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Dmitri Graifer
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63
Karpova, Galina
17
Repkova, Marina
16
Bulygin, Konstantin
15
Ven'iaminova, AG
14
Malygin, Alexey
11
Zenkova, Marina
9
Molotkov, Maxim
9
Ven'yaminova, Aliya
8
Demeshkina, NA
5
Meshchaninova, MI
4
Ivanov, AV
4
Laletina, ES
3
Laletina, Elena
3
Demeshkina, Natalia
2
Favre, Alain
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All Publications
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2009: Babaylova Elena; Graifer Dmitri; Malygin Alexey; Stahl Joachim; Shatsky Ivan; Karpova Galina
Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome.
Nucleic acids research 2009;37(4):1141-51.
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2009: Bulygin Konstantin; Baouz-Drahy Soria; Graifer Dmitri; Favre Alain; Karpova Galina
Sites of 18S rRNA contacting mRNA 3' and 5' of the P site codon in human ribosome: a cross-linking study with mRNAs carrying 4-thiouridines at specific positions.
Biochimica et biophysica acta 2009;1789(3):167-74.
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2009: Babailova E S; Graifer D M; Malygin A A; Shatskii I N; Shtal I; Karpova G G
[Molecular environment of the IIId subdomain of the IRES element of hepatitits C virus RNA on the human 40S ribosomal subunit]
Bioorganicheskaia khimiia 2009;35(1):103-12.
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2008: Bulygin Konstantin; Favre Alain; Baouz-Drahy Soria; Hountondji Codjo; Vorobjev Yury; Ven'yaminova Aliya; Graifer Dmitri; Karpova Galina
Arrangement of 3'-terminus of tRNA on the human ribosome as revealed from cross-linking data.
Biochimie 2008;90(11-12):1624-36.
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2007: Molotkov M V; Graifer D M; Popugaeva E A; Bulygin K N; Meshchaninova M I; Ven'iaminova A G; Karpova G G
[Protein S3 in the human 80S ribosome adjoins mRNA from 3'-side of the A-site codon]
Bioorganicheskaia khimiia 2007;33(4):431-41.
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2006: Molotkov Maxim V; Graifer Dmitri M; Popugaeva Elena A; Bulygin Konstantin N; Meschaninova Maria I; Ven'yaminova Aliya G; Karpova Galina G
mRNA 3' of the A site bound codon is located close to protein S3 on the human 80S ribosome.
RNA biology 2006;3(3):122-9.
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2006: Laletina E S; Graifer D M; Malygin A A; Shatskii I N; Karpova G G
[Molecular environment of the subdomain IIIe loop of the RNA IRES element of hepatitis C virus on the human 40S ribosomal subunit]
Bioorganicheskaia khimiia 2006;32(3):311-9.
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2006: Laletina Elena; Graifer Dmitri; Malygin Alexey; Ivanov Anton; Shatsky Ivan; Karpova Galina
Proteins surrounding hairpin IIIe of the hepatitis C virus internal ribosome entry site on the human 40S ribosomal subunit.
Nucleic acids research 2006;34(7):2027-36.
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2005: Molotkov M V; Graifer D M; Demeshkina N A; Repkova M N; Ven'iaminova A G; Karpova G G
[Positioning of mRNA 3' of the a site bound codon on the human 80S ribosome]
Molekuliarnaia biologiia 2005;39(6):999-1007.
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2005: Molotkov Maxim; Graifer Dmitri; Demeshkna Natalia; Repkova Marina; Ven'yaminova Aliya; Karpova Galina
Arrangement of mRNA 3' of the A site codon on the human 80S ribosome.
RNA biology 2005;2(2):63-9.
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2005: Graifer Dmitri; Molotkov Maxim; Eremina Anna; Ven'yaminova Aliya; Repkova Marina; Karpova Galina
The central part of the 5.8 S rRNA is differently arranged in programmed and free human ribosomes.
The Biochemical journal 2005;387(Pt 1):139-45.
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2004: Molotkov M V; Graifer D M; Eremina A V; Ivanov A V; Laletina E S; Repkova M N; Ven'iaminova A G; Karpova G G
[Part of the matrix on the 5' side from codon in the E-segment is close to protein S26 on the human 80S ribosome]
Molekuliarnaia biologiia 2004;38(6):1033-40.
