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David Haussler
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33
Kent, James
19
Diekhans, Mark
17
Miller, Webb
13
Baertsch, Robert
13
Siepel, Adam
12
Bejerano, Gill
12
Furey, Terrence
11
Kuhn, Robert
11
Karolchik, Donna
11
Rosenbloom, Kate
10
Roskin, Krishna
9
Hinrichs, Angie
8
Clawson, Hiram
8
Raney, Brian
8
Pedersen, Jan Skov
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All Publications
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2009: Zhu Jingchun; Sanborn J Zachary; Benz Stephen; Szeto Christopher; Hsu Fan; Kuhn Robert M; Karolchik Donna; Archie John; Lenburg Marc E; Esserman Laura J; Kent W James; Haussler David; Wang Ting
The UCSC Cancer Genomics Browser.
Nature methods 2009;6(4):239-40.
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2008: Ma Jian; Ratan Aakrosh; Raney Brian J; Suh Bernard B; Zhang Louxin; Miller Webb; Haussler David
DUPCAR: reconstructing contiguous ancestral regions with duplications.
Journal of computational biology : a journal of computational molecular cell biology 2008;15(8):1007-27.
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2008: Ma Jian; Ratan Aakrosh; Raney Brian J; Suh Bernard B; Miller Webb; Haussler David
The infinite sites model of genome evolution.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(38):14254-61.
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2008: Zweig Ann S; Karolchik Donna; Kuhn Robert M; Haussler David; Kent W James
UCSC genome browser tutorial.
Genomics 2008;92(2):75-84.
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2008: Stanke Mario; Diekhans Mark; Baertsch Robert; Haussler David
Using native and syntenically mapped cDNA alignments to improve de novo gene finding.
Bioinformatics (Oxford, England) 2008;24(5):637-44.
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2008: Zeng Jue; Yan Jizhou; Wang Ting; Mosbrook-Davis Deborah; Dolan Kyle T; Christensen Ryan; Stormo Gary D; Haussler David; Lathrop Richard H; Brachmann Rainer K; Burgess Shawn M
Genome wide screens in yeast to identify potential binding sites and target genes of DNA-binding proteins.
Nucleic acids research 2008;36(1):e8.
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2008: Karolchik D; Kuhn R M; Baertsch R; Barber G P; Clawson H; Diekhans M; Giardine B; Harte R A; Hinrichs A S; Hsu F; Kober K M; Miller W; Pedersen J S; Pohl A; Raney B J; Rhead B; Rosenbloom K R; Smith K E; Stanke M; Thakkapallayil A; Trumbower H; Wang T; Zweig A S; Haussler D; Kent W J
The UCSC Genome Browser Database: 2008 update.
Nucleic acids research 2008;36(Database issue):D773-9.
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2008: Baertsch Robert; Diekhans Mark; Kent W James; Haussler David; Brosius Jürgen
Retrocopy contributions to the evolution of the human genome.
BMC genomics 2008;9():466.
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2008: Rosenbloom Kate; Taylor James; Schaeffer Stephen; Kent Jim; Haussler David; Miller Webb
Phylogenomic resources at the UCSC Genome Browser.
Methods in molecular biology (Clifton, N.J.) 2008;422():133-44.
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2007: Zhu Jingchun; Sanborn J Zachary; Diekhans Mark; Lowe Craig B; Pringle Tom H; Haussler David
Comparative genomics search for losses of long-established genes on the human lineage.
PLoS computational biology 2007;3(12):e247.
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2007: Siepel Adam; Diekhans Mark; Brejová Brona; Langton Laura; Stevens Michael; Comstock Charles L G; Davis Colleen; Ewing Brent; Oommen Shelly; Lau Christopher; Yu Hung-Chun; Li Jianfeng; Roe Bruce A; Green Phil; Gerhard Daniela S; Temple Gary; Haussler David; Brent Michael R
Targeted discovery of novel human exons by comparative genomics.
Genome research 2007;17(12):1763-73.
