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Carol Friedman
This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers
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Network (preview)
25
Hripcsak, George
13
lussier, Yves
12
Liu, Hongfang
9
Johnson, Stephen
8
Rzhetsky, Andrey
8
Xu, Hua
8
Shagina, Lyudmila
8
Krauthammer, Michael
6
Kra, Pauline
6
Markatou, Marianthi
5
Tao, Ying
5
Fan, Jung-Wei
5
Yu, Hong
4
Hatzivassiloglou, Vasileios
4
Mendonça, Eneida
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All Publications
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2009: Wang Xiaoyan; Hripcsak George; Markatou Marianthi; Friedman Carol
Active computerized pharmacovigilance using natural language processing, statistics, and electronic health records: a feasibility study.
Journal of the American Medical Informatics Association : JAMIA 2009;16(3):328-37.
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2009: Wang Xiaoyan; Hripcsak George; Friedman Carol
Characterizing environmental and phenotypic associations using information theory and electronic health records.
BMC bioinformatics 2009;10 Suppl 9():S13.
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2009: Sam Lee T; Mendonça Eneida A; Li Jianrong; Blake Judith; Friedman Carol; Lussier Yves A
PhenoGO: an integrated resource for the multiscale mining of clinical and biological data.
BMC bioinformatics 2009;10 Suppl 2():S8.
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2008: Fan Jung-Wei; Friedman Carol
Semantic reclassification of the UMLS concepts.
Bioinformatics (Oxford, England) 2008;24(17):1971-3.
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2008: Chen Elizabeth S; Hripcsak George; Xu Hua; Markatou Marianthi; Friedman Carol
Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study.
Journal of the American Medical Informatics Association : JAMIA 2008;15(1):87-98.
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2008: Li Li; Chase Herbert S; Patel Chintan O; Friedman Carol; Weng Chunhua
Comparing ICD9-encoded diagnoses and NLP-processed discharge summaries for clinical trials pre-screening: a case study.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2008;():404-8.
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2008: Wang Xiaoyan; Chused Amy; Elhadad Noémie; Friedman Carol; Markatou Marianthi
Automated knowledge acquisition from clinical narrative reports.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2008;():783-7.
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2008: Xu Hua; Stetson Peter D; Friedman Carol
Methods for building sense inventories of abbreviations in clinical notes.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2008;():819.
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2007: Tao Ying; Sam Lee; Li Jianrong; Friedman Carol; Lussier Yves A
Information theory applied to the sparse gene ontology annotation network to predict novel gene function.
Bioinformatics (Oxford, England) 2007;23(13):i529-38.
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2007: Fan Jung-Wei; Friedman Carol
Semantic classification of biomedical concepts using distributional similarity.
Journal of the American Medical Informatics Association : JAMIA 2007;14(4):467-77.
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2007: Tulipano P Karina; Tao Ying; Millar William S; Zanzonico Pat; Kolbert Katherine; Xu Hua; Yu Hong; Chen Lifeng; Lussier Yves A; Friedman Carol
Natural language processing and visualization in the molecular imaging domain.
Journal of biomedical informatics 2007;40(3):270-81.
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2007: Xu Hua; Fan Jung-Wei; Hripcsak George; Mendonça Eneida A; Markatou Marianthi; Friedman Carol
Gene symbol disambiguation using knowledge-based profiles.
Bioinformatics (Oxford, England) 2007;23(8):1015-22.
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2007: Chen Elizabeth S; Stetson Peter D; Lussier Yves A; Markatou Marianthi; Hripcsak George; Friedman Carol
Detection of practice pattern trends through Natural Language Processing of clinical narratives and biomedical literature.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2007;():120-4.
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2007: Sam Lee; Liu Yang; Li Jianrong; Friedman Carol; Lussier Yves A
Discovery of protein interaction networks shared by diseases.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2007;():76-87.
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2007: Fan Jung-Wei; Xu Hua; Friedman Carol
Using distributional analysis to semantically classify UMLS concepts.
Studies in health technology and informatics 2007;129(Pt 1):519-23.
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2007: Fan Jung-Wei; Xu Hua; Friedman Carol
Using contextual and lexical features to restructure and validate the classification of biomedical concepts.
BMC bioinformatics 2007;8():264.
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2006: Zhou Li; Tao Ying; Cimino James J; Chen Elizabeth S; Liu Hongfang; Lussier Yves A; Hripcsak George; Friedman Carol
Terminology model discovery using natural language processing and visualization techniques.
