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Takashi Gojobori

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Publications

TOP 3
Suzuki Yoshiyuki; Gojobori Takashi; Kumar Sudhir
Methods for incorporating the hypermutability of CpG dinucleotides in detecting natural selection operating at the amino acid sequence level.
Liu Qing-Xin; Hiramoto Masaki; Ueda Hitoshi; Gojobori Takashi; Hiromi Yasushi; Hirose Susumu
Midline governs axon pathfinding by coordinating expression of two major guidance systems.
Jin Lihua; Kryukov Kirill; Suzuki Yoshiyuki; Imanishi Tadashi; Ikeo Kazuho; Gojobori Takashi
The evolutionary study of small RNA-directed gene silencing pathways by investigating RNase III enzymes.

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All Publications

2009: Suzuki Yoshiyuki; Gojobori Takashi; Kumar Sudhir
Methods for incorporating the hypermutability of CpG dinucleotides in detecting natural selection operating at the amino acid sequence level.
Molecular biology and evolution 2009;26(10):2275-84.
2009: Liu Qing-Xin; Hiramoto Masaki; Ueda Hitoshi; Gojobori Takashi; Hiromi Yasushi; Hirose Susumu
Midline governs axon pathfinding by coordinating expression of two major guidance systems.
Genes & development 2009;23(10):1165-70.
2009: Jin Lihua; Kryukov Kirill; Suzuki Yoshiyuki; Imanishi Tadashi; Ikeo Kazuho; Gojobori Takashi
The evolutionary study of small RNA-directed gene silencing pathways by investigating RNase III enzymes.
Gene 2009;435(1-2):1-8.
2009: Komiyama Tomoyoshi; Kobayashi Hiroyuki; Tateno Yoshio; Inoko Hidetoshi; Gojobori Takashi; Ikeo Kazuho
An evolutionary origin and selection process of goldfish.
Gene 2009;430(1-2):5-11.
2009: Uehara Shigeyuki; Izumi Yoshiko; Kubo Yuko; Wang Chi Chiu; Mineta Katsuhiko; Ikeo Kazuho; Gojobori Takashi; Tachibana Masayoshi; Kikuchi Toshihiko; Kobayashi Toshimitsu; Shibahara Shigeki; Taya Choji; Yonekawa Hiromichi; Shiroishi Toshihiko; Yamamoto Hiroaki
Specific expression of Gsta4 in mouse cochlear melanocytes: a novel role for hearing and melanocyte differentiation.
Pigment cell & melanoma research 2009;22(1):111-9.
2009: Fukuchi Satoshi; Homma Keiichi; Minezaki Yoshiaki; Gojobori Takashi; Nishikawa Ken
Development of an accurate classification system of proteins into structured and unstructured regions that uncovers novel structural domains: its application to human transcription factors.
BMC structural biology 2009;9():26.
2009: Mano Shuhei; Endo Takaho A; Oka Akira; Ozawa Akira; Gojobori Takashi; Inoko Hidetoshi
Detecting linkage between a trait and a marker in a random mating population without pedigree record.
PloS one 2009;4(3):e4956.
2009: Clemente José C; Ikeo Kazuho; Valiente Gabriel; Gojobori Takashi
Optimized ancestral state reconstruction using Sankoff parsimony.
BMC bioinformatics 2009;10():51.
2008: Akihito; Fumihito Akishinonomiya; Ikeda Yuji; Aizawa Masahiro; Makino Takashi; Umehara Yumi; Kai Yoshiaki; Nishimoto Yuriko; Hasegawa Masami; Nakabo Tetsuji; Gojobori Takashi
Evolution of Pacific Ocean and the Sea of Japan populations of the gobiid species, Pterogobius elapoides and Pterogobius zonoleucus, based on molecular and morphological analyses.
Gene 2008;427(1-2):7-18.
2008: Jin Lihua; Kryukov Kirill; Clemente Jose C; Komiyama Tomoyoshi; Suzuki Yoshiyuki; Imanishi Tadashi; Ikeo Kazuho; Gojobori Takashi
The evolutionary relationship between gene duplication and alternative splicing.
Gene 2008;427(1-2):19-31.
2008: Takeda Jun-Ichi; Suzuki Yutaka; Sakate Ryuichi; Sato Yoshiharu; Seki Masahide; Irie Takuma; Takeuchi Nono; Ueda Takuya; Nakao Mitsuteru; Sugano Sumio; Gojobori Takashi; Imanishi Tadashi
Low conservation and species-specific evolution of alternative splicing in humans and mice: comparative genomics analysis using well-annotated full-length cDNAs.
Nucleic acids research 2008;36(20):6386-95.
2008: Ohyanagi Hajime; Ikeo Kazuho; Gojobori Takashi
The origin of nucleus: rebuild from the prokaryotic ancestors of ribosome export factors.
Gene 2008;423(2):149-52.
2008: Howe Doug; Costanzo Maria; Fey Petra; Gojobori Takashi; Hannick Linda; Hide Winston; Hill David P; Kania Renate; Schaeffer Mary; St Pierre Susan; Twigger Simon; White Owen; Rhee Seung Yon
Big data: The future of biocuration.
Nature 2008;455(7209):47-50.
2008: David Charles N; Ozbek Suat; Adamczyk Patrizia; Meier Sebastian; Pauly Barbara; Chapman Jarrod; Hwang Jung Shan; Gojobori Takashi; Holstein Thomas W
Evolution of complex structures: minicollagens shape the cnidarian nematocyst.
Trends in genetics : TIG 2008;24(9):431-8.
2008: Hwang Jung Shan; Takaku Yasuharu; Chapman Jarrod; Ikeo Kazuho; David Charles N; Gojobori Takashi
Cilium evolution: identification of a novel protein, nematocilin, in the mechanosensory cilium of Hydra nematocytes.
Molecular biology and evolution 2008;25(9):2009-17.
2008: Ohyanagi Hajime; Ikeo Kazuho; Gojobori Takashi
Eukaryotic nuclear structure explains the evolutionary rate difference of ribosome export factors.
Gene 2008;421(1-2):7-13.
2008: Nakagawa So; Niimura Yoshihito; Gojobori Takashi; Tanaka Hiroshi; Miura Kin-ichiro
Diversity of preferred nucleotide sequences around the translation initiation codon in eukaryote genomes.
Nucleic acids research 2008;36(3):861-71.
