Backström; Johan Lindell; Yu Zhang; Eleftheria Palkopoulou; Anna Qvarnström; Glenn-Peter Saetre; Hans Ellegren
A high-density scan of the Z chromosome in Ficedula flycatchers reveals candidate loci for diversifying selection.
Evolution; international journal of organic evolution 2010;64(12):3461-75.
2010: Benoit Nabholz; Erich D Jarvis; Hans Ellegren
Obtaining mtDNA genomes from next-generation transcriptome sequencing: a case study on the basal Passerida (Aves: Passeriformes) phylogeny.
Molecular phylogenetics and evolution 2010;57(1):466-70.
2010: Wolfgang Forstmeier; Hans Ellegren
Trisomy and triploidy are sources of embryo mortality in the zebra finch.
Proceedings. Biological sciences / The Royal Society 2010;277(1694):2655-60.
2010: Niclas Backström; Eleftheria Palkopoulou; Anna Qvarnström; Hans Ellegren
No evidence for Z-chromosome rearrangements between the pied flycatcher and the collared flycatcher as judged by gene-based comparative genetic maps.
Molecular ecology 2010;19(16):3394-405.
2010: Judith E Mank; Kiwoong Nam; Björn Brunström; Hans Ellegren
Ontogenetic complexity of sexual dimorphism and sex-specific selection.
Molecular biology and evolution 2010;27(7):1570-8.
2010: Anna Qvarnström; Amber M Rice; Hans Ellegren
Speciation in Ficedula flycatchers.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2010;365(1547):1841-52.
2010: Hans Ellegren
'The Origin of Species--150 Years Later', June 2009, Fiskebäckskil, Sweden.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2010;365(1547):1715.
2010: Hans Ellegren
Evolutionary stasis: the stable chromosomes of birds.
Trends in ecology & evolution 2010;25(5):283-91.
2010: Niclas Backström; Wolfgang Forstmeier; Holger Schielzeth; Harriet Mellenius; Kiwoong Nam; Elisabeth Bolund; Matthew T Webster; Torbjörn Ost; Melanie Schneider; Bart Kempenaers; Hans Ellegren
The recombination landscape of the zebra finch Taeniopygia guttata genome.
Genome research 2010;20(4):485-95.
2010: Martin Völker; Niclas Backström; Benjamin M Skinner; Elizabeth J Langley; Sydney K Bunzey; Hans Ellegren; Darren K Griffin
Copy number variation, chromosome rearrangement, and their association with recombination during avian evolution.
Genome research 2010;20(4):503-11.
2010: Axel Künstner; Jochen B W Wolf; Niclas Backström; Osceola Whitney; Christopher N Balakrishnan; Lainy Day; Scott V Edwards; Daniel E Janes; Barney A Schlinger; Richard K Wilson; Erich D Jarvis; Wesley C Warren; Hans Ellegren
Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.
Molecular ecology 2010;19 Suppl 1():266-76.
2010: Diethard Tautz; Hans Ellegren; Detlef Weigel
Next generation molecular ecology.
Molecular ecology 2010;19 Suppl 1():1-3.
2010: Judith E Mank; Kiwoong Nam; Hans Ellegren
Faster-Z evolution is predominantly due to genetic drift.
Molecular biology and evolution 2010;27(3):661-70.
2010: Kiwoong Nam; Carina Mugal; Benoit Nabholz; Holger Schielzeth; Jochen B W Wolf; Niclas Backström; Axel Künstner; Christopher N Balakrishnan; Andreas Heger; Chris P Ponting; David F Clayton; Hans Ellegren
Molecular evolution of genes in avian genomes.
Genome biology 2010;11(6):R68.
2010: C F Mugal; J B W Wolf; H H von Grünberg; Hans Ellegren
Conservation of neutral substitution rate and substitutional asymmetries in mammalian genes.
Genome biology and evolution 2010;2():19-28.
2010: Jaime Lira; Anna Linderholm; Carmen Olaria; Mikael Brandström Durling; M Thomas P Gilbert; Hans Ellegren; Eske Willerslev; Kerstin Lidén; Juan Luis Arsuaga Ferreras; Anders Gotherstrom
Ancient DNA reveals traces of Iberian Neolithic and Bronze Age lineages in modern Iberian horses.
Molecular ecology 2010;19(1):64-78.
2009: J E Mank; Hans Ellegren
Sex bias in gene expression is not the same as dosage compensation.
Heredity 2009;103(5):434.
2009: Hans Ellegren
Sex determination: two copies for one cock.
Current biology : CB 2009;19(19):R909-10.
2009: Judith E Mank; Hans Ellegren
Are sex-biased genes more dispensable?
Biology letters 2009;5(3):409-12.
2009: Hans Ellegren
The different levels of genetic diversity in sex chromosomes and autosomes.
Trends in genetics : TIG 2009;25(6):278-84.
2009: Judith E Mank; Hans Ellegren
Sex-linkage of sexually antagonistic genes is predicted by female, but not male, effects in birds.
Evolution; international journal of organic evolution 2009;63(6):1464-72.
2009: Erik Axelsson; Hans Ellegren
Quantification of adaptive evolution of genes expressed in avian brain and the population size effect on the efficacy of selection.
Molecular biology and evolution 2009;26(5):1073-9.