Journal of biomedical informatics 2006;39(6):626-36.
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2006: Friedman Carol; Borlawsky Tara; Shagina Lyudmila; Xing H Rosie; Lussier Yves A
Bio-Ontology and text: bridging the modeling gap.
Bioinformatics (Oxford, England) 2006;22(19):2421-9.
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2006: Kukafka Rita; Bales Michael E; Burkhardt Ann; Friedman Carol
Human and automated coding of rehabilitation discharge summaries according to the International Classification of Functioning, Disability, and Health.
Journal of the American Medical Informatics Association : JAMIA 2006;13(5):508-15.
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2006: Bales Michael E; Kukafka Rita; Burkhardt Ann; Friedman Carol
Qualitative assessment of the International Classification of Functioning, Disability, and Health with respect to the desiderata for controlled medical vocabularies.
International journal of medical informatics 2006;75(5):384-95.
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2006: Xu Hua; Krupke Debra; Blake Judith; Friedman Carol
A natural language processing (NLP) tool to assist in the curation of the laboratory Mouse Tumor Biology Database.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2006;():1150.
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2006: Silfen Eric Z; Patel Chintan; Mendonça Eneida; Friedman Carol
ZebraHunter: searching rare medical diagnoses and retrieving relevant citations.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2006;():1094.
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2006: Chen Elizabeth S; Hripcsak George; Friedman Carol
Disseminating natural language processed clinical narratives.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2006;():126-30.
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2006: Borlawsky Tara; Friedman Carol; Lussier Yves A
Generating executable knowledge for evidence-based medicine using natural language and semantic processing.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2006;():56-60.
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2006: Lussier Yves; Borlawsky Tara; Rappaport Daniel; Liu Yang; Friedman Carol
PhenoGO: assigning phenotypic context to gene ontology annotations with natural language processing.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2006;():64-75.
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2006: Xu Hua; Markatou Marianthi; Dimova Rositsa; Liu Hongfang; Friedman Carol
Machine learning and word sense disambiguation in the biomedical domain: design and evaluation issues.
BMC bioinformatics 2006;7():334.
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2005: Haas Janet P; Mendonça Eneida A; Ross Barbara; Friedman Carol; Larson Elaine
Use of computerized surveillance to detect nosocomial pneumonia in neonatal intensive care unit patients.
American journal of infection control 2005;33(8):439-43.
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2005: Mendonça Eneida A; Haas Janet; Shagina Lyudmila; Larson Elaine; Friedman Carol
Extracting information on pneumonia in infants using natural language processing of radiology reports.
Journal of biomedical informatics 2005;38(4):314-21.
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2005: Bakken Suzanne; Hyun Sookyung; Friedman Carol; Johnson Stephen B
ISO reference terminology models for nursing: applicability for natural language processing of nursing narratives.
International journal of medical informatics 2005;74(7-8):615-22.
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2005: Tao Ying; Friedman Carol; Lussier Yves A
Visualizing information across multidimensional post-genomic structured and textual databases.
Bioinformatics (Oxford, England) 2005;21(8):1659-67.
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2005: Tulipano P Karina; Tao Ying; Zanzonico Pat; Kolbert Katherine; Lussier Yves; Friedman Carol
Natural language processing in the molecular imaging domain.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2005;():1143.
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2005: Bales Michael; Kukafka Rita; Burkhardt Ann; Friedman Carol
Extending a medical language processing system to the functional status domain.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2005;():888.
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2005: Zhou Li; Friedman Carol; Parsons Simon; Hripcsak George
System architecture for temporal information extraction, representation and reasoning in clinical narrative reports.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2005;():869-73.
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2004: Friedman Carol; Shagina Lyudmila; Lussier Yves; Hripcsak George
Automated encoding of clinical documents based on natural language processing.
Journal of the American Medical Informatics Association : JAMIA 2004;11(5):392-402.
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2004: Iossifov Ivan; Krauthammer Michael; Friedman Carol; Hatzivassiloglou Vasileios; Bader Joel S; White Kevin P; Rzhetsky Andrey
Probabilistic inference of molecular networks from noisy data sources.
Bioinformatics (Oxford, England) 2004;20(8):1205-13.
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2004: Rzhetsky Andrey; Iossifov Ivan; Koike Tomohiro; Krauthammer Michael; Kra Pauline; Morris Mitzi; Yu Hong; Duboué Pablo Ariel; Weng Wubin; Wilbur W John; Hatzivassiloglou Vasileios; Friedman Carol
GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data.
Journal of biomedical informatics 2004;37(1):43-53.
