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Klaas Hellingwerf

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Chemicals & Drugs

Phenomena

Light

Occupations

Photochemistry

Living Beings

Concepts & Ideas

Physiology

Signal Transduction

Genes & Molecular Sequences

Amino Acid Sequence

Procedures

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Co-Publications
Name
34
Crielaard, Wim
22
van Stokkum, Ivo
20
Hoff, Wouter
19
van Grondelle, Rienk
17
van Der Horst, Michael
15
Kort, Remco
11
van Thor, Jasper
10
Kaptein, Robert
10
Laan, Wouter
10
Boelens, Rolf
9
Klis, Frans
9
Hendriks, Johnny
9
Kennis, John
9
Teixeira de Mattos, Joost
8
Brul, Stanley

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Publications

TOP 3
Bekker M; de Vries S; Ter Beek A; Hellingwerf K J; de Mattos M J Teixeira
Respiration of Escherichia coli can be fully uncoupled via the nonelectrogenic terminal cytochrome bd-II oxidase.
Alexandre Maxime T A; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
Conformational heterogeneity and propagation of structural changes in the LOV2/Jalpha domain from Avena sativa phototropin 1 as recorded by temperature-dependent FTIR spectroscopy.
Alexandre Maxime T A; Domratcheva Tatiana; Bonetti Cosimo; van Wilderen Luuk J G W; van Grondelle Rienk; Groot Marie-Louise; Hellingwerf Klaas J; Kennis John T M
Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.