2008: Hotta Kohji; Takahashi Hiroki; Satoh Nori; Gojobori Takashi
Brachyury-downstream gene sets in a chordate, Ciona intestinalis: integrating notochord specification, morphogenesis and chordate evolution.
Evolution & development 2008;10(1):37-51.
2008: Sugawara H; Ogasawara O; Okubo K; Gojobori T; Tateno Y
DDBJ with new system and face.
Nucleic acids research 2008;36(Database issue):D22-4.
2008: Yamaguchi-Kabata Yumi; Shimada Makoto K; Hayakawa Yosuke; Minoshima Shinsei; Chakraborty Ranajit; Gojobori Takashi; Imanishi Tadashi
Distribution and effects of nonsense polymorphisms in human genes.
PloS one 2008;3(10):e3393.
2008: Murakami Katsuhiko; Imanishi Tadashi; Gojobori Takashi; Nakai Kenta
Two different classes of co-occurring motif pairs found by a novel visualization method in human promoter regions.
BMC genomics 2008;9():112.
2007: Yuge Kazuya; Ikeo Kazuho; Gojobori Takashi
Evolutionary origin of sex-related genes in the mouse brain.
Gene 2007;406(1-2):108-12.
2007: Hwang Jung Shan; Ohyanagi Hajime; Hayakawa Shiho; Osato Naoki; Nishimiya-Fujisawa Chiemi; Ikeo Kazuho; David Charles N; Fujisawa Toshitaka; Gojobori Takashi
The evolutionary emergence of cell type-specific genes inferred from the gene expression analysis of Hydra.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(37):14735-40.
2007: Tanaka Yasuhito; Hanada Kousuke; Hanabusa Hideji; Kurbanov Fuat; Gojobori Takashi; Mizokami Masashi
Increasing genetic diversity of hepatitis C virus in haemophiliacs with human immunodeficiency virus coinfection.
The Journal of general virology 2007;88(Pt 9):2513-9.
2007: Sakate Ryuichi; Suto Yumiko; Imanishi Tadashi; Tanoue Tetsuya; Hida Munetomo; Hayasaka Ikuo; Kusuda Jun; Gojobori Takashi; Hashimoto Katsuyuki; Hirai Momoki
Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome.
Gene 2007;399(1):1-10.
2007: Hotta Kohji; Mitsuhara Kenta; Takahashi Hiroki; Inaba Kazuo; Oka Kotaro; Gojobori Takashi; Ikeo Kazuho
A web-based interactive developmental table for the ascidian Ciona intestinalis, including 3D real-image embryo reconstructions: I. From fertilized egg to hatching larva.
Developmental dynamics : an official publication of the American Association of Anatomists 2007;236(7):1790-805.
2007: Liu Qing-Xin; Nakashima-Kamimura Naomi; Ikeo Kazuho; Hirose Susumu; Gojobori Takashi
Compensatory change of interacting amino acids in the coevolution of transcriptional coactivator MBF1 and TATA-box-binding protein.
Molecular biology and evolution 2007;24(7):1458-63.
2007: Osato Naoki; Suzuki Yoshiyuki; Ikeo Kazuho; Gojobori Takashi
Transcriptional interferences in cis natural antisense transcripts of humans and mice.
Genetics 2007;176(2):1299-306.
2007: Kubota Ryuji; Hanada Kousuke; Furukawa Yoshitaka; Arimura Kimiyoshi; Osame Mitsuhiro; Gojobori Takashi; Izumo Shuji
Genetic stability of human T lymphotropic virus type I despite antiviral pressures by CTLs.
Journal of immunology (Baltimore, Md. : 1950) 2007;178(9):5966-72.
2007: Hanada Kousuke; Tanaka Yasuhito; Mizokami Masashi; Gojobori Takashi; Alter Harvey J
A reduction in selective immune pressure during the course of chronic hepatitis C correlates with diminished biochemical evidence of hepatic inflammation.
Virology 2007;361(1):27-33.
2007: Sakai Hiroaki; Koyanagi Kanako O; Imanishi Tadashi; Itoh Takeshi; Gojobori Takashi
Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes.
Gene 2007;389(2):196-203.
2007: Homma Keiichi; Fukuchi Satoshi; Nakamura Yoji; Gojobori Takashi; Nishikawa Ken
Gene cluster analysis method identifies horizontally transferred genes with high reliability and indicates that they provide the main mechanism of operon gain in 8 species of gamma-Proteobacteria.
Molecular biology and evolution 2007;24(3):805-13.
2007: Wang Hurng-Yi; Chien Huan-Chieh; Osada Naoki; Hashimoto Katsuyuki; Sugano Sumio; Gojobori Takashi; Chou Chen-Kung; Tsai Shih-Feng; Wu Chung-I; Shen C-K James
Rate of evolution in brain-expressed genes in humans and other primates.
PLoS biology 2007;5(2):e13.
2007: Takeda Jun-ichi; Suzuki Yutaka; Nakao Mitsuteru; Kuroda Tsuyoshi; Sugano Sumio; Gojobori Takashi; Imanishi Tadashi
H-DBAS: alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational.
Nucleic acids research 2007;35(Database issue):D104-9.
2007: Sugawara Hideaki; Abe Takashi; Gojobori Takashi; Tateno Yoshio
DDBJ working on evaluation and classification of bacterial genes in INSDC.
Nucleic acids research 2007;35(Database issue):D13-5.
2007: Gough Craig A; Gojobori Takashi; Imanishi Tadashi
Cancer-related mutations in BRCA1-BRCT cause long-range structural changes in protein-protein binding sites: a molecular dynamics study.
Proteins 2007;66(1):69-86.
2006: Kosuge Takehide; Abe Takashi; Okido Toshihisa; Tanaka Naoto; Hirahata Masaki; Maruyama Yutaka; Mashima Jun; Tomiki Aki; Kurokawa Motoyoshi; Himeno Ryutaro; Fukuchi Satoshi; Miyazaki Satoru; Gojobori Takashi; Tateno Yoshio; Sugawara Hideaki
Exploration and grading of possible genes from 183 bacterial strains by a common protocol to identification of new genes: Gene Trek in Prokaryote Space (GTPS).
DNA research : an international journal for rapid publication of reports on genes and genomes 2006;13(6):245-54.
2006: Hanada Kousuke; Gojobori Takashi; Li Wen-Hsiung
Radical amino acid change versus positive selection in the evolution of viral envelope proteins.
