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Michael Hammer
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Research Profile (preview)
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Network (preview)
26
Karafet, Tatiana
13
Redd, Alan
10
Zegura, Stephen
10
Cox, Murray
9
Garrigan, Daniel
9
Mobasher, Zahra
9
Wilder, Jason
6
Bamshad, Michael
6
Nachman, Michael
5
Quintana-Murci, Lluis
5
Wood, Elizabeth
5
Skorecki, Karl
4
Soodyall, Himla
4
Stover, Daryn
4
Walsh, Bruce
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All Publications
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2009: Hammer Michael F; Behar Doron M; Karafet Tatiana M; Mendez Fernando L; Hallmark Brian; Erez Tamar; Zhivotovsky Lev A; Rosset Saharon; Skorecki Karl
Extended Y chromosome haplotypes resolve multiple and unique lineages of the Jewish priesthood.
Human genetics 2009;126(5):707-17.
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2009: Cox Murray P; Morales David A; Woerner August E; Sozanski Jesse; Wall Jeffrey D; Hammer Michael F
Autosomal resequence data reveal Late Stone Age signals of population expansion in sub-Saharan African foraging and farming populations.
PloS one 2009;4(7):e6366.
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2008: Lansing J Stephen; Watkins Joseph C; Hallmark Brian; Cox Murray P; Karafet Tatiana M; Sudoyo Herawati; Hammer Michael F
Male dominance rarely skews the frequency distribution of Y chromosome haplotypes in human populations.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(33):11645-50.
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2008: Schlecht Joseph; Kaplan Matthew E; Barnard Kobus; Karafet Tatiana; Hammer Michael F; Merchant Nirav C
Machine-learning approaches for classifying haplogroup from Y chromosome STR data.
PLoS computational biology 2008;4(6):e1000093.
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2008: Karafet Tatiana M; Mendez Fernando L; Meilerman Monica B; Underhill Peter A; Zegura Stephen L; Hammer Michael F
New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree.
Genome research 2008;18(5):830-8.
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2008: Pilkington Maya Metni; Wilder Jason A; Mendez Fernando L; Cox Murray P; Woerner August; Angui Thiep; Kingan Sarah; Mobasher Zahra; Batini Chiara; Destro-Bisol Giovanni; Soodyall Himla; Strassmann Beverly I; Hammer Michael F
Contrasting signatures of population growth for mitochondrial DNA and Y chromosomes among human populations in Africa.
Molecular biology and evolution 2008;25(3):517-25.
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2008: Cox Murray P; Mendez Fernando L; Karafet Tatiana M; Pilkington Maya Metni; Kingan Sarah B; Destro-Bisol Giovanni; Strassmann Beverly I; Hammer Michael F
Testing for archaic hominin admixture on the X chromosome: model likelihoods for the modern human RRM2P4 region from summaries of genealogical topology under the structured coalescent.
Genetics 2008;178(1):427-37.
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2008: Garrigan Daniel; Hammer Michael F
Ancient lineages in the genome: a response to Fagundes et al.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(2):E3; author reply E4.
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2008: Walsh Bruce; Redd Alan J; Hammer Michael F
Joint match probabilities for Y chromosomal and autosomal markers.
Forensic science international 2008;174(2-3):234-8.
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2008: Cox Murray P; Woerner August E; Wall Jeffrey D; Hammer Michael F
Intergenic DNA sequences from the human X chromosome reveal high rates of global gene flow.
BMC genetics 2008;9():76.
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2008: Hammer Michael F; Mendez Fernando L; Cox Murray P; Woerner August E; Wall Jeffrey D
Sex-biased evolutionary forces shape genomic patterns of human diversity.
PLoS genetics 2008;4(9):e1000202.
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2007: Garrigan Daniel; Kingan Sarah B; Pilkington Maya M; Wilder Jason A; Cox Murray P; Soodyall Himla; Strassmann Beverly; Destro-Bisol Giovanni; de Knijff Peter; Novelletto Andrea; Friedlaender Jonathan; Hammer Michael F
Inferring human population sizes, divergence times and rates of gene flow from mitochondrial, X and Y chromosome resequencing data.