2009: Jenny Hagenblad; Maria Olsson; Heidi G Parker; Elaine A Ostrander; Hans Ellegren
Population genomics of the inbred Scandinavian wolf.
Molecular ecology 2009;18(7):1341-51.
2009: Hans Ellegren
A selection model of molecular evolution incorporating the effective population size.
Evolution; international journal of organic evolution 2009;63(2):301-5.
2009: Hans Ellegren
Genomic evidence for a large-Z effect.
Proceedings. Biological sciences / The Royal Society 2009;276(1655):361-6.
2009: Jochen B W Wolf; Axel Künstner; Kiwoong Nam; Mattias Jakobsson; Hans Ellegren
Nonlinear dynamics of nonsynonymous (dN) and synonymous (dS) substitution rates affects inference of selection.
Genome biology and evolution 2009;1():308-19.
2009: Hans Ellegren
Is genetic diversity really higher in large populations?
Journal of biology 2009;8(4):41.
2008: Mikael Brandström; Andrew T Bagshaw; Neil J Gemmell; Hans Ellegren
The relationship between microsatellite polymorphism and recombination hot spots in the human genome.
Molecular biology and evolution 2008;25(12):2579-87.
2008: Hans Ellegren
Comparative genomics and the study of evolution by natural selection.
Molecular ecology 2008;17(21):4586-96.
2008: Sofia Berlin; Lujiang Qu; Hans Ellegren
Adaptive evolution of gamete-recognition proteins in birds.
Journal of molecular evolution 2008;67(5):488-96.
2008: Sofia Berlin; Lujiang Qu; Xianyao Li; Ning Yang; Hans Ellegren
Positive diversifying selection in avian Mx genes.
Immunogenetics 2008;60(11):689-97.
2008: Kiwoong Nam; Hans Ellegren
The chicken (Gallus gallus) Z chromosome contains at least three nonlinear evolutionary strata.
Genetics 2008;180(2):1131-6.
2008: Ulo Väli; Annika Einarsson; Lisette Waits; Hans Ellegren
To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations?
Molecular ecology 2008;17(17):3808-17.
2008: Hans Ellegren
Sex chromosomes: platypus genome suggests a recent origin for the human X.
Current biology : CB 2008;18(13):R557-9.
2008: Niclas Backström; Nikoletta Karaiskou; Erica H Leder; Lars Gustafsson; Craig R Primmer; Anna Qvarnström; Hans Ellegren
A gene-based genetic linkage map of the collared flycatcher (Ficedula albicollis) reveals extensive synteny and gene-order conservation during 100 million years of avian evolution.
Genetics 2008;179(3):1479-95.
2008: Erik Axelsson; Lina Hultin-Rosenberg; Mikael Brandström; Martin Zwahlén; David F Clayton; Hans Ellegren
Natural selection in avian protein-coding genes expressed in brain.
Molecular ecology 2008;17(12):3008-17.
2008: Mikael Brandström; Hans Ellegren
Genome-wide analysis of microsatellite polymorphism in chicken circumventing the ascertainment bias.
Genome research 2008;18(6):881-7.
2008: Hans Ellegren
Sequencing goes 454 and takes large-scale genomics into the wild.
Molecular ecology 2008;17(7):1629-31.
2008: Hans Ellegren; Ben Sheldon
Genetic basis of fitness differences in natural populations.
Nature 2008;452(7184):169-75.
2008: Niclas Backström; Sofie Fagerberg; Hans Ellegren
Genomics of natural bird populations: a gene-based set of reference markers evenly spread across the avian genome.
Molecular ecology 2008;17(4):964-80.
2008: Judith E Mank; Lina Hultin-Rosenberg; Matthew T Webster; Hans Ellegren
The unique genomic properties of sex-biased genes: insights from avian microarray data.
BMC genomics 2008;9():148.
2008: Ulo Väli; Mikael Brandström; Malin Johansson; Hans Ellegren
Insertion-deletion polymorphisms (indels) as genetic markers in natural populations.
BMC genetics 2008;9():8.
2008: Judith E Mank; Lina Hultin-Rosenberg; Martin Zwahlen; Hans Ellegren
Pleiotropic constraint hampers the resolution of sexual antagonism in vertebrate gene expression.
The American naturalist 2008;171(1):35-43.
2007: Judith E Mank; Lina Hultin-Rosenberg; Erik Axelsson; Hans Ellegren
Rapid evolution of female-biased, but not male-biased, genes expressed in the avian brain.
Molecular biology and evolution 2007;24(12):2698-706.
2007: Hans Ellegren; John Parsch
The evolution of sex-biased genes and sex-biased gene expression.
Nature reviews. Genetics 2007;8(9):689-98.
2007: Steinar Engen; Thor Harald Ringsby; Bernt-Erik Saether; Russell Lande; Henrik Jensen; Magnar Lillegård; Hans Ellegren
Effective size of fluctuating populations with two sexes and overlapping generations.
Evolution; international journal of organic evolution 2007;61(8):1873-85.
2007: Judith E Mank; Hans Ellegren
Parallel divergence and degradation of the avian W sex chromosome.
Trends in ecology & evolution 2007;22(8):389-91.
2007: Mikael Brandström; Hans Ellegren
The genomic landscape of short insertion and deletion polymorphisms in the chicken (Gallus gallus) Genome: a high frequency of deletions in tandem duplicates.
