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Harold Garner

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Oligonucleotide Array Sequence Analysis

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Publications

TOP 3
Galindo C L; McIver L J; McCormick J F; Skinner M A; Xie Y; Gelhausen R A; Ng K; Kumar N M; Garner H R
Global microsatellite content distinguishes humans, primates, animals, and plants.
Katari S; Wallack M; Huebschman M; Pantano P; Garner H
Fabrication and evaluation of a near-infrared hyperspectral imaging system.
Long Tara C; Errami Mounir; George Angela C; Sun Zhaohui; Garner Harold R
Scientific integrity. Responding to possible plagiarism.

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2009: Galindo C L; McIver L J; McCormick J F; Skinner M A; Xie Y; Gelhausen R A; Ng K; Kumar N M; Garner H R
Global microsatellite content distinguishes humans, primates, animals, and plants.
Molecular biology and evolution 2009;26(12):2809-19.
2009: Katari S; Wallack M; Huebschman M; Pantano P; Garner H
Fabrication and evaluation of a near-infrared hyperspectral imaging system.
Journal of microscopy 2009;236(1):11-7.
2009: Long Tara C; Errami Mounir; George Angela C; Sun Zhaohui; Garner Harold R
Scientific integrity. Responding to possible plagiarism.
Science (New York, N.Y.) 2009;323(5919):1293-4.
2009: Tan Niclas C; Fisher Wayne G; Rosenblatt Kevin P; Garner Harold R
Application of multiple statistical tests to enhance mass spectrometry-based biomarker discovery.
BMC bioinformatics 2009;10():144.
2008: Marthandan N; Klyza S; Li S; Kwon Y U; Kodadek T; Garner H R
Construction and evaluation of an automated light directed protein-detecting microarray synthesizer.
IEEE transactions on nanobioscience 2008;7(1):20-7.
2008: Errami Mounir; Galindo Cristi L; Tassa Amina T; Dimaio John M; Hill Joseph A; Garner Harold R
Doxycycline attenuates isoproterenol- and transverse aortic banding-induced cardiac hypertrophy in mice.
The Journal of pharmacology and experimental therapeutics 2008;324(3):1196-203.
2008: Errami Mounir; Garner Harold
A tale of two citations.
Nature 2008;451(7177):397-9.
2008: Errami Mounir; Hicks Justin M; Fisher Wayne; Trusty David; Wren Jonathan D; Long Tara C; Garner Harold R
Déjà vu--a study of duplicate citations in Medline.
Bioinformatics (Oxford, England) 2008;24(2):243-9.
2007: Fisher Wayne G; Rosenblatt Kevin P; Fishman David A; Whiteley Gordon R; Mikulskis Alvydas; Kuzdzal Scott A; Lopez Mary F; Tan Niclas Chiang; German Dwight C; Garner Harold R
A robust biomarker discovery pipeline for high-performance mass spectrometry data.
Journal of bioinformatics and computational biology 2007;5(5):1023-45.
2007: German Dwight C; Gurnani Prem; Nandi Animesh; Garner Harold R; Fisher Wayne; Diaz-Arrastia Ramon; O'Suilleabhain Padraig; Rosenblatt Kevin P
Serum biomarkers for Alzheimer's disease: proteomic discovery.
Biomedicine & pharmacotherapy = Biomédecine & pharmacothérapie 2007;61(7):383-9.
2007: Burkart Mark F; Wren Jonathan D; Herschkowitz Jason I; Perou Charles M; Garner Harold R
Clustering microarray-derived gene lists through implicit literature relationships.
Bioinformatics (Oxford, England) 2007;23(15):1995-2003.
2007: Ng Kar-wai; Garner Harold R
Nome della Proteina: a protein identification resolution database.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2007;26(4):70-2.
2007: Errami Mounir; Wren Jonathan D; Hicks Justin M; Garner Harold R
eTBLAST: a web server to identify expert reviewers, appropriate journals and similar publications.