Gene 2006;385():83-8.
2006: Yoshida Kengo; Fujisawa Toshitaka; Hwang Jung Shan; Ikeo Kazuho; Gojobori Takashi
Degeneration after sexual differentiation in hydra and its relevance to the evolution of aging.
Gene 2006;385():64-70.
2006: Makino Takashi; Suzuki Yoshiyuki; Gojobori Takashi
Differential evolutionary rates of duplicated genes in protein interaction network.
Gene 2006;385():57-63.
2006: Yura Kei; Shionyu Masafumi; Hagino Kei; Hijikata Atsushi; Hirashima Yoshinori; Nakahara Taku; Eguchi Tatsuya; Shinoda Kazuki; Yamaguchi Akihiro; Takahashi Ken-Ichi; Itoh Takeshi; Imanishi Tadashi; Gojobori Takashi; Go Mitiko
Alternative splicing in human transcriptome: functional and structural influence on proteins.
Gene 2006;380(2):63-71.
2006: Sakabe Eriko; Tanaka Nobuhiko; Shimozono Naoki; Gojobori Takashi; Fujiwara Shigeki
Effects of U0126 and fibroblast growth factor on gene expression profile in Ciona intestinalis embryos as revealed by microarray analysis.
Development, growth & differentiation 2006;48(6):391-400.
2006: Yamasaki Chisato; Kawashima Hiroaki; Todokoro Fusano; Imamizu Yasuhiro; Ogawa Makoto; Tanino Motohiko; Itoh Takeshi; Gojobori Takashi; Imanishi Tadashi
TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB.
Nucleic acids research 2006;34(Web Server issue):W345-9.
2006: Shiina Takashi; Ota Masao; Shimizu Sayoko; Katsuyama Yoshihiko; Hashimoto Nami; Takasu Miwa; Anzai Tatsuya; Kulski Jerzy K; Kikkawa Eri; Naruse Taeko; Kimura Natsuki; Yanagiya Kazuyo; Watanabe Atsushi; Hosomichi Kazuyoshi; Kohara Sakae; Iwamoto Chie; Umehara Yumi; Meyer Alice; Wanner Valérie; Sano Kazumi; Macquin Cécile; Ikeo Kazuho; Tokunaga Katsushi; Gojobori Takashi; Inoko Hidetoshi; Bahram Seiamak
Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity.
Genetics 2006;173(3):1555-70.
2006: Kobayashi Naoki; Watanabe Masakatsu; Kijimoto Teiya; Fujimura Koji; Nakazawa Masumi; Ikeo Kazuho; Kohara Yuji; Gojobori Takashi; Okada Norihiro
magp4 gene may contribute to the diversification of cichlid morphs and their speciation.
Gene 2006;373():126-33.
2006: Makino Takashi; Gojobori Takashi
The evolutionary rate of a protein is influenced by features of the interacting partners.
Molecular biology and evolution 2006;23(4):784-9.
2006: Choy K W; Wang C C; Ogura A; Lau T K; Rogers M S; Ikeo K; Gojobori T; Tang L Y; Lam D S C; Chung T K H; Pang C P
Molecular characterization of the developmental gene in eyes: through data-mining on integrated transcriptome databases.
Clinical biochemistry 2006;39(3):224-30.
2006: Ohyanagi Hajime; Tanaka Tsuyoshi; Sakai Hiroaki; Shigemoto Yasumasa; Yamaguchi Kaori; Habara Takuya; Fujii Yasuyuki; Antonio Baltazar A; Nagamura Yoshiaki; Imanishi Tadashi; Ikeo Kazuho; Itoh Takeshi; Gojobori Takashi; Sasaki Takuji
The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.
Nucleic acids research 2006;34(Database issue):D741-4.
2006: Okubo Kousaku; Sugawara Hideaki; Gojobori Takashi; Tateno Yoshio
DDBJ in preparation for overview of research activities behind data submissions.
Nucleic acids research 2006;34(Database issue):D6-9.
2006: Noda Akiko Ogura; Ikeo Kazuho; Gojobori Takashi
Comparative genome analyses of nervous system-specific genes.
Gene 2006;365():130-6.
2006: Tanaka Tsuyoshi; Ikeo Kazuho; Gojobori Takashi
Evolution of metabolic networks by gain and loss of enzymatic reaction in eukaryotes.
Gene 2006;365():88-94.
2006: Takeda Jun-ichi; Suzuki Yutaka; Nakao Mitsuteru; Barrero Roberto A; Koyanagi Kanako O; Jin Lihua; Motono Chie; Hata Hiroko; Isogai Takao; Nagai Keiichi; Otsuki Tetsuji; Kuryshev Vladimir; Shionyu Masafumi; Yura Kei; Go Mitiko; Thierry-Mieg Jean; Thierry-Mieg Danielle; Wiemann Stefan; Nomura Nobuo; Sugano Sumio; Gojobori Takashi; Imanishi Tadashi
Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs.
Nucleic acids research 2006;34(14):3917-28.
2005: Tanino Motohiko; Suzuki Yutaka; Imanishi Tadashi; Hishiki Teruyoshi; Okubo Kousaku; Gojobori Takashi; Sugano Sumio
[Human transcriptome]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2005;50(16 Suppl):2059-64.
2005: Yamasaki Chisato; Koyanagi Kanako O; Fujii Yasuyuki; Itoh Takeshi; Barrero Roberto; Tamura Takuro; Yamaguchi-Kabata Yumi; Tanino Motohiko; Takeda Jun-Ichi; Fukuchi Satoshi; Miyazaki Satoru; Nomura Nobuo; Sugano Sumio; Imanishi Tadashi; Gojobori Takashi
Investigation of protein functions through data-mining on integrated human transcriptome database, H-Invitational database (H-InvDB).
Gene 2005;364():99-107.
2005: Fujii Yasuyuki; Itoh Takeshi; Sakate Ryuichi; Koyanagi Kanako O; Matsuya Akihiro; Habara Takuya; Yamaguchi Kaori; Kaneko Yayoi; Gojobori Takashi; Imanishi Tadashi
A web tool for comparative genomics: G-compass.
Gene 2005;364():45-52.
2005: Osada Naoki; Hirata Makoto; Tanuma Reiko; Kusuda Jun; Hida Munetomo; Suzuki Yutaka; Sugano Sumio; Gojobori Takashi; Shen C-K James; Wu Chung-I; Hashimoto Katsuyuki
Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs.