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2004: Demeshkina N A; Repkova M N; Ven'iaminova A G; Graifer D M; Karpova G G
[The first nucleotide of the codon located in the P site of the 80S ribosome is close to G1702 of the 18S rRNA as revealed by crosslinking to a pUUUGUU derivative containing a perfluorophenylazido group at the guanine]
Molekuliarnaia biologiia 2004;38(3):501-6.
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2004: Molotkov M V; Graifer D M; Meshchaninova M I; Repkova M N; Ven'iaminova A G; Karpova G G
[Protein environment of the sense codon of the template in the A site of the human ribosome as inferred from crosslinking to oligoribonucleotide derivatives]
Molekuliarnaia biologiia 2004;38(3):493-500.
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2004: Graifer Dmitri; Molotkov Maxim; Styazhkina Valentina; Demeshkina Natalia; Bulygin Konstantin; Eremina Anna; Ivanov Anton; Laletina Elena; Ven'yaminova Aliya; Karpova Galina
Variable and conserved elements of human ribosomes surrounding the mRNA at the decoding and upstream sites.
Nucleic acids research 2004;32(11):3282-93.
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2003: Malygin A A; Graifer D M; Laletina E S; Shatskii I N; Karpova G G
[Approach to identifying the functionally important segments of RNA, based on complementation-addressed modification]
Molekuliarnaia biologiia 2003;37(6):1027-34.
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2003: Stiazhkina V A; Molotkov M V; Demeshkina N A; Bulygin K N; Graifer D M; Meshchaninova M I; Repkova M N; Ven'iaminova A G; Karpova G G
[Arrangement of the sense and terminating codons of the template in the A-segment of human ribosomes from photocrosslinking data withe oligonucleotide derivatives]
Molekuliarnaia biologiia 2003;37(6):1019-26.
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2003: Bulygin Konstantin N; A Demeshkina Natalia; Frolova Ludmila Yu; Graifer Dmitri M; Ven'yaminova Aliya G; Kisselev Lev L; Karpova Galina G
The ribosomal A site-bound sense and stop codons are similarly positioned towards the A1823-A1824 dinucleotide of the 18S ribosomal RNA.
FEBS letters 2003;548(1-3):97-102.
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2003: Bulygin K N; Meshchaninova M I; Ven'iaminova A G; Graifer D M; Frolova L Iu; Karpova G G
[Highly conserved region 1816-1831 of the 18S ribosomal RNA is close to the first nucleotide of the A-site codon in elongation and termination of translation]
Molekuliarnaia biologiia 2003;37(3):486-93.
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2003: Demeshkina Natalia; Laletina Elena; Meschaninova Maria; Ven'yaminova Aliya; Graifer Dmitri; Karpova Galina
Positioning of mRNA codons with respect to 18S rRNA at the P and E sites of human ribosome.
Biochimica et biophysica acta 2003;1627(1):39-46.
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2003: Demeshkina N A; Laletina E S; Meshchaninova M I; Repkova M N; Ven'iaminova A G; Graifer D M; Karpova G G
[The mRNA codon environment at the P and E sites of human ribosomes deduced from photo crosslinking with pUUUGUU]
Molekuliarnaia biologiia 2003;37(1):147-55.
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2002: Bulygin Konstantin N; Repkova Marina N; Ven'yaminova Aliya G; Graifer Dmitri M; Karpova Galina G; Frolova Ludmila Yu; Kisselev Lev L
Positioning of the mRNA stop signal with respect to polypeptide chain release factors and ribosomal proteins in 80S ribosomes.
FEBS letters 2002;514(1):96-101.
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2002: Demeshkina N A; Repkova M N; Ven'iaminova A G; Graifer D M; Karpova G G
[Crosslinking of mRNA analog, pUUAGUAUUUAUU derivative with a photoactivated group at the guanosine residue, with human 80S ribosomes]
Molekuliarnaia biologiia 2002;36(1):114-22.
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2001: Graifer D M; Karpova G G
[Structural-functional topography of human ribosomes based on the data from crosslinking with mRNA analogs--oligoribonucleotide derivatives]
Molekuliarnaia biologiia 2001;35(4):584-96.