Nucleic acids research 2007;35(Web Server issue):W12-5.
2007: Garner Harold R; Hicks Justin; Wren Jonathan D; Errami Mounir
Medline: the knowledge buried therein, its potential, and cost.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2007;26(3):73-4.
2007: Khandheria Paras; Garner Harold R
Developing a modern web interface for database-driven bioinformatics tools.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2007;26(2):96-8.
2007: Crozier Stephen P; Garner Harold R
Ensemble-based RNA secondary structure characterization.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2007;26(1):72-86.
2007: Fondon John W; Garner Harold R
Detection of length-dependent effects of tandem repeat alleles by 3-D geometric decomposition of craniofacial variation.
Development genes and evolution 2007;217(1):79-85.
2007: Shah Jyoti K; Garner Harold R; White Michael A; Shames David S; Minna John D
sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database.
BMC bioinformatics 2007;8():178.
2007: Laidlaw Jeffrey; Gelfand Yevgeniy; Ng Kar-Wai; Garner Harold R; Ranganathan Rama; Benson Gary; Fondon John W
Elevated basal slippage mutation rates among the Canidae.
The Journal of heredity 2007;98(5):452-60.
2006: Lewis James; Ossowski Stephan; Hicks Justin; Errami Mounir; Garner Harold R
Text similarity: an alternative way to search MEDLINE.
Bioinformatics (Oxford, England) 2006;22(18):2298-304.
2006: Flood Elizabeth M; Kumar Robert S; Shah Rashmi; Amos Quinlan; Wren Jonathan D; Shohet Ralph V; Garner Harold R
Melatonin administration does not affect isoproterenol-induced LVH.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2006;25(3):84-7.
2005: Ferguson Deborah A; Muenster Matthew R; Zang Qun; Spencer Jeffrey A; Schageman Jeoffrey J; Lian Yun; Garner Harold R; Gaynor Richard B; Huff J Warren; Pertsemlidis Alexander; Ashfaq Raheela; Schorge John; Becerra Carlos; Williams Noelle S; Graff Jonathan M
Selective identification of secreted and transmembrane breast cancer markers using Escherichia coli ampicillin secretion trap.
Cancer research 2005;65(18):8209-17.
2005: Munjuluri Bala; Huebschman Michael L; Garner Harold R
Rapid hologram updates for real-time volumetric information displays.
Applied optics 2005;44(24):5076-85.
2005: Wren Jonathan D; Garner Harold R
Data-mining analysis suggests an epigenetic pathogenesis for type 2 diabetes.
Journal of biomedicine & biotechnology 2005;2005(2):104-12.
2005: Geho David; Lahar Nicholas; Gurnani Prem; Huebschman Michael; Herrmann Paul; Espina Virginia; Shi Alice; Wulfkuhle Julia; Garner Harold; Petricoin Emanuel; Liotta Lance A; Rosenblatt Kevin P
Pegylated, steptavidin-conjugated quantum dots are effective detection elements for reverse-phase protein microarrays.
Bioconjugate chemistry 2005;16(3):559-66.
2005: Mizumoto Norikatsu; Hui Francis; Edelbaum Dale; Weil M Ryan; Wren Jonathan D; Shalhevet David; Matsue Hiroyuki; Liu Lei; Garner Harold R; Takashima Akira
Differential activation profiles of multiple transcription factors during dendritic cell maturation.
The Journal of investigative dermatology 2005;124(4):718-24.
2005: Lian Yun; Garner Harold R
Evidence for the regulation of alternative splicing via complementary DNA sequence repeats.
Bioinformatics (Oxford, England) 2005;21(8):1358-64.
2005: Li Shuwei; Marthandan Nishanth; Bowerman Dawn; Garner Harold R; Kodadek Thomas
Photolithographic synthesis of cyclic peptide arrays using a differential deprotection strategy.