Molecular biology and evolution 2005;22(10):1976-82.
2005: Kijimoto Teiya; Watanabe Masakatsu; Fujimura Koji; Nakazawa Masumi; Murakami Yasunori; Kuratani Shigeru; Kohara Yuji; Gojobori Takashi; Okada Norihiro
cimp1, a novel astacin family metalloproteinase gene from East African cichlids, is differentially expressed between species during growth.
Molecular biology and evolution 2005;22(8):1649-60.
2005: Suzuki Yoshiyuki; Ikeo Kazuho; Gojobori Takashi
[Genome network]
Nippon yakurigaku zasshi. Folia pharmacologica Japonica 2005;126(1):55-9.
2005: Koyanagi Kanako O; Hagiwara Masato; Itoh Takeshi; Gojobori Takashi; Imanishi Tadashi
Comparative genomics of bidirectional gene pairs and its implications for the evolution of a transcriptional regulation system.
Gene 2005;353(2):169-76.
2005: Ogasawara Michihiro; Imanishi Tadashi; Moriwaki Kazuo; Gaudieri Silvana; Tsuda Hiroshi; Hashimoto Hiroshi; Shiroishi Toshihiko; Gojobori Takashi; Koide Tsuyoshi
Length variation of CAG/CAA triplet repeats in 50 genes among 16 inbred mouse strains.
Gene 2005;349():107-19.
2005: Hanada Kousuke; Suzuki Yoshiyuki; Nakane Takashi; Hirose Osamu; Gojobori Takashi
The origin and evolution of porcine reproductive and respiratory syndrome viruses.
Molecular biology and evolution 2005;22(4):1024-31.
2005: Shirai Tomokazu; Nakato Akinori; Izutani Noriyuki; Nagahisa Keisuke; Shioya Suteaki; Kimura Eiichiro; Kawarabayasi Yutaka; Yamagishi Akihiko; Gojobori Takashi; Shimizu Hiroshi
Comparative study of flux redistribution of metabolic pathway in glutamate production by two coryneform bacteria.
Metabolic engineering 2005;7(2):59-69.
2005: Tanaka Tsuyoshi; Tateno Yoshio; Gojobori Takashi
Evolution of vitamin B6 (pyridoxine) metabolism by gain and loss of genes.
Molecular biology and evolution 2005;22(2):243-50.
2005: Ogura Atsushi; Ikeo Kazuho; Gojobori Takashi
Estimation of ancestral gene set of bilaterian animals and its implication to dynamic change of gene content in bilaterian evolution.
Gene 2005;345(1):65-71.
2005: Tanaka Yasuhito; Hanada Kousuke; Orito Etsuro; Akahane Yoshihiro; Chayama Kazuaki; Yoshizawa Hiroshi; Sata Michio; Ohta Nobuo; Miyakawa Yuzo; Gojobori Takashi; Mizokami Masashi
Molecular evolutionary analyses implicate injection treatment for schistosomiasis in the initial hepatitis C epidemics in Japan.
Journal of hepatology 2005;42(1):47-53.
2005: Tanino Motohiko; Debily Marie-Anne; Tamura Takuro; Hishiki Teruyoshi; Ogasawara Osamu; Murakawa Katsuji; Kawamoto Shoko; Itoh Kouichi; Watanabe Shinya; de Souza Sandro José; Imbeaud Sandrine; Graudens Esther; Eveno Eric; Hilton Phillip; Sudo Yukio; Kelso Janet; Ikeo Kazuho; Imanishi Tadashi; Gojobori Takashi; Auffray Charles; Hide Winston; Okubo Kousaku
The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms.
Nucleic acids research 2005;33(Database issue):D567-72.
2005: Tateno Y; Saitou N; Okubo K; Sugawara H; Gojobori T
DDBJ in collaboration with mass-sequencing teams on annotation.
Nucleic acids research 2005;33(Database issue):D25-8.
2004: Okayama Toshitsugu; Ikeo Kazuho; Gojobori Takashi
[Integrated database (2): Data oriented approach to genome network informatics]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2004;49(17 Suppl):2921-7.
2004: Tamura Takuro; Ikeo Kazuho; Gojobori Takashi
[Integrated database (2): Integrated database for the Genome Network Project]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2004;49(17 Suppl):2916-20.
2004: Iwama Hisakazu; Gojobori Takashi
Highly conserved upstream sequences for transcription factor genes and implications for the regulatory network.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(49):17156-61.
2004: Alexopoulos Haris; Böttger Angelika; Fischer Sylvia; Levin Alice; Wolf Alexander; Fujisawa Toshitaka; Hayakawa Shiho; Gojobori Takashi; Davies Jane A; David Charles N; Bacon Jonathan P
Evolution of gap junctions: the missing link?
Current biology : CB 2004;14(20):R879-80.
2004: Komiyama Tomoyoshi; Ikeo Kazuho; Tateno Yoshio; Gojobori Takashi
Japanese domesticated chickens have been derived from Shamo traditional fighting cocks.
Molecular phylogenetics and evolution 2004;33(1):16-21.
2004: Nishio Yousuke; Nakamura Yoji; Usuda Yoshihiro; Sugimoto Shinichi; Matsui Kazuhiko; Kawarabayasi Yutaka; Kikuchi Hisashi; Gojobori Takashi; Ikeo Kazuho
Evolutionary process of amino acid biosynthesis in Corynebacterium at the whole genome level.
Molecular biology and evolution 2004;21(9):1683-91.
2004: Fujii Yasuyuki; Imanishi Tadashi; Gojobori Takashi
[H-Invitational Database: integrated database of human genes]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2004;49(11 Suppl):1937-43.
2004: Ogura Atsushi; Ikeo Kazuho; Gojobori Takashi
Comparative analysis of gene expression for convergent evolution of camera eye between octopus and human.
Genome research 2004;14(8):1555-61.
2004: Mizokami Masashi; Gojobori Takashi; Hanada Kousuke
[Molecular evolutionary analysis of hepatitis C virus--detection of positive selective sites]
Nippon rinsho. Japanese journal of clinical medicine 2004;62 Suppl 7(Pt 1):76-80.
2004: Nakamura Yoji; Itoh Takeshi; Matsuda Hideo; Gojobori Takashi
Biased biological functions of horizontally transferred genes in prokaryotic genomes.
Nature genetics 2004;36(7):760-6.
