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Richard Garratt

Research Profile

Concepts & Ideas

Procedures

X Ray Crystallography

Chemicals & Drugs

Genes & Molecular Sequences

Amino Acid Sequences

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Escherichia coli

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Publications

TOP 3
Joci N A Macedo; Ivo A Marques; Humberto M Pereira; Napoleão F Valadares; Julio C P Damalio; Frederico M Ferreira; Richard C Garratt; Ana P U Araujo
The structure and properties of septin 3: a possible missing link in septin filament formation.
Napoleão F Valadares; Ivo de Almeida Marques; Humberto D'Muniz Pereira; Italo A Cavini; Rodrigo de Oliveira-Silva; Flávio Henrique-Silva; Hans R Kalbitzer; Claudia Elisabeth Munte; Andrea Soares-Costa; Richard C Garratt
X-ray crystallography and NMR studies of domain-swapped canecystatin-1.
Ivo de Almeida Marques; Ana Paula Ulian de Araújo; Wanius Garcia; José Manuel Andreu; Carlos Alfonso Botello; Julio Cesar Pissuti Damalio; Joci Neuby Alves Macedo; Napoleão Fonseca Valadares; Richard C Garratt
Septin C-terminal domain interactions: implications for filament stability and assembly.

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All Publications

2013: Joci N A Macedo; Ivo A Marques; Humberto M Pereira; Napoleão F Valadares; Julio C P Damalio; Frederico M Ferreira; Richard C Garratt; Ana P U Araujo
The structure and properties of septin 3: a possible missing link in septin filament formation.
The Biochemical journal 2013;450(1):95-105.
2013: Napoleão F Valadares; Ivo de Almeida Marques; Humberto D'Muniz Pereira; Italo A Cavini; Rodrigo de Oliveira-Silva; Flávio Henrique-Silva; Hans R Kalbitzer; Claudia Elisabeth Munte; Andrea Soares-Costa; Richard C Garratt
X-ray crystallography and NMR studies of domain-swapped canecystatin-1.
The FEBS journal 2013;280(4):1028-38.
2012: Ivo de Almeida Marques; Ana Paula Ulian de Araújo; Wanius Garcia; José Manuel Andreu; Carlos Alfonso Botello; Julio Cesar Pissuti Damalio; Joci Neuby Alves Macedo; Napoleão Fonseca Valadares; Richard C Garratt
Septin C-terminal domain interactions: implications for filament stability and assembly.
Cell biochemistry and biophysics 2012;62(2):317-28.
2012: Julio Cesar Pissuti Damalio; Joci Neuby Alves Macêdo; José M Andreu; Ivo de Almeida Marques; Wanius Garcia; Richard C Garratt; Rafael Giraldo; Ana Paula Ulian Araújo
Self assembly of human septin 2 into amyloid filaments.
Biochimie 2012;94(3):628-36.
2012: Alexandre Cassago; Sandra M G Dias; Amanda P S Ferreira; Igor M Ferreira; Camila Fornezari; Richard C Garratt; Emerson R M Gomes; Kai Su Greene; Humberto M Pereira; Andre L B Ambrosio
Mitochondrial localization and structure-based phosphate activation mechanism of Glutaminase C with implications for cancer metabolism.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(4):1092-7.
2011: Vitor Hugo Balasco Serrão; Otavio Henrique Thiemann; Rafaela Leite Marçal; Fernando Alessandro; Victor Emanoel Armini Caldas; Humberto D'Muniz Pereira; Richard C Garratt
Promiscuous interactions of human septins: the GTP binding domain of SEPT7 forms filaments within the crystal.
FEBS letters 2011;585(24):3868-73.
2011: Ricardo Cabrera; Mauricio Baez; Humberto M Pereira; Andrés Caniuguir; Richard C Garratt; Jorge Babul
The crystal complex of phosphofructokinase-2 of Escherichia coli with fructose-6-phosphate: kinetic and structural analysis of the allosteric ATP inhibition.