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All Publications

2009: Bekker M; de Vries S; Ter Beek A; Hellingwerf K J; de Mattos M J Teixeira
Respiration of Escherichia coli can be fully uncoupled via the nonelectrogenic terminal cytochrome bd-II oxidase.
Journal of bacteriology 2009;191(17):5510-7.
2009: Alexandre Maxime T A; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
Conformational heterogeneity and propagation of structural changes in the LOV2/Jalpha domain from Avena sativa phototropin 1 as recorded by temperature-dependent FTIR spectroscopy.
Biophysical journal 2009;97(1):238-47.
2009: Alexandre Maxime T A; Domratcheva Tatiana; Bonetti Cosimo; van Wilderen Luuk J G W; van Grondelle Rienk; Groot Marie-Louise; Hellingwerf Klaas J; Kennis John T M
Primary reactions of the LOV2 domain of phototropin studied with ultrafast mid-infrared spectroscopy and quantum chemistry.
Biophysical journal 2009;97(1):227-37.
2009: Kramer Gertjan; Sprenger Richard R; Back JaapWillem; Dekker Henk L; Nessen Merel A; van Maarseveen Jan H; de Koning Leo J; Hellingwerf Klaas J; de Jong Luitzen; de Koster Chris G
Identification and quantitation of newly synthesized proteins in Escherichia coli by enrichment of azidohomoalanine-labeled peptides with diagonal chromatography.
Molecular & cellular proteomics : MCP 2009;8(7):1599-611.
2009: Angermayr S Andreas; Hellingwerf Klaas J; Lindblad Peter; de Mattos M Joost Teixeira
Energy biotechnology with cyanobacteria.
Current opinion in biotechnology 2009;20(3):257-63.
2009: Hendriks Johnny; Hellingwerf Klaas J
pH Dependence of the photoactive yellow protein photocycle recovery reaction reveals a new late photocycle intermediate with a deprotonated chromophore.
The Journal of biological chemistry 2009;284(8):5277-88.
2009: Hoff Wouter D; van der Horst Michael A; Nudel Clara B; Hellingwerf Klaas J
Prokaryotic phototaxis.
Methods in molecular biology (Clifton, N.J.) 2009;571():25-49.
2008: Alexandre Maxime T A; van Grondelle Rienk; Hellingwerf Klaas J; Robert Bruno; Kennis John T M
Perturbation of the ground-state electronic structure of FMN by the conserved cysteine in phototropin LOV2 domains.
Physical chemistry chemical physics : PCCP 2008;10(44):6693-702.
2008: Toh K C; van Stokkum Ivo H M; Hendriks Johnny; Alexandre Maxime T A; Arents J C; Perez Marcela Avila; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
On the signaling mechanism and the absence of photoreversibility in the AppA BLUF domain.
Biophysical journal 2008;95(1):312-21.
2008: Vreede Jocelyne; Hellingwerf Klaas J; Bolhuis Peter G
Helix formation is a dynamical bottleneck in the recovery reaction of Photoactive Yellow Protein.
Proteins 2008;72(1):136-49.
2008: Rupenyan Alisa; van Stokkum Ivo H M; Arents Jos C; van Grondelle Rienk; Hellingwerf Klaas; Groot Marie Louise
Characterization of the primary photochemistry of proteorhodopsin with femtosecond spectroscopy.
Biophysical journal 2008;94(10):4020-30.
2008: Lee James; Tomchick Diana R; Brautigam Chad A; Machius Mischa; Kort Remco; Hellingwerf Klaas J; Gardner Kevin H
Changes at the KinA PAS-A dimerization interface influence histidine kinase function.
Biochemistry 2008;47(13):4051-64.
2008: Vreede Jocelyne; Hellingwerf Klaas J; Crielaard Wim
TraR auto-inducer enhances protein backbone fluctuations in DNA binding domain.
FEBS letters 2008;582(5):805-9.
2008: Schuurmans Jasper Merijn; Rossell Sergio L; van Tuijl Arjen; Bakker Barbara M; Hellingwerf Klaas J; Teixeira de Mattos Maarten Joost
Effect of hxk2 deletion and HAP4 overexpression on fermentative capacity in Saccharomyces cerevisiae.
FEMS yeast research 2008;8(2):195-203.
2008: Sosinska Grazyna J; de Groot Piet W J; Teixeira de Mattos M Joost; Dekker Henk L; de Koster Chris G; Hellingwerf Klaas J; Klis Frans M
Hypoxic conditions and iron restriction affect the cell-wall proteome of Candida albicans grown under vagina-simulative conditions.
Microbiology (Reading, England) 2008;154(Pt 2):510-20.
2008: Hazra Partha; Inoue Keiichi; Laan Wouter; Hellingwerf Klaas J; Terazima Masahide
Energetics and role of the hydrophobic interaction during photoreaction of the BLUF domain of AppA.
The journal of physical chemistry. B 2008;112(5):1494-501.
2008: Schuurmans J Merijn; Boorsma André; Lascaris Romeo; Hellingwerf Klaas J; Teixeira de Mattos M Joost
Physiological and transcriptional characterization of Saccharomyces cerevisiae strains with modified expression of catabolic regulators.
FEMS yeast research 2008;8(1):26-34.
2007: van der Horst Michael A; Key Jason; Hellingwerf Klaas J
Photosensing in chemotrophic, non-phototrophic bacteria: let there be light sensing too.
Trends in microbiology 2007;15(12):554-62.
2007: Majerus Teresa; Kottke Tilman; Laan Wouter; Hellingwerf Klaas; Heberle Joachim
Time-resolved FT-IR spectroscopy traces signal relay within the blue-light receptor AppA.
Chemphyschem : a European journal of chemical physics and physical chemistry 2007;8(12):1787-9.
