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Agostinho Antunes

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Publications

TOP 3
Cristiana Moreira; Vitor Vasconcelos; Agostinho Antunes
Phylogeny of microcystins: evidence of a biogeographical trend?
Susana R Pereira; Vítor M Vasconcelos; Agostinho Antunes
Computational study of the covalent bonding of microcystins to cysteine residues--a reaction involved in the inhibition of the PPP family of protein phosphatases.
Siby Philip; Vítor Vasconcelos; Warren E Johnson; João Paulo Machado; Emanuel Maldonado; Stephen J O'Brien; Agostinho Antunes
Fish lateral line innovation: insights into the evolutionary genomic dynamics of a unique mechanosensory organ.

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All Publications

2013: Cristiana Moreira; Vitor Vasconcelos; Agostinho Antunes
Phylogeny of microcystins: evidence of a biogeographical trend?
Current microbiology 2013;66(3):214-21.
2013: Susana R Pereira; Vítor M Vasconcelos; Agostinho Antunes
Computational study of the covalent bonding of microcystins to cysteine residues--a reaction involved in the inhibition of the PPP family of protein phosphatases.
The FEBS journal 2013;280(2):674-80.
2012: Siby Philip; Vítor Vasconcelos; Warren E Johnson; João Paulo Machado; Emanuel Maldonado; Stephen J O'Brien; Agostinho Antunes
Fish lateral line innovation: insights into the evolutionary genomic dynamics of a unique mechanosensory organ.
Molecular biology and evolution 2012;29(12):3887-98.
2012: Bárbara Frazão; Vitor Vasconcelos; Agostinho Antunes
Sea anemone (Cnidaria, Anthozoa, Actiniaria) toxins: an overview.
Marine drugs 2012;10(8):1812-51.
2012: Kartik Sunagar; Vítor Vasconcelos; Warren E Johnson; Stephen J O'Brien; Agostinho Antunes
Evolution of CRISPs associated with toxicoferan-reptilian venom and mammalian reproduction.
Molecular biology and evolution 2012;29(7):1807-22.
2012: Pedro N Leão; Agostinho Antunes; Niclas Engene; William H Gerwick; Vitor Vasconcelos
The chemical ecology of cyanobacteria.
Natural product reports 2012;29(3):372-91.
2012: Stephen J O'Brien; Agostinho Antunes; Meredith A Brown; Warren E Johnson; Melody E Roelke-Parker; Jennifer L Troyer; Jill Pecon-Slattery
Emerging viruses in the Felidae: shifting paradigms.
Viruses 2012;4(2):236-57.
2012: Siby Philip; Maria Armanda Reis-Henriques; Miguel M Santos; Vítor Vasconcelos; L Filipe C Castro; Rute R da Fonseca; Agostinho Antunes
Adaptive evolution of the Retinoid X receptor in vertebrates.
Genomics 2012;99(2):81-9.
2012: Rui Borges; Warren E Johnson; Stephen J O'Brien; Vitor Vasconcelos; Agostinho Antunes
The role of gene duplication and unconstrained selective pressures in the melanopsin gene family evolution and vertebrate circadian rhythm regulation.
PloS one 2012;7(12):e52413.
2012: Anoop Alex; Arlete Santos; Paula Tamagnini; Vitor Vasconcelos; Agostinho Antunes
Unusual symbiotic cyanobacteria association in the genetically diverse intertidal marine sponge Hymeniacidon perlevis (Demospongiae, Halichondrida).
PloS one 2012;7(12):e51834.
2011: Cristiana Moreira; Ana Regueiras; Micaela Vale; Agostinho Antunes; Joana Azevedo; Marisa Freitas; António Martins; Vitor Vasconcelos
Application of real-time PCR in the assessment of the toxic cyanobacterium Cylindrospermopsis raciborskii abundance and toxicological potential.
Applied microbiology and biotechnology 2011;92(1):189-97.
2011: Emanuel Maldonado; Julien Y Dutheil; Rute R da Fonseca; Vitor Vasconcelos; Agostinho Antunes
IMPACT: integrated multiprogram platform for analyses in ConTest.
The Journal of heredity 2011;102(3):366-9.