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2004: Xu Hua; Anderson Kristin; Grann Victor R; Friedman Carol
Facilitating cancer research using natural language processing of pathology reports.
Studies in health technology and informatics 2004;107(Pt 1):565-72.
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2004: Bakken Suzanne; Hyun Sookyung; Friedman Carol; Johnson Stephen
A comparison of semantic categories of the ISO reference terminology models for nursing and the MedLEE natural language processing system.
Studies in health technology and informatics 2004;107(Pt 1):472-6.
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2004: Tuason O; Chen L; Liu H; Blake J A; Friedman C
Biological nomenclatures: a source of lexical knowledge and ambiguity.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2004;():238-49.
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2003: Friedman Carol; Liu Hongfang; Shagina Lyudmila
A vocabulary development and visualization tool based on natural language processing and the mining of textual patient reports.
Journal of biomedical informatics 2003;36(3):189-201.
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2003: Xu Hua; Friedman Carol
Facilitating research in pathology using natural language processing.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2003;():1057.
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2003: Johnson Stephen B; Campbell David A; Krauthammer Michael; Tulipano P Karina; Medonca Eneida A; Friedman Carol; Hripcsak George
A native XML database design for clinical document research.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2003;():883.
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2003: Hyun Sookyung; Bakken Suzanne; Friedman Carol; Johnson Stephen B
Natural language processing challenges in HIV/AIDS clinic notes.
AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium 2003;():872.
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2003: Liu Hongfang; Friedman Carol
Mining terminological knowledge in large biomedical corpora.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2003;():415-26.
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2002: Liu Hongfang; Johnson Stephen B; Friedman Carol
Automatic resolution of ambiguous terms based on machine learning and conceptual relations in the UMLS.
Journal of the American Medical Informatics Association : JAMIA 2002;9(6):621-36.
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2002: Friedman Carol; Kra Pauline; Rzhetsky Andrey
Two biomedical sublanguages: a description based on the theories of Zellig Harris.
Journal of biomedical informatics 2002;35(4):222-35.
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2002: Hripcsak George; Austin John H M; Alderson Philip O; Friedman Carol
Use of natural language processing to translate clinical information from a database of 889,921 chest radiographic reports.
Radiology 2002;224(1):157-63.
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2002: Yu Hong; Hripcsak George; Friedman Carol
Mapping abbreviations to full forms in biomedical articles.
Journal of the American Medical Informatics Association : JAMIA 2002;9(3):262-72.
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2002: Yu Hong; Hatzivassiloglou Vasileios; Friedman Carol; Rzhetsky Andrey; Wilbur W John
Automatic extraction of gene and protein synonyms from MEDLINE and journal articles.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2002;():919-23.
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2002: Liu Hongfang; Aronson Alan R; Friedman Carol
A study of abbreviations in MEDLINE abstracts.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2002;():464-8.
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2002: Krauthammer Michael; Johnson Stephen B; Hripcsak George; Campbell David A; Friedman Carol
Representing nested semantic information in a linear string of text using XML.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2002;():405-9.
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2002: Chuang Jen-Hsiang; Friedman Carol; Hripcsak George
A comparison of the Charlson comorbidities derived from medical language processing and administrative data.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2002;():160-4.
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2002: Krauthammer Michael; Kra Pauline; Iossifov Ivan; Gomez Shawn M; Hripcsak George; Hatzivassiloglou Vasileios; Friedman Carol; Rzhetsky Andrey
Of truth and pathways: chasing bits of information through myriads of articles.
Bioinformatics (Oxford, England) 2002;18 Suppl 1():S249-57.
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2001: Liu H; Lussier Y A; Friedman C
Disambiguating ambiguous biomedical terms in biomedical narrative text: an unsupervised method.
Journal of biomedical informatics 2001;34(4):249-61.
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2001: Lussier Y A; Shagina L; Friedman C
Automating SNOMED coding using medical language understanding: a feasibility study.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2001;():418-22.
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2001: Liu H; Lussier Y A; Friedman C
A study of abbreviations in the UMLS.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2001;():393-7.
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2001: Friedman C; Liu H; Shagina L; Johnson S; Hripcsak G
Evaluating the UMLS as a source of lexical knowledge for medical language processing.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2001;():189-93.
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2001: Friedman C; Kra P; Yu H; Krauthammer M; Rzhetsky A
GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles.
Bioinformatics (Oxford, England) 2001;17 Suppl 1():S74-82.
