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Russell Finley

Research Profile

Procedures

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Genes, Insect

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Publications

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Dumrong Mairiang; Prida Malasit; Thilakam Murali; Ann Sodja; Prapat Suriyaphol; Huamei Zhang; Thawornchai Limjindaporn; Russell L Finley
Identification of new protein interactions between dengue fever virus and its hosts, human and mosquito.
Jingkai Yu; Thilakam Murali; Russell L Finley
Assigning confidence scores to protein-protein interactions.
George Roberts; Bernardo A Mangiola; Jodi R Parrish; Russell L Finley
High-throughput yeast two-hybrid screening.

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All Publications

2013: Dumrong Mairiang; Prida Malasit; Thilakam Murali; Ann Sodja; Prapat Suriyaphol; Huamei Zhang; Thawornchai Limjindaporn; Russell L Finley
Identification of new protein interactions between dengue fever virus and its hosts, human and mosquito.
PloS one 2013;8(1):e53535.
2012: Jingkai Yu; Thilakam Murali; Russell L Finley
Assigning confidence scores to protein-protein interactions.
Methods in molecular biology (Clifton, N.J.) 2012;812():161-74.
2012: George Roberts; Bernardo A Mangiola; Jodi R Parrish; Russell L Finley
High-throughput yeast two-hybrid screening.
Methods in molecular biology (Clifton, N.J.) 2012;812():39-61.
2011: Erica A Golemis; Ilya Serebriiskii; Mikhail G Kolonin; Jeno Gyuris; Russell L Finley; Roger Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.] 2011;Chapter 17():Unit 17.3..
2011: Vineshkumar Thidil Puliyappadamba; Anil Wali; Wenjuan Wu; Liyue Zhang; Debra Bevis; Russell L Finley; Robert Kilkuskie; Scott D Larsen; Edi Levi; Fred R Miller; Lisa Anne Polin ; Arun K Rishi
Antagonists of anaphase-promoting complex (APC)-2-cell cycle and apoptosis regulatory protein (CARP)-1 interaction are novel regulators of cell growth and apoptosis.
The Journal of biological chemistry 2011;286(44):38000-17.
2011: Erica A Golemis; Ilya G Serebriiskii; Russell L Finley; Mikhail G Kolonin; Jeno Gyuris; Roger Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in neuroscience / editorial board, Jacqueline N. Crawley ... [et al.] 2011;Chapter 4():Unit 4.4.
2011: Adam A Friedman; Pengyu Hong; Yanhui Hu; Thilakam Murali; Svetlana Pacifico; John M Asara; Bonnie Berger; Richard Binari; Russell L Finley; Maura Porto; Rohit Singh; Xiaoyun Sun; George Tucker; Arunachalam Vinayagam; Dong Yan; Norbert Perrimon
Proteomic and functional genomic landscape of receptor tyrosine kinase and ras to extracellular signal-regulated kinase signaling.
Science signaling 2011;4(196):rs10.
2011: Stephen T Guest; Julie A Hines; Maria A Kashat; Dongmei Liu; Jingkai Yu; Russell L Finley
A protein network-guided screen for cell cycle regulators in Drosophila.
BMC systems biology 2011;5():65.
2011: Thilakam Murali; Svetlana Pacifico; Jingkai Yu; Stephen Guest; George Roberts; Russell L Finley
DroID 2011: a comprehensive, integrated resource for protein, transcription factor, RNA and gene interactions for Drosophila.
Nucleic acids research 2011;39(Database issue):D736-43.
2010: Dongmei Liu; Stephen Guest; Russell L Finley
Why cyclin Y? A highly conserved cyclin with essential functions.
Fly 2010;4(4):278-82.
2010: David L Wilson; Vijay A K Rathinam; Weihong Qi; Lukas Wick; Jeff Landgraf; Julia A Bell; Anne Plovanich-Jones; Jodi Parrish; Russell L Finley; Linda S Mansfield; John E Linz
Genetic diversity in Campylobacter jejuni is associated with differential colonization of broiler chickens and C57BL/6J IL10-deficient mice.
Microbiology (Reading, England) 2010;156(Pt 7):2046-57.
2010: Shuliang Chen; Dongmei Liu; Russell L Finley; Miriam L. Greenberg
Loss of mitochondrial DNA in the yeast cardiolipin synthase crd1 mutant leads to up-regulation of the protein kinase Swe1p that regulates the G2/M transition.
The Journal of biological chemistry 2010;285(14):10397-407.
2010: Dongmei Liu; Russell L Finley
Cyclin Y is a novel conserved cyclin essential for development in Drosophila.
Genetics 2010;184(4):1025-35.
2009: Erica A Golemis; Ilya G Serebriiskii; Russell L Finley; Mikhail G Kolonin; Jeno Gyuris; Roger Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2009;Chapter 19():Unit19.2.
