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James Fee

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Co-Publications
Name
10
Chen, Ying
9
Sanders, Donita
7
Stout, David
5
Todaro, Thomas
5
Williams, Pamela
5
Woodruff, William
5
Pastuszyn, Andrzej
5
McRee, Duncan
4
Hunsicker-Wang, Laura
4
Luna, Eugene
4
Einarsdóttir, Olöf
4
Hill, Michael
4
Oertling, Anthony
3
Ballou, David
3
Hoffman, Brian

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Publications

TOP 3
Liu Bin; Chen Ying; Doukov Tzanko; Soltis S Michael; Stout C David; Fee James A
Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme.
Fee James A; Case David A; Noodleman Louis
Toward a chemical mechanism of proton pumping by the B-type cytochrome c oxidases: application of density functional theory to cytochrome ba3 of Thermus thermophilus.
Luna V Mitch; Chen Ying; Fee James A; Stout C David
Crystallographic studies of Xe and Kr binding within the large internal cavity of cytochrome ba3 from Thermus thermophilus: structural analysis and role of oxygen transport channels in the heme-Cu oxidases.

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All Publications

2009: Liu Bin; Chen Ying; Doukov Tzanko; Soltis S Michael; Stout C David; Fee James A
Combined microspectrophotometric and crystallographic examination of chemically reduced and X-ray radiation-reduced forms of cytochrome ba3 oxidase from Thermus thermophilus: structure of the reduced form of the enzyme.
Biochemistry 2009;48(5):820-6.
2008: Fee James A; Case David A; Noodleman Louis
Toward a chemical mechanism of proton pumping by the B-type cytochrome c oxidases: application of density functional theory to cytochrome ba3 of Thermus thermophilus.
Journal of the American Chemical Society 2008;130(45):15002-21.
2008: Luna V Mitch; Chen Ying; Fee James A; Stout C David
Crystallographic studies of Xe and Kr binding within the large internal cavity of cytochrome ba3 from Thermus thermophilus: structural analysis and role of oxygen transport channels in the heme-Cu oxidases.
Biochemistry 2008;47(16):4657-65.
2007: Liu Bin; Luna V Mitch; Chen Ying; Stout C David; Fee James A
An unexpected outcome of surface engineering an integral membrane protein: improved crystallization of cytochrome ba(3) from Thermus thermophilus.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 12):1029-34.
2007: Hayashi Takahiro; Lin I-Jin; Chen Ying; Fee James A; Moënne-Loccoz Pierre
Fourier transform infrared characterization of a CuB-nitrosyl complex in cytochrome ba3 from Thermus thermophilus: relevance to NO reductase activity in heme-copper terminal oxidases.
Journal of the American Chemical Society 2007;129(48):14952-8.
2006: Lin I-Jin; Chen Ying; Fee James A; Song Jikui; Westler William M; Markley John L
Rieske protein from Thermus thermophilus: 15N NMR titration study demonstrates the role of iron-ligated histidines in the pH dependence of the reduction potential.
Journal of the American Chemical Society 2006;128(33):10672-3.
2005: Chen Ying; Hunsicker-Wang Laura; Pacoma Ronald L; Luna Eugene; Fee James A
A homologous expression system for obtaining engineered cytochrome ba3 from Thermus thermophilus HB8.
Protein expression and purification 2005;40(2):299-318.
2005: Hunsicker-Wang Laura M; Pacoma Ronald L; Chen Ying; Fee James A; Stout C David
A novel cryoprotection scheme for enhancing the diffraction of crystals of recombinant cytochrome ba3 oxidase from Thermus thermophilus.
Acta crystallographica. Section D, Biological crystallography 2005;61(Pt 3):340-3.
2004: Fee James A; Todaro Thomas R; Luna Eugene; Sanders Donita; Hunsicker-Wang Laura M; Patel Kirti M; Bren Kara L; Gomez-Moran Ester; Hill Michael G; Ai Jingyuan; Loehr Thomas M; Oertling W Anthony; Williams Pamela A; Stout C David; McRee Duncan; Pastuszyn Andrzej
Cytochrome rC552, formed during expression of the truncated, Thermus thermophilus cytochrome c552 gene in the cytoplasm of Escherichia coli, reacts spontaneously to form protein-bound 2-formyl-4-vinyl (Spirographis) heme.