Genetics 2007;176(3):1691-701.
2007: Hans Ellegren
Evolutionary genomics: a dinosaur's view of genome-size evolution.
Current biology : CB 2007;17(12):R470-2.
2007: Judith E Mank; Erik Axelsson; Hans Ellegren
Fast-X on the Z: rapid evolution of sex-linked genes in birds.
Genome research 2007;17(5):618-24.
2007: Hans Ellegren
Characteristics, causes and evolutionary consequences of male-biased mutation.
Proceedings. Biological sciences / The Royal Society 2007;274(1606):1-10.
2007: Hans Ellegren; Lina Hultin-Rosenberg; Björn Brunström; Lennart Dencker; Kim Kultima; Birger Scholz
Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes.
BMC biology 2007;5():40.
2007: Vera B Kaiser; Marcel van Tuinen; Hans Ellegren
Insertion events of CR1 retrotransposable elements elucidate the phylogenetic branching order in galliform birds.
Molecular biology and evolution 2007;24(1):338-47.
2006: Niclas Backström; Anna Qvarnström; Lars Gustafsson; Hans Ellegren
Levels of linkage disequilibrium in a wild bird population.
Biology letters 2006;2(3):435-8.
2006: Vera B Kaiser; Hans Ellegren
Nonrandom distribution of genes with sex-biased expression in the chicken genome.
Evolution; international journal of organic evolution 2006;60(9):1945-51.
2006: Niclas Backström; Mikael Brandström; Lars Gustafsson; Anna Qvarnström; Hans Cheng; Hans Ellegren
Genetic mapping in a natural population of collared flycatchers (Ficedula albicollis): conserved synteny but gene order rearrangements on the avian Z chromosome.
Genetics 2006;174(1):377-86.
2006: Frank Hailer; Björn Helander; Alv O Folkestad; Sergei A Ganusevich; Steinar Garstad; Peter Hauff; Christian Koren; Torgeir Nygård; Veljo Volke; Carles Vilà; Hans Ellegren
Bottlenecked but long-lived: high genetic diversity retained in white-tailed eagles upon recovery from population decline.
Biology letters 2006;2(2):316-9.
2006: Matthew T Webster; Erik Axelsson; Hans Ellegren
Strong regional biases in nucleotide substitution in the chicken genome.
Molecular biology and evolution 2006;23(6):1203-16.
2006: Sofia Berlin; Mikael Brandström; Niclas Backström; Erik Axelsson; Nick G C Smith; Hans Ellegren
Substitution rate heterogeneity and the male mutation bias.
Journal of molecular evolution 2006;62(2):226-33.
2006: Anna-Karin Sundqvist; Susanne Björnerfeldt; Jennifer A Leonard; Frank Hailer; Ake Hedhammar; Hans Ellegren; Carles Vilà
Unequal contribution of sexes in the origin of dog breeds.
Genetics 2006;172(2):1121-8.
2006: Sofia Berlin; Hans Ellegren
Fast accumulation of nonsynonymous mutations on the female-specific W chromosome in birds.
Journal of molecular evolution 2006;62(1):66-72.
2005: Hans Ellegren
Genomics: the dog has its day.
Nature 2005;438(7069):745-6.
2005: Hans Ellegren
Evolution: natural selection in the evolution of humans and chimps.
Current biology : CB 2005;15(22):R919-22.
2005: Anders Gotherstrom; Cecilia Anderung; Linda Hellborg; Rengert Elburg; Colin Smith; Dan G Bradley; Hans Ellegren
Cattle domestication in the Near East was followed by hybridization with aurochs bulls in Europe.
Proceedings. Biological sciences / The Royal Society 2005;272(1579):2345-50.
2005: Eva Hedmark; Hans Ellegren
Microsatellite genotyping of DNA isolated from claws left on tanned carnivore hides.
International journal of legal medicine 2005;119(6):370-3.
2005: Niclas Backström; Helene Ceplitis; Sofia Berlin; Hans Ellegren
Gene conversion drives the evolution of HINTW, an ampliconic gene on the female-specific avian W chromosome.
Molecular biology and evolution 2005;22(10):1992-9.
2005: K T Berggren; Hans Ellegren; G M Hewitt; J M Seddon
Understanding the phylogeographic patterns of European hedgehogs, Erinaceus concolor and E. europaeus using the MHC.
Heredity 2005;95(1):84-90.
2005: Cecilia Anderung; Abigail Bouwman; Per Persson; José Miguel Carretero; Ana Isabel Ortega; Rengert Elburg; Colin Smith; Juan Luis Arsuaga Ferreras; Hans Ellegren; Anders Gotherstrom
Prehistoric contacts over the Straits of Gibraltar indicated by genetic analysis of Iberian Bronze Age cattle.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(24):8431-5.
2005: Matthew T Webster; Nick G C Smith; Lina Hultin-Rosenberg; Peter Arndt; Hans Ellegren
Male-driven biased gene conversion governs the evolution of base composition in human alu repeats.
Molecular biology and evolution 2005;22(6):1468-74.
2005: Hans Ellegren
The avian genome uncovered.
Trends in ecology & evolution 2005;20(4):180-6.