Genetics 2007;177(4):2195-207.
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2007: Cox Murray P; Redd Alan J; Karafet Tatiana M; Ponder Christine A; Lansing Stephen; Sudoyo Herawati; Hammer Michael F
A Polynesian motif on the Y chromosome: population structure in remote Oceania.
Human biology; an international record of research 2007;79(5):525-35.
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2007: Lansing J Stephen; Cox Murray P; Downey Sean S; Gabler Brandon M; Hallmark Brian; Karafet Tatiana M; Norquest Peter; Schoenfelder John W; Sudoyo Herawati; Watkins Joseph C; Hammer Michael F
Coevolution of languages and genes on the island of Sumba, eastern Indonesia.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(41):16022-6.
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2007: Woerner August E; Cox Murray P; Hammer Michael F
Recombination-filtered genomic datasets by information maximization.
Bioinformatics (Oxford, England) 2007;23(14):1851-3.
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2007: Chaix Raphaëlle; Quintana-Murci Lluís; Hegay Tatyana; Hammer Michael F; Mobasher Zahra; Austerlitz Frédéric; Heyer Evelyne
From social to genetic structures in central Asia.
Current biology : CB 2007;17(1):43-8.
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2006: Hammer Michael F; Chamberlain Veronica F; Kearney Veronica F; Stover Daryn; Zhang Gina; Karafet Tatiana; Walsh Bruce; Redd Alan J
Population structure of Y chromosome SNP haplogroups in the United States and forensic implications for constructing Y chromosome STR databases.
Forensic science international 2006;164(1):45-55.
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2006: Garrigan Daniel; Hammer Michael F
Reconstructing human origins in the genomic era.
Nature reviews. Genetics 2006;7(9):669-80.
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2006: Redd Alan J; Chamberlain Veronica F; Kearney Veronica F; Stover Daryn; Karafet Tatiana; Calderon Karl; Walsh Bruce; Hammer Michael F
Genetic structure among 38 populations from the United States based on 11 U.S. core Y chromosome STRs.
Journal of forensic sciences 2006;51(3):580-5.
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2006: Hammer Michael F; Karafet Tatiana M; Park Hwayong; Omoto Keiichi; Harihara Shinji; Stoneking Mark; Horai Satoshi
Dual origins of the Japanese: common ground for hunter-gatherer and farmer Y chromosomes.
Journal of human genetics 2006;51(1):47-58.
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2005: Saunders Matthew A; Slatkin Montgomery; Garner Chad; Hammer Michael F; Nachman Michael W
The extent of linkage disequilibrium caused by selection on G6PD in humans.
Genetics 2005;171(3):1219-29.
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2005: Wood Elizabeth T; Stover Daryn A; Slatkin Montgomery; Nachman Michael W; Hammer Michael F
The beta -globin recombinational hotspot reduces the effects of strong selection around HbC, a recently arisen mutation providing resistance to malaria.
American journal of human genetics 2005;77(4):637-42.
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2005: Garrigan Daniel; Mobasher Zahra; Kingan Sarah B; Wilder Jason A; Hammer Michael F
Deep haplotype divergence and long-range linkage disequilibrium at xp21.1 provide evidence that humans descend from a structured ancestral population.
Genetics 2005;170(4):1849-56.
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2005: Wood Elizabeth T; Stover Daryn A; Ehret Christopher; Destro-Bisol Giovanni; Spedini Gabriella; McLeod Howard; Louie Leslie; Bamshad Mike; Strassmann Beverly I; Soodyall Himla; Hammer Michael F
Contrasting patterns of Y chromosome and mtDNA variation in Africa: evidence for sex-biased demographic processes.
European journal of human genetics : EJHG 2005;13(7):867-76.
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2005: Karafet Tatiana M; Lansing J S; Redd Alan J; Reznikova Svetlana; Watkins Joseph C; Surata S P K; Arthawiguna W A; Mayer Laura; Bamshad Michael; Jorde Lynn B; Hammer Michael F
Balinese Y-chromosome perspective on the peopling of Indonesia: genetic contributions from pre-neolithic hunter-gatherers, Austronesian farmers, and Indian traders.