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2001: Graifer D M; Karpova G G; Knorre D G
Location of template on the human ribosome as revealed from data on cross-linking with reactive mRNA analogs.
Biochemistry. Biokhimii?a 2001;66(6):585-602.
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2000: Demeshkina N; Repkova M; Ven'yaminova A; Graifer D; Karpova G
Nucleotides of 18S rRNA surrounding mRNA codons at the human ribosomal A, P, and E sites: a crosslinking study with mRNA analogs carrying an aryl azide group at either the uracil or the guanine residue.
RNA (New York, N.Y.) 2000;6(12):1727-36.
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2000: Demeshkina N A; Repkova M N; Ven'iaminova A G; Graifer D M; Karpova G G
[An analog of mRNA--a derivative of pUUUGUU with an arylazide group at the guanosine residue, crosslinks with nucleotides A-1823 and A-1824 of rRNA within the human 80S ribosome]
Molekuliarnaia biologiia 2000;34(5):894-8.
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2000: Graifer D M; Demeshkina N A; Bulygin K N; Repkova M N; Ven'iaminova A G; Karpova G G
[Environment of the 5'-terminal nucleotide of the mRNA codon at P and E-sites of the human ribosome: crosslinking with pUUUGUU derivatives, bearing a photoactivated group on the uracil residue or on 5'-phosphate]
Molekuliarnaia biologiia 2000;34(2):270-6.
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1999: Graifer D M; Liakhovich A V; Demeshkina N A; Ivanov A V; Repkova M N; Ven'iaminova A G; Karpova G G
[Photoaffinity modification of human 80S ribosome using an analog of the mRNA-derivative of the hexaribonucleotide pUUUGUU, bearing an arylazide group on the guanine residue]
Molekuliarnaia biologiia 1999;33(2):174-82.
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1998: Smolenskaia I A; Bulygin K N; Graifer D M; Ivanov A V; Ven'iaminova A G; Repkova M N; Karpova G G
[Position of a template in the decoding region from affinity modification of human ribosomes by a photoactivated derivative of the oligoribonucleotide pGUGUUU]
Molekuliarnaia biologiia 1998;32(2):233-41.
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1997: Bulygin K N; Graifer D M; Repkova M N; Smolenskaya I A; Veniyaminova A G; Karpova G G
Nucleotide G-1207 of 18S rRNA is an essential component of the human 80S ribosomal decoding center.
RNA (New York, N.Y.) 1997;3(12):1480-5.
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1997: Bulygin K N; Matasova N B; Graifer D M; Veniyaminova A G; Yamkovoy V I; Stahl J; Karpova G G
Protein environment of mRNA at the decoding site of 80S ribosomes from human placenta as revealed from affinity labeling with mRNA analogs--derivatives of oligoribonucleotides.
Biochimica et biophysica acta 1997;1351(3):325-32.
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1997: Graifer D M; Malygin A A; Matasova N B; Mundus D A; Zenkova M A; Karpova G G
Studying functional significance of the sequence 980-1061 in the central domain of human 18S rRNA using complementary DNA probes.
Biochimica et biophysica acta 1997;1350(3):335-44.
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1997: Smolenskaia I A; Graifer D M; Ivanov A V; Vladimirov S N; Ven'iaminova A G; Repkova M N; Stahl I; Karpova G G
[The protein environment of a template in the decoding region from data on affinity modification of ribosomes from human placenta by an alkylating derivative of the oligoribonucleotide pGUGU3]
Molekuliarnaia biologiia 1997;31(1):144-51.
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1996: Bulygin K N; Matasova N B; Graifer D M; Ven'iaminova A G; Iamkovoi V I; Shtal' I; Karpova G G
[Protein environment of matrices in the decoding region of 80S ribosomes from human placenta from data of affinity modification of mRNA analogs--oligoribonucleotide derivative]
Molekuliarnaia biologiia 1996;30(2):400-9.
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1995: Graifer D M; Zenkova M A; Malygin A A; Matasova N B; Mundus D A; Karpova G G
[Functional value of 980-1061 sequences of human 18S ribosomal RNA using complementary DNA probes]
Molekuliarnaia biologiia 1995;29(1):114-24.