2005: Carles Vilà; Jennifer M Seddon; Hans Ellegren
Genes of domestic mammals augmented by backcrossing with wild ancestors.
Trends in genetics : TIG 2005;21(4):214-8.
2005: Jennifer M Seddon; H G Parker; Elaine A Ostrander; Hans Ellegren
SNPs in ecological and conservation studies: a test in the Scandinavian wolf population.
Molecular ecology 2005;14(2):503-11.
2005: Erik Axelsson; Matthew T Webster; Nick G C Smith; David W Burt; Hans Ellegren
Comparison of the chicken and turkey genomes reveals a higher rate of nucleotide divergence on microchromosomes than macrochromosomes.
Genome research 2005;15(1):120-5.
2004: Sofia Berlin; Hans Ellegren
Chicken W: a genetically uniform chromosome in a highly variable genome.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(45):15967-9.
2004: Jennifer M Seddon; Hans Ellegren
A temporal analysis shows major histocompatibility complex loci in the Scandinavian wolf population are consistent with neutral evolution.
Proceedings. Biological sciences / The Royal Society 2004;271(1554):2283-91.
2004: Nick G C Smith; Mikael Brandström; Hans Ellegren
Evidence for turnover of functional noncoding DNA in mammalian genome evolution.
Genomics 2004;84(5):806-13.
2004: Matthew T Webster; Nick G C Smith; Martin J Lercher; Hans Ellegren
Gene expression, synteny, and local similarity in human noncoding mutation rates.
Molecular biology and evolution 2004;21(10):1820-30.
2004: Erik Axelsson; Nick G C Smith; Hannah Sundström; Sofia Berlin; Hans Ellegren
Male-biased mutation rate and divergence in autosomal, z-linked and w-linked introns of chicken and Turkey.
Molecular biology and evolution 2004;21(8):1538-47.
2004: Peter Saetre; Julia Lindberg; Jennifer A Leonard; Kerstin Olsson; Ulf Pettersson; Hans Ellegren; Tomas F Bergström; Carles Vilà; Elena Jazin
From wild wolf to domestic dog: gene expression changes in the brain.
Brain research. Molecular brain research 2004;126(2):198-206.
2004: Hans Ellegren
Microsatellites: simple sequences with complex evolution.
Nature reviews. Genetics 2004;5(6):435-45.
2004: Hannah Sundström; Matthew T Webster; Hans Ellegren
Reduced variation on the chicken Z chromosome.
Genetics 2004;167(1):377-85.
2004: Lori J Lawson Handley; Helene Ceplitis; Hans Ellegren
Evolutionary strata on the chicken Z chromosome: implications for sex chromosome evolution.
Genetics 2004;167(1):367-76.
2004: Gabriella Lindgren; Niclas Backström; June Swinburne; Linda Hellborg; Annika Einarsson; Kaj Sandberg; Gus Cothran; Carles Vilà; Matthew Binns; Hans Ellegren
Limited number of patrilines in horse domestication.
Nature genetics 2004;36(4):335-6.
2004: Sofia Berlin; Nick G C Smith; Hans Ellegren
Do avian mitochondria recombine?
Journal of molecular evolution 2004;58(2):163-7.
2004: Helene Ceplitis; Hans Ellegren
Adaptive molecular evolution of HINTW, a female-specific gene in birds.
Molecular biology and evolution 2004;21(2):249-54.
2004: Jesper Brohede; Anders P Møller; Hans Ellegren
Individual variation in microsatellite mutation rate in barn swallows.
Mutation research 2004;545(1-2):73-80.
2004: Linda Hellborg; Hans Ellegren
Low levels of nucleotide diversity in mammalian Y chromosomes.
Molecular biology and evolution 2004;21(1):158-63.
2004: Jesper Brohede; Norman Arnheim; Hans Ellegren
Single-molecule analysis of the hypermutable tetranucleotide repeat locus D21S1245 through sperm genotyping: a heterogeneous pattern of mutation but no clear male age effect.
Molecular biology and evolution 2004;21(1):58-64.
2003: Hans Ellegren; Nick G C Smith; Matthew T Webster
Mutation rate variation in the mammalian genome.
Current opinion in genetics & development 2003;13(6):562-8.
2003: Henrik Jensen; Bernt-Erik Saether; Thor Harald Ringsby; Jarle Tufto; S C Griffith; Hans Ellegren
Sexual variation in heritability and genetic correlations of morphological traits in house sparrow (Passer domesticus).
Journal of evolutionary biology 2003;16(6):1296-307.
2003: Anna Bartosch-Härlid; Sofia Berlin; Nick G C Smith; Anders P Møller; Hans Ellegren
Life history and the male mutation bias.
Evolution; international journal of organic evolution 2003;57(10):2398-406.
2003: Eli Knispel Rueness; Per Erik Jorde; Linda Hellborg; Nils Chr Stenseth; Hans Ellegren; Kjetill S Jakobsen
Cryptic population structure in a large, mobile mammalian predator: the Scandinavian lynx.
Molecular ecology 2003;12(10):2623-33.
2003: Eli Knispel Rueness; Nils Chr Stenseth; Mark O'Donoghue; Stan Boutin; Hans Ellegren; Kjetill S Jakobsen
Ecological and genetic spatial structuring in the Canadian lynx.