Human biology; an international record of research 2005;77(1):93-114.
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2005: Garrigan Daniel; Mobasher Zahra; Severson Tesa; Wilder Jason A; Hammer Michael F
Evidence for archaic Asian ancestry on the human X chromosome.
Molecular biology and evolution 2005;22(2):189-92.
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2004: Wilder Jason A; Hammer Michael F
European ACP1*C allele has recessive deleterious effects on early life viability.
Human biology; an international record of research 2004;76(6):817-35.
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2004: Chaix Raphaëlle; Austerlitz Frédéric; Khegay Tatyana; Jacquesson Svetlana; Hammer Michael F; Heyer Evelyne; Quintana-Murci Lluís
The genetic or mythical ancestry of descent groups: lessons from the Y chromosome.
American journal of human genetics 2004;75(6):1113-6.
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2004: Wilder Jason A; Mobasher Zahra; Hammer Michael F
Genetic evidence for unequal effective population sizes of human females and males.
Molecular biology and evolution 2004;21(11):2047-57.
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2004: Wilder Jason A; Kingan Sarah B; Mobasher Zahra; Pilkington Maya Metni; Hammer Michael F
Global patterns of human mitochondrial DNA and Y-chromosome structure are not influenced by higher migration rates of females versus males.
Nature genetics 2004;36(10):1122-5.
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2004: Hammer Michael F; Garrigan Daniel; Wood Elizabeth; Wilder Jason A; Mobasher Zahra; Bigham Abigail; Krenz James G; Nachman Michael W
Heterogeneous patterns of variation among multiple human x-linked Loci: the possible role of diversity-reducing selection in non-africans.
Genetics 2004;167(4):1841-53.
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2004: Nachman Michael W; D'Agostino Susan L; Tillquist Christopher R; Mobasher Zahra; Hammer Michael F
Nucleotide variation at Msn and Alas2, two genes flanking the centromere of the X chromosome in humans.
Genetics 2004;167(1):423-37.
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2004: Behar Doron M; Hammer Michael F; Garrigan Daniel; Villems Richard; Bonne-Tamir Batsheva; Richards Martin; Gurwitz David; Rosengarten Dror; Kaplan Matthew; Della Pergola Sergio; Quintana-Murci Lluis; Skorecki Karl
MtDNA evidence for a genetic bottleneck in the early history of the Ashkenazi Jewish population.
European journal of human genetics : EJHG 2004;12(5):355-64.
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2004: Behar Doron M; Garrigan Daniel; Kaplan Matthew E; Mobasher Zahra; Rosengarten Dror; Karafet Tatiana M; Quintana-Murci Lluis; Ostrer Harry; Skorecki Karl; Hammer Michael F
Contrasting patterns of Y chromosome variation in Ashkenazi Jewish and host non-Jewish European populations.
Human genetics 2004;114(4):354-65.
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2004: Zegura Stephen L; Karafet Tatiana M; Zhivotovsky Lev A; Hammer Michael F
High-resolution SNPs and microsatellite haplotypes point to a single, recent entry of Native American Y chromosomes into the Americas.
Molecular biology and evolution 2004;21(1):164-75.
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2003: Behar Doron M; Thomas Mark G; Skorecki Karl; Hammer Michael F; Bulygina Ekaterina; Rosengarten Dror; Jones Abigail L; Held Karen; Moses Vivian; Goldstein David; Bradman Neil; Weale Michael E
Multiple origins of Ashkenazi Levites: Y chromosome evidence for both Near Eastern and European ancestries.
American journal of human genetics 2003;73(4):768-79.
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2003: Hammer Michael F; Blackmer Felisa; Garrigan Dan; Nachman Michael W; Wilder Jason A
Human population structure and its effects on sampling Y chromosome sequence variation.
Genetics 2003;164(4):1495-509.
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2003: Bonné-Tamir B; Korostishevsky M; Redd A J; Pel-Or Y; Kaplan M E; Hammer M F
Maternal and paternal lineages of the Samaritan isolate: mutation rates and time to most recent common male ancestor.
Annals of human genetics 2003;67(Pt 2):153-64.