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2007: Miller Webb; Rosenbloom Kate; Hardison Ross C; Hou Minmei; Taylor James; Raney Brian; Burhans Richard; King David C; Baertsch Robert; Blankenberg Daniel; Kosakovsky Pond Sergei L; Nekrutenko Anton; Giardine Belinda; Harris Robert S; Tyekucheva Svitlana; Diekhans Mark; Pringle Thomas H; Murphy William J; Lesk Arthur; Weinstock George M; Lindblad-Toh Kerstin; Gibbs Richard A; Lander Eric S; Siepel Adam; Haussler David; Kent W James
28-way vertebrate alignment and conservation track in the UCSC Genome Browser.
Genome research 2007;17(12):1797-808.
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2007: Wang Ting; Zeng Jue; Lowe Craig B; Sellers Robert G; Salama Sofie R; Yang Min; Burgess Shawn M; Brachmann Rainer K; Haussler David
Species-specific endogenous retroviruses shape the transcriptional network of the human tumor suppressor protein p53.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(47):18613-8.
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2007: Yeang Chen-Hsiang; Haussler David
Detecting coevolution in and among protein domains.
PLoS computational biology 2007;3(11):e211.
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2007: Dreszer Timothy R; Wall Gregory D; Haussler David; Pollard Katherine S
Biased clustered substitutions in the human genome: the footprints of male-driven biased gene conversion.
Genome research 2007;17(10):1420-30.
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2007: Yeang Chen-Hsiang; Darot Jeremy F J; Noller Harry F; Haussler David
Detecting the coevolution of biosequences--an example of RNA interaction prediction.
Molecular biology and evolution 2007;24(9):2119-31.
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2007: Katzman Sol; Kern Andrew D; Bejerano Gill; Fewell Ginger; Fulton Lucinda; Wilson Richard K; Salama Sofie R; Haussler David
Human genome ultraconserved elements are ultraselected.
Science (New York, N.Y.) 2007;317(5840):915.
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2007: Lowe Craig B; Bejerano Gill; Haussler David
Thousands of human mobile element fragments undergo strong purifying selection near developmental genes.
Proceedings of the National Academy of Sciences of the United States of America 2007;104(19):8005-10.
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2007: Ohlson Johan; Pedersen Jakob Skou; Haussler David; Ohman Marie
Editing modifies the GABA(A) receptor subunit alpha3.
RNA (New York, N.Y.) 2007;13(5):698-703.
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2007: Thomas Daryl J; Rosenbloom Kate R; Clawson Hiram; Hinrichs Angie S; Trumbower Heather; Raney Brian J; Karolchik Donna; Barber Galt P; Harte Rachel A; Hillman-Jackson Jennifer; Kuhn Robert M; Rhead Brooke L; Smith Kayla E; Thakkapallayil Archana; Zweig Ann S; Haussler David; Kent W James
The ENCODE Project at UC Santa Cruz.
Nucleic acids research 2007;35(Database issue):D663-7.
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2007: Thomas Daryl J; Trumbower Heather; Kern Andrew D; Rhead Brooke L; Kuhn Robert M; Haussler David; Kent W James
Variation resources at UC Santa Cruz.
Nucleic acids research 2007;35(Database issue):D716-20.
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2007: Kuhn R M; Karolchik D; Zweig A S; Trumbower H; Thomas D J; Thakkapallayil A; Sugnet C W; Stanke M; Smith K E; Siepel A; Rosenbloom K R; Rhead B; Raney B J; Pohl A; Pedersen J S; Hsu F; Hinrichs A S; Harte R A; Diekhans M; Clawson H; Bejerano G; Barber G P; Baertsch R; Haussler D; Kent W J
The UCSC genome browser database: update 2007.
Nucleic acids research 2007;35(Database issue):D668-73.
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2007: Karolchik Donna; Bejerano Gill; Hinrichs Angie S; Kuhn Robert M; Miller Webb; Rosenbloom Kate R; Zweig Ann S; Haussler David; Kent W James
Comparative genomic analysis using the UCSC genome browser.
Methods in molecular biology (Clifton, N.J.) 2007;395():17-34.
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2006: Ma Jian; Zhang Louxin; Suh Bernard B; Raney Brian J; Burhans Richard C; Kent W James; Blanchette Mathieu; Haussler David; Miller Webb
Reconstructing contiguous regions of an ancestral genome.
Genome research 2006;16(12):1557-65.