The Journal of biological chemistry 2011;286(7):5774-83.
2011: Humberto D'Muniz Pereira; Glaucius Oliva; Richard C Garratt
Purine nucleoside phosphorylase from Schistosoma mansoni in complex with ribose-1-phosphate.
Journal of synchrotron radiation 2011;18(1):62-5.
2011: J F R Bachega; Lucas Bleicher; E R Horjales; Patrícia S Santiago; Richard C Garratt; Marcel Tabak
Crystallization and preliminary structural analysis of the giant haemoglobin from Glossoscolex paulistus at 3.2 Å.
Journal of synchrotron radiation 2011;18(1):24-8.
2010: Humberto M Pereira; Valério Berdini; Mariana R Ferri; Anne Cleasby; Richard C Garratt
Crystal structure of Schistosoma purine nucleoside phosphorylase complexed with a novel monocyclic inhibitor.
Acta tropica 2010;114(2):97-102.
2010: Napoleão F Valadares; Márcia Dellamano; Andrea Soares-Costa; Flávio Henrique-Silva; Richard C Garratt
Molecular determinants of improved cathepsin B inhibition by new cystatins obtained by DNA shuffling.
BMC structural biology 2010;10():30.
2010: Humberto M Pereira; Martha M Rezende; Marcelo S Castilho; Glaucius Oliva; Richard C Garratt
Adenosine binding to low-molecular-weight purine nucleoside phosphorylase: the structural basis for recognition based on its complex with the enzyme from Schistosoma mansoni.
Acta crystallographica. Section D, Biological crystallography 2010;66(Pt 1):73-9.
2009: Napoleão F Valadares; Lívia B Salum; Igor Polikarpov; Adriano D Andricopulo; Richard C Garratt
Role of halogen bonds in thyroid hormone receptor selectivity: pharmacophore-based 3D-QSSR studies.
Journal of chemical information and modeling 2009;49(11):2606-16.
2009: Jose Fernando Ruggiero Bachega; Marcos Vicente Albuquerque Salles Navarro; Lucas Bleicher; Raquel Kely Bortoleto-Bugs; Daniel Dive; Pascal Hoffmann; Eric Viscogliosi; Richard C Garratt
Systematic structural studies of iron superoxide dismutases from human parasites and a statistical coupling analysis of metal binding specificity.
Proteins 2009;77(1):26-37.
2008: João R C Muniz; Andre L B Ambrosio; Heloisa S Selistre-de-Araujo; Márcia R Cominetti; Ana Maria Moura da Silva; Glaucius Oliva; Richard C Garratt; Dulce H F Souza
The three-dimensional structure of bothropasin, the main hemorrhagic factor from Bothrops jararaca venom: insights for a new classification of snake venom metalloprotease subgroups.
Toxicon : official journal of the International Society on Toxinology 2008;52(7):807-16.
2008: Ricardo Cabrera; Andre L B Ambrosio; Richard C Garratt; Victoria Guixé; Jorge Babul
Crystallographic structure of phosphofructokinase-2 from Escherichia coli in complex with two ATP molecules. Implications for substrate inhibition.
Journal of molecular biology 2008;383(3):588-602.
2008: Wanius Garcia; Nathalia C Rodrigues; Mario de Oliveira Neto; Ana Paula Ulian de Araújo; Igor Polikarpov; Manami Tanaka; Tomoo Tanaka; Richard C Garratt
The stability and aggregation properties of the GTPase domain from human SEPT4.
Biochimica et biophysica acta 2008;1784(11):1720-7.
2008: Káthia M Honório; Lívia B Salum; Richard C Garratt; Igor Polikarpov; Adriano D Andricopulo
Two- and three-dimensional quantitative structure-activity relationships studies on a series of liver x receptor ligands.
The open medicinal chemistry journal 2008;2():87-96.
2007: Humberto M Pereira; V Berdini; Anne Cleasby; Richard C Garratt
Crystal structure of calf spleen purine nucleoside phosphorylase complexed to a novel purine analogue.
