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Richard Gourse
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43
Ross, Wilma
37
Gaal, Tamas
9
Schneider, David
7
Aiyar, Sarah
5
Barker, Melanie
5
Estrem, ST
5
Johnson, Reid
5
Murray, Heath
5
Paul, Brian
5
Bartlett, Michael
4
Ebright, Richard
3
Busby, Stephen
3
McLeod, Sarah
3
Kainz, M
3
Hirvonen, Christine
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All Publications
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2009: Lennon Christopher W; Gaal Tamas; Ross Wilma; Gourse Richard L
Escherichia coli DksA binds to Free RNA polymerase with higher affinity than to RNA polymerase in an open complex.
Journal of bacteriology 2009;191(18):5854-8.
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2009: Blankschien Matthew D; Lee Jeong-Hyun; Grace Elicia D; Lennon Christopher W; Halliday Jennifer A; Ross Wilma; Gourse Richard L; Herman Christophe
Super DksAs: substitutions in DksA enhancing its effects on transcription initiation.
The EMBO journal 2009;28(12):1720-31.
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2009: Rutherford Steven T; Villers Courtney L; Lee Jeong-Hyun; Ross Wilma; Gourse Richard L
Allosteric control of Escherichia coli rRNA promoter complexes by DksA.
Genes & development 2009;23(2):236-48.
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2008: Lamour Valerie; Rutherford Steven T; Kuznedelov Konstantin; Ramagopal Udupi A; Gourse Richard L; Severinov Konstantin; Darst Seth A
Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein.
Journal of molecular biology 2008;383(2):367-79.
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2008: Haugen Shanil P; Ross Wilma; Gourse Richard L
Advances in bacterial promoter recognition and its control by factors that do not bind DNA.
Nature reviews. Microbiology 2008;6(7):507-19.
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2008: Haugen Shanil P; Ross Wilma; Manrique Michele; Gourse Richard L
Fine structure of the promoter-sigma region 1.2 interaction.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(9):3292-7.
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2008: Vrentas Catherine E; Gaal Tamas; Berkmen Melanie B; Rutherford Steven T; Haugen Shanil P; Vassylyev Dmitry G; Ross Wilma; Gourse Richard L
Still looking for the magic spot: the crystallographically defined binding site for ppGpp on RNA polymerase is unlikely to be responsible for rRNA transcription regulation.
Journal of molecular biology 2008;377(2):551-64.
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2008: Costanzo Alessandra; Nicoloff Herve; Barchinger Sarah E; Banta Amy B; Gourse Richard L; Ades Sarah E
ppGpp and DksA likely regulate the activity of the extracytoplasmic stress factor sigmaE in Escherichia coli by both direct and indirect mechanisms.
Molecular microbiology 2008;67(3):619-32.
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2007: Suthers Patrick F; Gourse Richard L; Yin John
Rapid responses of ribosomal RNA synthesis to nutrient shifts.
Biotechnology and bioengineering 2007;97(5):1230-45.
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2007: Gourse Richard L; Keck James L
Magic spots cast a spell on DNA primase.
Cell 2007;128(5):823-4.
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2007: Rutherford Steven T; Lemke Justin J; Vrentas Catherine E; Gaal Tamas; Ross Wilma; Gourse Richard L
Effects of DksA, GreA, and GreB on transcription initiation: insights into the mechanisms of factors that bind in the secondary channel of RNA polymerase.
Journal of molecular biology 2007;366(4):1243-57.
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2006: Quinones Mariam; Kimsey Harvey H; Ross Wilma; Gourse Richard L; Waldor Matthew K
LexA represses CTXphi transcription by blocking access of the alpha C-terminal domain of RNA polymerase to promoter DNA.
The Journal of biological chemistry 2006;281(51):39407-12.
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2006: Gaal Tamas; Mandel Mark J; Silhavy Thomas J; Gourse Richard L
Crl facilitates RNA polymerase holoenzyme formation.
Journal of bacteriology 2006;188(22):7966-70.
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2006: Mallik Prabhat; Paul Brian J; Rutherford Steven T; Gourse Richard L; Osuna Robert
DksA is required for growth phase-dependent regulation, growth rate-dependent control, and stringent control of fis expression in Escherichia coli.
Journal of bacteriology 2006;188(16):5775-82.
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2006: Gourse Richard L; Ross Wilma; Rutherford Steven T
General pathway for turning on promoters transcribed by RNA polymerases containing alternative sigma factors.