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2006: Pollard Katherine S; Salama Sofie R; King Bryan; Kern Andrew D; Dreszer Tim; Katzman Sol; Siepel Adam; Pedersen Jakob S; Bejerano Gill; Baertsch Robert; Rosenbloom Kate R; Kent Jim; Haussler David
Forces shaping the fastest evolving regions in the human genome.
PLoS genetics 2006;2(10):e168.
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2006: Pollard Katherine S; Salama Sofie R; Lambert Nelle; Lambot Marie-Alexandra; Coppens Sandra; Pedersen Jakob S; Katzman Sol; King Bryan; Onodera Courtney; Siepel Adam; Kern Andrew D; Dehay Colette; Igel Haller; Ares Manuel; Vanderhaeghen Pierre; Haussler David
An RNA gene expressed during cortical development evolved rapidly in humans.
Nature 2006;443(7108):167-72.
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2006: Wu Jing; Haussler David
Coding exon detection using comparative sequences.
Journal of computational biology : a journal of computational molecular cell biology 2006;13(6):1148-64.
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2006: Bejerano Gill; Lowe Craig B; Ahituv Nadav; King Bryan; Siepel Adam; Salama Sofie R; Rubin Edward M; Kent W James; Haussler David
A distal enhancer and an ultraconserved exon are derived from a novel retroposon.
Nature 2006;441(7089):87-90.
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2006: Hsu Fan; Kent W James; Clawson Hiram; Kuhn Robert M; Diekhans Mark; Haussler David
The UCSC Known Genes.
Bioinformatics (Oxford, England) 2006;22(9):1036-46.
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2006: Pedersen Jakob Skou; Bejerano Gill; Siepel Adam; Rosenbloom Kate; Lindblad-Toh Kerstin; Lander Eric S; Kent Jim; Miller Webb; Haussler David
Identification and classification of conserved RNA secondary structures in the human genome.
PLoS computational biology 2006;2(4):e33.
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2006: Sugnet Charles W; Srinivasan Karpagam; Clark Tyson A; O'Brien Georgeann; Cline Melissa S; Wang Hui; Williams Alan; Kulp David; Blume John E; Haussler David; Ares Manuel
Unusual intron conservation near tissue-regulated exons found by splicing microarrays.
PLoS computational biology 2006;2(1):e4.
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2006: Hinrichs A S; Karolchik D; Baertsch R; Barber G P; Bejerano G; Clawson H; Diekhans M; Furey T S; Harte R A; Hsu F; Hillman-Jackson J; Kuhn R M; Pedersen J S; Pohl A; Raney B J; Rosenbloom K R; Siepel A; Smith K E; Sugnet C W; Sultan-Qurraie A; Thomas D J; Trumbower H; Weber R J; Weirauch M; Zweig A S; Haussler D; Kent W J
The UCSC Genome Browser Database: update 2006.
Nucleic acids research 2006;34(Database issue):D590-8.
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2005: Lucena Brian; Haussler David
Counterexample to a claim about the reconstruction of ancestral character states.
Systematic biology 2005;54(4):693-5.
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2005: Siepel Adam; Bejerano Gill; Pedersen Jakob S; Hinrichs Angie S; Hou Minmei; Rosenbloom Kate; Clawson Hiram; Spieth John; Hillier Ladeana W; Richards Stephen; Weinstock George M; Wilson Richard K; Gibbs Richard A; Kent W James; Miller Webb; Haussler David
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.
Genome research 2005;15(8):1034-50.
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2005: Bejerano Gill; Siepel Adam C; Kent W James; Haussler David
Computational screening of conserved genomic DNA in search of functional noncoding elements.
Nature methods 2005;2(7):535-45.
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2005: Karchin Rachel; Diekhans Mark; Kelly Libusha; Thomas Daryl J; Pieper Ursula; Eswar Narayanan; Haussler David; Sali Andrej
LS-SNP: large-scale annotation of coding non-synonymous SNPs based on multiple information sources.
Bioinformatics (Oxford, England) 2005;21(12):2814-20.
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2005: Kent W J; Hsu Fan; Karolchik Donna; Kuhn Robert M; Clawson Hiram; Trumbower Heather; Haussler David
Exploring relationships and mining data with the UCSC Gene Sorter.