2004: Hanada Kousuke; Suzuki Yoshiyuki; Gojobori Takashi
A large variation in the rates of synonymous substitution for RNA viruses and its relationship to a diversity of viral infection and transmission modes.
Molecular biology and evolution 2004;21(6):1074-80.
2004: Komiyama Tomoyoshi; Ikeo Kazuho; Gojobori Takashi
The evolutionary origin of long-crowing chicken: its evolutionary relationship with fighting cocks disclosed by the mtDNA sequence analysis.
Gene 2004;333():91-9.
2004: Hwang Jung Shan; Kobayashi Chiyoko; Agata Kiyokazu; Ikeo Kazuho; Gojobori Takashi
Detection of apoptosis during planarian regeneration by the expression of apoptosis-related genes and TUNEL assay.
Gene 2004;333():15-25.
2004: Toyoda Reiko; Kasai Akiko; Sato Shigeru; Wada Shuichi; Saiga Hidetoshi; Ikeo Kazuho; Gojobori Takashi; Numakunai Takaharu; Yamamoto Hiroaki
Pigment cell lineage-specific expression activity of the ascidian tyrosinase-related gene.
Gene 2004;332():61-9.
2004: Wang Chi Chiu; Kadota Mitsutaka; Nishigaki Ryuichi; Kazuki Yasuhiro; Shirayoshi Yasuaki; Rogers Michael Scott; Gojobori Takashi; Ikeo Kazuho; Oshimura Mitsuo
Molecular hierarchy in neurons differentiated from mouse ES cells containing a single human chromosome 21.
Biochemical and biophysical research communications 2004;314(2):335-50.
2004: Andrews T Daniel; Gojobori Takashi
Strong positive selection and recombination drive the antigenic variation of the PilE protein of the human pathogen Neisseria meningitidis.
Genetics 2004;166(1):25-32.
2004: Miyazaki S; Sugawara H; Ikeo K; Gojobori T; Tateno Y
DDBJ in the stream of various biological data.
Nucleic acids research 2004;32(Database issue):D31-4.
2004: Matsumoto Toshiko; Yukawa Wataru; Nozaki Yasuyuki; Nakashige Ryo; Shinya Minori; Makino Satoshi; Yagura Masaru; Ikuta Tomoki; Imanishi Tadashi; Inoko Hidetoshi; Tamiya Gen; Gojobori Takashi
Novel algorithm for automated genotyping of microsatellites.
Nucleic acids research 2004;32(20):6069-77.
2004: Kadota M; Nishigaki R; Wang C C; Toda T; Shirayoshi Y; Inoue T; Gojobori T; Ikeo K; Rogers M S; Oshimura M
Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21 in neuronal differentiation: an in vitro model of Down syndrome.
Neuroscience 2004;129(2):325-35.
2003: Yajima Ichiro; Endo Kosuke; Sato Shigeru; Toyoda Reiko; Wada Hiroshi; Shibahara Shigeki; Numakunai Takaharu; Ikeo Kazuho; Gojobori Takashi; Goding Colin R; Yamamoto Hiroaki
Cloning and functional analysis of ascidian Mitf in vivo: insights into the origin of vertebrate pigment cells.
Mechanisms of development 2003;120(12):1489-504.
2003: Ando Asako; Kawata Hisako; Shigenari Atsuko; Anzai Tatsuya; Ota Masao; Katsuyama Yoshihiko; Sada Masaharu; Goto Rieko; Takeshima Shin-Nosuke; Aida Yoko; Iwanaga Takahiro; Fujimura Nobuyuki; Suzuki Yoshiyuki; Gojobori Takashi; Inoko Hidetoshi
Genetic polymorphism of the swine major histocompatibility complex ( SLA) class I genes, SLA-1, -2 and -3.
Immunogenetics 2003;55(9):583-93.
2003: Itoh Takeshi; Gojobori Takashi
[Large-scale analysis by full-length cDNA sequences]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2003;48(14):1962-7.
2003: Ikeo Kazuho; Ishi-i Jun; Tamura Takurou; Gojobori Takashi; Tateno Yoshio
CIBEX: center for information biology gene expression database.
Comptes rendus biologies 2003;326(10-11):1079-82.
2003: Komiyama Tomoyoshi; Ikeo Kazuho; Gojobori Takashi
Where is the origin of the Japanese gamecocks?
Gene 2003;317(1-2):195-202.
2003: Ota Kinya; Tateno Yoshio; Gojobori Takashi
Highly differentiated and conserved sex chromosome in fish species (Aulopus japonicus: Teleostei, Aulopidae).
Gene 2003;317(1-2):187-93.
2003: Hotta Kohji; Takahashi Hiroki; Ueno Naoto; Gojobori Takashi
A genome-wide survey of the genes for planar polarity signaling or convergent extension-related genes in Ciona intestinalis and phylogenetic comparisons of evolutionary conserved signaling components.
Gene 2003;317(1-2):165-85.
2003: Nakamura Yoji; Nishio Yousuke; Ikeo Kazuho; Gojobori Takashi
The genome stability in Corynebacterium species due to lack of the recombinational repair system.
Gene 2003;317(1-2):149-55.
2003: Niimura Yoshihito; Terabe Mahito; Gojobori Takashi; Miura Kin-ichiro
Comparative analysis of the base biases at the gene terminal portions in seven eukaryote genomes.
Nucleic acids research 2003;31(17):5195-201.
2003: Nishio Yousuke; Nakamura Yoji; Kawarabayasi Yutaka; Usuda Yoshihiro; Kimura Eiichiro; Sugimoto Shinichi; Matsui Kazuhiko; Yamagishi Akihiko; Kikuchi Hisashi; Ikeo Kazuho; Gojobori Takashi
Comparative complete genome sequence analysis of the amino acid replacements responsible for the thermostability of Corynebacterium efficiens.
Genome research 2003;13(7):1572-9.
2003: Ishibashi Tomoko; Nakazawa Masumi; Ono Hiroaki; Satoh Nori; Gojobori Takashi; Fujiwara Shigeki
Microarray analysis of embryonic retinoic acid target genes in the ascidian Ciona intestinalis.
Development, growth & differentiation 2003;45(3):249-59.
2003: Mineta Katsuhiko; Nakazawa Masumi; Cebria Francesc; Ikeo Kazuho; Agata Kiyokazu; Gojobori Takashi
Origin and evolutionary process of the CNS elucidated by comparative genomics analysis of planarian ESTs.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(13):7666-71.