Chemical communications (Cambridge, England) 2005;(5):581-3.
2005: Wren Jonathan D; Chang Jeffrey T; Pustejovsky James; Adar Eytan; Garner Harold R; Altman Russ B
Biomedical term mapping databases.
Nucleic acids research 2005;33(Database issue):D289-93.
2004: Fondon John W; Garner Harold R
Molecular origins of rapid and continuous morphological evolution.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(52):18058-63.
2004: Wandstrat Amy E; Nguyen Charles; Limaye Nisha; Chan Alice Y; Subramanian Srividya; Tian Xiang-Hong; Yim Young-Sun; Pertsemlidis Alexander; Garner Harold R; Morel Laurence; Wakeland Edward K
Association of extensive polymorphisms in the SLAM/CD2 gene cluster with murine lupus.
Immunity 2004;21(6):769-80.
2004: Pertsemlidis Alexander; Garner Harold R
Text comparison based on dynamic programming.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2004;23(6):66-71.
2004: Belosludtsev Yuri Y; Bowerman Dawn; Weil Ryan; Marthandan Nishanth; Balog Robert; Luebke Kevin; Lawson Jonathan; Johnston Stephen A; Lyons C Rick; Obrien Kevin; Garner Harold R; Powdrill Thomas F
Organism identification using a genome sequence-independent universal microarray probe set.
BioTechniques 2004;37(4):654-8, 660.
2004: Ng Kar-wai; Lawson Jonathan; Garner Harold R
PathoGene: a pathogen coding sequence discovery and analysis resource.
BioTechniques 2004;37(2):218, 220-2.
2004: Weil M Ryan; Widlak Piotr; Minna John D; Garner Harold R
Global survey of chromatin accessibility using DNA microarrays.
Genome research 2004;14(7):1374-81.
2004: Li Shuwei; Bowerman Dawn; Marthandan Nishanth; Klyza Stanley; Luebke Kevin J; Garner Harold R; Kodadek Thomas
Photolithographic synthesis of peptoids.
Journal of the American Chemical Society 2004;126(13):4088-9.
2004: Luebke Kevin J; Carter Duane E; Garner Harold R; Brown Kathlynn C
Patterning adhesion of mammalian cells with visible light, tris(bipyridyl)ruthenium(II) chloride, and a digital micromirror array.
Journal of biomedical materials research. Part A 2004;68(4):696-703.
2004: Wren Jonathan D; Bekeredjian Raffi; Stewart Jelena A; Shohet Ralph V; Garner Harold R
Knowledge discovery by automated identification and ranking of implicit relationships.
Bioinformatics (Oxford, England) 2004;20(3):389-98.
2004: Wren Jonathan D; Garner Harold R
Shared relationship analysis: ranking set cohesion and commonalities within a literature-derived relationship network.
Bioinformatics (Oxford, England) 2004;20(2):191-8.
2004: Schageman Jeoffrey J; Horton Christopher J; Niu Sijing; Garner Harold R; Pertsemlidis Alexander
ELXR: a resource for rapid exon-directed sequence analysis.
Genome biology 2004;5(5):R36.
2003: Horvath Monica M; Fondon John W; Garner Harold R
Low hanging fruit: a subset of human cSNPs is both highly non-uniform and predictable.
Gene 2003;312():197-206.
2003: Peters Dixie L; Barber Robert C; Flood Elizabeth M; Garner Harold R; O'Keefe Grant E
Methodologic quality and genotyping reproducibility in studies of tumor necrosis factor -308 G-->A single nucleotide polymorphism and bacterial sepsis: implications for studies of complex traits.
Critical care medicine 2003;31(6):1691-6.
2003: Schageman Jeoffrey J; Ferguson Deborah A; Zang Qun; Spencer Jeffrey A; Huff J Warren; Graff Jonathan M; Lian Yun; Garner Harold R; Pertsemlidis Alexander
Reading the fine print of the human genome.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2003;22(2):105-8.
2003: Luebke Kevin J; Balog Robert P; Garner Harold R