Journal of bacteriology 2006;188(13):4589-91.
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2006: Haugen Shanil P; Berkmen Melanie B; Ross Wilma; Gaal Tamas; Ward Christopher; Gourse Richard L
rRNA promoter regulation by nonoptimal binding of sigma region 1.2: an additional recognition element for RNA polymerase.
Cell 2006;125(6):1069-82.
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2005: Vrentas Catherine E; Gaal Tamas; Ross Wilma; Ebright Richard H; Gourse Richard L
Response of RNA polymerase to ppGpp: requirement for the omega subunit and relief of this requirement by DksA.
Genes & development 2005;19(19):2378-87.
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2005: Paul Brian J; Berkmen Melanie B; Gourse Richard L
DksA potentiates direct activation of amino acid promoters by ppGpp.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(22):7823-8.
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2005: Ross Wilma; Gourse Richard L
Sequence-independent upstream DNA-alphaCTD interactions strongly stimulate Escherichia coli RNA polymerase-lacUV5 promoter association.
Proceedings of the National Academy of Sciences of the United States of America 2005;102(2):291-6.
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2004: Krásný Libor; Gourse Richard L
An alternative strategy for bacterial ribosome synthesis: Bacillus subtilis rRNA transcription regulation.
The EMBO journal 2004;23(22):4473-83.
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2004: Paul Brian J; Barker Melanie M; Ross Wilma; Schneider David A; Webb Cathy; Foster John W; Gourse Richard L
DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP.
Cell 2004;118(3):311-22.
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2004: Murray Heath D; Gourse Richard L
Unique roles of the rrn P2 rRNA promoters in Escherichia coli.
Molecular microbiology 2004;52(5):1375-87.
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2004: Schneider David A; Gourse Richard L
Relationship between growth rate and ATP concentration in Escherichia coli: a bioassay for available cellular ATP.
The Journal of biological chemistry 2004;279(9):8262-8.
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2004: Paul Brian J; Ross Wilma; Gaal Tamas; Gourse Richard L
rRNA transcription in Escherichia coli.
Annual review of genetics 2004;38():749-70.
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2003: Stokes Neil R; Murray Heath D; Subramaniam Chandrasekaran; Gourse Richard L; Louis Petra; Bartlett Wendy; Miller Samantha; Booth Ian R
A role for mechanosensitive channels in survival of stationary phase: regulation of channel expression by RpoS.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(26):15959-64.
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2003: Schneider David A; Gourse Richard L
Changes in the concentrations of guanosine 5'-diphosphate 3'-diphosphate and the initiating nucleoside triphosphate account for inhibition of rRNA transcription in fructose-1,6-diphosphate aldolase (fda) mutants.
Journal of bacteriology 2003;185(20):6192-4.
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2003: Schneider David A; Gourse Richard L
Changes in Escherichia coli rRNA promoter activity correlate with changes in initiating nucleoside triphosphate and guanosine 5' diphosphate 3'-diphosphate concentrations after induction of feedback control of ribosome synthesis.
Journal of bacteriology 2003;185(20):6185-91.
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2003: Murray Heath D; Schneider David A; Gourse Richard L
Control of rRNA expression by small molecules is dynamic and nonredundant.
Molecular cell 2003;12(1):125-34.
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2003: Ross Wilma; Schneider David A; Paul Brian J; Mertens Aaron; Gourse Richard L
An intersubunit contact stimulating transcription initiation by E coli RNA polymerase: interaction of the alpha C-terminal domain and sigma region 4.
Genes & development 2003;17(10):1293-307.
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2003: Schneider David A; Ross Wilma; Gourse Richard L
Control of rRNA expression in Escherichia coli.
Current opinion in microbiology 2003;6(2):151-6.
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2003: Murray Heath D; Appleman J Alex; Gourse Richard L
Regulation of the Escherichia coli rrnB P2 promoter.
Journal of bacteriology 2003;185(1):28-34.
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2003: Schneider David A; Murray Heath D; Gourse Richard L
Measuring control of transcription initiation by changing concentrations of nucleotides and their derivatives.
Methods in enzymology 2003;370():606-17.
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2002: Peck Melicent C; Gaal Tamas; Fisher Robert F; Gourse Richard L; Long Sharon R
The RNA polymerase alpha subunit from Sinorhizobium meliloti can assemble with RNA polymerase subunits from Escherichia coli and function in basal and activated transcription both in vivo and in vitro.