Biochemistry 2004;43(38):12162-76.
2003: Hunsicker-Wang Laura M; Heine Andreas; Chen Ying; Luna Eugene P; Todaro Thomas; Zhang Yan Ming; Williams Pamela A; McRee Duncan E; Hirst Judy; Stout C David; Fee James A
High-resolution structure of the soluble, respiratory-type Rieske protein from Thermus thermophilus: analysis and comparison.
Biochemistry 2003;42(24):7303-17.
2003: Fee James A; Castagnetto Jesus M; Case David A; Noodleman Louis; Stout C David; Torres Rhonda A
The circumsphere as a tool to assess distortion in [4Fe-4S] atom clusters.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2003;8(5):519-26.
2001: McRee D E; Williams P A; Sridhar V; Pastuszyn A; Bren K L; Patel K M; Chen Y; Todaro T R; Sanders D; Luna E; Fee J A
Recombinant cytochrome rC557 obtained from Escherichia coli cells expressing a truncated Thermus thermophilus cycA gene. Heme inversion in an improperly matured protein.
The Journal of biological chemistry 2001;276(9):6537-44.
2000: Fee J A; Chen Y; Todaro T R; Bren K L; Patel K M; Hill M G; Gomez-Moran E; Loehr T M; Ai J; Thöny-Meyer L; Williams P A; Stura E; Sridhar V; McRee D E
Integrity of thermus thermophilus cytochrome c552 synthesized by Escherichia coli cells expressing the host-specific cytochrome c maturation genes, ccmABCDEFGH: biochemical, spectral, and structural characterization of the recombinant protein.
Protein science : a publication of the Protein Society 2000;9(11):2074-84.
1999: Dunn C J; Rohlfs R J; Fee J A; Saltman P
Oxidation of deoxy myoglobin by [Fe(CN)6]3-.
Journal of inorganic biochemistry 1999;75(4):241-4.
1999: Williams P A; Blackburn N J; Sanders D; Bellamy H; Stura E A; Fee J A; McRee D E
The CuA domain of Thermus thermophilus ba3-type cytochrome c oxidase at 1.6 A resolution.
Nature structural biology 1999;6(6):509-16.
1999: Blackburn N J; Ralle M; Gomez E; Hill M G; Pastuszyn A; Sanders D; Fee J A
Selenomethionine-substituted Thermus thermophilus cytochrome ba3: characterization of the CuA site by Se and Cu K-EXAFS.
Biochemistry 1999;38(22):7075-84.
1998: Wittung-Stafshede P; Gomez E; Ohman A; Aasa R; Villahermosa R M; Leckner J; Karlsson B G; Sanders D; Fee J A; Winkler J R; Malmström B G; Gray H B; Hill M G
High-potential states of blue and purple copper proteins.
Biochimica et biophysica acta 1998;1388(2):437-43.
1998: Gatti D L; Tarr G; Fee J A; Ackerman S H
Cloning and sequence analysis of the structural gene for the bc1-type Rieske iron-sulfur protein from Thermus thermophilus HB8.
Journal of bioenergetics and biomembranes 1998;30(3):223-33.
1998: Keightley J A; Sanders D; Todaro T R; Pastuszyn A; Fee J A
Cloning and expression in Escherichia coli of the cytochrome c552 gene from Thermus thermophilus HB8. Evidence for genetic linkage to an ATP-binding cassette protein and initial characterization of the cycA gene products.
The Journal of biological chemistry 1998;273(20):12006-16.
1998: Wittung-Stafshede P; Malmstrom B G; Sanders D; Fee J A; Winkler J R; Gray H B
Effect of redox state on the folding free energy of a thermostable electron-transfer metalloprotein: the CuA domain of cytochrome oxidase from Thermus thermophilus.
Biochemistry 1998;37(9):3172-7.