2007: Gauden Magdalena; Grinstead Jeffrey S; Laan Wouter; van Stokkum Ivo H M; Avila-Perez Marcela; Toh K C; Boelens Rolf; Kaptein Robert; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
On the role of aromatic side chains in the photoactivation of BLUF domains.
Biochemistry 2007;46(25):7405-15.
2007: Bekker M; Kramer G; Hartog A F; Wagner M J; de Koster C G; Hellingwerf K J; de Mattos M J Teixeira
Changes in the redox state and composition of the quinone pool of Escherichia coli during aerobic batch-culture growth.
Microbiology (Reading, England) 2007;153(Pt 6):1974-80.
2007: van der Horst Michael A; Arents Jos C; Kort Remco; Hellingwerf Klaas J
Binding, tuning and mechanical function of the 4-hydroxy-cinnamic acid chromophore in photoactive yellow protein.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2007;6(5):571-9.
2007: Alexandre Maxime T A; Arents Jos C; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
A base-catalyzed mechanism for dark state recovery in the Avena sativa phototropin-1 LOV2 domain.
Biochemistry 2007;46(11):3129-37.
2006: Grinstead Jeffrey S; Avila-Perez Marcela; Hellingwerf Klaas J; Boelens Rolf; Kaptein Robert
Light-induced flipping of a conserved glutamine sidechain and its orientation in the AppA BLUF domain.
Journal of the American Chemical Society 2006;128(47):15066-7.
2006: van Wilderen L J G W; van der Horst M A; van Stokkum I H M; Hellingwerf K J; van Grondelle R; Groot M L
Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(41):15050-5.
2006: Visser Wouter F; van Roermund Carlo W T; Ijlst Lodewijk; Hellingwerf Klaas J; Waterham Hans R; Wanders Ronald J A
First identification of a 2-ketoglutarate/isocitrate transport system in mammalian peroxisomes and its characterization.
Biochemical and biophysical research communications 2006;348(4):1224-31.
2006: Avila-Pérez Marcela; Hellingwerf Klaas J; Kort Remco
Blue light activates the sigmaB-dependent stress response of Bacillus subtilis via YtvA.
Journal of bacteriology 2006;188(17):6411-4.
2006: Hazra Partha; Inoue Keiichi; Laan Wouter; Hellingwerf Klaas J; Terazima Masahide
Tetramer formation kinetics in the signaling state of AppA monitored by time-resolved diffusion.
Biophysical journal 2006;91(2):654-61.
2006: Yeremenko Sergey; van Stokkum Ivo H M; Moffat Keith; Hellingwerf Klaas J
Influence of the crystalline state on photoinduced dynamics of photoactive yellow protein studied by ultraviolet-visible transient absorption spectroscopy.
Biophysical journal 2006;90(11):4224-35.
2006: Veening Jan-Willem; Kuipers Oscar P; Brul Stanley; Hellingwerf Klaas J; Kort Remco
Effects of phosphorelay perturbations on architecture, sporulation, and spore resistance in biofilms of Bacillus subtilis.
Journal of bacteriology 2006;188(8):3099-109.
2006: van Stokkum I H M; Gobets B; Gensch T; Mourik F van; Hellingwerf K J; Grondelle R van; Kennis J T M
(Sub)-picosecond spectral evolution of fluorescence in photoactive proteins studied with a synchroscan streak camera system.
Photochemistry and photobiology 2006;82(2):380-8.
2006: Laan Wouter; Gauden Magdalena; Yeremenko Sergey; van Grondelle Rienk; Kennis John T M; Hellingwerf Klaas J
On the mechanism of activation of the BLUF domain of AppA.
Biochemistry 2006;45(1):51-60.
2006: Grinstead Jeffrey S; Hsu Shang-Te D; Laan Wouter; Bonvin Alexandre M J J; Hellingwerf Klaas J; Boelens Rolf; Kaptein Robert
The solution structure of the AppA BLUF domain: insight into the mechanism of light-induced signaling.
Chembiochem : a European journal of chemical biology 2006;7(1):187-93.
2006: Bekker Martijn; Teixeira de Mattos M Joost; Hellingwerf Klaas J
The role of two-component regulation systems in the physiology of the bacterial cell.
Science progress 2006;89(Pt 3-4):213-42.
2005: Premvardhan L; van der Horst M A; Hellingwerf K J; van Grondelle R
How light-induced charge transfer accelerates the receptor-state recovery of photoactive yellow protein from its signaling state.
Biophysical journal 2005;89(6):L64-6.
2005: van der Horst M A; Laan W; Yeremenko S; Wende A; Palm P; Oesterhelt D; Hellingwerf K J
From primary photochemistry to biological function in the blue-light photoreceptors PYP and AppA.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2005;4(9):688-93.
2005: Mensonides Femke I C; Brul Stanley; Klis Frans M; Hellingwerf Klaas J; Teixeira de Mattos M Joost
Activation of the protein kinase C1 pathway upon continuous heat stress in Saccharomyces cerevisiae is triggered by an intracellular increase in osmolarity due to trehalose accumulation.
Applied and environmental microbiology 2005;71(8):4531-8.
2005: Visser Wouter F; Van Roermund Carlo W; Ijlst Lodewijk; Hellingwerf Klaas J; Wanders Ronald J A; Waterham Hans R
Demonstration and characterization of phosphate transport in mammalian peroxisomes.
The Biochemical journal 2005;389(Pt 3):717-22.
2005: Bernard Cédric; Houben Klaartje; Derix Nocky M; Marks David; van der Horst Michael A; Hellingwerf Klaas J; Boelens Rolf; Kaptein Robert; van Nuland Nico A J
The solution structure of a transient photoreceptor intermediate: Delta25 photoactive yellow protein.