Journal of bacteriology 2002;184(14):3808-14.
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2002: Schneider David A; Gaal Tamas; Gourse Richard L
NTP-sensing by rRNA promoters in Escherichia coli is direct.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(13):8602-7.
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2002: Savery Nigel J; Lloyd Georgina S; Busby Stephen J W; Thomas Mark S; Ebright Richard H; Gourse Richard L
Determinants of the C-terminal domain of the Escherichia coli RNA polymerase alpha subunit important for transcription at class I cyclic AMP receptor protein-dependent promoters.
Journal of bacteriology 2002;184(8):2273-80.
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2002: Aiyar Sarah E; Gaal Tamas; Gourse Richard L
rRNA promoter activity in the fast-growing bacterium Vibrio natriegens.
Journal of bacteriology 2002;184(5):1349-58.
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2002: McLeod Sarah M; Aiyar Sarah E; Gourse Richard L; Johnson Reid C
The C-terminal domains of the RNA polymerase alpha subunits: contact site with Fis and localization during co-activation with CRP at the Escherichia coli proP P2 promoter.
Journal of molecular biology 2002;316(3):517-29.
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2002: Aiyar Sarah E; McLeod Sarah M; Ross Wilma; Hirvonen Christine A; Thomas Mark S; Johnson Reid C; Gourse Richard L
Architecture of Fis-activated transcription complexes at the Escherichia coli rrnB P1 and rrnE P1 promoters.
Journal of molecular biology 2002;316(3):501-16.
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2001: Gaal T; Ross W; Estrem S T; Nguyen L H; Burgess R R; Gourse R L
Promoter recognition and discrimination by EsigmaS RNA polymerase.
Molecular microbiology 2001;42(4):939-54.
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2001: Barker M M; Gourse R L
Regulation of rRNA transcription correlates with nucleoside triphosphate sensing.
Journal of bacteriology 2001;183(21):6315-23.
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2001: Hirvonen C A; Ross W; Wozniak C E; Marasco E; Anthony J R; Aiyar S E; Newburn V H; Gourse R L
Contributions of UP elements and the transcription factor FIS to expression from the seven rrn P1 promoters in Escherichia coli.
Journal of bacteriology 2001;183(21):6305-14.
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2001: Meng W; Belyaeva T; Savery N J; Busby S J; Ross W E; Gaal T; Gourse R L; Thomas M S
UP element-dependent transcription at the Escherichia coli rrnB P1 promoter: positional requirements and role of the RNA polymerase alpha subunit linker.
Nucleic acids research 2001;29(20):4166-78.
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2001: Ross W; Ernst A; Gourse R L
Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groove.
Genes & development 2001;15(5):491-506.
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2001: Barker M M; Gaal T; Gourse R L
Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.
Journal of molecular biology 2001;305(4):689-702.
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2001: Barker M M; Gaal T; Josaitis C A; Gourse R L
Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro.
Journal of molecular biology 2001;305(4):673-88.
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2000: Gourse R L; Ross W; Gaal T
UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition.
Molecular microbiology 2000;37(4):687-95.
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2000: Bartlett M S; Gaal T; Ross W; Gourse R L
Regulation of rRNA transcription is remarkably robust: FIS compensates for altered nucleoside triphosphate sensing by mutant RNA polymerases at Escherichia coli rrn P1 promoters.
Journal of bacteriology 2000;182(7):1969-77.
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1999: McLeod S M; Xu J; Cramton S E; Gaal T; Gourse R L; Johnson R C
Localization of amino acids required for Fis to function as a class II transcriptional activator at the RpoS-dependent proP P2 promoter.
Journal of molecular biology 1999;294(2):333-46.
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1999: Estrem S T; Ross W; Gaal T; Chen Z W; Niu W; Ebright R H; Gourse R L
Bacterial promoter architecture: subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase alpha subunit.
Genes & development 1999;13(16):2134-47.
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1999: Ross W; Salomon J; Holmes W M; Gourse R L
Activation of Escherichia coli leuV transcription by FIS.
Journal of bacteriology 1999;181(12):3864-8.
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1999: He Y; Gaal T; Karls R; Donohue T J; Gourse R L; Roberts G P
Transcription activation by CooA, the CO-sensing factor from Rhodospirillum rubrum. The interaction between CooA and the C-terminal domain of the alpha subunit of RNA polymerase.