FEBS letters 2007;581(26):5082-6.
2007: Wanius Garcia; Ana Paula Ulian de Araújo; Flávio Alves Lara; Débora Foguel; Manami Tanaka; Tomoo Tanaka; Richard C Garratt
An intermediate structure in the thermal unfolding of the GTPase domain of human septin 4 (SEPT4/Bradeion-beta) forms amyloid-like filaments in vitro.
Biochemistry 2007;46(39):11101-9.
2007: Marcos V de A S Navarro; Sandra M Gomes Dias; Luciane V Mello; Maria Teresa da Silva Giotto; Sabine Gavalda; Casimir Blonski; Richard C Garratt; Daniel J Rigden
Structural flexibility in Trypanosoma brucei enolase revealed by X-ray crystallography and molecular dynamics.
The FEBS journal 2007;274(19):5077-89.
2007: Napoleão F Valadares; Marcelo S Castilho; Igor Polikarpov; Richard C Garratt
2D QSAR studies on thyroid hormone receptor ligands.
Bioorganic & medicinal chemistry 2007;15(13):4609-17.
2007: Andre L B Ambrosio; Sandra M G Dias; Igor Polikarpov; Robert B Zurier; Sumner H Burstein; Richard C Garratt
Ajulemic acid, a synthetic nonpsychoactive cannabinoid acid, bound to the ligand binding domain of the human peroxisome proliferator-activated receptor gamma.
The Journal of biological chemistry 2007;282(25):18625-33.
2006: Luiz F L Reis; Marie-Anne Van Sluys; Richard C Garratt; Humberto M Pereira; Mauro Teixeira
GMOs: building the future on the basis of past experience.
Anais da Academia Brasileira de Ciências 2006;78(4):667-86.
2006: Wanius Garcia; Ana Paula Ulian de Araújo; Mario de Oliveira Neto; Michel R M Ballestero; Igor Polikarpov; Manami Tanaka; Tomoo Tanaka; Richard C Garratt
Dissection of a human septin: definition and characterization of distinct domains within human SEPT4.
Biochemistry 2006;45(46):13918-31.
2006: Ricardo Cabrera; Andrés Caniuguir; Andre L B Ambrosio; Victoria Guixé; Richard C Garratt; Jorge Babul
Crystallization and preliminary crystallographic analysis of the tetrameric form of phosphofructokinase-2 from Escherichia coli, a member of the ribokinase family.
Acta crystallographica. Section F, Structural biology and crystallization communications 2006;62(Pt 9):935-7.
2006: Alessandro S Nascimento; Sandra M G Dias; Fábio M Nunes; Ricardo Aparício; Andre L B Ambrosio; Lucas Bleicher; Ana Carolina M Figueira; Maria A M Santos; Mário de Oliveira Neto; Hannes Fischer; Marie Togashi; Aldo F Craievich; Richard C Garratt; John D Baxter; Paul Webb; Igor Polikarpov
Structural rearrangements in the thyroid hormone receptor hinge domain and their putative role in the receptor function.
Journal of molecular biology 2006;360(3):586-98.
2005: Humberto D'Muniz Pereira; Glória Regina Franco; Anne Cleasby; Richard C Garratt
Structures for the potential drug target purine nucleoside phosphorylase from Schistosoma mansoni causal agent of schistosomiasis.
Journal of molecular biology 2005;353(3):584-99.
2005: Marcos Vicente de A S Navarro; Débora F Vierira; Ronaldo A P Nagem; Ana Paula U de Araújo; Maria Luiza V Oliva; Richard C Garratt
Crystallization and preliminary X-ray analysis of a novel Kunitz-type kallikrein inhibitor from Bauhinia bauhinioides.
Acta crystallographica. Section F, Structural biology and crystallization communications 2005;61(Pt 10):910-3.
2005: Sandro Hillebrand; Wanius Garcia; Marcelo Delmar Cantú; Ana Paula Ulian de Araújo; Manami Tanaka; Tomoo Tanaka; Richard C Garratt; Emanuel Carrilho
In vitro monitoring of GTPase activity and enzyme kinetics studies using capillary electrophoresis.