Structure (London, England : 1993) 2005;13(7):953-62.
2005: Kort Remco; O'Brien Andrea C; van Stokkum Ivo H M; Oomes Suus J C M; Crielaard Wim; Hellingwerf Klaas J; Brul Stanley
Assessment of heat resistance of bacterial spores from food product isolates by fluorescence monitoring of dipicolinic acid release.
Applied and environmental microbiology 2005;71(7):3556-64.
2005: van der Horst Michael A; van Stokkum Ivo H M; Dencher Norbert A; Hellingwerf Klaas J
Controlled reduction of the humidity induces a shortcut recovery reaction in the photocycle of photoactive yellow protein.
Biochemistry 2005;44(25):9160-7.
2005: Losi Aba; Gensch Thomas; van der Horst Michael A; Hellingwerf Klaas J; Braslavsky Silvia E
Hydrogen-bond network probed by time-resolved optoacoustic spectroscopy: photoactive yellow protein and the effect of E46Q and E46A mutations.
Physical chemistry chemical physics : PCCP 2005;7(10):2229-36.
2005: Vreede Jocelyne; Crielaard Wim; Hellingwerf Klaas J; Bolhuis Peter G
Predicting the signaling state of photoactive yellow protein.
Biophysical journal 2005;88(5):3525-35.
2005: Zakrzewska Anna; Boorsma Andre; Brul Stanley; Hellingwerf Klaas J; Klis Frans M
Transcriptional response of Saccharomyces cerevisiae to the plasma membrane-perturbing compound chitosan.
Eukaryotic cell 2005;4(4):703-15.
2005: Hellingwerf Klaas J
Bacterial observations: a rudimentary form of intelligence?
Trends in microbiology 2005;13(4):152-8.
2005: Vengris Mikas; Larsen Delmar S; van der Horst Michael A; Larsen Olaf F A; Hellingwerf Klaas J; van Grondelle Rienk
Ultrafast dynamics of isolated model photoactive yellow protein chromophores: "Chemical perturbation theory" in the laboratory.
The journal of physical chemistry. B 2005;109(9):4197-208.
2005: Gauden Magdalena; Yeremenko Sergey; Laan Wouter; van Stokkum Ivo H M; Ihalainen Janne A; van Grondelle Rienk; Hellingwerf Klaas J; Kennis John T M
Photocycle of the flavin-binding photoreceptor AppA, a bacterial transcriptional antirepressor of photosynthesis genes.
Biochemistry 2005;44(10):3653-62.
2005: Yeremenko Sergey; Hellingwerf Klaas J
Resolving protein structure dynamically.
Structure (London, England : 1993) 2005;13(1):4-6.
2004: Laan Wouter; Bednarz Teresa; Heberle Joachim; Hellingwerf Klaas J
Chromophore composition of a heterologously expressed BLUF-domain.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2004;3(11-12):1011-6.
2004: Hellingwerf Klaas J
A network of net-workers: report of the Euresco conference on 'Bacterial Neural Networks' held at San Feliu (Spain) from 8 to 14 May 2004.
Molecular microbiology 2004;54(1):2-13.
2004: Larsen Delmar S; van Stokkum Ivo H M; Vengris Mikas; van Der Horst Michael A; de Weerd Frank L; Hellingwerf Klaas J; van Grondelle Rienk
Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy.
Biophysical journal 2004;87(3):1858-72.
2004: Vengris Mikas; van der Horst Michael A; Zgrablic Goran; van Stokkum Ivo H M; Haacke Stefan; Chergui Majed; Hellingwerf Klaas J; van Grondelle Rienk; Larsen Delmar S
Contrasting the excited-state dynamics of the photoactive yellow protein chromophore: protein versus solvent environments.
Biophysical journal 2004;87(3):1848-57.
2004: de Groot Piet W J; de Boer Albert D; Cunningham Jeff; Dekker Henk L; de Jong Luitzen; Hellingwerf Klaas J; de Koster Chris; Klis Frans M
Proteomic analysis of Candida albicans cell walls reveals covalently bound carbohydrate-active enzymes and adhesins.
Eukaryotic cell 2004;3(4):955-65.
2004: Changenet-Barret Pascale; Espagne Agathe; Charier Sandrine; Baudin Jean-Bernard; Jullien Ludovic; Plaza Pascal; Hellingwerf Klaas J; Martin Monique M
Early molecular events in the photoactive yellow protein: role of the chromophore photophysics.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2004;3(8):823-9.
2004: Gensch Thomas; Hendriks Johnny; Hellingwerf Klaas J
Tryptophan fluorescence monitors structural changes accompanying signalling state formation in the photocycle of photoactive yellow protein.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2004;3(6):531-6.
2004: Kort Remco; Hellingwerf Klaas J; Ravelli Raimond B G
Initial events in the photocycle of photoactive yellow protein.
The Journal of biological chemistry 2004;279(25):26417-24.
2004: Boorsma André; de Nobel Hans; ter Riet Bas; Bargmann Bastiaan; Brul Stanley; Hellingwerf Klaas J; Klis Frans M
Characterization of the transcriptional response to cell wall stress in Saccharomyces cerevisiae.
Yeast (Chichester, England) 2004;21(5):413-27.
2004: Larsen Delmar S; Vengris Mikas; van Stokkum Ivo H M; van der Horst Michael A; de Weerd Frank L; Hellingwerf Klaas J; van Grondelle Rienk
Photoisomerization and photoionization of the photoactive yellow protein chromophore in solution.
Biophysical journal 2004;86(4):2538-50.
2004: van der Horst Michael A; Hellingwerf Klaas J
Photoreceptor proteins, "star actors of modern times": a review of the functional dynamics in the structure of representative members of six different photoreceptor families.