The Journal of biological chemistry 1999;274(16):10840-5.
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1998: Kainz M; Gourse R L
The C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase is required for efficient rho-dependent transcription termination.
Journal of molecular biology 1998;284(5):1379-90.
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1998: Aiyar S E; Gourse R L; Ross W
Upstream A-tracts increase bacterial promoter activity through interactions with the RNA polymerase alpha subunit.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(25):14652-7.
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1998: Ross W; Aiyar S E; Salomon J; Gourse R L
Escherichia coli promoters with UP elements of different strengths: modular structure of bacterial promoters.
Journal of bacteriology 1998;180(20):5375-83.
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1998: Estrem S T; Gaal T; Ross W; Gourse R L
Identification of an UP element consensus sequence for bacterial promoters.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(17):9761-6.
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1998: Bartlett M S; Gaal T; Ross W; Gourse R L
RNA polymerase mutants that destabilize RNA polymerase-promoter complexes alter NTP-sensing by rrn P1 promoters.
Journal of molecular biology 1998;279(2):331-45.
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1998: Savery N J; Lloyd G S; Kainz M; Gaal T; Ross W; Ebright R H; Gourse R L; Busby S J
Transcription activation at Class II CRP-dependent promoters: identification of determinants in the C-terminal domain of the RNA polymerase alpha subunit.
The EMBO journal 1998;17(12):3439-47.
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1998: Tan M; Gaal T; Gourse R L; Engel J N
Mutational analysis of the Chlamydia trachomatis rRNA P1 promoter defines four regions important for transcription in vitro.
Journal of bacteriology 1998;180(9):2359-66.
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1998: Appleman J A; Ross W; Salomon J; Gourse R L
Activation of Escherichia coli rRNA transcription by FIS during a growth cycle.
Journal of bacteriology 1998;180(6):1525-32.
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1998: Gourse R L; Gaal T; Aiyar S E; Barker M M; Estrem S T; Hirvonen C A; Ross W
Strength and regulation without transcription factors: lessons from bacterial rRNA promoters.
Cold Spring Harbor symposia on quantitative biology 1998;63():131-9.
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1997: Gaal T; Bartlett M S; Ross W; Turnbough C L; Gourse R L
Transcription regulation by initiating NTP concentration: rRNA synthesis in bacteria.
Science (New York, N.Y.) 1997;278(5346):2092-7.
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1997: Bokal A J; Ross W; Gaal T; Johnson R C; Gourse R L
Molecular anatomy of a transcription activation patch: FIS-RNA polymerase interactions at the Escherichia coli rrnB P1 promoter.
The EMBO journal 1997;16(1):154-62.
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1997: van Ulsen P; Hillebrand M; Kainz M; Collard R; Zulianello L; van de Putte P; Gourse R L; Goosen N
Function of the C-terminal domain of the alpha subunit of Escherichia coli RNA polymerase in basal expression and integration host factor-mediated activation of the early promoter of bacteriophage Mu.
Journal of bacteriology 1997;179(2):530-7.
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1996: Gosink K K; Gaal T; Bokal A J; Gourse R L
A positive control mutant of the transcription activator protein FIS.
Journal of bacteriology 1996;178(17):5182-7.
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1996: Gaal T; Ross W; Blatter E E; Tang H; Jia X; Krishnan V V; Assa-Munt N; Ebright R H; Gourse R L
DNA-binding determinants of the alpha subunit of RNA polymerase: novel DNA-binding domain architecture.
Genes & development 1996;10(1):16-26.
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1996: Gourse R L; Gaal T; Bartlett M S; Appleman J A; Ross W
rRNA transcription and growth rate-dependent regulation of ribosome synthesis in Escherichia coli.
Annual review of microbiology 1996;50():645-77.
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1995: Josaitis C A; Gaal T; Gourse R L
Stringent control and growth-rate-dependent control have nonidentical promoter sequence requirements.
Proceedings of the National Academy of Sciences of the United States of America 1995;92(4):1117-21.
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1995: Bokal A J; Ross W; Gourse R L
The transcriptional activator protein FIS: DNA interactions and cooperative interactions with RNA polymerase at the Escherichia coli rrnB P1 promoter.
Journal of molecular biology 1995;245(3):197-207.