1998: Kim Y; Babcock G T; Surerus K K; Fee J A; Dyer R B; Woodruff W H; Oertling W A
Cyanide binding and active site structure in heme-copper oxidases: normal coordinate analysis of iron-cyanide vibrations of a3(2+)CN- complexes of cytochromes ba3 and aa3.
Biospectroscopy 1998;4(1):1-15.
1996: Karpefors M; Slutter C E; Fee J A; Aasa R; Källebring B; Larsson S; Vänngård T
Electron paramagnetic resonance studies of the soluble CuA protein from the cytochrome ba3 of Thermus thermophilus.
Biophysical journal 1996;71(5):2823-9.
1996: Gurbiel R J; Doan P E; Gassner G T; Macke T J; Case D A; Ohnishi T; Fee J A; Ballou D P; Hoffman B M
Active site structure of Rieske-type proteins: electron nuclear double resonance studies of isotopically labeled phthalate dioxygenase from Pseudomonas cepacia and Rieske protein from Rhodobacter capsulatus and molecular modeling studies of a Rieske center.
Biochemistry 1996;35(24):7834-45.
1996: Slutter C E; Sanders D; Wittung P; Malmström B G; Aasa R; Richards J H; Gray H B; Fee J A
Water-soluble, recombinant CuA-domain of the cytochrome ba3 subunit II from Thermus thermophilus.
Biochemistry 1996;35(11):3387-95.
1995: Keightley J A; Zimmermann B H; Mather M W; Springer P; Pastuszyn A; Lawrence D M; Fee J A
Molecular genetic and protein chemical characterization of the cytochrome ba3 from Thermus thermophilus HB8.
The Journal of biological chemistry 1995;270(35):20345-58.
1995: Fee J A; Sanders D; Slutter C E; Doan P E; Aasa R; Karpefors M; Vänngård T
Multi-frequency EPR evidence for a binuclear CuA center in cytochrome c oxidase: studies with a 63Cu- and 65Cu-enriched, soluble domain of the cytochrome ba3 subunit II from Thermus thermophilus.
Biochemical and biophysical research communications 1995;212(1):77-83.
1994: Felsch J S; Horvath M P; Gursky S; Hobaugh M R; Goudreau P N; Fee J A; Morgan W T; Admiraal S J; Ikeda-Saito M; Fujiwara T
Probing protein-cofactor interactions in the terminal oxidases by second derivative spectroscopy: study of bacterial enzymes with cofactor substitutions and heme A model compounds.
Protein science : a publication of the Protein Society 1994;3(11):2097-103.
1994: Oertling W A; Surerus K K; Einarsdóttir O; Fee J A; Dyer R B; Woodruff W H
Spectroscopic characterization of cytochrome ba3, a terminal oxidase from Thermus thermophilus: comparison of the a3/CuB site to that of bovine cytochrome aa3.
Biochemistry 1994;33(10):3128-41.
1993: Adman E T; Mather M W; Fee J A
Molecular modeling studies on the proposed NaCl-induced dimerization of Chromatium vinosum high-potential iron protein.
Biochimica et biophysica acta 1993;1142(1-2):93-8.
1993: Fee J A; Yoshida T; Surerus K K; Mather M W
Cytochrome caa3 from the thermophilic bacterium Thermus thermophilus: a member of the heme-copper oxidase superfamily.
Journal of bioenergetics and biomembranes 1993;25(2):103-14.
1993: Mather M W; Springer P; Hensel S; Buse G; Fee J A
Cytochrome oxidase genes from Thermus thermophilus. Nucleotide sequence of the fused gene and analysis of the deduced primary structures for subunits I and III of cytochrome caa3.
The Journal of biological chemistry 1993;268(8):5395-408.
1993: Mather M W; Keightley J A; Fee J A
Recovery and cloning of genomic DNA fragments from dried agarose gels.
Methods in enzymology 1993;218():695-704.
1992: Kuila D; Schoonover J R; Dyer R B; Batie C J; Ballou D P; Fee J A; Woodruff W H
Resonance Raman studies of Rieske-type proteins.