2003: Anzai Tatsuya; Shiina Takashi; Kimura Natsuki; Yanagiya Kazuyo; Kohara Sakae; Shigenari Atsuko; Yamagata Tetsushi; Kulski Jerzy K; Naruse Taeko K; Fujimori Yoshifumi; Fukuzumi Yasuhito; Yamazaki Masaaki; Tashiro Hiroyuki; Iwamoto Chie; Umehara Yumi; Imanishi Tadashi; Meyer Alice; Ikeo Kazuho; Gojobori Takashi; Bahram Seiamak; Inoko Hidetoshi
Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(13):7708-13.
2003: Nakazawa Masumi; Cebrià Francesc; Mineta Katsuhiko; Ikeo Kazuho; Agata Kiyokazu; Gojobori Takashi
Search for the evolutionary origin of a brain: planarian brain characterized by microarray.
Molecular biology and evolution 2003;20(5):784-91.
2003: Nakamura Yoji; Suzuki Yoshiyuki; Gojobori Takashi
[Haemophilus influenzae]
Nippon rinsho. Japanese journal of clinical medicine 2003;61 Suppl 3():716-21.
2003: Miyazaki S; Sugawara H; Gojobori T; Tateno Y
DNA Data Bank of Japan (DDBJ) in XML.
Nucleic acids research 2003;31(1):13-6.
2003: Ohshima Kazuhiko; Hattori Masahira; Yada Tetsusi; Gojobori Takashi; Sakaki Yoshiyuki; Okada Norihiro
Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates.
Genome biology 2003;4(11):R74.
2002: Tanaka Yasuhito; Hanada Kousuke; Mizokami Masashi; Yeo Anthony E T; Shih J Wai-Kuo; Gojobori Takashi; Alter Harvey J
Inaugural Article: A comparison of the molecular clock of hepatitis C virus in the United States and Japan predicts that hepatocellular carcinoma incidence in the United States will increase over the next two decades.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(24):15584-9.
2002: Iwama Hisakazu; Gojobori Takashi
Identification of neurotransmitter receptor genes under significantly relaxed selective constraint by orthologous gene comparisons between humans and rodents.
Molecular biology and evolution 2002;19(11):1891-901.
2002: Cebrià Francesc; Kobayashi Chiyoko; Umesono Yoshihiko; Nakazawa Masumi; Mineta Katsuhiko; Ikeo Kazuho; Gojobori Takashi; Itoh Mari; Taira Masanori; Sánchez Alvarado Alejandro; Agata Kiyokazu
FGFR-related gene nou-darake restricts brain tissues to the head region of planarians.
Nature 2002;419(6907):620-4.
2002: Ogawa Kazuya; Ishihara Shogo; Saito Yumi; Mineta Katsuhiko; Nakazawa Masumi; Ikeo Kazuho; Gojobori Takashi; Watanabe Kenji; Agata Kiyokazu
Induction of a noggin-like gene by ectopic DV interaction during planarian regeneration.
Developmental biology 2002;250(1):59-70.
2002: Elmerot Christian; Arnason Ulfur; Gojobori Takashi; Janke Axel
The mitochondrial genome of the pufferfish, Fugu rubripes, and ordinal teleostean relationships.
Gene 2002;295(2):163-72.
2002: Katayama Kazuhiko; Shirato-Horikoshi Haruko; Kojima Shigeyuki; Kageyama Tsutomu; Oka Tomoichiro; Hoshino Fuminori; Fukushi Shuetsu; Shinohara Michiyo; Uchida Kazue; Suzuki Yoshiyuki; Gojobori Takashi; Takeda Naokazu
Phylogenetic analysis of the complete genome of 18 Norwalk-like viruses.
Virology 2002;299(2):225-239.
2002: Isobe Taku; Yoshino Masayasu; Mizuno Ken-Ichi; Lindahl Kirsten Fischer; Koide Tsuyoshi; Gaudieri Silvana; Gojobori Takashi; Shiroishi Toshihiko
Molecular characterization of the Pb recombination hotspot in the mouse major histocompatibility complex class II region.
Genomics 2002;80(2):229-35.
2002: Cebrià Francesc; Kudome Tomomi; Nakazawa Masumi; Mineta Katsuhiko; Ikeo Kazuho; Gojobori Takashi; Agata Kiyokazu
The expression of neural-specific genes reveals the structural and molecular complexity of the planarian central nervous system.
Mechanisms of development 2002;116(1-2):199-204.
2002: Gojobori Takashi
[Genomic evolution of pathogenic bacteria and horizontal gene transfer]
Nihon Hansenbyo Gakkai zasshi = Japanese journal of leprosy : official organ of the Japanese Leprosy Association 2002;71(2):131-2.
2002: Kunihiro Sumiko; Kawanishi Yuichi; Sano Motoaki; Naito Kimitoshi; Matsuura Yukio; Tateno Yoshio; Gojobori Takashi; Yamagata Youhei; Abe Keietsu; Machida Masayuki
A polymerase chain reaction-based method for cloning novel members of a gene family using a combination of degenerate and inhibitory primers.
Gene 2002;289(1-2):177-84.
2002: Blair Jaime E; Ikeo Kazuho; Gojobori Takashi; Hedges S Blair
The evolutionary position of nematodes.
BMC evolutionary biology 2002;2():7.
2002: Cebrià Francesc; Nakazawa Masumi; Mineta Katsuhiko; Ikeo Kazuho; Gojobori Takashi; Agata Kiyokazu
Dissecting planarian central nervous system regeneration by the expression of neural-specific genes.
Development, growth & differentiation 2002;44(2):135-46.
2002: Akashi Hiroshi; Gojobori Takashi
Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(6):3695-700.
2002: Bernardi Giorgio; Gojobori Takashi; Kreitman Martin
Zuckerkandl Prize.
Journal of molecular evolution 2002;54(2):143.
2002: Niimura Yoshihito; Gojobori Takashi
In silico chromosome staining: reconstruction of Giemsa bands from the whole human genome sequence.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(2):797-802.
2002: Tateno Y; Imanishi T; Miyazaki S; Fukami-Kobayashi K; Saitou N; Sugawara H; Gojobori T
DNA Data Bank of Japan (DDBJ) for genome scale research in life science.
Nucleic acids research 2002;30(1):27-30.
