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Clelia Ganoza

Research Profile

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Escherichia coli

Anatomy

Ribosomes

Physiology

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Protein Binding

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Publications

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Jong-Hwan Park; Hiroyuki Aoki; M Clelia Ganoza; Bill X Huang; Hans E Johansson; Hee-Yong Kim; Myung Hee Park
Post-translational modification by β-lysylation is required for activity of Escherichia coli elongation factor P (EF-P).
Mohan Babu; Hiroyuki Aoki; Wasimul Q Chowdhury; Alla Gagarinova; Chris Graham; Sadhna Phanse; Ben Laliberte; Noor Sunba; Matthew Jessulat; Ashkan Golshani; Andrew Emili; Jack Greenblatt; M Clelia Ganoza
Ribosome-dependent ATPase interacts with conserved membrane protein in Escherichia coli to modulate protein synthesis and oxidative phosphorylation.
Matthew Jessulat; Terry Buist; Md Alamgir; Mohsen Hooshyar; Jianhua Xu; Hiroyuki Aoki; M Clelia Ganoza; Gareth Butland; Ashkan Golshani
In vivo investigation of protein-protein interactions for helicases using tandem affinity purification.

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All Publications

2012: Jong-Hwan Park; Hiroyuki Aoki; M Clelia Ganoza; Bill X Huang; Hans E Johansson; Hee-Yong Kim; Myung Hee Park
Post-translational modification by β-lysylation is required for activity of Escherichia coli elongation factor P (EF-P).
The Journal of biological chemistry 2012;287(4):2579-90.
2011: Mohan Babu; Hiroyuki Aoki; Wasimul Q Chowdhury; Alla Gagarinova; Chris Graham; Sadhna Phanse; Ben Laliberte; Noor Sunba; Matthew Jessulat; Ashkan Golshani; Andrew Emili; Jack Greenblatt; M Clelia Ganoza
Ribosome-dependent ATPase interacts with conserved membrane protein in Escherichia coli to modulate protein synthesis and oxidative phosphorylation.
PloS one 2011;6(4):e18510.
2010: Matthew Jessulat; Terry Buist; Md Alamgir; Mohsen Hooshyar; Jianhua Xu; Hiroyuki Aoki; M Clelia Ganoza; Gareth Butland; Ashkan Golshani
In vivo investigation of protein-protein interactions for helicases using tandem affinity purification.
Methods in molecular biology (Clifton, N.J.) 2010;587():99-111.
2008: Hiroyuki Aoki; John Xu; Andrew Emili; John Chosay; Ashkan Golshani; M Clelia Ganoza
Interactions of elongation factor EF-P with the Escherichia coli ribosome.
The FEBS journal 2008;275(4):671-81.
2007: Gareth Butland; Nevan J Krogan; Jianhua Xu; Wen-Hong Yang; Hiroyuki Aoki; Joyce S Li; Naden Krogan; Javier Menendez; Gerard Cagney; Gholam C Kiani; Matthew Jessulat; Nira Datta; Ivan Ivanov; Mounir G Abouhaidar; Andrew Emili; Jack Greenblatt; M Clelia Ganoza; Ashkan Golshani
Investigating the in vivo activity of the DeaD protein using protein-protein interactions and the translational activity of structured chloramphenicol acetyltransferase mRNAs.
Journal of cellular biochemistry 2007;100(3):642-52.
2006: John Xu; Michael C Kiel; Ashkan Golshani; John Chosay; Hiroyuki Aoki; M Clelia Ganoza
Molecular localization of a ribosome-dependent ATPase on Escherichia coli ribosomes.
Nucleic acids research 2006;34(4):1158-65.
2005: Jianhua Xu; Ashkan Golshani; Hiroyuki Aoki; Jaanus Remme; John Chosay; Dean L Shinabarger; M Clelia Ganoza
Protected nucleotide G2608 in 23S rRNA confers resistance to oxazolidinones in E. coli.
Biochemical and biophysical research communications 2005;328(2):471-6.
2004: Ashkan Golshani; Nevan J Krogan; John Xu; Marek Pacal; Xiao-Chum Yang; Ivan Ivanov; Miguel A Providenti; M Clelia Ganoza; Ivan G Ivanov; Mounir G Abouhaidar
Escherichia coli mRNAs with strong Shine/Dalgarno sequences also contain 5' end sequences complementary to domain # 17 on the 16S ribosomal RNA.
Biochemical and biophysical research communications 2004;316(4):978-83.
2002: M Clelia Ganoza; Michael C Kiel; Hiroyuki Aoki
Evolutionary conservation of reactions in translation.
Microbiology and molecular biology reviews : MMBR 2002;66(3):460-85, table of contents.
2002: Hiroyuki Aoki; Lizhu Ke; Susan M Poppe; Toni-Jo Poel; Elizabeth A Weaver; Robert C Gadwood; Richard C Thomas; Dean L Shinabarger; M Clelia Ganoza
Oxazolidinone antibiotics target the P site on Escherichia coli ribosomes.
Antimicrobial agents and chemotherapy 2002;46(4):1080-5.
2001: M Clelia Ganoza; Michael C Kiel
A ribosomal ATPase is a target for hygromycin B inhibition on Escherichia coli ribosomes.
Antimicrobial agents and chemotherapy 2001;45(10):2813-9.
2001: Michael C Kiel; M Clelia Ganoza
Functional interactions of an Escherichia coli ribosomal ATPase.
European journal of biochemistry / FEBS 2001;268(2):278-86.
2000: M Clelia Ganoza; Hiroyuki Aoki
Peptide bond synthesis: function of the efp gene product.
Biological chemistry 2000;381(7):553-9.
1999: Michael C Kiel; Hiroyuki Aoki; M Clelia Ganoza
Identification of a ribosomal ATPase in Escherichia coli cells.
Biochimie 1999;81(12):1097-108.