Nature 2003;425(6953):69-72.
2003: Hannah Sundström; Matthew T Webster; Hans Ellegren
Is the rate of insertion and deletion mutation male biased?: Molecular evolutionary analysis of avian and primate sex chromosome sequences.
Genetics 2003;164(1):259-68.
2003: Øystein Flagstad; C W Walker; Carles Vilà; Anna-Karin Sundqvist; B Fernholm; A K Hufthammer; Ø Wiig; I Koyola; Hans Ellegren
Two centuries of the Scandinavian wolf population: patterns of genetic variability and migration during an era of dramatic decline.
Molecular ecology 2003;12(4):869-80.
2003: Hans Ellegren; Anna-Karin Fridolfsson
Sex-specific mutation rates in salmonid fish.
Journal of molecular evolution 2003;56(4):458-63.
2003: Matthew T Webster; Nick G C Smith; Hans Ellegren
Compositional evolution of noncoding DNA in the human and chimpanzee genomes.
Molecular biology and evolution 2003;20(2):278-86.
2003: Hans Ellegren
Levels of polymorphism on the sex-limited chromosome: a clue to Y from W?
BioEssays : news and reviews in molecular, cellular and developmental biology 2003;25(2):163-7.
2003: Carles Vilà; Anna-Karin Sundqvist; Øystein Flagstad; Jennifer M Seddon; Susanne Björnerfeldt; Ilpo Kojola; Adriano Casulli; Håkan Sand; Petter Wabakken; Hans Ellegren
Rescue of a severely bottlenecked wolf (Canis lupus) population by a single immigrant.
Proceedings. Biological sciences / The Royal Society 2003;270(1510):91-7.
2003: Carles Vilà; C Walker; Anna-Karin Sundqvist; Øystein Flagstad; Z Andersone; Adriano Casulli; Ilpo Kojola; Harri Valdmann; J Halverson; Hans Ellegren
Combined use of maternal, paternal and bi-parental genetic markers for the identification of wolf-dog hybrids.
Heredity 2003;90(1):17-24.
2003: Nick G C Smith; Matthew T Webster; Hans Ellegren
A low rate of simultaneous double-nucleotide mutations in primates.
Molecular biology and evolution 2003;20(1):47-53.
2003: Linda Hellborg; Hans Ellegren
Y chromosome conserved anchored tagged sequences (YCATS) for the analysis of mammalian male-specific DNA.
Molecular ecology 2003;12(1):283-91.
2002: Laurence D Hurst; Hans Ellegren
Human genetics: mystery of the mutagenic male.
Nature 2002;420(6914):365-6.
2002: Hans Ellegren
Mismatch repair and mutational bias in microsatellite DNA.
Trends in genetics : TIG 2002;18(11):552.
2002: Jennifer M Seddon; Hans Ellegren
MHC class II genes in European wolves: a comparison with dogs.
Immunogenetics 2002;54(7):490-500.
2002: Nick G C Smith; Matthew T Webster; Hans Ellegren
Deterministic mutation rate variation in the human genome.
Genome research 2002;12(9):1350-6.
2002: Matthew T Webster; Nick G C Smith; Hans Ellegren
Microsatellite evolution inferred from human-chimpanzee genomic sequence alignments.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(13):8748-53.
2002: Hans Ellegren
Human mutation--blame (mostly) men.
Nature genetics 2002;31(1):9-10.
2002: Jesper Brohede; Craig R Primmer; Anders Møller; Hans Ellegren
Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci.
Nucleic acids research 2002;30(9):1997-2003.
2002: Hans Ellegren
Dosage compensation: do birds do it as well?
Trends in genetics : TIG 2002;18(1):25-8.
2001: H Montell; Anna-Karin Fridolfsson; Hans Ellegren
Contrasting levels of nucleotide diversity on the avian Z and W sex chromosomes.
Molecular biology and evolution 2001;18(11):2010-6.
2001: Sofia Berlin; Hans Ellegren
Evolutionary genetics. Clonal inheritance of avian mitochondrial DNA.
Nature 2001;413(6851):37-8.
2001: Anna-Karin Sundqvist; Hans Ellegren; M Olivier; Carles Vilà
Y chromosome haplotyping in Scandinavian wolves (Canis lupus) based on microsatellite markers.
Molecular ecology 2001;10(8):1959-66.
2001: Hans Ellegren; A Carmichael
Multiple and independent cessation of recombination between avian sex chromosomes.
Genetics 2001;158(1):325-31.
2001: Glenn-Peter Saetre; Thomas Borge; Johan Lindell; T Moum; Craig R Primmer; Ben Sheldon; Jon Haavie; A Johnsen; Hans Ellegren
Speciation, introgressive hybridization and nonlinear rate of molecular evolution in flycatchers.
Molecular ecology 2001;10(3):737-49.
2001: Hans Ellegren
Hens, cocks and avian sex determination. A quest for genes on Z or W?
EMBO reports 2001;2(3):192-6.
2001: Gabriella Lindgren; June Swinburne; Matthew Breen; Denis Mariat; Kaj Sandberg; Gérard Guérin; Hans Ellegren; Matthew M Binns
Physical anchorage and orientation of equine linkage groups by FISH mapping BAC clones containing microsatellite markers.
Animal genetics 2001;32(1):37-9.