Accounts of chemical research 2004;37(1):13-20.
2003: Derix Nocky M; Wechselberger Rainer W; van der Horst Michael A; Hellingwerf Klaas J; Boelens Rolf; Kaptein Rob; van Nuland Nico A J
Lack of negative charge in the E46Q mutant of photoactive yellow protein prevents partial unfolding of the blue-shifted intermediate.
Biochemistry 2003;42(49):14501-6.
2003: Laan Wouter; van der Horst Michael A; van Stokkum Ivo H; Hellingwerf Klaas J
Initial characterization of the primary photochemistry of AppA, a blue-light-using flavin adenine dinucleotide-domain containing transcriptional antirepressor protein from Rhodobacter sphaeroides: a key role for reversible intramolecular proton transfer from the flavin adenine dinucleotide chromophore to a conserved tyrosine?
Photochemistry and photobiology 2003;78(3):290-7.
2003: Groot Marie Louise; van Wilderen Luuk J G W; Larsen Delmar S; van der Horst Michael A; van Stokkum Ivo H M; Hellingwerf Klaas J; van Grondelle Rienk
Initial steps of signal generation in photoactive yellow protein revealed with femtosecond mid-infrared spectroscopy.
Biochemistry 2003;42(34):10054-9.
2003: Kort Remco; Ravelli Raimond B; Schotte Friedrich; Bourgeois Dominique; Crielaard Wim; Hellingwerf Klaas J; Wulff Michael
Characterization of photocycle intermediates in crystalline photoactive yellow protein.
Photochemistry and photobiology 2003;78(2):131-7.
2003: De Groot Piet W J; Hellingwerf Klaas J; Klis Frans M
Genome-wide identification of fungal GPI proteins.
Yeast (Chichester, England) 2003;20(9):781-96.
2003: Premvardhan L L; van der Horst M A; Hellingwerf K J; van Grondelle R
Stark spectroscopy on photoactive yellow protein, E46Q, and a nonisomerizing derivative, probes photo-induced charge motion.
Biophysical journal 2003;84(5):3226-39.
2003: Vreede Jocelyne; van der Horst Michael A; Hellingwerf Klaas J; Crielaard Wim; van Aalten Daan M F
PAS domains. Common structure and common flexibility.
The Journal of biological chemistry 2003;278(20):18434-9.
2003: Haker Andrea; Hendriks Johnny; van Stokkum Ivo H M; Heberle Joachim; Hellingwerf Klaas J; Crielaard Wim; Gensch Thomas
The two photocycles of photoactive yellow protein from Rhodobacter sphaeroides.
The Journal of biological chemistry 2003;278(10):8442-51.
2003: Chen Eefei; Gensch Thomas; Gross Andrew B; Hendriks Johnny; Hellingwerf Klaas J; Kliger David S
Dynamics of protein and chromophore structural changes in the photocycle of photoactive yellow protein monitored by time-resolved optical rotatory dispersion.
Biochemistry 2003;42(7):2062-71.
2003: Hendriks Johnny; van Stokkum Ivo H M; Hellingwerf Klaas J
Deuterium isotope effects in the photocycle transitions of the photoactive yellow protein.
Biophysical journal 2003;84(2 Pt 1):1180-91.
2003: Armitage Judith P; Dorman Charles J; Hellingwerf Klaas; Schmitt Rudiger; Summers David; Holland Barry
Thinking and decision making, bacterial style: Bacterial Neural Networks, Obernai, France, 7th-12th June 2002.
Molecular microbiology 2003;47(2):583-93.
2003: Alexeeva Svetlana; Hellingwerf Klaas J; Teixeira de Mattos M Joost
Requirement of ArcA for redox regulation in Escherichia coli under microaerobic but not anaerobic or aerobic conditions.
Journal of bacteriology 2003;185(1):204-9.
2002: Brul Stanley; Coote Peter; Oomes Suus; Mensonides Femke; Hellingwerf Klaas; Klis Frans
Physiological actions of preservative agents: prospective of use of modern microbiological techniques in assessing microbial behaviour in food preservation.
International journal of food microbiology 2002;79(1-2):55-64.
2002: Hellingwerf Klaas J
The molecular basis of sensing and responding to light in microorganisms.
Antonie van Leeuwenhoek 2002;81(1-4):51-9.
2002: Klis Frans M; Mol Pieternella; Hellingwerf Klaas; Brul Stanley
Dynamics of cell wall structure in Saccharomyces cerevisiae.
FEMS microbiology reviews 2002;26(3):239-56.
2002: Verhamme Daniël T; Postma Pieter W; Crielaard Wim; Hellingwerf Klaas J
Cooperativity in signal transfer through the Uhp system of Escherichia coli.
Journal of bacteriology 2002;184(15):4205-10.
2002: van Aalten Daan M F; Crielaard Wim; Hellingwerf Klaas J; Joshua-Tor Leemor
Structure of the photoactive yellow protein reconstituted with caffeic acid at 1.16 A resolution.
Acta crystallographica. Section D, Biological crystallography 2002;58(Pt 4):585-90.
2002: Hendriks Johnny; Gensch Thomas; Hviid Lene; van Der Horst Michael A; Hellingwerf Klaas J; van Thor Jasper J
Transient exposure of hydrophobic surface in the photoactive yellow protein monitored with Nile Red.
Biophysical journal 2002;82(3):1632-43.
2002: Alexeeva Svetlana; Hellingwerf Klaas J; Teixeira de Mattos M Joost
Quantitative assessment of oxygen availability: perceived aerobiosis and its effect on flux distribution in the respiratory chain of Escherichia coli.
Journal of bacteriology 2002;184(5):1402-6.
2002: van Aalten Daan M F; Haker Andrea; Hendriks Johnny; Hellingwerf Klaas J; Joshua-Tor Leemor; Crielaard Wim
Engineering photocycle dynamics. Crystal structures and kinetics of three photoactive yellow protein hinge-bending mutants.