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2003: Yi Zanhua; Garrison Nanibaa'; Cohen-Barak Orit; Karafet Tatiana M; King Richard A; Erickson Robert P; Hammer Michael F; Brilliant Murray H
A 122.5-kilobase deletion of the P gene underlies the high prevalence of oculocutaneous albinism type 2 in the Navajo population.
American journal of human genetics 2003;72(1):62-72.
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2002: Karafet Tatiana M; Osipova Ludmila P; Gubina Marina A; Posukh Olga L; Zegura Stephen L; Hammer Michael F
High levels of Y-chromosome differentiation among native Siberian populations and the genetic signature of a boreal hunter-gatherer way of life.
Human biology; an international record of research 2002;74(6):761-89.
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2002: Saunders Matthew A; Hammer Michael F; Nachman Michael W
Nucleotide variability at G6pd and the signature of malarial selection in humans.
Genetics 2002;162(4):1849-61.
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2002: Redd Alan J; Agellon Al B; Kearney Veronica A; Contreras Veronica A; Karafet Tatiana; Park Hwayong; de Knijff Peter; Butler John M; Hammer Michael F
Forensic value of 14 novel STRs on the human Y chromosome.
Forensic science international 2002;130(2-3):97-111.
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2002: Butler John M; Schoske Richard; Vallone Peter M; Kline Margaret C; Redd Alan J; Hammer Michael F
A novel multiplex for simultaneous amplification of 20 Y chromosome STR markers.
Forensic science international 2002;129(1):10-24.
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2002: Redd Alan J; Roberts-Thomson June; Karafet Tatiana; Bamshad Michael; Jorde Lynn B; Naidu J M; Walsh Bruce; Hammer Michael F
Gene flow from the Indian subcontinent to Australia: evidence from the Y chromosome.
Current biology : CB 2002;12(8):673-7.
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2002: Stone Anne C; Griffiths Robert C; Zegura Stephen L; Hammer Michael F
High levels of Y-chromosome nucleotide diversity in the genus Pan.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(1):43-8.
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2001: Karafet T; Xu L; Du R; Wang W; Feng S; Wells R S; Redd A J; Zegura S L; Hammer M F
Paternal population history of East Asia: sources, patterns, and microevolutionary processes.
American journal of human genetics 2001;69(3):615-28.
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2001: Hammer M F; Karafet T M; Redd A J; Jarjanazi H; Santachiara-Benerecetti S; Soodyall H; Zegura S L
Hierarchical patterns of global human Y-chromosome diversity.
Molecular biology and evolution 2001;18(7):1189-203.
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2001: Bamshad M; Kivisild T; Watkins W S; Dixon M E; Ricker C E; Rao B B; Naidu J M; Prasad B V; Reddy P G; Rasanayagam A; Papiha S S; Villems R; Redd A J; Hammer M F; Nguyen S V; Carroll M L; Batzer M A; Jorde L B
Genetic evidence on the origins of Indian caste populations.
Genome research 2001;11(6):994-1004.
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2001: Gonzalez E; Dhanda R; Bamshad M; Mummidi S; Geevarghese R; Catano G; Anderson S A; Walter E A; Stephan K T; Hammer M F; Mangano A; Sen L; Clark R A; Ahuja S S; Dolan M J; Ahuja S K
Global survey of genetic variation in CCR5, RANTES, and MIP-1alpha: impact on the epidemiology of the HIV-1 pandemic.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(9):5199-204.
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2001: Quintana-Murci L; Krausz C; Zerjal T; Sayar S H; Hammer M F; Mehdi S Q; Ayub Q; Qamar R; Mohyuddin A; Radhakrishna U; Jobling M A; Tyler-Smith C; McElreavey K
Y-chromosome lineages trace diffusion of people and languages in southwestern Asia.
American journal of human genetics 2001;68(2):537-42.
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2000: Hammer M F; Redd A J; Wood E T; Bonner M R; Jarjanazi H; Karafet T; Santachiara-Benerecetti S; Oppenheim A; Jobling M A; Jenkins T; Ostrer H; Bonne-Tamir B
Jewish and Middle Eastern non-Jewish populations share a common pool of Y-chromosome biallelic haplotypes.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(12):6769-74.