2009: Pablo Aguiar Prieto; Russell L Finley; P K Muchaal; Michele T Guerin; Sandy Isaacs; Arnaldo Castro Domínguez; Gisele Coutín Marie; Enrique Perez
Burden of self-reported acute gastrointestinal illness in Cuba.
Journal of health, population, and nutrition 2009;27(3):345-57.
2009: Ariel S Schwartz; Jingkai Yu; Kyle R Gardenour; Russell L Finley; Trey Ideker
Cost-effective strategies for completing the interactome.
Nature methods 2009;6(1):55-61.
2009: Jingkai Yu; Russell L Finley
Combining multiple positive training sets to generate confidence scores for protein-protein interactions.
Bioinformatics (Oxford, England) 2009;25(1):105-11.
2008: Erica A Golemis; Ilya G Serebriiskii; Russell L Finley; Mikhail G Kolonin; Jeno Gyuris; Roger Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] 2008;Chapter 20():Unit 20.1.
2008: Jingkai Yu; Svetlana Pacifico; Guozhen Liu; Russell L Finley
DroID: the Drosophila Interactions Database, a comprehensive resource for annotated gene and protein interactions.
BMC genomics 2008;9():461.
2007: Kourosh Jafari-Khouzani; Hamid Soltanian-Zadeh; Farshad Fotouhi; Jodi R Parrish; Russell L Finley
Automated segmentation and classification of high throughput yeast assay spots.
IEEE transactions on medical imaging 2007;26(10):1401-11.
2007: Seesandra V Rajagopala; Björn Titz; Johannes Goll; Jodi R Parrish; Katrin Wohlbold; Matthew T McKevitt; Timothy Palzkill; Hirotada Mori; Russell L Finley; Peter Uetz
The protein network of bacterial motility.
Molecular systems biology 2007;3():128.
2007: Jodi R Parrish; Jingkai Yu; Guozhen Liu; Julie A Hines; Jason E Chan; Bernie A Mangiola; Huamei Zhang; Svetlana Pacifico; Farshad Fotouhi; Victor J DiRita; Trey Ideker; Phillip Andrews; Russell L Finley
A proteome-wide protein interaction map for Campylobacter jejuni.
Genome biology 2007;8(7):R130.
2006: Jodi R Parrish; Keith D Gulyas; Russell L Finley
Yeast two-hybrid contributions to interactome mapping.
Current opinion in biotechnology 2006;17(4):387-93.
2006: Svetlana Pacifico; Guozhen Liu; Stephen Guest; Jodi R Parrish; Farshad Fotouhi; Russell L Finley
A database and tool, IM Browser, for exploring and integrating emerging gene and protein interaction data for Drosophila.
BMC bioinformatics 2006;7():195.
2005: Shuping Yin; Xiaohua Li; Yonghong Meng; Russell L Finley; Wael A Sakr; Heng Yang; Neelima Reddy; Shijie Sheng
Tumor-suppressive maspin regulates cell response to oxidative stress by direct interaction with glutathione S-transferase.
The Journal of biological chemistry 2005;280(41):34985-96.
2005: Peter Uetz; Russell L Finley
From protein networks to biological systems.
FEBS letters 2005;579(8):1821-7.
2004: Jodi R Parrish; Thawornchai Limjindaporn; Julie A Hines; Jiayou Liu; Guozhen Liu; Russell L Finley
High-throughput cloning of Campylobacter jejuni ORfs by in vivo recombination in Escherichia coli.
Journal of proteome research 2004;3(3):582-6.
2004: Clem Stanyon; Guozhen Liu; Bernardo A Mangiola; Nishi Patel; Loic Giot; Bing Kuang; Huamei Zhang; Jinhui Zhong; Russell L Finley
A Drosophila protein-interaction map centered on cell-cycle regulators.
Genome biology 2004;5(12):R96.
2003: Ognian C Ikonomov; Diego Sbrissa; Krzysztof Mlak; Robert Deeb; Jason Fligger; Aleric Soans; Russell L Finley; Assia Shisheva
Active PIKfyve associates with and promotes the membrane attachment of the late endosome-to-trans-Golgi network transport factor Rab9 effector p40.
The Journal of biological chemistry 2003;278(51):50863-71.
2003: L Giot; J S Bader; Cory Brouwer; A Chaudhuri; B Kuang; Y Li; Y L Hao; C E Ooi; B Godwin; E Vitols; G Vijayadamodar; P Pochart; H Machineni; M Welsh; Y Kong; B Zerhusen; R Malcolm; Z Varrone; A Collis; M Minto; S Burgess; L McDaniel; E Stimpson; F Spriggs; J Williams; K Neurath; N Ioime; M Agee; E Voss; K Furtak; R Renzulli; N Aanensen; S Carrolla; E Bickelhaupt; Y Lazovatsky; A DaSilva; J Zhong; Clem Stanyon; Russell L Finley; K P White; M Braverman; T Jarvie; S Gold; Martin Leach; J Knight; R A Shimkets; McKenna Michael; Chant John; J M Rothberg
A protein interaction map of Drosophila melanogaster.
Science (New York, N.Y.) 2003;302(5651):1727-36.
2003: Jinhui Zhong; Huamei Zhang; Clem Stanyon; Gerard Tromp; Russell L Finley
A strategy for constructing large protein interaction maps using the yeast two-hybrid system: regulated expression arrays and two-phase mating.
Genome research 2003;13(12):2691-9.
2003: Clem Stanyon; Thawornchai Limjindaporn; Russell L Finley