The Journal of biological chemistry 2002;277(8):6463-8.
2002: Verhamme Daniël T; Arents Jos C; Postma Pieter W; Crielaard Wim; Hellingwerf Klaas J
Investigation of in vivo cross-talk between key two-component systems of Escherichia coli.
Microbiology (Reading, England) 2002;148(Pt 1):69-78.
2002: van Rotterdam Bart J; Crielaard Wim; van Stokkum Ivo H M; Hellingwerf Klaas J; Westerhoff Hans V
Simplicity in complexity: the photosynthetic reaction center performs as a simple 0.2 V battery.
FEBS letters 2002;510(1-2):105-7.
2002: van Thor Jasper J; Gensch Thomas; Hellingwerf Klaas J; Johnson Louise N
Phototransformation of green fluorescent protein with UV and visible light leads to decarboxylation of glutamate 222.
Nature structural biology 2002;9(1):37-41.
2002: Mensonides Femke I C; Schuurmans J Merijn; Teixeira de Mattos M Joost; Hellingwerf Klaas J; Brul Stanley
The metabolic response of Saccharomyces cerevisiae to continuous heat stress.
Molecular biology reports 2002;29(1-2):103-6.
2002: van Thor Jasper J; Hellingwerf Klaas J
Fluorescence resonance energy transfer (FRET) applications using green fluorescent protein. Energy transfer to the endogenous chromophores of phycobilisome light-harvesting complexes.
Methods in molecular biology (Clifton, N.J.) 2002;183():101-19.
2001: Verhamme D T; Arents J C; Postma P W; Crielaard W; Hellingwerf K J
Glucose-6-phosphate-dependent phosphoryl flow through the Uhp two-component regulatory system.
Microbiology (Reading, England) 2001;147(Pt 12):3345-52.
2001: van Thor J J; Borucki B; Crielaard W; Otto H; Lamparter T; Hughes J; Hellingwerf K J; Heyn M P
Light-induced proton release and proton uptake reactions in the cyanobacterial phytochrome Cph1.
Biochemistry 2001;40(38):11460-71.
2001: Hoffer S M; Westerhoff H V; Hellingwerf K J; Postma P W; Tommassen J
Autoamplification of a two-component regulatory system results in "learning" behavior.
Journal of bacteriology 2001;183(16):4914-7.
2001: Rijkenberg M J; Kort R; Hellingwerf K J
Alkalispirillum mobile gen. nov., spec. nov., an alkaliphilic non-phototrophic member of the Ectothiorhodospiraceae.
Archives of microbiology 2001;175(5):369-75.
2001: van der Horst M A; van Stokkum I H; Crielaard W; Hellingwerf K J
The role of the N-terminal domain of photoactive yellow protein in the transient partial unfolding during signalling state formation.
FEBS letters 2001;497(1):26-30.
2001: van Rotterdam B J; Westerhoff H V; Visschers R W; Bloch D A; Hellingwerf K J; Jones M R; Crielaard W
Pumping capacity of bacterial reaction centers and backpressure regulation of energy transduction.
European journal of biochemistry / FEBS 2001;268(4):958-70.
2001: Klis F M; de Groot P; Hellingwerf K
Molecular organization of the cell wall of Candida albicans.
Medical mycology : official publication of the International Society for Human and Animal Mycology 2001;39 Suppl 1():1-8.
2000: van Rotterdam B J; Westerhoff H V; Visschers R W; Jones M R; Hellingwerf K J; Crielaard W
Steady-state cyclic electron transfer through solubilized Rhodobacter sphaeroides reaction centres.
Biophysical chemistry 2000;88(1-3):137-52.
2000: Haker A; Hendriks J; Gensch T; Hellingwerf K; Crielaard W
Isolation, reconstitution and functional characterisation of the Rhodobacter sphaeroides photoactive yellow protein.
FEBS letters 2000;486(1):52-6.
2000: Craven C J; Derix N M; Hendriks J; Boelens R; Hellingwerf K J; Kaptein R
Probing the nature of the blue-shifted intermediate of photoactive yellow protein in solution by NMR: hydrogen-deuterium exchange data and pH studies.
Biochemistry 2000;39(47):14392-9.
2000: Alexeeva S; de Kort B; Sawers G; Hellingwerf K J; de Mattos M J
Effects of limited aeration and of the ArcAB system on intermediary pyruvate catabolism in Escherichia coli.
Journal of bacteriology 2000;182(17):4934-40.
2000: Kandori H; Iwata T; Hendriks J; Maeda A; Hellingwerf K J
Water structural changes involved in the activation process of photoactive yellow protein.
Biochemistry 2000;39(27):7902-9.
2000: Kort R; Crielaard W; Spudich J L; Hellingwerf K J
Color-sensitive motility and methanol release responses in Rhodobacter sphaeroides.
Journal of bacteriology 2000;182(11):3017-21.
2000: van Thor J J; Jeanjean R; Havaux M; Sjollema K A; Joset F; Hellingwerf K J; Matthijs H C
Salt shock-inducible photosystem I cyclic electron transfer in Synechocystis PCC6803 relies on binding of ferredoxin:NADP(+) reductase to the thylakoid membranes via its CpcD phycobilisome-linker homologous N-terminal domain.
Biochimica et biophysica acta 2000;1457(3):129-44.
2000: Hellingwerf K J
Key issues in the photochemistry and signalling-state formation of photosensor proteins.
Journal of photochemistry and photobiology. B, Biology 2000;54(2-3):94-102.
2000: van Aalten D M; Crielaard W; Hellingwerf K J; Joshua-Tor L
Conformational substates in different crystal forms of the photoactive yellow protein--correlation with theoretical and experimental flexibility.