2001: Carles Vilà; Jennifer A Leonard; A Gotherstrom; S Marklund; Kaj Sandberg; K Liden; Robert K Wayne; Hans Ellegren
Widespread origins of domestic horse lineages.
Science (New York, N.Y.) 2001;291(5503):474-7.
2001: Gabriella Lindgren; Matthew Breen; S Godard; AT Bowling; J Murray; M Scavone; Loren C Skow; Kaj Sandberg; Gérard Guérin; Matthew Binns; Hans Ellegren
Mapping of 13 horse genes by fluorescence in-situ hybridization (FISH) and somatic cell hybrid analysis.
Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 2001;9(1):53-9.
2001: C W Walker; Carles Vilà; A Landa; M Lindén; Hans Ellegren
Genetic variation and population structure in Scandinavian wolverine (Gulo gulo) populations.
Molecular ecology 2001;10(1):53-63.
2000: Hans Ellegren
Microsatellite mutations in the germline: implications for evolutionary inference.
Trends in genetics : TIG 2000;16(12):551-8.
2000: Sofia Berlin; Juha Merilä; Hans Ellegren
Isolation and characterization of polymorphic microsatellite loci in the common frog, Rana temporaria.
Molecular ecology 2000;9(11):1938-9.
2000: Anna-Karin Fridolfsson; Hans Ellegren
Molecular evolution of the avian CHD1 genes on the Z and W sex chromosomes.
Genetics 2000;155(4):1903-12.
2000: A N Carmichael; Anna-Karin Fridolfsson; J Halverson; Hans Ellegren
Male-biased mutation rates revealed from Z and W chromosome-linked ATP synthase alpha-subunit (ATP5A1) sequences in birds.
Journal of molecular evolution 2000;50(5):443-7.
2000: Hans Ellegren
Heterogeneous mutation processes in human microsatellite DNA sequences.
Nature genetics 2000;24(4):400-2.
2000: Birger Hörnfeldt; T Hipkiss; Anna-Karin Fridolfsson; U Eklund; Hans Ellegren
Sex ratio and fledging success of supplementary-fed Tengmalm's owl broods.
Molecular ecology 2000;9(2):187-92.
1999: Gérard Guérin; Ernest Bailey; D Bernoco; I Anderson; Douglas F Antczak; K Bell; Matthew M Binns; AT Bowling; R Brandon; Grzegorz Cholewinski; E Gus Cothran; Hans Ellegren; M Förster; S Godard; P Horin; M Ketchum; Gabriella Lindgren; H McPartlan; J C Mériaux; James R Mickelson; Lee V Millon; J Murray; A Neau; KH Røed; J Ziegle
Report of the International Equine Gene Mapping Workshop: male linkage map.
Animal genetics 1999;30(5):341-54.
1999: Jesper Brohede; Hans Ellegren
Microsatellite evolution: polarity of substitutions within repeats and neutrality of flanking sequences.
Proceedings. Biological sciences / The Royal Society 1999;266(1421):825-33.
1999: Gabriella Lindgren; H Persson; Hans Ellegren
Five equine dinucleotide microsatellite loci HTG17, HTG20, HTG21, HTG28 and HTG31.
Animal genetics 1999;30(1):70-1.
1999: Hans Ellegren
Inbreeding and relatedness in Scandinavian grey wolves Canis lupus.
Hereditas 1999;130(3):239-44.
1998: Gabriella Lindgren; Kaj Sandberg; H Persson; Stefan Marklund; Matthew Breen; B Sandgren; J Carlstén; Hans Ellegren
A primary male autosomal linkage map of the horse genome.
Genome research 1998;8(9):951-66.
1998: CR Primmer; Hans Ellegren
Patterns of molecular evolution in avian microsatellites.
Molecular biology and evolution 1998;15(8):997-1008.
1998: Anna-Karin Fridolfsson; H Cheng; N G Copeland; N A Jenkins; H C Liu; Terje Raudsepp; T Woodage; Bhanu P Chowdhary; J Halverson; Hans Ellegren
Evolution of the avian sex chromosomes from an ancestral pair of autosomes.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(14):8147-52.
1997: Hans Ellegren; Ben Sheldon
Reply from h. Ellegren and B.C. Sheldon.
Trends in ecology & evolution 1997;12(12):489-90.
1997: Anna-Karin Fridolfsson; T Hori; AK Winterø; Merete Fredholm; Martine Yerle; Annie Robic; Leif Andersson; Hans Ellegren
Expansion of the pig comparative map by expressed sequence tags (EST) mapping.
Mammalian genome : official journal of the International Mammalian Genome Society 1997;8(12):907-12.
1997: Hans Ellegren; Gabriella Lindgren; CR Primmer; A P Møller
Fitness loss and germline mutations in barn swallows breeding in Chernobyl.
Nature 1997;389(6651):593-6.
1997: Hans Ellegren; Anna-Karin Fridolfsson
Male-driven evolution of DNA sequences in birds.
Nature genetics 1997;17(2):182-4.
1997: Hans Ellegren; S Moore; N Robinson; K Byrne; W Ward; Ben Sheldon
Microsatellite evolution--a reciprocal study of repeat lengths at homologous loci in cattle and sheep.
Molecular biology and evolution 1997;14(8):854-60.