2001: Sato S; Tanaka M; Miura H; Ikeo K; Gojobori T; Takeuchi T; Yamamoto H
Functional conservation of the promoter regions of vertebrate tyrosinase genes.
The journal of investigative dermatology. Symposium proceedings / the Society for Investigative Dermatology, Inc. [and] European Society for Dermatological Research 2001;6(1):10-8.
2001: Suzuki Y; Gojobori T
Positively selected amino acid sites in the entire coding region of hepatitis C virus subtype 1b.
Gene 2001;276(1-2):83-7.
2001: Suzuki Y; Gojobori T; Nei M
ADAPTSITE: detecting natural selection at single amino acid sites.
Bioinformatics (Oxford, England) 2001;17(7):660-1.
2000: Toyoda R; Sato S; Ikeo K; Gojobori T; Numakunai T; Goding C R; Yamamoto H
Pigment cell-specific expression of the tyrosinase gene in ascidians has a different regulatory mechanism from vertebrates.
Gene 2000;259(1-2):159-70.
2000: Ota K; Kobayashi T; Ueno K; Gojobori T
Evolution of heteromorphic sex chromosomes in the order Aulopiformes.
Gene 2000;259(1-2):25-30.
2000: Gaudieri S; Dawkins R L; Habara K; Kulski J K; Gojobori T
SNP profile within the human major histocompatibility complex reveals an extreme and interrupted level of nucleotide diversity.
Genome research 2000;10(10):1579-86.
2000: Yamaguchi-Kabata Y; Gojobori T
Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes.
Journal of virology 2000;74(9):4335-50.
2000: Tateno Y; Miyazaki S; Ota M; Sugawara H; Gojobori T
DNA data bank of Japan (DDBJ) in collaboration with mass sequencing teams.
Nucleic acids research 2000;28(1):24-6.
1999: Suzuki Y; Gojobori T
A method for detecting positive selection at single amino acid sites.
Molecular biology and evolution 1999;16(10):1315-28.
1999: Bellgard M I; Gojobori T
Significant differences between the G+C content of synonymous codons in orthologous genes and the genomic G+C content.
Gene 1999;238(1):33-7.
1999: Sato S; Toyoda R; Katsuyama Y; Saiga H; Numakunai T; Ikeo K; Gojobori T; Yajima I; Yamamoto H
Structure and developmental expression of the ascidian TRP gene: insights into the evolution of pigment cell-specific gene expression.
Developmental dynamics : an official publication of the American Association of Anatomists 1999;215(3):225-37.
1999: Bellgard M I; Itoh T; Watanabe H; Imanishi T; Gojobori T
Dynamic evolution of genomes and the concept of genome space.
Annals of the New York Academy of Sciences 1999;870():293-300.
1999: Takezaki N; Gojobori T
Correct and incorrect vertebrate phylogenies obtained by the entire mitochondrial DNA sequences.
Molecular biology and evolution 1999;16(5):590-601.
1999: Shiina T; Oka A; Imanishi T; Hanzawa K; Gojobori T; Watanabe S; Inoko H
Multiple class I loci expressed by the quail Mhc.
Immunogenetics 1999;49(5):456-60.
1999: Shiina T; Shimizu C; Oka A; Teraoka Y; Imanishi T; Gojobori T; Hanzawa K; Watanabe S; Inoko H
Gene organization of the quail major histocompatibility complex (MhcCoja) class I gene region.
Immunogenetics 1999;49(5):384-94.
1999: Itoh T; Okayama T; Hashimoto H; Takeda J; Davis R W; Mori H; Gojobori T
A low rate of nucleotide changes in Escherichia coli K-12 estimated from a comparison of the genome sequences between two different substrains.
FEBS letters 1999;450(1-2):72-6.
1999: Suzuki Y; Katayama K; Fukushi S; Kageyama T; Oya A; Okamura H; Tanaka Y; Mizokami M; Gojobori T
Slow evolutionary rate of GB virus C/hepatitis G virus.
Journal of molecular evolution 1999;48(4):383-9.
1999: Bellgard M I; Gojobori T
Identification of a ribonuclease H gene in both Mycoplasma genitalium and Mycoplasma pneumoniae by a new method for exhaustive identification of ORFs in the complete genome sequences.
FEBS letters 1999;445(1):6-8.
1999: Sugawara H; Miyazaki S; Gojobori T; Tateno Y
DNA Data Bank of Japan dealing with large-scale data submission.
Nucleic acids research 1999;27(1):25-8.
1998: Tanaka Y; Mizokami M; Orito E; Ohba K; Kato T; Kondo Y; Mboudjeka I; Zekeng L; Kaptue L; Bikandou B; M'Pele P; Takehisa J; Hayami M; Suzuki Y; Gojobori T
African origin of GB virus C/hepatitis G virus.
FEBS letters 1998;423(2):143-8.
1998: Tateno Y; Fukami-Kobayashi K; Miyazaki S; Sugawara H; Gojobori T
DNA Data Bank of Japan at work on genome sequence data.
Nucleic acids research 1998;26(1):16-20.
1998: Okayama T; Tamura T; Gojobori T; Tateno Y; Ikeo K; Miyazaki S; Fukami-Kobayashi K; Sugawara H
Formal design and implementation of an improved DDBJ DNA database with a new schema and object-oriented library.
Bioinformatics (Oxford, England) 1998;14(6):472-8.
1998: Suzuki Y; Gojobori T
The origin and evolution of human T-cell lymphotropic virus types I and II.
Virus genes 1998;16(1):69-84.
1997: Endo T; Imanishi T; Gojobori T; Inoko H
Evolutionary significance of intra-genome duplications on human chromosomes.
Gene 1997;205(1-2):19-27.
1997: Watanabe H; Gojobori T; Miura K;
Bacterial features in the genome of Methanococcus jannaschii in terms of gene composition and biased base composition in ORFs and their surrounding regions.
Gene 1997;205(1-2):7-18.
1997: Suzuki Y; Gojobori T
The origin and evolution of Ebola and Marburg viruses.
Molecular biology and evolution 1997;14(8):800-6.
1997: Sato S; Masuya H; Numakunai T; Satoh N; Ikeo K; Gojobori T; Tamura K; Ide H; Takeuchi T; Yamamoto H
Ascidian tyrosinase gene: its unique structure and expression in the developing brain.
Developmental dynamics : an official publication of the American Association of Anatomists 1997;208(3):363-74.