Genome research 2005;15(5):737-41.
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2005: Robertson Michael P; Igel Haller; Baertsch Robert; Haussler David; Ares Manuel; Scott William G
The structure of a rigorously conserved RNA element within the SARS virus genome.
PLoS biology 2005;3(1):e5.
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2005: Hsu Fan; Pringle Tom H; Kuhn Robert M; Karolchik Donna; Diekhans Mark; Haussler David; Kent W James
The UCSC Proteome Browser.
Nucleic acids research 2005;33(Database issue):D454-8.
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2004: Blanchette Mathieu; Green Eric D; Miller Webb; Haussler David
Reconstructing large regions of an ancestral mammalian genome in silico.
Genome research 2004;14(12):2412-23.
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2004: Furey Terrence S; Diekhans Mark; Lu Yontao; Graves Tina A; Oddy Lachlan; Randall-Maher Jennifer; Hillier LaDeana W; Wilson Richard K; Haussler David
Analysis of human mRNAs with the reference genome sequence reveals potential errors, polymorphisms, and RNA editing.
Genome research 2004;14(10B):2034-40.
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2004: She Xinwei; Horvath Julie E; Jiang Zhaoshi; Liu Ge; Furey Terrence S; Christ Laurie; Clark Royden; Graves Tina; Gulden Cassy L; Alkan Can; Bailey Jeff A; Sahinalp Cenk; Rocchi Mariano; Haussler David; Wilson Richard K; Miller Webb; Schwartz Stuart; Eichler Evan E
The structure and evolution of centromeric transition regions within the human genome.
Nature 2004;430(7002):857-64.
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2004: Jojic Vladimir; Jojic Nebojsa; Meek Chris; Geiger Dan; Siepel Adam; Haussler David; Heckerman D
Efficient approximations for learning phylogenetic HMM models from data.
Bioinformatics (Oxford, England) 2004;20 Suppl 1():i161-8.
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2004: Bejerano Gill; Haussler David; Blanchette Mathieu
Into the heart of darkness: large-scale clustering of human non-coding DNA.
Bioinformatics (Oxford, England) 2004;20 Suppl 1():i40-8.
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2004: Bejerano Gill; Pheasant Michael; Makunin Igor; Stephen Stuart; Kent W James; Mattick John S; Haussler David
Ultraconserved elements in the human genome.
Science (New York, N.Y.) 2004;304(5675):1321-5.
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2004: Blanchette Mathieu; Kent W James; Riemer Cathy; Elnitski Laura; Smit Arian F A; Roskin Krishna M; Baertsch Robert; Rosenbloom Kate; Clawson Hiram; Green Eric D; Haussler David; Miller Webb
Aligning multiple genomic sequences with the threaded blockset aligner.
Genome research 2004;14(4):708-15.
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2004: Jensen-Seaman Michael I; Furey Terrence S; Payseur Bret A; Lu Yontao; Roskin Krishna M; Chen Chin-Fu; Thomas Michael A; Haussler David; Jacob Howard J
Comparative recombination rates in the rat, mouse, and human genomes.
Genome research 2004;14(4):528-38.
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2004: Yang Shan; Smit Arian F; Schwartz Scott; Chiaromonte Francesca; Roskin Krishna M; Haussler David; Miller Webb; Hardison Ross C
Patterns of insertions and their covariation with substitutions in the rat, mouse, and human genomes.
Genome research 2004;14(4):517-27.
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2004: Siepel Adam; Haussler David
Phylogenetic estimation of context-dependent substitution rates by maximum likelihood.
Molecular biology and evolution 2004;21(3):468-88.
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2004: Karolchik Donna; Hinrichs Angela S; Furey Terrence S; Roskin Krishna M; Sugnet Charles W; Haussler David; Kent W James
The UCSC Table Browser data retrieval tool.
Nucleic acids research 2004;32(Database issue):D493-6.
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2004: Siepel Adam; Haussler David
Combining phylogenetic and hidden Markov models in biosequence analysis.
Journal of computational biology : a journal of computational molecular cell biology 2004;11(2-3):413-28.
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2004: Roskin Krishna M; Diekhans Mark; Haussler David
Score functions for determining regional conservation in two-species local alignments.