1997: Hans Ellegren; Ben Sheldon
New tools for sex identification and the study of sex allocation in birds.
Trends in ecology & evolution 1997;12(7):255-9.
1997: CR Primmer; Terje Raudsepp; Bhanu P Chowdhary; A P Møller; Hans Ellegren
Low frequency of microsatellites in the avian genome.
Genome research 1997;7(5):471-82.
1997: Matthew Breen; Gabriella Lindgren; Matthew M Binns; J Norman; Z Irvin; K Bell; Kaj Sandberg; Hans Ellegren
Genetical and physical assignments of equine microsatellites--first integration of anchored markers in horse genome mapping.
Mammalian genome : official journal of the International Mammalian Genome Society 1997;8(4):267-73.
1997: C R Primmer; Anders Pape Møller; Hans Ellegren
A wide-range survey of cross-species microsatellite amplification in birds.
Molecular ecology 1997;6(1):101.
1996: Hans Ellegren
First gene on the avian W chromosome (CHD) provides a tag for universal sexing of non-ratite birds.
Proceedings. Biological sciences / The Royal Society 1996;263(1377):1635-41.
1996: Hans Ellegren; L Gustafsson; Ben Sheldon
Sex ratio adjustment in relation to paternal attractiveness in a wild bird population.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(21):11723-8.
1996: L Marklund; M Johansson Moller; B Høyheim; W Davies; Merete Fredholm; R K Juneja; P Mariani; W Coppieters; Hans Ellegren; Leif Andersson
A comprehensive linkage map of the pig based on a wild pig-Large White intercross.
Animal genetics 1996;27(4):255-69.
1996: C R Primmer; Nicola Saino; Anders Pape Møller; Hans Ellegren
Directional evolution in germline microsatellite mutations.
Nature genetics 1996;13(4):391-3.
1996: P Mariani; Maria Moller; B Høyheim; L Marklund; W Davies; Hans Ellegren; Leif Andersson
The extension coat color locus and the loci for blood group O and tyrosine aminotransferase are on pig chromosome 6.
The Journal of heredity 1996;87(4):272-6.
1996: C R Primmer; Anders Pape Møller; Hans Ellegren
A wide-range survey of cross-species microsatellite amplification in birds.
Molecular ecology 1996;5(3):365-78.
1996: Hans Ellegren; Sofia Mikko; K Wallin; Leif Andersson
Limited polymorphism at major histocompatibility complex (MHC) loci in the Swedish moose A. alces.
Molecular ecology 1996;5(1):3-9.
1996: C R Primmer; Anders Pape Møller; Hans Ellegren
New microsatellites from the pied flycatcher Ficedula hypoleuca and the swallow Hirundo rustica genomes.
Hereditas 1996;124(3):281-3.
1995: Hans Ellegren; C R Primmer; Ben Sheldon
Microsatellite 'evolution': directionality or bias?
Nature genetics 1995;11(4):360-2.
1995: C R Primmer; Anders Pape Møller; Hans Ellegren
Resolving genetic relationships with microsatellite markers: a parentage testing system for the swallow Hirundo rustica.
Molecular ecology 1995;4(4):493-8.
1995: Hans Ellegren
Mutation rates at porcine microsatellite loci.
Mammalian genome : official journal of the International Mammalian Genome Society 1995;6(5):376-7.
1995: M Johansson; Hans Ellegren; Leif Andersson
Comparative mapping reveals extensive linkage conservation--but with gene order rearrangements--between the pig and the human genomes.
Genomics 1995;25(3):682-90.
1994: M Johansson; Hans Ellegren; L Marklund; W Coppieters; Leif Andersson
Linkage maps of porcine chromosomes 3, 6, and 9 based on 31 polymorphic markers.
Mammalian genome : official journal of the International Mammalian Genome Society 1994;5(12):785-90.
1994: Hans Ellegren; Bhanu P Chowdhary; Merete Fredholm; B Høyheim; M Johansson; P B Bräuner Nielsen; Preben D Thomsen; Leif Andersson
A physically anchored linkage map of pig chromosome 1 uncovers sex- and position-specific recombination rates.
Genomics 1994;24(2):342-50.
1994: Hans Ellegren; Bhanu P Chowdhary; M Johansson; L Marklund; Merete Fredholm; I Gustavsson; Leif Andersson
A primary linkage map of the porcine genome reveals a low rate of genetic recombination.
Genetics 1994;137(4):1089-100.
1994: Hans Ellegren; M Johansson; G Hartman; Leif Andersson
DNA fingerprinting with the human 33.6 minisatellite probe identifies sex in beavers Castor fiber.
Molecular ecology 1994;3(3):273-4.
1994: Hans Ellegren; Bhanu P Chowdhary; M Johansson; Leif Andersson
Integrating the porcine physical and linkage map using cosmid-derived markers.
Animal genetics 1994;25(3):155-64.
1994: Leif Andersson; Chris S Haley; Hans Ellegren; Sara A Knott; M Johansson; Kjell Andersson; L Andersson-Eklund; Inger Edfors-Lilja; Merete Fredholm; Ingrid Hansson
Genetic mapping of quantitative trait loci for growth and fatness in pigs.
Science (New York, N.Y.) 1994;263(5154):1771-4.