Biochimica et biophysica acta 1992;1140(2):175-83.
1992: Goldbeck R A; Einarsdóttir O; Dawes T D; O'Connor D B; Surerus K K; Fee J A; Kliger D S
Magnetic circular dichroism study of cytochrome ba3 from Thermus thermophilus: spectral contributions from cytochromes b and a3 and nanosecond spectroscopy of CO photodissociation intermediates.
Biochemistry 1992;31(39):9376-87.
1992: Surerus K K; Oertling W A; Fan C; Gurbiel R J; Einarsdóttir O; Antholine W E; Dyer R B; Hoffman B M; Woodruff W H; Fee J A
Reaction of cyanide with cytochrome ba3 from Thermus thermophilus: spectroscopic characterization of the Fe(II)a3-CN.Cu(II)B-CN complex suggests four 14N atoms are coordinated to CuB.
Proceedings of the National Academy of Sciences of the United States of America 1992;89(8):3195-9.
1992: Mather M W; Fee J A
Development of plasmid cloning vectors for Thermus thermophilus HB8: expression of a heterologous, plasmid-borne kanamycin nucleotidyltransferase gene.
Applied and environmental microbiology 1992;58(1):421-5.
1991: Mather M W; Springer P; Fee J A
Cytochrome oxidase genes from Thermus thermophilus. Nucleotide sequence and analysis of the deduced primary structure of subunit IIc of cytochrome caa3.
The Journal of biological chemistry 1991;266(8):5025-35.
1990: Mather M W; Fee J A
Plasmid-associated aggregation in Thermus thermophilus HB8.
Plasmid 1990;24(1):45-56.
1989: Gurbiel R J; Batie C J; Sivaraja M; True A E; Fee J A; Hoffman B M; Ballou D P
Electron-nuclear double resonance spectroscopy of 15N-enriched phthalate dioxygenase from Pseudomonas cepacia proves that two histidines are coordinated to the [2Fe-2S] Rieske-type clusters.
Biochemistry 1989;28(11):4861-71.
1989: Buse G; Hensel S; Fee J A
Evidence for cytochrome oxidase subunit I and a cytochrome c--subunit II fused protein in the cytochrome 'c1aa3' of Thermus thermophilus. How old is cytochrome oxidase?
European journal of biochemistry / FEBS 1989;181(1):261-8.
1989: Einarsdóttir O; Killough P M; Fee J A; Woodruff W H
An infrared study of the binding and photodissociation of carbon monoxide in cytochrome ba3 from Thermus thermophilus.
The Journal of biological chemistry 1989;264(5):2405-8.
1988: Zimmermann B H; Nitsche C I; Fee J A; Rusnak F; Münck E
Properties of a copper-containing cytochrome ba3: a second terminal oxidase from the extreme thermophile Thermus thermophilus.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(16):5779-83.
1988: Fee J A; Mather M W; Springer P; Hensel S; Buse G
Isolation and partial sequence of the A-protein gene of Thermus thermophilus cytochrome c1aa3.
Annals of the New York Academy of Sciences 1988;550():33-8.
1987: Rusnak F M; Münck E; Nitsche C I; Zimmermann B H; Fee J A
Evidence for structural heterogeneities and a study of exchange coupling. Mössbauer studies of cytochrome c1aa3 from Thermus thermophilus.
The Journal of biological chemistry 1987;262(34):16328-32.
1987: Bertrand P; Gayda J P; Fee J A; Kuila D; Cammack R
Comparison of the spin-lattice relaxation properties of the two classes of [2Fe-2S] clusters in proteins.
Biochimica et biophysica acta 1987;916(1):24-8.
1986: Kuila D; Fee J A
Evidence for a redox-linked ionizable group associated with the [2Fe-2S] cluster of Thermus Rieske protein.
The Journal of biological chemistry 1986;261(6):2768-71.
1986: Fee J A; Kuila D; Mather M W; Yoshida T
Respiratory proteins from extremely thermophilic, aerobic bacteria.
Biochimica et biophysica acta 1986;853(2):153-85.

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