Prioritized selection of oligodeoxyribonucleotide probes for efficient hybridization to RNA transcripts.
Nucleic acids research 2003;31(2):750-8.
2003: Tang Fuqiang; Flood Elizabeth M; Pertsemlidis Alexander; Garner Harold R
SNPCEQer II: the integrated detection and analysis of SNPs in DNA sequences.
Applied bioinformatics 2003;2(3):151-4.
2002: Kulkarni Amit V; Williams Noelle Sevilir; Lian Yun; Wren Jonathan D; Mittelman David; Pertsemlidis Alexander; Garner Harold R
ARROGANT: an application to manipulate large gene collections.
Bioinformatics (Oxford, England) 2002;18(11):1410-7.
2002: Balog Robert P; de Souza Y Emi Ponce; Tang Hue M; DeMasellis Gina M; Gao Boning; Avila Adrian; Gaban Desmond J; Mittelman David; Minna John D; Luebke Kevin J; Garner Harold R
Parallel assessment of CpG methylation by two-color hybridization with oligonucleotide arrays.
Analytical biochemistry 2002;309(2):301-10.
2002: Flood E M; Tang F; Horvath M M; Pertsemlidis A; Garner H R
SNPCEQer: detecting SNPs in sequences generated by the Beckman CEQ2000 DNA Analysis System.
BioTechniques 2002;33(4):814, 816, 818-20 passim.
2002: Talaat Adel M; Howard Susan T; Hale Walker; Lyons Rick; Garner Harold; Johnston Stephen Albert
Genomic DNA standards for gene expression profiling in Mycobacterium tuberculosis.
Nucleic acids research 2002;30(20):e104.
2002: Garner Harold R; Balog Robert P; Luebke Kevin J
The evolution of custom microarray manufacture.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2002;21(4):123-5.
2002: Huebschman Michael L; Schultz Roger A; Garner Harold R
Characteristics and capabilities of the hyperspectral imaging microscope.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2002;21(4):104-17.
2002: Weil Michael Ryan; Macatee Timothy; Garner Harold R
Toward a universal standard: comparing two methods for standardizing spotted microarray data.
BioTechniques 2002;32(6):1310-4.
2002: Wren Jonathan D; Mittelman David A; Garner Harold R
SIGNAL-Sequence Information and GeNomic AnaLysis.
Computer methods and programs in biomedicine 2002;68(2):177-81.
2002: Wren Jonathan D; Kulkarni Amit; Joslin John; Butow Ronald A; Garner Harold R
Cross-hybridization on PCR-spotted microarrays.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 2002;21(2):71-5.
2002: Schageman J J; Basit M; Gallardo T D; Garner H R; Shohet R V
MarC-V: a spreadsheet-based tool for analysis, normalization, and visualization of single cDNA microarray experiments.
BioTechniques 2002;32(2):338-40, 342, 344.
2002: Wren J D; Garner H R
Heuristics for identification of acronym-definition patterns within text: towards an automated construction of comprehensive acronym-definition dictionaries.
Methods of information in medicine 2002;41(5):426-34.
2001: Schultz R A; Nielsen T; Zavaleta J R; Ruch R; Wyatt R; Garner H R
Hyperspectral imaging: a novel approach for microscopic analysis.
Cytometry 2001;43(4):239-47.
2001: Forgacs E; Wren J D; Kamibayashi C; Kondo M; Xu X L; Markowitz S; Tomlinson G E; Muller C Y; Gazdar A F; Garner H R; Minna J D
Searching for microsatellite mutations in coding regions in lung, breast, ovarian and colorectal cancers.
Oncogene 2001;20(8):1005-9.
2001: Epstein C B; Waddle J A; Hale W; Davé V; Thornton J; Macatee T L; Garner H R; Butow R A
Genome-wide responses to mitochondrial dysfunction.
Molecular biology of the cell 2001;12(2):297-308.
2000: Pertsemlidis A; Pande A; Miller B; Schilling P; Wei M H; Lerman M I; Minna J D; Garner H R; Mittelman D
PANORAMA: an integrated Web-based sequence analysis tool and its role in gene discovery.
