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Galina Glazko

Research Profile

Phenomena

Evolution, Molecular

Concepts & Ideas

Occupations

Computational Biology

Devices

Oligonucleotide Array Sequence Analysis

Procedures

Chemicals & Drugs

Living Beings

Lampreys

Physiology

Genes & Molecular Sequences

Amino Acid Sequences

Co-author Network

Publications

TOP 3
Shailesh Tripathi; Galina V Glazko; Frank Emmert-Streib
Ensuring the statistical soundness of competitive gene set approaches: gene filtering and genome-scale coverage are essential.
Y Rahmatallah; Frank Emmert-Streib; Galina V Glazko
Gene set analysis for self-contained tests: complex null and specific alternative hypotheses.
Lev Y Yampolsky; Galina V Glazko; James D Fry
Evolution of gene expression and expression plasticity in long-term experimental populations of Drosophila melanogaster maintained under constant and variable ethanol stress.

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All Publications

2013: Shailesh Tripathi; Galina V Glazko; Frank Emmert-Streib
Ensuring the statistical soundness of competitive gene set approaches: gene filtering and genome-scale coverage are essential.
Nucleic acids research 2013;41(7):e82.
2012: Y Rahmatallah; Frank Emmert-Streib; Galina V Glazko
Gene set analysis for self-contained tests: complex null and specific alternative hypotheses.
Bioinformatics (Oxford, England) 2012;28(23):3073-80.
2012: Lev Y Yampolsky; Galina V Glazko; James D Fry
Evolution of gene expression and expression plasticity in long-term experimental populations of Drosophila melanogaster maintained under constant and variable ethanol stress.
Molecular ecology 2012;21(17):4287-99.
2012: Frank Emmert-Streib; Galina V Glazko; Shailesh Tripathi; Ricardo de Matos Simoes; Matthias Dehmer
A Bayesian analysis of the chromosome architecture of human disorders by integrating reductionist data.
Scientific reports 2012;2():513.
2012: Frank Emmert-Streib; Galina V Glazko; Gökmen Altay; Ricardo de Matos Simoes
Statistical inference and reverse engineering of gene regulatory networks from observational expression data.
Frontiers in genetics 2012;3():8.
2010: Rui Hu; Xing Qiu; Galina V Glazko
A new gene selection procedure based on the covariance distance.
Bioinformatics (Oxford, England) 2010;26(3):348-54.
2010: Galina V Glazko; Arcady Mushegian
Measuring gene expression divergence: the distance to keep.
Biology direct 2010;5():51.
2009: Galina V Glazko; Frank Emmert-Streib
Unite and conquer: univariate and multivariate approaches for finding differentially expressed gene sets.
Bioinformatics (Oxford, England) 2009;25(18):2348-54.
2009: Rui Hu; Xing Qiu; Galina V Glazko; Lev Klebanov; Andrei Yakovlev
Detecting intergene correlation changes in microarray analysis: a new approach to gene selection.
BMC bioinformatics 2009;10():20.
2007: Lev Klebanov; Galina V Glazko; Peter Salzman; Andrei Yakovlev; Yuanhui Xiao
A multivariate extension of the gene set enrichment analysis.
Journal of bioinformatics and computational biology 2007;5(5):1139-53.
2007: Igor Rogozin; Lakshminarayan M Iyer; Lizhi Liang; Galina V Glazko; Victoria G Liston; Youri I Pavlov; L Aravind; Zeev Pancer
Evolution and diversification of lamprey antigen receptors: evidence for involvement of an AID-APOBEC family cytosine deaminase.
Nature immunology 2007;8(6):647-56.
2007: Brian Morray; Ilan Goldenberg; Arthur J Moss; Wojciech Zareba; Daniel Ryan; Scott McNitt; Shirley Eberly; Galina V Glazko; Jehu Mathew