1999: J Lu; Hiroyuki Aoki; M Clelia Ganoza
Molecular characterization of a prokaryotic translation factor homologous to the eukaryotic initiation factor eIF4A.
The international journal of biochemistry & cell biology 1999;31(1):215-29.
1998: Steven M Swaney; Hiroyuki Aoki; M Clelia Ganoza; Dean L Shinabarger
The oxazolidinone linezolid inhibits initiation of protein synthesis in bacteria.
Antimicrobial agents and chemotherapy 1998;42(12):3251-5.
1997: Hiroyuki Aoki; K Dekany; S L Adams; M Clelia Ganoza
The gene encoding the elongation factor P protein is essential for viability and is required for protein synthesis.
The Journal of biological chemistry 1997;272(51):32254-9.
1997: Hiroyuki Aoki; S L Adams; M A Turner; M Clelia Ganoza
Molecular characterization of the prokaryotic efp gene product involved in a peptidyltransferase reaction.
Biochimie 1997;79(1):7-11.
1996: M Clelia Ganoza; Hiroyuki Aoki; N Burkhardt; B J Murphy
The ribosome as affinity matrix': efficient purification scheme for translation factors.
Biochimie 1996;78(1):51-61.
1995: M Clelia Ganoza; C Cunningham; R M Green
A new factor from Escherichia coli affects translocation of mRNA.
The Journal of biological chemistry 1995;270(44):26377-81.
1994: M Clelia Ganoza; B G Louis
Potential secondary structure at the translational start domain of eukaryotic and prokaryotic mRNAs.
Biochimie 1994;76(5):428-39.
1993: M Clelia Ganoza; Hiroyuki Aoki; Ivona Kozieradzki; I Schwartz
Reconstruction of translation. Evidence for the involvement of the rescue protein in the association/dissociation of ribosomal subunits.
European journal of biochemistry / FEBS 1993;217(3):839-47.
1992: Hiroyuki Aoki; P J Yaworsky; S D Patel; D Margolin-Brzezinski; K S Park; M Clelia Ganoza
The asparaginyl-tRNA synthetase gene encodes one of the complementing factors for thermosensitive translation in the Escherichia coli mutant strain, N4316.
European journal of biochemistry / FEBS 1992;209(2):511-21.
1992: M Clelia Ganoza; NA Farrow; G An
Effect of deletions 5' to the translation initiation sequence on the expression of an mRNA in animal cells.
Molecular biology reports 1992;16(4):277-84.
1991: Hiroyuki Aoki; S L Adams; D G Chung; M Yaguchi; S E Chuang; M Clelia Ganoza
Cloning, sequencing and overexpression of the gene for prokaryotic factor EF-P involved in peptide bond synthesis.
Nucleic acids research 1991;19(22):6215-20.
1991: M Clelia Ganoza; C Cunningham; D G Chung; T Neilson
A proposed role for IF-3 and EF-T in maintaining the specificity of prokaryotic initiation complex formation.
Molecular biology reports 1991;15(1):33-8.
1989: M Clelia Ganoza; D C Knauber; B Murphy; D Fallavolita; D G Chung
Regulation of gene expression at the translational level. The rescue factor reverses thermosensitive protein synthesis in N4316, a conditionally-lethal mutant of Escherichia coli defective in translation.
European journal of biochemistry / FEBS 1989;178(3):663-74.
1988: B G Louis; M Clelia Ganoza
Signals determining translational start-site recognition in eukaryotes and their role in prediction of genetic reading frames.
Molecular biology reports 1988;13(2):103-15.
1987: K Buckingham; D G Chung; T Neilson; M Clelia Ganoza
Recognition of translational termination signals.
Biochimica et biophysica acta 1987;909(2):92-8.
1987: R M Baxter; M Clelia Ganoza; N Zahid; D G Chung
Reconstruction of peptidyltransferase activity on 50S and 70S ribosomal particles by peptide fragments of protein L16.
European journal of biochemistry / FEBS 1987;163(3):473-9.
1987: M Clelia Ganoza; E C Kofoid; P Marlière; B G Louis
Potential secondary structure at translation-initiation sites.
Nucleic acids research 1987;15(1):345-60.
1985: M Clelia Ganoza; P Marliere; E C Kofoid; B G Louis
Initiator tRNA may recognize more than the initiation codon in mRNA: a model for translational initiation.
Proceedings of the National Academy of Sciences of the United States of America 1985;82(14):4587-91.
1985: M Clelia Ganoza; N Zahid; R M Baxter
Stimulation of peptidyltransferase reactions by a soluble protein.
European journal of biochemistry / FEBS 1985;146(2):287-94.
1984: M Clelia Ganoza; K Buckingham; P Hader; T Neilson
Effect of base sequence on in vitro protein-chain termination.
The Journal of biological chemistry 1984;259(22):14101-4.
1982: M Clelia Ganoza; P Sullivan; C Cunningham; P Hader; E C Kofoid; T Neilson
Effect of bases contiguous to AUG on translation initiation.
The Journal of biological chemistry 1982;257(14):8228-32.
1981: P A Hader; T Neilson; D Alkema; E C Kofoid; M Clelia Ganoza
Sequencing of short RNA on oligomers by proton nuclear magnetic resonance.
FEBS letters 1981;136(1):65-9.
1980: T Neilson; E C Kofoid; M Clelia Ganoza
Association of a synthetic precistronic region with 70S ribosomes is enhanced by an intact initiation triplet and a sequence complementary to the 3'-terminus of 16S rRNA.
Nucleic acids symposium series 1980;(7):313-23.