Analytical and bioanalytical chemistry 2005;383(1):92-7.
2005: Claudia Elisabeth Munte; Luciano Vilela; Hans Robert Kalbitzer; Richard C Garratt
Solution structure of human proinsulin C-peptide.
The FEBS journal 2005;272(16):4284-93.
2005: Ronaldo A P Nagem; A L B Ambrosio; Adriana Rojas; M V A S Navarro; Alexander M Golubev; Richard C Garratt; Igor Polikarpov
Getting the most out of X-ray home sources.
Acta crystallographica. Section D, Biological crystallography 2005;61(Pt 8):1022-30.
2005: Andre L B Ambrosio; M Cristina Nonato; Heloísa S Selistre de Araújo; Raghuvir K Arni; Richard J Ward; Charlotte L Ownby; Dulce H F de Souza; Richard C Garratt
A molecular mechanism for Lys49-phospholipase A2 activity based on ligand-induced conformational change.
The Journal of biological chemistry 2005;280(8):7326-35.
2004: Adriana Rojas; Ronaldo A P Nagem; Kirill N Neustroev; Michael Arand; M Adamska; Elena V Eneyskaya; Anna Kulminskaya; Richard C Garratt; Alexander M Golubev; Igor Polikarpov
Crystal structures of beta-galactosidase from Penicillium sp. and its complex with galactose.
Journal of molecular biology 2004;343(5):1281-92.
2004: Denise Osiro; João Renato C Muniz; Helvécio Della Coleta Filho; Alessandra Alves de Sousa; Marcos Antonio Machado; Richard C Garratt; Luiz Alberto Colnago
Fatty acid synthesis in Xylella fastidiosa: correlations between genome studies, 13C NMR data, and molecular models.
Biochemical and biophysical research communications 2004;323(3):987-95.
2004: Rosa M F Cardoso; Carlos H T P Silva; Ana Paula Ulian de Araújo; Tomoo Tanaka; Manami Tanaka; Richard C Garratt
Structure of the cytosolic Cu,Zn superoxide dismutase from Schistosoma mansoni.
Acta crystallographica. Section D, Biological crystallography 2004;60(Pt 9):1569-78.
2004: João Renato C Muniz; Claudia A Alves; Celina de Pieri; Leila M Beltramini; Heloisa S Selistre-de-Araújo; André L Vettore; Felipe Rodrigues da Silva; Paulo Arruda; Richard C Garratt; Glaucius Oliva; Dulce H F Souza
Overexpression, purification, biochemical characterization, and molecular modeling of recombinant GDP-mannosyltransferase (GumH) from Xylella fastidiosa.
Biochemical and biophysical research communications 2004;315(2):485-92.
2003: Maria Teresa da Silva Giotto; Véronique Hannaert; Didier Vertommen; Marcos V de A S Navarro; Mark H Rider; Paul A M Michels; Richard C Garratt; Daniel J Rigden
The crystal structure of Trypanosoma brucei enolase: visualisation of the inhibitory metal binding site III and potential as target for selective, irreversible inhibition.
Journal of molecular biology 2003;331(3):653-65.
2003: Véronique Hannaert; Marie-Astrid Albert; Daniel J Rigden; Maria Teresa da Silva Giotto; Otavio Henrique Thiemann; Richard C Garratt; Joris Van Roy; Fred R Opperdoes; Paul A M Michels
Kinetic characterization, structure modelling studies and crystallization of Trypanosoma brucei enolase.
European journal of biochemistry / FEBS 2003;270(15):3205-13.
2003: Humberto M Pereira; Anne Cleasby; Sérgio D J Pena S; Glória R Franco G; Richard C Garratt
Cloning, expression and preliminary crystallographic studies of the potential drug target purine nucleoside phosphorylase from Schistosoma mansoni.
Acta crystallographica. Section D, Biological crystallography 2003;59(Pt 6):1096-9.
2003: Ricardo Cabrera; Hannes Fischer; Stefano Trapani; Aldo F Craievich; Richard C Garratt; Victoria Guixé; Jorge Babul