Simultaneous cloning of open reading frames into several different expression vectors.
BioTechniques 2003;35(3):520-2, 524-6.
2002: Jiayou Liu; Fayi Yao; Ruping Wu; Michael Morgan; Andrew Thorburn; Russell L Finley; Yong Q Chen
Mediation of the DCC apoptotic signal by DIP13 alpha.
The Journal of biological chemistry 2002;277(29):26281-5.
2002: Fei Yu; Russell L Finley; Avraham Raz; Hyeong-Reh Choi Kim
Galectin-3 translocates to the perinuclear membranes and inhibits cytochrome c release from the mitochondria. A role for synexin in galectin-3 translocation.
The Journal of biological chemistry 2002;277(18):15819-27.
2002: Russell L Finley; Huamei Zhang; Jinhui Zhong; Clem Stanyon
Regulated expression of proteins in yeast using the MAL61-62 promoter and a mating scheme to increase dynamic range.
Gene 2002;285(1-2):49-57.
2001: Erica A Golemis; Ilya G Serebriiskii; Russell L Finley; Mikhail G Kolonin; J Gyuris; Roger Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2001;Chapter 19():Unit19.2.
2001: Erica A Golemis; Ilya G Serebriiskii; Russell L Finley; MG Kolonin; J Gyuris; R Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.] 2001;Chapter 20():Unit 20.1.
2001: Erica A Golemis; Ilya G Serebriiskii; Russell L Finley; MG Kolonin; J Gyuris; R Brent
Interaction trap/two-hybrid system to identify interacting proteins.
Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.] 2001;Chapter 17():Unit 17.3.
2001: Ilya G Serebriiskii; Garabet G Toby; Russell L Finley; Erica A Golemis
Genomic analysis utilizing the yeast two-hybrid system.
Methods in molecular biology (Clifton, N.J.) 2001;175():415-54.
2000: MG Kolonin; Russell L Finley
A role for cyclin J in the rapid nuclear division cycles of early Drosophila embryogenesis.
Developmental biology 2000;227(2):661-72.
2000: Clem Stanyon; Russell L Finley
Progress and potential of Drosophila protein interaction maps.
Pharmacogenomics 2000;1(4):417-31.
2000: L Raj; P Vivekanand; T K Das; E Badam; M Fernandes; Russell L Finley; R Brent; L F Appel; Steven D Hanes; Michael Weir
Targeted localized degradation of Paired protein in Drosophila development.
Current biology : CB 2000;10(20):1265-72.
2000: Jianxin Mai; Russell L Finley; D M Waisman; Bonnie F Sloane
Human procathepsin B interacts with the annexin II tetramer on the surface of tumor cells.
The Journal of biological chemistry 2000;275(17):12806-12.
2000: Keqin Tang; Russell L Finley; Daotai Nie; Kenneth V Honn
Identification of 12-lipoxygenase interaction with cellular proteins by yeast two-hybrid screening.
Biochemistry 2000;39(12):3185-91.
2000: MG Kolonin; J Zhong; Russell L Finley
Interaction mating methods in two-hybrid systems.
Methods in enzymology 2000;328():26-46.
1998: MG Kolonin; Russell L Finley
Targeting cyclin-dependent kinases in Drosophila with peptide aptamers.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(24):14266-71.
1997: B J Thomas; KH Zavitz; Xinzhong Dong; Mary Ellen Lane; K Weigmann; Russell L Finley; R Brent; Christian F Lehner; S Lawrence Zipursky
roughex down-regulates G2 cyclins in G1.
Genes & development 1997;11(10):1289-98.
1997: Roger Brent; Russell L Finley
Understanding gene and allele function with two-hybrid methods.
Annual review of genetics 1997;31():663-704.
1996: Russell L Finley; B J Thomas; S Lawrence Zipursky; Roger Brent
Isolation of Drosophila cyclin D, a protein expressed in the morphogenetic furrow before entry into S phase.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(7):3011-5.
1994: Russell L Finley; Roger Brent
Interaction mating reveals binary and ternary connections between Drosophila cell cycle regulators.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(26):12980-4.
1994: Ze'ev Paroush; Russell L Finley; T Kidd; S M Wainwright; Philip Ingham; Roger Brent; David Ish-Horowicz
Groucho is required for Drosophila neurogenesis, segmentation, and sex determination and interacts directly with hairy-related bHLH proteins.
Cell 1994;79(5):805-15.
1990: Russell L Finley; S Chen; Jianfei Ma; P Byrne; R W West
Opposing regulatory functions of positive and negative elements in UASG control transcription of the yeast GAL genes.
Molecular and cellular biology 1990;10(11):5663-70.
1989: Russell L Finley; R W West
Differential repression of GAL4 and adjacent transcription activators by operators in the yeast GAL upstream activating sequence.
Molecular and cellular biology 1989;9(10):4282-90.