2011: Cristiana Moreira; Afef Fathalli; Vitor Vasconcelos; Agostinho Antunes
Genetic diversity and structure of the invasive toxic cyanobacterium Cylindrospermopsis raciborskii.
Current microbiology 2011;62(5):1590-5.
2011: Guillermin Agüero-Chapin; Gustavo A de la Riva; Reinaldo Molina-Ruiz; Aminael Sánchez-Rodríguez; Gisselle Pérez-Machado; Vítor Vasconcelos; Agostinho Antunes
Non-linear models based on simple topological indices to identify RNase III protein members.
Journal of theoretical biology 2011;273(1):167-78.
2011: Susana R Pereira; Vítor M Vasconcelos; Agostinho Antunes
The phosphoprotein phosphatase family of Ser/Thr phosphatases as principal targets of naturally occurring toxins.
Critical reviews in toxicology 2011;41(2):83-110.
2011: Guillermín Agüero-Chapin; Gisselle Pérez-Machado; Reinaldo Molina-Ruiz; Yunierkis Pérez-Castillo; Aliuska Morales-Helguera; Vítor Vasconcelos; Agostinho Antunes
TI2BioP: Topological Indices to BioPolymers. Its practical use to unravel cryptic bacteriocin-like domains.
Amino acids 2011;40(2):431-42.
2011: António Martins; Cristiana Moreira; Ana Regueiras; Micaela Vale; Agostinho Antunes; Marisa Freitas; Vitor Vasconcelos
Seasonal dynamics of Microcystis spp. and their toxigenicity as assessed by qPCR in a temperate reservoir.
Marine drugs 2011;9(10):1715-30.
2011: Guillermín Agüero-Chapin; Pedro I Hidalgo-Yanes; Kathleen Marchal; Reinaldo Molina-Ruiz; Yunierkis Pérez-Castillo; Aminael Sánchez-Rodríguez; Vítor Vasconcelos; Agostinho Antunes
An alignment-free approach for eukaryotic ITS2 annotation and phylogenetic inference.
PloS one 2011;6(10):e26638.
2010: Vitor Vasconcelos; António Martins; Micaela Vale; Agostinho Antunes; Joana Azevedo; Martin Welker; Oscar Lopez; Gustavo Montejano
First report on the occurrence of microcystins in planktonic cyanobacteria from Central Mexico.
Toxicon : official journal of the International Society on Toxinology 2010;56(3):425-31.
2010: Rute R da Fonseca; Warren E Johnson; Stephen J O'Brien; Vitor Vasconcelos; Agostinho Antunes
Molecular evolution and the role of oxidative stress in the expansion and functional diversification of cytosolic glutathione transferases.
BMC evolutionary biology 2010;10():281.
2010: Viviana Lopes; Agostinho Antunes; Martin Welker; Rosário F Martins; Vitor Vasconcelos
Morphological, toxicological and molecular characterization of a benthic Nodularia isolated from Atlantic estuarine environments.
Research in microbiology 2010;161(1):9-17.
2008: Agostinho Antunes; Jennifer L Troyer; Melody E Roelke-Parker; Jill Pecon-Slattery; Craig Packer; Christiaan Winterbach; Hanlie Winterbach; Graham Hemson; Laurence Frank; Philip Stander; Ludwig Siefert; Margaret Driciru; Paul J Funston; Kathy A Alexander; Katherine C Prager; Gus Mills; David Wildt; R BUSH; Stephen J O'Brien; Warren E Johnson
The evolutionary dynamics of the lion Panthera leo revealed by host and viral population genomics.
PLoS genetics 2008;4(11):e1000251.
2008: Jennifer L Troyer; Sue Vandewoude; Jill Pecon-Slattery; Carl McIntosh; Sam Franklin; Agostinho Antunes; Warren Johnson; Stephen J O'Brien
FIV cross-species transmission: an evolutionary prospective.
Veterinary immunology and immunopathology 2008;123(1-2):159-66.
2008: Shu-Jin Luo; Warren E Johnson; Janice Martenson; Agostinho Antunes; Paolo Martelli; Olga Uphyrkina; Kathy Traylor-Holzer; James L D Smith; Stephen J O'Brien
Subspecies genetic assignments of worldwide captive tigers increase conservation value of captive populations.