Journal of computational biology : a journal of computational molecular cell biology 2004;11(2-3):395-411.
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2004: Bailey Jeffrey A; Baertsch Robert; Kent W James; Haussler David; Eichler Evan E
Hotspots of mammalian chromosomal evolution.
Genome biology 2004;5(4):R23.
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2004: Sugnet C W; Kent W J; Ares M; Haussler D
Transcriptome and genome conservation of alternative splicing events in humans and mice.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2004;():66-77.
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2003: Margulies Elliott H; Blanchette Mathieu; Haussler David; Green Eric D
Identification and characterization of multi-species conserved sequences.
Genome research 2003;13(12):2507-18.
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2003: Kent W James; Baertsch Robert; Hinrichs Angie; Miller Webb; Haussler David
Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(20):11484-9.
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2003: Furey Terrence S; Haussler David
Integration of the cytogenetic map with the draft human genome sequence.
Human molecular genetics 2003;12(9):1037-44.
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2003: Winters-Hilt Stephen; Vercoutere Wenonah; DeGuzman Veronica S; Deamer David; Akeson Mark; Haussler David
Highly accurate classification of Watson-Crick basepairs on termini of single DNA molecules.
Biophysical journal 2003;84(2 Pt 1):967-76.
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2003: Schwartz Scott; Kent W James; Smit Arian; Zhang Zheng; Baertsch Robert; Hardison Ross C; Haussler David; Miller Webb
Human-mouse alignments with BLASTZ.
Genome research 2003;13(1):103-7.
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2003: Hardison Ross C; Roskin Krishna M; Yang Shan; Diekhans Mark; Kent W James; Weber Ryan; Elnitski Laura; Li Jia; O'Connor Michael; Kolbe Diana; Schwartz Scott; Furey Terrence S; Whelan Simon; Goldman Nick; Smit Arian; Miller Webb; Chiaromonte Francesca; Haussler David
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution.
Genome research 2003;13(1):13-26.
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2003: Karolchik D; Baertsch R; Diekhans M; Furey T S; Hinrichs A; Lu Y T; Roskin K M; Schwartz M; Sugnet C W; Thomas D J; Weber R J; Haussler D; Kent W J;
The UCSC Genome Browser Database.
Nucleic acids research 2003;31(1):51-4.
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2003: Hardison R C; Chiaromonte F; Kolbe D; Wang H; Petrykowska H; Elnitski L; Yang S; Giardine B; Zhang Y; Riemer C; Schwartz S; Haussler D; Roskin K M; Weber R J; Diekhans M; Kent W J; Weiss M J; Welch J; Miller W
Global predictions and tests of erythroid regulatory regions.
Cold Spring Harbor symposia on quantitative biology 2003;68():335-44.
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2003: Chiaromonte F; Weber R J; Roskin K M; Diekhans M; Kent W J; Haussler D
The share of human genomic DNA under selection estimated from human-mouse genomic alignments.
Cold Spring Harbor symposia on quantitative biology 2003;68():245-54.
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2003: Wang Hui; Hubbell Earl; Hu Jing-shan; Mei Gangwu; Cline Melissa; Lu Gang; Clark Tyson; Siani-Rose Michael A; Ares Manuel; Kulp David C; Haussler David
Gene structure-based splice variant deconvolution using a microarray platform.
Bioinformatics (Oxford, England) 2003;19 Suppl 1():i315-22.
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2002: Cline Melissa S; Karplus Kevin; Lathrop Richard H; Smith Temple F; Rogers Robert G; Haussler David
Information-theoretic dissection of pairwise contact potentials.
Proteins 2002;49(1):7-14.
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2002: Kent W James; Sugnet Charles W; Furey Terrence S; Roskin Krishna M; Pringle Tom H; Zahler Alan M; Haussler David
The human genome browser at UCSC.
Genome research 2002;12(6):996-1006.
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2002: Karchin Rachel; Karplus Kevin; Haussler David
Classifying G-protein coupled receptors with support vector machines.
Bioinformatics (Oxford, England) 2002;18(1):147-59.
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2001: Kent W J; Haussler D
Assembly of the working draft of the human genome with GigAssembler.
Genome research 2001;11(9):1541-8.