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1994: Bartlett M S; Gourse R L
Growth rate-dependent control of the rrnB P1 core promoter in Escherichia coli.
Journal of bacteriology 1994;176(17):5560-4.
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1994: Gaal T; Rao L; Estrem S T; Yang J; Wartell R M; Gourse R L
Localization of the intrinsically bent DNA region upstream of the E.coli rrnB P1 promoter.
Nucleic acids research 1994;22(12):2344-50.
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1994: Rao L; Ross W; Appleman J A; Gaal T; Leirmo S; Schlax P J; Record M T; Gourse R L
Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength.
Journal of molecular biology 1994;235(5):1421-35.
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1993: Ross W; Gosink K K; Salomon J; Igarashi K; Zou C; Ishihama A; Severinov K; Gourse R L
A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase.
Science (New York, N.Y.) 1993;262(5138):1407-13.
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1993: Borukhov S; Sagitov V; Josaitis C A; Gourse R L; Goldfarb A
Two modes of transcription initiation in vitro at the rrnB P1 promoter of Escherichia coli.
The Journal of biological chemistry 1993;268(31):23477-82.
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1993: Gosink K K; Ross W; Leirmo S; Osuna R; Finkel S E; Johnson R C; Gourse R L
DNA binding and bending are necessary but not sufficient for Fis-dependent activation of rrnB P1.
Journal of bacteriology 1993;175(6):1580-9.
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1993: Newlands J T; Gaal T; Mecsas J; Gourse R L
Transcription of the Escherichia coli rrnB P1 promoter by the heat shock RNA polymerase (E sigma 32) in vitro.
Journal of bacteriology 1993;175(3):661-8.
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1992: Newlands J T; Josaitis C A; Ross W; Gourse R L
Both fis-dependent and factor-independent upstream activation of the rrnB P1 promoter are face of the helix dependent.
Nucleic acids research 1992;20(4):719-26.
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1992: Filutowicz M; Ross W; Wild J; Gourse R L
Involvement of Fis protein in replication of the Escherichia coli chromosome.
Journal of bacteriology 1992;174(2):398-407.
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1991: Singer M; Walter W A; Cali B M; Rouviere P; Liebke H H; Gourse R L; Gross C A
Physiological effects of the fructose-1,6-diphosphate aldolase ts8 mutation on stable RNA synthesis in Escherichia coli.
Journal of bacteriology 1991;173(19):6249-57.
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1991: Leirmo S; Gourse R L
Factor-independent activation of Escherichia coli rRNA transcription. I. Kinetic analysis of the roles of the upstream activator region and supercoiling on transcription of the rrnB P1 promoter in vitro.
Journal of molecular biology 1991;220(3):555-68.
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1991: Newlands J T; Ross W; Gosink K K; Gourse R L
Factor-independent activation of Escherichia coli rRNA transcription. II. characterization of complexes of rrnB P1 promoters containing or lacking the upstream activator region with Escherichia coli RNA polymerase.
Journal of molecular biology 1991;220(3):569-83.
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1990: Ross W; Thompson J F; Newlands J T; Gourse R L
E.coli Fis protein activates ribosomal RNA transcription in vitro and in vivo.
The EMBO journal 1990;9(11):3733-42.
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1990: Josaitis C A; Gaal T; Ross W; Gourse R L
Sequences upstream of the-35 hexamer of rrnB P1 affect promoter strength and upstream activation.
Biochimica et biophysica acta 1990;1050(1-3):307-11.
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1990: Gaal T; Gourse R L
Guanosine 3'-diphosphate 5'-diphosphate is not required for growth rate-dependent control of rRNA synthesis in Escherichia coli.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(14):5533-7.
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1989: Dickson R R; Gaal T; deBoer H A; deHaseth P L; Gourse R L
Identification of promoter mutants defective in growth-rate-dependent regulation of rRNA transcription in Escherichia coli.
Journal of bacteriology 1989;171(9):4862-70.
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1989: Gaal T; Barkei J; Dickson R R; deBoer H A; deHaseth P L; Alavi H; Gourse R L
Saturation mutagenesis of an Escherichia coli rRNA promoter and initial characterization of promoter variants.
Journal of bacteriology 1989;171(9):4852-61.
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1988: Gourse R L
Visualization and quantitative analysis of complex formation between E. coli RNA polymerase and an rRNA promoter in vitro.
Nucleic acids research 1988;16(20):9789-809.
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