Protein science : a publication of the Protein Society 2000;9(1):64-72.
1999: van Thor J J; Geerlings T H; Matthijs H C; Hellingwerf K J
Kinetic evidence for the PsaE-dependent transient ternary complex photosystem I/Ferredoxin/Ferredoxin:NADP(+) reductase in a cyanobacterium.
Biochemistry 1999;38(39):12735-46.
1999: Hendriks J; van Stokkum I H; Crielaard W; Hellingwerf K J
Kinetics of and intermediates in a photocycle branching reaction of the photoactive yellow protein from Ectothiorhodospira halophila.
FEBS letters 1999;458(2):252-6.
1999: van Thor J J; Gruters O W; Matthijs H C; Hellingwerf K J
Localization and function of ferredoxin:NADP(+) reductase bound to the phycobilisomes of Synechocystis.
The EMBO journal 1999;18(15):4128-36.
1999: Hendriks J; Hoff W D; Crielaard W; Hellingwerf K J
Protonation/deprotonation reactions triggered by photoactivation of photoactive yellow protein from Ectothiorhodospira halophila.
The Journal of biological chemistry 1999;274(25):17655-60.
1999: Rubinstenn G; Vuister G W; Zwanenburg N; Hellingwerf K J; Boelens R; Kaptein R
NMR experiments for the study of photointermediates: application to the photoactive yellow protein.
Journal of magnetic resonance (San Diego, Calif. : 1997) 1999;137(2):443-7.
1999: Hoff W D; Xie A; Van Stokkum I H; Tang X J; Gural J; Kroon A R; Hellingwerf K J
Global conformational changes upon receptor stimulation in photoactive yellow protein.
Biochemistry 1999;38(3):1009-17.
1998: van Thor J J; Pierik A J; Nugteren-Roodzant I; Xie A; Hellingwerf K J
Characterization of the photoconversion of green fluorescent protein with FTIR spectroscopy.
Biochemistry 1998;37(48):16915-21.
1998: Hellingwerf K J; Crielaard W C; Joost Teixeira de Mattos M; Hoff W D; Kort R; Verhamme D T; Avignone-Rossa C
Current topics in signal transduction in bacteria.
Antonie van Leeuwenhoek 1998;74(4):211-27.
1998: van Aalten D M; Hoff W D; Findlay J B; Crielaard W; Hellingwerf K J
Concerted motions in the photoactive yellow protein.
Protein engineering 1998;11(10):873-9.
1998: Düx P; Rubinstenn G; Vuister G W; Boelens R; Mulder F A; Hård K; Hoff W D; Kroon A R; Crielaard W; Hellingwerf K J; Kaptein R
Solution structure and backbone dynamics of the photoactive yellow protein.
Biochemistry 1998;37(37):12689-99.
1998: Rubinstenn G; Vuister G W; Mulder F A; Düx P E; Boelens R; Hellingwerf K J; Kaptein R
Structural and dynamic changes of photoactive yellow protein during its photocycle in solution.
Nature structural biology 1998;5(7):568-70.
1998: Cordfunke R; Kort R; Pierik A; Gobets B; Koomen G J; Verhoeven J W; Hellingwerf K J
Trans/cis (Z/E) photoisomerization of the chromophore of photoactive yellow protein is not a prerequisite for the initiation of the photocycle of this photoreceptor protein.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(13):7396-401.
1998: Kort R; Phillips-Jones M K; van Aalten D M; Haker A; Hoffer S M; Hellingwerf K J; Crielaard W
Sequence, chromophore extraction and 3-D model of the photoactive yellow protein from Rhodobacter sphaeroides.
Biochimica et biophysica acta 1998;1385(1):1-6.
1998: Perman B; Srajer V; Ren Z; Teng T; Pradervand C; Ursby T; Bourgeois D; Schotte F; Wulff M; Kort R; Hellingwerf K; Moffat K
Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle.
Science (New York, N.Y.) 1998;279(5358):1946-50.
1998: van Thor J J; Hellingwerf K J; Matthijs H C
Characterization and transcriptional regulation of the Synechocystis PCC 6803 petH gene, encoding ferredoxin-NADP+ oxidoreductase: involvement of a novel type of divergent operator.
Plant molecular biology 1998;36(3):353-63.
1997: Palmen R; Hellingwerf K J
Uptake and processing of DNA by Acinetobacter calcoaceticus--a review.
Gene 1997;192(1):179-90.
1996: van der Zee J R; Postma P W; Hellingwerf K J
Quantitative conversion of glucose into glucose 6-phosphate by intact Escherichia coli cells.
Biotechnology and applied biochemistry 1996;24 ( Pt 3)():225-30.
1996: Kroon A R; Hoff W D; Fennema H P; Gijzen J; Koomen G J; Verhoeven J W; Crielaard W; Hellingwerf K J
Spectral tuning, fluorescence, and photoactivity in hybrids of photoactive yellow protein, reconstituted with native or modified chromophores.
The Journal of biological chemistry 1996;271(50):31949-56.
1996: Xie A; Hoff W D; Kroon A R; Hellingwerf K J
Glu46 donates a proton to the 4-hydroxycinnamate anion chromophore during the photocycle of photoactive yellow protein.
Biochemistry 1996;35(47):14671-8.
1996: Kok R G; Nudel C B; Gonzalez R H; Nugteren-Roodzant I M; Hellingwerf K J
Physiological factors affecting production of extracellular lipase (LipA) in Acinetobacter calcoaceticus BD413: fatty acid repression of lipA expression and degradation of LipA.
Journal of bacteriology 1996;178(20):6025-35.
1996: Hellingwerf K J; Hoff W D; Crielaard W
Photobiology of microorganisms: how photosensors catch a photon to initialize signalling.
Molecular microbiology 1996;21(4):683-93.
1996: Van Brederode M E; Hoff W D; Van Stokkum I H; Groot M L; Hellingwerf K J