1997: Yamaguchi Y; Gojobori T
Evolutionary mechanisms and population dynamics of the third variable envelope region of HIV within single hosts.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(4):1264-9.
1997: Tateno Y; Gojobori T
DNA Data Bank of Japan in the age of information biology.
Nucleic acids research 1997;25(1):14-7.
1997: Watanabe H; Gojobori T; Terabe M; Wakiyama M; Miura K
Characteristic distribution of bases and codons around the initiation and termination codons in whole reading frames in bacteria and yeast genomes.
Nucleic acids symposium series 1997;(37):297-8.
1997: Watanabe H; Mori H; Itoh T; Gojobori T
Genome plasticity as a paradigm of eubacteria evolution.
Journal of molecular evolution 1997;44 Suppl 1():S57-64.
1997: Tateno Y; Ikeo K; Imanishi T; Watanabe H; Endo T; Yamaguchi Y; Suzuki Y; Takahashi K; Tsunoyama K; Kawai M; Kawanishi Y; Naitou K; Gojobori T
Evolutionary motif and its biological and structural significance.
Journal of molecular evolution 1997;44 Suppl 1():S38-43.
1997: Mizokami M; Orito E; Ohba K; Ikeo K; Lau J Y; Gojobori T
Constrained evolution with respect to gene overlap of hepatitis B virus.
Journal of molecular evolution 1997;44 Suppl 1():S83-90.
1996: Mizokami M; Gojobori T; Ohba K; Ikeo K; Ge X M; Ohno T; Orito E; Lau J Y
Hepatitis C virus types 7, 8 and 9 should be classified as type 6 subtypes.
Journal of hepatology 1996;24(5):622-4.
1996: Endo T; Ikeo K; Gojobori T
Large-scale search for genes on which positive selection may operate.
Molecular biology and evolution 1996;13(5):685-90.
1996: Ohba K; Mizokami M; Lau J Y; Orito E; Ikeo K; Gojobori T
Evolutionary relationship of hepatitis C, pesti-, flavi-, plantviruses, and newly discovered GB hepatitis agents.
FEBS letters 1996;378(3):232-4.
1995: Ohba K; Mizokami M; Ohno T; Suzuki K; Orito E; Lau J Y; Ina Y; Ikeo K; Gojobori T
Relationships between serotypes and genotypes of hepatitis B virus: genetic classification of HBV by use of surface genes.
Virus research 1995;39(1):25-34.
1995: Ohba K; Mizokami M; Ohno T; Suzuki K; Orito E; Ina Y; Lau J Y; Gojobori T
Classification of hepatitis C virus into major types and subtypes based on molecular evolutionary analysis.
Virus research 1995;36(2-3):201-14.
1995: Shiina T; Ando A; Imanishi T; Kawata H; Hanzawa K; Gojobori T; Inoko H; Watanabe S
Isolation and characterization of cDNA clones for Japanese quail (Coturnix japonica) major histocompatibility complex (MhcCoja) class I molecules.
Immunogenetics 1995;42(3):213-6.
1994: Mizokami M; Lau J Y; Suzuki K; Nakano T; Gojobori T
Differential sensitivity of hepatitis C virus quasispecies to interferon-alpha therapy.
Journal of hepatology 1994;21(5):884-6.
1994: Gojobori T; Yamaguchi Y; Ikeo K; Mizokami M
Evolution of pathogenic viruses with special reference to the rates of synonymous and nonsynonymous substitutions.
Idengaku zasshi 1994;69(5):481-8.
1994: Ina Y; Gojobori T
Statistical analysis of nucleotide sequences of the hemagglutinin gene of human influenza A viruses.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(18):8388-92.
1992: Wada K; Wada Y; Ishibashi F; Gojobori T; Ikemura T
Codon usage tabulated from the GenBank genetic sequence data.
Nucleic acids research 1992;20 Suppl():2111-8.
1992: Moriyama E N; Gojobori T
Rates of synonymous substitution and base composition of nuclear genes in Drosophila.
Genetics 1992;130(4):855-64.
1991: Moriyama E N; Ina Y; Ikeo K; Shimizu N; Gojobori T
Mutation pattern of human immunodeficiency virus gene.
Journal of molecular evolution 1991;32(5):360-3.
1991: Wada K; Wada Y; Doi H; Ishibashi F; Gojobori T; Ikemura T
Codon usage tabulated from the GenBank genetic sequence data.
Nucleic acids research 1991;19 Suppl():1981-6.
1990: Gojobori T; Moriyama E N; Kimura M
Molecular clock of viral evolution, and the neutral theory.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(24):10015-8.
1990: Ina Y; Gojobori T
Molecular evolution of human T-cell leukemia virus.
Journal of molecular evolution 1990;31(6):493-9.
1990: Gojobori T; Moriyama E N; Ina Y; Ikeo K; Miura T; Tsujimoto H; Hayami M; Yokoyama S
Evolutionary origin of human and simian immunodeficiency viruses.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(11):4108-11.
1990: Wada K; Aota S; Tsuchiya R; Ishibashi F; Gojobori T; Ikemura T
Codon usage tabulated from the GenBank genetic sequence data.
Nucleic acids research 1990;18 Suppl():2367-411.
1989: Orito E; Mizokami M; Ina Y; Moriyama E N; Kameshima N; Yamamoto M; Gojobori T
Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences.
Proceedings of the National Academy of Sciences of the United States of America 1989;86(18):7059-62.
1989: Moriyama E N; Gojobori T
Evolution of nested genes with special reference to cuticle proteins in Drosophila melanogaster.
Journal of molecular evolution 1989;28(5):391-7.
1988: Aota S; Gojobori T; Ishibashi F; Maruyama T; Ikemura T
Codon usage tabulated from the GenBank Genetic Sequence Data.
Nucleic acids research 1988;16 Suppl():r315-402.
1987: Gojobori T; Yokoyama S
Molecular evolutionary rates of oncogenes.
Journal of molecular evolution 1987;26(1-2):148-56.
1987: Aota S; Gojobori T; Shigesada K; Ozeki H; Ikemura T
Nucleotide sequence and molecular evolution of mouse retrovirus-like IAP elements.
Gene 1987;56(1):1-12.
1986: Maruyama T; Gojobori T; Aota S; Ikemura T
Codon usage tabulated from the GenBank genetic sequence data.
Nucleic acids research 1986;14 Suppl():r151-97.

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