Polymorphisms in the paraoxonase and endothelial nitric oxide synthase genes and the risk of early-onset myocardial infarction.
The American journal of cardiology 2007;99(8):1100-5.
2007: Galina V Glazko; Vladimir Makarenkov; Jing Liu; Arcady Mushegian
Evolutionary history of bacteriophages with double-stranded DNA genomes.
Biology direct 2007;2():36.
2006: Sue L Jaspersen; Adriana E Martin; Galina V Glazko; Thomas H Giddings; Garry Morgan; Arcady Mushegian; Mark Winey
The Sad1-UNC-84 homology domain in Mps3 interacts with Mps2 to connect the spindle pole body with the nuclear envelope.
The Journal of cell biology 2006;174(5):665-75.
2006: Jing Liu; Galina V Glazko; Arcady Mushegian
Protein repertoire of double-stranded DNA bacteriophages.
Virus research 2006;117(1):68-80.
2006: Galina V Glazko; Michael Coleman; Arcady Mushegian
Similarity searches in genome-wide numerical data sets.
Biology direct 2006;1():13.
2006: Galina V Glazko; Vladimir N Babenko; Eugene V Koonin; Igor Rogozin
Mutational hotspots in the TP53 gene and, possibly, other tumor suppressors evolve by positive selection.
Biology direct 2006;1():4.
2005: Matthew N Alder; Igor Rogozin; Lakshminarayan M Iyer; Galina V Glazko; Max D Cooper; Zeev Pancer
Diversity and function of adaptive immune receptors in a jawless vertebrate.
Science (New York, N.Y.) 2005;310(5756):1970-3.
2005: Galina V Glazko; Alexander Gordon; Arcady Mushegian
The choice of optimal distance measure in genome-wide datasets.
Bioinformatics (Oxford, England) 2005;21 Suppl 3():iii3-11.
2005: Eugene V Koonin; Igor Rogozin; Galina V Glazko
p53 gain-of-function: tumor biology and bioinformatics come together.
Cell cycle (Georgetown, Tex.) 2005;4(5):686-8.
2005: Galina V Glazko; Vamsi Veeramachaneni; Masatoshi Nei; Wojciech Makałowski
Eighty percent of proteins are different between humans and chimpanzees.
Gene 2005;346():215-9.
2005: Galina V Glazko; Eugene V Koonin; Igor Rogozin
Molecular dating: ape bones agree with chicken entrails.
Trends in genetics : TIG 2005;21(2):89-92.
2004: Galina V Glazko; Eugene V Koonin; Igor Rogozin
Mutation hotspots in the p53 gene in tumors of different origin: correlation with evolutionary conservation and signs of positive selection.
Biochimica et biophysica acta 2004;1679(2):95-106.
2004: Galina V Glazko; Arcady Mushegian
Detection of evolutionarily stable fragments of cellular pathways by hierarchical clustering of phyletic patterns.
Genome biology 2004;5(5):R32.
2003: Galina V Glazko; Masatoshi Nei
Estimation of divergence times for major lineages of primate species.
Molecular biology and evolution 2003;20(3):424-34.
2003: Galina V Glazko; Eugene V Koonin; Igor Rogozin; Svetlana A Shabalina
A significant fraction of conserved noncoding DNA in human and mouse consists of predicted matrix attachment regions.
Trends in genetics : TIG 2003;19(3):119-24.
2003: I King Jordan; Igor Rogozin; Galina V Glazko; Eugene V Koonin
Origin of a substantial fraction of human regulatory sequences from transposable elements.
Trends in genetics : TIG 2003;19(2):68-72.
2002: Yoshiyuki Suzuki; Galina V Glazko; Masatoshi Nei
Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(25):16138-43.
2002: Masatoshi Nei; Galina V Glazko
The Wilhelmine E. Key 2001 Invitational Lecture. Estimation of divergence times for a few mammalian and several primate species.
The Journal of heredity 2002;93(3):157-64.
2001: Masatoshi Nei; P Xu; Galina V Glazko
Estimation of divergence times from multiprotein sequences for a few mammalian species and several distantly related organisms.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(5):2497-502.