Domain motions and quaternary packing of phosphofructokinase-2 from Escherichia coli studied by small angle x-ray scattering and homology modeling.
The Journal of biological chemistry 2003;278(15):12913-9.
2003: Artur Cordeiro; P H C Godoi; Carlos H T P Silva; Richard C Garratt; Glaucius Oliva; Otavio Henrique Thiemann
Crystal structure of human phosphoglucose isomerase and analysis of the initial catalytic steps.
Biochimica et biophysica acta 2003;1645(2):117-22.
2002: Carolina Bosch Cabral; Hidetake Imasato; José C Rosa; Hélen Julie Laure; Carlos Henrique Tomich de Paula da Silva; Marcel Tabak; Richard C Garratt; Lewis J Greene
Fluorescence properties of tryptophan residues in the monomeric d-chain of Glossoscolex paulistus hemoglobin: an interpretation based on a comparative molecular model.
Biophysical chemistry 2002;97(2-3):139-57.
2001: Rosa M F Cardoso; Carlos Henrique Tomich de Paula da Silva; Ana Paula Ulian de Araújo; Tomoo Tanaka; Manami Tanaka; Richard C Garratt
Expression and preliminary X-ray diffraction studies of cytosolic Cu,Zn superoxide dismutase from Schistosoma mansoni.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 12):1877-80.
2001: Dulce H F Souza; Heloisa S Selistre-de-Araujo; Ana Maria Moura da Silva; Maisa S Della-Casa; Glaucius Oliva; Richard C Garratt
Crystallization and preliminary X-ray analysis of jararhagin, a metalloproteinase/disintegrin from Bothrops jararaca snake venom.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 8):1135-7.
2001: Isabel Fátima Correia Batista; M Cristina Nonato; M R Bonfadini; Leila M Beltramini; Maria Luiza V Oliva; Misako U Sampaio; Claudio A M Sampaio; Richard C Garratt
Preliminary crystallographic studies of EcTI, a serine proteinase inhibitor from Enterolobium contortisiliquum seeds.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 4):602-4.
2001: M Cristina Nonato; Richard C Garratt; YP Mascarenhas; W D Jesus; Marina T Assakura; Solange M T Serrano; Glaucius Oliva
Crystallization and preliminary crystallographic studies of a phospholipase A2 from the venom of the Brazilian snake Bothrops moojeni.
Acta crystallographica. Section D, Biological crystallography 2001;57(Pt 4):599-601.
2001: W H Lee; Maria Teresa da Silva Giotto; Sérgio Marangoni; Marcos H Toyama; Igor Polikarpov; Richard C Garratt
Structural basis for low catalytic activity in Lys49 phospholipases A2--a hypothesis: the crystal structure of piratoxin II complexed to fatty acid.
Biochemistry 2001;40(1):28-36.
2000: Lucimara A Forato; Luiz Alberto Colnago; Richard C Garratt; M A Lopes
Identification of free fatty acids in maize protein bodies and purified alpha zeins by (13)C and (1)H nuclear magnetic resonance.
Biochimica et biophysica acta 2000;1543(1):106-14.
2000: Dulce H F Souza; Heloisa S Selistre-de-Araujo; Richard C Garratt
Determination of the three-dimensional structure of toxins by protein crystallography.
Toxicon : official journal of the International Society on Toxinology 2000;38(10):1307-53.
2000: Ana Paula U Araújo; Glaucius Oliva; Flávio Henrique-Silva; Richard C Garratt; O Cáceres; Leila M Beltramini
Influence of the histidine tail on the structure and activity of recombinant chlorocatechol 1,2-dioxygenase.
Biochemical and biophysical research communications 2000;272(2):480-4.
1999: Dulce H F Souza; L M Eugenio; Jeffrey E Fletcher; MS Jiang; Richard C Garratt; Glaucius Oliva; Heloisa S Selistre-de-Araujo