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1994: Malygin A A; Graifer D M; Bulygin K N; Zenkova M A; Yamkovoy V I; Stahl J; Karpova G G
Arrangement of mRNA at the decoding site of human ribosomes. 18S rRNA nucleotides and ribosomal proteins cross-linked to oligouridylate derivatives with alkylating groups at either the 3' or the 5' termini.
European journal of biochemistry / FEBS 1994;226(2):715-23.
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1994: Graifer D M; Juzumiene D I; Karpova G G; Wollenzien P
mRNA binding track in the human 80S ribosome for mRNA analogues randomly substituted with 4-thiouridine residues.
Biochemistry 1994;33(20):6201-6.
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1994: Graifer D M; Juzumiene D I; Wollenzien P; Karpova G G
Cross-linking of mRNA analogues containing 4-thiouridine residues on the 3'- or 5'-side of the coding triplet to the mRNA binding center of the human ribosome.
Biochemistry 1994;33(13):3878-84.
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1992: Graifer D M; Nekhai SYu; Mundus D A; Fedorova O S; Karpova G G
Interaction of human and Escherichia coli tRNA(Phe) with human 80S ribosomes in the presence of oligo- and polyuridylate templates.
Biochimica et biophysica acta 1992;1171(1):56-64.
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1992: Bulygin K N; Graifer D M; Zenkova M A; Malygin A A; Iamkovoi V I; Karpova G G
[Affinity modification of 80S ribosomes from human placenta with mRNA analogs--derivatives of oligouridylates with alkylating groups at the 3'-end]
Molekuliarnaia biologiia 1992;26(4):821-8.
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1992: Karpova G G; Graifer D M; Malygin A A; Mundus D A; Zenkova M A; Mamaev S V
Functional topography of human ribosomes as studied by affinity labeling with reactive mRNA analogs.
Biochimie 1992;74(4):373-80.
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1992: Malygin A A; Graifer D M; Zenkova M A; Mamaev S V; Karpova G G
[Affinity modification of 80S ribosomes from human placenta by derivatives of tri- and hexauridylates as mRNA analogs]
Molekuliarnaia biologiia 1992;26(2):369-77.
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1992: Tujebajeva R M; Graifer D M; Matasova N B; Fedorova O S; Odintsov V B; Ajtkhozhina N A; Karpova G G
Selective inhibition of the polypeptide chain elongation in eukaryotic cells.
Biochimica et biophysica acta 1992;1129(2):177-82.
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1991: Matasova N B; Myltseva S V; Zenkova M A; Graifer D M; Vladimirov S N; Karpova G G
Isolation of ribosomal subunits containing intact rRNA from human placenta: estimation of functional activity of 80S ribosomes.
Analytical biochemistry 1991;198(2):219-23.
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1991: Graifer D M; Zenkova M A; Malygin A A; Mamaev S V; Mundus D A; Karpova G G
[Segments of 18S rRNA, located in the area of the mRNA-binding center of ribosomes from human placenta]
Bioorganicheskaia khimiia 1991;17(1):88-98.
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1990: Graifer D M; Fedorova O S; Karpova G G
Interaction of puromycin with acceptor site of human placenta 80 S ribosomes.
FEBS letters 1990;277(1-2):4-6.
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1990: Graifer D M; Tuebaeva R M; Matasova N B; Fedorova O S; Karpova G G; Aitkhozhina N A
[The effect of Cephalotaxus group alkaloids on elongation of the polypeptide chain in human ribosomes]
Molekuliarnaia biologiia 1990;24(6):1679-85.
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1990: Graifer D M; Zenkova M A; Malygin A A; Mamaev S V; Mundus D A; Karpova G G
Identification of a site on 18 S rRNA of human placenta ribosomes in the region of the mRNA binding center.
Journal of molecular biology 1990;214(1):121-8.
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1990: Graifer D M; Zenkova M A; Karpova G G; Malygin A A; Matasova N B
[Characteristics of nonenzymatic binding of oligoribonucleotides-- analogs of mRNA and Phe-tRNA Phe with 80S ribosomes from human placenta]
Molekuliarnaia biologiia 1990;24(4):1076-83.