Current biology : CB 2008;18(8):592-6.
2008: Rute R da Fonseca; Warren E Johnson; Stephen J O'Brien; Maria João Ramos; Agostinho Antunes
The adaptive evolution of the mammalian mitochondrial genome.
BMC genomics 2008;9():119.
2007: Joan U Pontius; James C Mullikin; Douglas R Smith; Kerstin Lindblad-Toh; Sante Gnerre; Michele Clamp; Jean Chang; Robert Stephens; Beena Neelam; Natalia Volfovsky; Alejandro A Schäffer; Richa Agarwala; Kristina Narfström; William J Murphy; Urs Giger; Alfred L Roca; Agostinho Antunes; Marilyn Menotti-Raymond; Naoya Yuhki; Jill Pecon-Slattery; Warren E Johnson; Guillaume Bourque; Glenn Tesler; Stephen J O'Brien
Initial sequence and comparative analysis of the cat genome.
Genome research 2007;17(11):1675-89.
2007: Rute da Fonseca; Agostinho Antunes; André Melo; Maria João Ramos
Structural divergence and adaptive evolution in mammalian cytochromes P450 2C.
Gene 2007;387(1-2):58-66.
2007: Agostinho Antunes; Maria João Ramos
Gathering computational genomics and proteomics to unravel adaptive evolution.
Evolutionary bioinformatics online 2007;3():207-9.
2007: Daniel Sampaio Osorio; Agostinho Antunes; Maria João Ramos
Structural and functional implications of positive selection at the primate angiogenin gene.
BMC evolutionary biology 2007;7():167.
2007: Agostinho Antunes; Joan U Pontius; Maria João Ramos; Stephen J O'Brien; Warren E Johnson
Mitochondrial introgressions into the nuclear genome of the domestic cat.
The Journal of heredity 2007;98(5):414-20.
2006: Agostinho Antunes; Rui Faria; Warren E Johnson; René Guyomard; Paulo Alexandrino
Life on the edge: the long-term persistence and contrasting spatial genetic structure of distinct brown trout life histories at their ecological limits.
The Journal of heredity 2006;97(3):193-205.
2006: Jae-Heup Kim; Agostinho Antunes; Shu-Jin Luo; Joan C Menninger; William G Nash; Stephen J O'Brien; Warren E Johnson
Evolutionary analysis of a large mtDNA translocation (numt) into the nuclear genome of the Panthera genus species.
Gene 2006;366(2):292-302.
2006: Warren E Johnson; Eduardo Eizirik; Jill Pecon-Slattery; William J Murphy; Agostinho Antunes; Emma C Teeling; Stephen J O'Brien
The late Miocene radiation of modern Felidae: a genetic assessment.
Science (New York, N.Y.) 2006;311(5757):73-7.
2006: Alexandra T Marques; Agostinho Antunes; Pedro Alexandrino Fernandes; Maria João Ramos
Comparative evolutionary genomics of the HADH2 gene encoding Abeta-binding alcohol dehydrogenase/17beta-hydroxysteroid dehydrogenase type 10 (ABAD/HSD10).
BMC genomics 2006;7():202.
2005: Agostinho Antunes; Maria João Ramos
Discovery of a large number of previously unrecognized mitochondrial pseudogenes in fish genomes.
Genomics 2005;86(6):708-17.
2002: Agostinho Antunes; Alan R Templeton; René Guyomard; Paulo Alexandrino
The role of nuclear genes in intraspecific evolutionary inference: genealogy of the transferrin gene in the brown trout.
Molecular biology and evolution 2002;19(8):1272-87.
2000: Agostinho Antunes; Nuno Ferrand; Paulo Alexandrino
A highly polymorphic plasma protein locus in brown trout (Salmo trutta L.) populations from Portugal.
Biochemical genetics 2000;38(7-8):217-26.
2000: S Weiss; Agostinho Antunes; C Schlötterer; Paulo Alexandrino
Mitochondrial haplotype diversity among Portuguese brown trout Salmo trutta L. populations: relevance to the post-pleistocene recolonization of northern Europe.
Molecular ecology 2000;9(6):691-8.