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2001: Vercoutere W; Winters-Hilt S; Olsen H; Deamer D; Haussler D; Akeson M
Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel.
Nature biotechnology 2001;19(3):248-52.
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2001: Pavlidis P; Furey T S; Liberto M; Haussler D; Grundy W N
Promoter region-based classification of genes.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 2001;():151-63.
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2000: Furey T S; Cristianini N; Duffy N; Bednarski D W; Schummer M; Haussler D
Support vector machine classification and validation of cancer tissue samples using microarray expression data.
Bioinformatics (Oxford, England) 2000;16(10):906-14.
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2000: Reese M G; Kulp D; Tammana H; Haussler D
Genie--gene finding in Drosophila melanogaster.
Genome research 2000;10(4):529-38.
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2000: Jaakkola T; Diekhans M; Haussler D
A discriminative framework for detecting remote protein homologies.
Journal of computational biology : a journal of computational molecular cell biology 2000;7(1-2):95-114.
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2000: Brown M P; Grundy W N; Lin D; Cristianini N; Sugnet C W; Furey T S; Ares M; Haussler D
Knowledge-based analysis of microarray gene expression data by using support vector machines.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(1):262-7.
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1999: Spingola M; Grate L; Haussler D; Ares M
Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae.
RNA (New York, N.Y.) 1999;5(2):221-34.
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1999: Jaakkola T; Diekhans M; Haussler D
Using the Fisher kernel method to detect remote protein homologies.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1999;():149-58.
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1999: Lazareva-Ulitsky B; Haussler D
A probabilistic approach to consensus multiple alignment.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 1999;():150-61.
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1998: Park J; Karplus K; Barrett C; Hughey R; Haussler D; Hubbard T; Chothia C
Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods.
Journal of molecular biology 1998;284(4):1201-10.
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1997: Karplus K; Sjölander K; Barrett C; Cline M; Haussler D; Hughey R; Holm L; Sander C
Predicting protein structure using hidden Markov models.
Proteins 1997;Suppl 1():134-9.
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1997: Kulp D; Haussler D; Reese M G; Eeckman F H
Integrating database homology in a probabilistic gene structure model.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 1997;():232-44.
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1997: Reese M G; Eeckman F H; Kulp D; Haussler D
Improved splice site detection in Genie.
Journal of computational biology : a journal of computational molecular cell biology 1997;4(3):311-23.
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1996: Sjölander K; Karplus K; Brown M; Hughey R; Krogh A; Mian I S; Haussler D
Dirichlet mixtures: a method for improved detection of weak but significant protein sequence homology.
Computer applications in the biosciences : CABIOS 1996;12(4):327-45.
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1996: Gulko B; Haussler D
Using multiple alignments and phylogenetic trees to detect RNA secondary structure.
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 1996;():350-67.
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1996: Kulp D; Haussler D; Reese M G; Eeckman F H
A generalized hidden Markov model for the recognition of human genes in DNA.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1996;4():134-42.
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1994: Krogh A; Mian I S; Haussler D
A hidden Markov model that finds genes in E. coli DNA.
Nucleic acids research 1994;22(22):4768-78.
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1994: Sakakibara Y; Brown M; Hughey R; Mian I S; Sjölander K; Underwood R C; Haussler D
Stochastic context-free grammars for tRNA modeling.
Nucleic acids research 1994;22(23):5112-20.
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1994: Krogh A; Brown M; Mian I S; Sjölander K; Haussler D
Hidden Markov models in computational biology. Applications to protein modeling.
Journal of molecular biology 1994;235(5):1501-31.
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1994: Stormo G D; Haussler D
Optimally parsing a sequence into different classes based on multiple types of evidence.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1994;2():369-75.
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1994: Grate L; Herbster M; Hughey R; Haussler D; Mian I S; Noller H
RNA modeling using Gibbs sampling and stochastic context free grammars.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1994;2():138-46.
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1993: Brown M; Hughey R; Krogh A; Mian I S; Sjölander K; Haussler D
Using Dirichlet mixture priors to derive hidden Markov models for protein families.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1993;1():47-55.
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1986: Clift B; Haussler D; McConnell R; Schneider T D; Stormo G D
Sequence landscapes.
Nucleic acids research 1986;14(1):141-58.
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