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1989: Tujebajeva R M; Graifer D M; Karpova G G; Ajtkhozhina N A
Alkaloid homoharringtonine inhibits polypeptide chain elongation on human ribosomes on the step of peptide bond formation.
FEBS letters 1989;257(2):254-6.
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1989: Graifer D M; Babkina G T; Matasova N B; Vladimirov S N; Karpova G G; Vlassov V V
Structural arrangement of tRNA binding sites on Escherichia coli ribosomes, as revealed from data on affinity labelling with photoactivatable tRNA derivatives.
Biochimica et biophysica acta 1989;1008(2):146-56.
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1989: Chistyakov P G; Venjaminova A G; Vladimirov S N; Graifer D M; Kazakov S A; Karpova G G
Differences in 23 S rRNA-protein neighbourhood in Escherichia coli 70 S ribosomes and 70 S initiation complex. Probing by bifunctional Pt(II)-containing reagent.
FEBS letters 1989;246(1-2):197-201.
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1988: Chistyakov P G; Abdukayumov M N; Veniaminova A G; Vladimirov S N; Graifer D M; Kazakov S A; Karpova G G
rRNA-protein neighbourhood in Escherichia coli 70 S ribosomes and 70 S initiation complex. Probing by bifunctional Pt(II)-containing reagent.
FEBS letters 1988;236(1):246-50.
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1987: Abdukaiumov M; Gimautdinova O I; Graifer D M; Zenkova M A; Karpova G G
[Preparation of Escherichia coli 70S ribosomes labeled with 35S]
Biokhimii?a (Moscow, Russia) 1987;52(9):1411-6.
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1987: Vladimirov S N; Graifer D M; Zenkova M A; Kazakov S A; Karpova G G
[The use of cross-linking platinum reagents in the study of tRNA and mRNA interaction with ribosomes]
Bioorganicheskaia khimiia 1987;13(8):1053-8.
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1986: Gimautdinova O I; Gorn V V; Gorshkova I I; Graifer D M; Karpova G G
[Alkylation of tRNAPhe with 4-(N-2-chloroethyl-N-methylamino) benzyl-5'-phosphamide of d(ATTTTCA)]
Bioorganicheskaia khimiia 1986;12(4):490-8.
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1985: Bausk E V; Graifer D M; Karpova G G
[Study of the photoaffinity modification of Escherichia coli ribosomes near the donor tRNA-binding center]
Molekuliarnaia biologiia 1985;19(2):545-52.
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1985: Vladimirov S N; Graifer D M; Karpova G G; Semenkov YuP; Makhno V I; Kirillov S V
The effect of GTP hydrolysis and transpeptidation on the arrangement of aminoacyl-tRNA at the A-site of Escherichia coli 70 S ribosomes.
FEBS letters 1985;181(2):367-72.
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1984: Babkina G T; Bausk E V; Karpova G G; Matasova N B; Graifer D M
[Photoaffinity modification of Escherichia coli ribosomes near the tRNA-binding centers by tRNAPhe derivatives carrying arylazido groups on guanosine residues]
Molekuliarnaia biologiia 1984;18(5):1306-10.
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1984: Gimautdinova O I; Gorshkova I I; Karpova G G; Kutiavin I V; Graifer D M
[Selective alkylation of G24 residue in tRNAPhe]
Molekuliarnaia biologiia 1984;18(5):1419-23.
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1984: Babkina G T; Bausk E V; Graifer D M; Karpova G G; Matasova N B
The effect of aminoacyl- or peptidyl-tRNA at the A-site on the arrangement of deacylated tRNA at the ribosomal P-site.
FEBS letters 1984;170(2):290-4.
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1983: Babkina G T; Graifer D M; Karpova G G; Matasova N B
Interaction of tRNAPhe with donor and acceptor tRNA-binding sites of Escherichia coli ribosomes.
FEBS letters 1983;153(2):303-6.
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1982: Vladimirov S N; Graifer D M; Karpova G G
The effect of poly(U) on the arrangement of tRNAPhe in donor tRNA-binding site of Escherichia coli ribosomes.
FEBS letters 1982;144(2):332-6.
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1981: Vladimirov S N; Graifer D M; Karpova G G
The proteins of donor tRNA-binding site of Escherichia coli ribosomes.
FEBS letters 1981;135(1):155-8.
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