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2000: Krauthammer M; Rzhetsky A; Morozov P; Friedman C
Using BLAST for identifying gene and protein names in journal articles.
Gene 2000;259(1-2):245-52.
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2000: Rzhetsky A; Koike T; Kalachikov S; Gomez S M; Krauthammer M; Kaplan S H; Kra P; Russo J J; Friedman C
A knowledge model for analysis and simulation of regulatory networks.
Bioinformatics (Oxford, England) 2000;16(12):1120-8.
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2000: Liu H; Friedman C
A method for vocabulary development and visualization based on medical language processing and XML.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2000;():502-6.
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2000: Friedman C
A broad-coverage natural language processing system.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2000;():270-4.
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2000: Barrows Jr R C; Busuioc M; Friedman C
Limited parsing of notational text visit notes: ad-hoc vs. NLP approaches.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 2000;():51-5.
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1999: Friedman C; Hripcsak G
Natural language processing and its future in medicine.
Academic medicine : journal of the Association of American Medical Colleges 1999;74(8):890-5.
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1999: Hripcsak G; Kuperman G J; Friedman C; Heitjan D F
A reliability study for evaluating information extraction from radiology reports.
Journal of the American Medical Informatics Association : JAMIA 1999;6(2):143-50.
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1999: Friedman C; Hripcsak G; Shagina L; Liu H
Representing information in patient reports using natural language processing and the extensible markup language.
Journal of the American Medical Informatics Association : JAMIA 1999;6(1):76-87.
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1999: Shablinsky I; Starren J; Friedman C
What do ER physicians really want? A method for elucidating ER information needs.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 1999;():390-4.
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1999: Friedman C; Knirsch C; Shagina L; Hripcsak G
Automating a severity score guideline for community-acquired pneumonia employing medical language processing of discharge summaries.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 1999;():256-60.
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1999: Yu H; Friedman C; Rhzetsky A; Kra P
Representing genomic knowledge in the UMLS semantic network.
Proceedings / AMIA ... Annual Symposium. AMIA Symposium 1999;():181-5.
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1998: Friedman C; Hripcsak G
Evaluating natural language processors in the clinical domain.
Methods of information in medicine 1998;37(4-5):334-44.
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1998: Knirsch C A; Jain N L; Pablos-Mendez A; Friedman C; Hripcsak G
Respiratory isolation of tuberculosis patients using clinical guidelines and an automated clinical decision support system.
Infection control and hospital epidemiology : the official journal of the Society of Hospital Epidemiologists of America 1998;19(2):94-100.
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1998: Hripcsak G; Kuperman G J; Friedman C
Extracting findings from narrative reports: software transferability and sources of physician disagreement.
Methods of information in medicine 1998;37(1):1-7.
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1997: Jain N L; Friedman C
Identification of findings suspicious for breast cancer based on natural language processing of mammogram reports.
Proceedings : a conference of the American Medical Informatics Association / ... AMIA Annual Fall Symposium. AMIA Fall Symposium 1997;():829-33.
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1997: Friedman C
Towards a comprehensive medical language processing system: methods and issues.
Proceedings : a conference of the American Medical Informatics Association / ... AMIA Annual Fall Symposium. AMIA Fall Symposium 1997;():595-9.
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1996: Jain N L; Knirsch C A; Friedman C; Hripcsak G
Identification of suspected tuberculosis patients based on natural language processing of chest radiograph reports.
Proceedings : a conference of the American Medical Informatics Association / ... AMIA Annual Fall Symposium. AMIA Fall Symposium 1996;():542-6.
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1996: Johnson S B; Friedman C
Integrating data from natural language processing into a clinical information system.
Proceedings : a conference of the American Medical Informatics Association / ... AMIA Annual Fall Symposium. AMIA Fall Symposium 1996;():537-41.
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1995: Hripcsak G; Friedman C; Alderson P O; DuMouchel W; Johnson S B; Clayton P D
Unlocking clinical data from narrative reports: a study of natural language processing.
Annals of internal medicine 1995;122(9):681-8.
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1995: Friedman C; Johnson S B; Forman B; Starren J
Architectural requirements for a multipurpose natural language processor in the clinical environment.
Proceedings / the ... Annual Symposium on Computer Application [sic] in Medical Care. Symposium on Computer Applications in Medical Care 1995;():347-51.
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1994: Friedman C; Alderson P O; Austin J H; Cimino J J; Johnson S B
A general natural-language text processor for clinical radiology.
Journal of the American Medical Informatics Association : JAMIA 1994;1(2):161-74.
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