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1999: Qamar R; Ayub Q; Khaliq S; Mansoor A; Karafet T; Mehdi S Q; Hammer M F
African and Levantine origins of Pakistani YAP+ Y chromosomes.
Human biology; an international record of research 1999;71(5):745-55.
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1999: Karafet T M; Zegura S L; Posukh O; Osipova L; Bergen A; Long J; Goldman D; Klitz W; Harihara S; de Knijff P; Wiebe V; Griffiths R C; Templeton A R; Hammer M F
Ancestral Asian source(s) of new world Y-chromosome founder haplotypes.
American journal of human genetics 1999;64(3):817-31.
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1998: Karafet T; de Knijff P; Wood E; Ragland J; Clark A; Hammer M F
Different patterns of variation at the X- and Y-chromosome-linked microsatellite loci DXYS156X and DXYS156Y in human populations.
Human biology; an international record of research 1998;70(6):979-92.
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1998: Bamshad M J; Watkins W S; Dixon M E; Jorde L B; Rao B B; Naidu J M; Prasad B V; Rasanayagam A; Hammer M F
Female gene flow stratifies Hindu castes.
Nature 1998;395(6703):651-2.
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1998: Hammer M F; Karafet T; Rasanayagam A; Wood E T; Altheide T K; Jenkins T; Griffiths R C; Templeton A R; Zegura S L
Out of Africa and back again: nested cladistic analysis of human Y chromosome variation.
Molecular biology and evolution 1998;15(4):427-41.
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1998: Bouzekri N; Taylor P G; Hammer M F; Jobling M A
Novel mutation processes in the evolution of a haploid minisatellite, MSY1: array homogenization without homogenization.
Human molecular genetics 1998;7(4):655-9.
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1997: Altheide T K; Hammer M F
Evidence for a possible Asian origin of YAP+ Y chromosomes.
American journal of human genetics 1997;61(2):462-6.
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1997: Karafet T; Zegura S L; Vuturo-Brady J; Posukh O; Osipova L; Wiebe V; Romero F; Long J C; Harihara S; Jin F; Dashnyam B; Gerelsaikhan T; Omoto K; Hammer M F
Y chromosome markers and Trans-Bering Strait dispersals.
American journal of physical anthropology 1997;102(3):301-14.
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1997: Hammer M F; Spurdle A B; Karafet T; Bonner M R; Wood E T; Novelletto A; Malaspina P; Mitchell R J; Horai S; Jenkins T; Zegura S L
The geographic distribution of human Y chromosome variation.
Genetics 1997;145(3):787-805.
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1997: Skorecki K; Selig S; Blazer S; Bradman R; Bradman N; Waburton P J; Ismajlowicz M; Hammer M F
Y chromosomes of Jewish priests.
Nature 1997;385(6611):32.
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1996: Mitchell R J; Hammer M F
Human evolution and the Y chromosome.
Current opinion in genetics & development 1996;6(6):737-42.
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1995: Hammer M F
A recent common ancestry for human Y chromosomes.
Nature 1995;378(6555):376-8.
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1995: Hammer M F; Horai S
Y chromosomal DNA variation and the peopling of Japan.
American journal of human genetics 1995;56(4):951-62.
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1994: Hammer M F
A recent insertion of an alu element on the Y chromosome is a useful marker for human population studies.
Molecular biology and evolution 1994;11(5):749-61.
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1994: Spurdle A B; Woodfield D G; Hammer M F; Jenkins T
The genetic affinity of Polynesians: evidence from Y chromosome polymorphisms.
Annals of human genetics 1994;58(Pt 3):251-63.
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1994: Spurdle A B; Hammer M F; Jenkins T
The Y Alu polymorphism in southern African populations and its relationship to other Y-specific polymorphisms.
American journal of human genetics 1994;54(2):319-30.
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1993: Hammer M F; Silver L M
Phylogenetic analysis of the alpha-globin pseudogene-4 (Hba-ps4) locus in the house mouse species complex reveals a stepwise evolution of t haplotypes.
Molecular biology and evolution 1993;10(5):971-1001.
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