Isolation and structural characterization of a cytotoxic L-amino acid oxidase from Agkistrodon contortrix laticinctus snake venom: preliminary crystallographic data.
Archives of biochemistry and biophysics 1999;368(2):285-90.
1998: P S de Oliveira; Richard C Garratt
The reconstruction of atomic co-ordinates from a protein stereo ribbon diagram when additional information for sufficient sidechain positions is available.
Journal of computer-aided molecular design 1998;12(6):605-14.
1998: Dulce H F Souza; Richard C Garratt; Ana Paula U Araújo; B G Guimarães; W D Jesus; Paul A M Michels; Véronique Hannaert; Glaucius Oliva
Trypanosoma cruzi glycosomal glyceraldehyde-3-phosphate dehydrogenase: structure, catalytic mechanism and targeted inhibitor design.
FEBS letters 1998;424(3):131-5.
1998: E Viana; Carlos Henrique Tomich de Paula da Silva; Marcel Tabak; Hidetake Imasato; Richard C Garratt
A molecular model for the d chain of the giant haemoglobin from Lumbricus terrestris and its implications for subunit assembly.
Biochimica et biophysica acta 1998;1383(1):130-42.
1998: Maria Teresa da Silva Giotto; Richard C Garratt; Glaucius Oliva; YP Mascarenhas; José R Giglio; A C O Cintra; Walter Filgueira de Azevedo; Raghuvir K Arni; R J Ward
Crystallographic and spectroscopic characterization of a molecular hinge: conformational changes in bothropstoxin I, a dimeric Lys49-phospholipase A2 homologue.
Proteins 1998;30(4):442-54.
1997: Glória Regina Franco; Richard C Garratt; M Tanaka; Andrew J G Simpson; Sergio Pena
Characterization of a Schistosoma mansoni gene encoding a homologue of the Y-box binding protein.
Gene 1997;198(1-2):5-16.
1997: M Cristina Nonato; Richard C Garratt; C H Schleicher; J A Santomé; Glaucius Oliva
Crystallization and preliminary crystallographic studies of calgranulin C, an S100-like calcium-binding protein from pig granulocytes.
Acta crystallographica. Section D, Biological crystallography 1997;53(Pt 2):200-2.
1997: P S de Oliveira; Richard C Garratt; YP Mascarenhas; Leila M Beltramini; EBERT HANNA; I Harvey; Glaucius Oliva
Crystallization and preliminary crystallographic data of a neutrophil migration-inducing lectin (KM+) extracted from the seed of Artocarpus integrifolia.
Proteins 1997;27(1):157-9.
1996: J A Barbosa; J W Saldanha; Richard C Garratt
Novel features of serine protease active sites and specificity pockets: sequence analysis and modelling studies of glutamate-specific endopeptidases and epidermolytic toxins.
Protein engineering 1996;9(7):591-601.
1995: G Oliva; M R Fontes; Richard C Garratt; M M Altamirano; Mario L Calcagno; Eduardo Horjales
Structure and catalytic mechanism of glucosamine 6-phosphate deaminase from Escherichia coli at 2.1 A resolution.
Structure (London, England : 1993) 1995;3(12):1323-32.
1993: J A Barbosa; Richard C Garratt; J W Saldanha
A structural model for the glutamate-specific endopeptidase from Streptomyces griseus that explains substrate specificity.
FEBS letters 1993;324(1):45-50.
1993: Richard C Garratt; Glaucius Oliva; Ignez Caracelli; Adilson Leite; Paulo Arruda
Studies of the zein-like alpha-prolamins based on an analysis of amino acid sequences: implications for their evolution and three-dimensional structure.
Proteins 1993;15(1):88-99.
1992: Eduardo Horjales; M M Altamirano; Mario L Calcagno; Z Dauter; K Wilson; Richard C Garratt; G Oliva
Crystallization and preliminary crystallographic studies of glucosamine-6-phosphate deaminase from Escherichia coli K12.
Journal of molecular biology 1992;226(4):1283-6.