1994: Bhanu P Chowdhary; Hans Ellegren; M Johansson; Leif Andersson; I Gustavsson
In situ hybridization mapping of the growth hormone receptor (GHR) gene assigns a linkage group (C9, FS, GHR, and S0105) to chromosome 16 in pigs.
Mammalian genome : official journal of the International Mammalian Genome Society 1994;5(3):160-2.
1994: Stefan Marklund; Hans Ellegren; S Eriksson; Kaj Sandberg; Leif Andersson
Parentage testing and linkage analysis in the horse using a set of highly polymorphic microsatellites.
Animal genetics 1994;25(1):19-23.
1994: Hans Ellegren
Linkage mapping of the apolipoprotein A-I (APOA1) gene to pig chromosome 9.
Mammalian genome : official journal of the International Mammalian Genome Society 1994;5(1):58-9.
1993: Hans Ellegren
Abundant (A)n.(T)n mononucleotide repeats in the pig genome: linkage mapping of the porcine APOB, FSA, ALOX12, PEPN and RLN loci.
Animal genetics 1993;24(5):367-72.
1993: Hans Ellegren; G Hartman; M Johansson; Leif Andersson
Major histocompatibility complex monomorphism and low levels of DNA fingerprinting variability in a reintroduced and rapidly expanding population of beavers.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(17):8150-3.
1993: Hans Ellegren; Merete Fredholm; Inger Edfors-Lilja; AK Winterø; Leif Andersson
Conserved synteny between pig chromosome 8 and human chromosome 4 but rearranged and distorted linkage maps.
Genomics 1993;17(3):599-603.
1993: Hans Ellegren; C J Davies; Leif Andersson
Strong association between polymorphisms in an intronic microsatellite and in the coding sequence of the BoLA-DRB3 gene: implications for microsatellite stability and PCR-based DRB3 typing.
Animal genetics 1993;24(4):269-75.
1993: M Johansson; Bhanu P Chowdhary; F Gu; Hans Ellegren; I Gustavsson; Leif Andersson
Genetic analysis of the gene for porcine submaxillary gland mucin: physical assignment of the MUC and interferon gamma genes to chromosome 5.
The Journal of heredity 1993;84(4):259-62.
1993: Hans Ellegren; M Johansson; Bhanu P Chowdhary; Stefan Marklund; D Ruyter; L Marklund; P Bräuner-Nielsen; Inger Edfors-Lilja; I Gustavsson; R K Juneja
Assignment of 20 microsatellite markers to the porcine linkage map.
Genomics 1993;16(2):431-9.
1993: Bhanu P Chowdhary; M Johansson; R Chaudhary; Hans Ellegren; F Gu; Leif Andersson; I Gustavsson
In situ hybridization mapping and restriction fragment length polymorphism analysis of the porcine albumin (ALB) and transferrin (TF) genes.
Animal genetics 1993;24(2):85-90.
1993: U Lagercrantz; Hans Ellegren; Leif Andersson
The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates.
Nucleic acids research 1993;21(5):1111-5.
1993: Hans Ellegren
Variable SINE 3' poly(A) sequences: an abundant class of genetic markers in the pig genome.
Mammalian genome : official journal of the International Mammalian Genome Society 1993;4(8):429-34.
1993: Inger Edfors-Lilja; Hans Ellegren; AK Winterø; M Ruohonen-Lehto; Merete Fredholm; U Gustafsson; R K Juneja; Leif Andersson
A large linkage group on pig chromosome 7 including the MHC class I, class II (DQB), and class III (TNFB) genes.
Immunogenetics 1993;38(5):363-6.
1992: M Johansson; Hans Ellegren; L Marklund; U Gustavsson; E Ringmar-Cederberg; Kjell Andersson; Inger Edfors-Lilja; Leif Andersson
The gene for dominant white color in the pig is closely linked to ALB and PDGRFRA on chromosome 8.
Genomics 1992;14(4):965-9.
1992: M Johansson; Hans Ellegren; Leif Andersson
Cloning and characterization of highly polymorphic porcine microsatellites.
The Journal of heredity 1992;83(3):196-8.
1992: Hans Ellegren; Leif Andersson; M Johansson; Kaj Sandberg
DNA fingerprinting in horses using a simple (TG)n probe and its application to population comparisons.
Animal genetics 1992;23(1):1-9.
1992: Hans Ellegren; M Johansson; Kaj Sandberg; Leif Andersson
Cloning of highly polymorphic microsatellites in the horse.
Animal genetics 1992;23(2):133-42.
1992: P Mariani; M Johansson; Hans Ellegren; I Harbitz; R K Juneja; Leif Andersson
Multiple restriction fragment length polymorphisms in the porcine calcium release channel gene (CRC): assignment to the halothane (HAL) linkage group.
Animal genetics 1992;23(3):257-62.
1991: P Mariani; M Johansson; Hans Ellegren; Leif Andersson
TaqI and PvuII restriction fragment length polymorphisms at the porcine plasminogen activator, urokinase, locus (PLAU).
Animal genetics 1991;22(5):447.
1991: P Mariani; M Johansson; Hans Ellegren; Leif Andersson
A TaqI restriction fragment length polymorphism at the porcine platelet-derived growth factor beta-receptor locus (PDGFRB).
Animal genetics 1991;22(5):446.