Genomics 2000;70(3):300-6.
2000: Liao B; Hale W; Epstein C B; Butow R A; Garner H R
MAD: a suite of tools for microarray data management and processing.
Bioinformatics (Oxford, England) 2000;16(10):946-7.
2000: Wren J D; Forgacs E; Fondon J W; Pertsemlidis A; Cheng S Y; Gallardo T; Williams R S; Shohet R V; Minna J D; Garner H R
Repeat polymorphisms within gene regions: phenotypic and evolutionary implications.
American journal of human genetics 2000;67(2):345-56.
2000: Kukanskis K A; Siddiquee Z; Shohet R V; Garner H R
Mix of sequencing technologies for sequence closure: an example.
BioTechniques 2000;28(4):630-2, 634.
2000: Wistuba I I; Behrens C; Virmani A K; Mele G; Milchgrub S; Girard L; Fondon J W; Garner H R; McKay B; Latif F; Lerman M I; Lam S; Gazdar A F; Minna J D
High resolution chromosome 3p allelotyping of human lung cancer and preneoplastic/preinvasive bronchial epithelium reveals multiple, discontinuous sites of 3p allele loss and three regions of frequent breakpoints.
Cancer research 2000;60(7):1949-60.
1999: Kukanskis K; Elkind J; Melendez J; Murphy T; Miller G; Garner H
Detection of DNA hybridization using the TISPR-1 surface plasmon resonance biosensor.
Analytical biochemistry 1999;274(1):7-17.
1998: Rayner S; Brignac S; Bumeister R; Belosludtsev Y; Ward T; Grant O; O'Brien K; Evans G A; Garner H R
MerMade: an oligodeoxyribonucleotide synthesizer for high throughput oligonucleotide production in dual 96-well plates.
Genome research 1998;8(7):741-7.
1998: Fondon J W; Mele G M; Brezinschek R I; Cummings D; Pande A; Wren J; O'Brien K M; Kupfer K C; Wei M H; Lerman M; Minna J D; Garner H R
Computerized polymorphic marker identification: experimental validation and a predicted human polymorphism catalog.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(13):7514-9.
1998: O'Brien K M; Schageman J J; Major T H; Evans G A; Garner H R
Improving read lengths by recomputing the matrices of Model 377 DNA Sequencers.
BioTechniques 1998;24(6):1014-6.
1998: O'Brien K M; Schageman J J; Evans G A; Garner H R
Reconstructing fragmented gel files created by Model 377 DNA Sequencers.
BioTechniques 1998;24(6):1004-5.
1998: O'Brien K M; Ironside M A; Athanasiou M C; Basit M A; Evans G A; Garner H R
Correcting data shifts in gel files created by Model 377 DNA Sequencers.
BioTechniques 1998;24(6):1002-3.
1998: Huang H; Garner H R
Gene Alert--a sequence search results keyword parser.
IEEE engineering in medicine and biology magazine : the quarterly magazine of the Engineering in Medicine & Biology Society 1998;17(2):119-22, 128.
1997: O'Brien K M; Fondon J W; Evans G A; Garner H R
Rescuing corrupted gel files from Model 377 and 373 DNA Sequencers.
BioTechniques 1997;22(6):1162-3.
1997: Li P; Kupfer K C; Davies C J; Burbee D; Evans G A; Garner H R
PRIMO: A primer design program that applies base quality statistics for automated large-scale DNA sequencing.
Genomics 1997;40(3):476-85.

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Harold Garner

Research Profile (preview)

Activities & Behaviors

Procedures

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Chemicals & Drugs

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Living Beings

Network (preview)

Publications

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Visualized networks:

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Research Profiles:

Geonetwork of Harold Garner (preview)

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