Protein folding thermodynamics applied to the photocycle of the photoactive yellow protein.
Biophysical journal 1996;71(1):365-80.
1996: Kort R; Hoff W D; Van West M; Kroon A R; Hoffer S M; Vlieg K H; Crielaand W; Van Beeumen J J; Hellingwerf K J
The xanthopsins: a new family of eubacterial blue-light photoreceptors.
The EMBO journal 1996;15(13):3209-18.
1996: Rauch P J; Palmen R; Burds A A; Gregg-Jolly L A; van der Zee J R; Hellingwerf K J
The expression of the Acinetobacter calcoaceticus recA gene increases in response to DNA damage independently of RecA and of development of competence for natural transformation.
Microbiology (Reading, England) 1996;142 ( Pt 4)():1025-32.
1996: Kort R; Vonk H; Xu X; Hoff W D; Crielaard W; Hellingwerf K J
Evidence for trans-cis isomerization of the p-coumaric acid chromophore as the photochemical basis of the photocycle of photoactive yellow protein.
FEBS letters 1996;382(1-2):73-8.
1996: Hoff W D; Devreese B; Fokkens R; Nugteren-Roodzant I M; Van Beeumen J; Nibbering N; Hellingwerf K J
Chemical reactivity and spectroscopy of the thiol ester-linked p-coumaric acid chromophore in the photoactive yellow protein from Ectothiorhodospira halophila.
Biochemistry 1996;35(4):1274-81.
1995: Hoff W D; Matthijs H C; Schubert H; Crielaard W; Hellingwerf K J
Rhodopsin(s) in eubacteria.
Biophysical chemistry 1995;56(1-2):193-9.
1995: van de Zee J R; Postma P W; Hellingwerf K J
Non-physiological expression of UhpT does not lead to uncontrolled leakage of sugar phosphates out of Escherichia coli cells.
FEMS microbiology letters 1995;131(1):21-6.
1995: Kok R G; van Thor J J; Nugteren-Roodzant I M; Vosman B; Hellingwerf K J
Characterization of lipase-deficient mutants of Acinetobacter calcoaceticus BD413: identification of a periplasmic lipase chaperone essential for the production of extracellular lipase.
Journal of bacteriology 1995;177(11):3295-307.
1995: van Brederode M E; Gensch T; Hoff W D; Hellingwerf K J; Braslavsky S E
Photoinduced volume change and energy storage associated with the early transformations of the photoactive yellow protein from Ectothiorhodospira halophila.
Biophysical journal 1995;68(3):1101-9.
1995: Kok R G; van Thor J J; Nugteren-Roodzant I M; Brouwer M B; Egmond M R; Nudel C B; Vosman B; Hellingwerf K J
Characterization of the extracellular lipase, LipA, of Acinetobacter calcoaceticus BD413 and sequence analysis of the cloned structural gene.
Molecular microbiology 1995;15(5):803-18.
1995: Palmen R; Hellingwerf K J
Acinetobacter calcoaceticus liberates chromosomal DNA during induction of competence by cell lysis.
Current microbiology 1995;30(1):7-10.
1994: Kok R G; Christoffels V M; Vosman B; Hellingwerf K J
A gene of Acinetobacter calcoaceticus BD413 encodes a periplasmic peptidyl-prolyl cis-trans isomerase of the cyclophilin sub-class that is not essential for growth.
Biochimica et biophysica acta 1994;1219(3):601-6.
1994: Hoff W D; Düx P; Hård K; Devreese B; Nugteren-Roodzant I M; Crielaard W; Boelens R; Kaptein R; van Beeumen J; Hellingwerf K J
Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry.
Biochemistry 1994;33(47):13959-62.
1994: Hoff W D; van Stokkum I H; van Ramesdonk H J; van Brederode M E; Brouwer A M; Fitch J C; Meyer T E; van Grondelle R; Hellingwerf K J
Measurement and global analysis of the absorbance changes in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila.
Biophysical journal 1994;67(4):1691-705.
1994: Hoff W D; Sprenger W W; Postma P W; Meyer T E; Veenhuis M; Leguijt T; Hellingwerf K J
The photoactive yellow protein from Ectothiorhodospira halophila as studied with a highly specific polyclonal antiserum: (intra)cellular localization, regulation of expression, and taxonomic distribution of cross-reacting proteins.
Journal of bacteriology 1994;176(13):3920-7.
1994: Palmen R; Driessen A J; Hellingwerf K J
Bioenergetic aspects of the translocation of macromolecules across bacterial membranes.
Biochimica et biophysica acta 1994;1183(3):417-51.
1994: Hellingwerf K J; Crielaard W; Hoff W D; Matthijs H C; Mur L R; van Rotterdam B J
Photobiology of bacteria.
Antonie van Leeuwenhoek 1994;65(4):331-47.
1993: Kok R G; Christoffels V M; Vosman B; Hellingwerf K J
Growth-phase-dependent expression of the lipolytic system of Acinetobacter calcoaceticus BD413: cloning of a gene encoding one of the esterases.
Journal of general microbiology 1993;139(10):2329-42.
1993: Van Beeumen J J; Devreese B V; Van Bun S M; Hoff W D; Hellingwerf K J; Meyer T E; McRee D E; Cusanovich M A
Primary structure of a photoactive yellow protein from the phototrophic bacterium Ectothiorhodospira halophila, with evidence for the mass and the binding site of the chromophore.
Protein science : a publication of the Protein Society 1993;2(7):1114-25.
1993: Sprenger W W; Hoff W D; Armitage J P; Hellingwerf K J
The eubacterium Ectothiorhodospira halophila is negatively phototactic, with a wavelength dependence that fits the absorption spectrum of the photoactive yellow protein.
Journal of bacteriology 1993;175(10):3096-104.
1993: Leguijt T; Engels P W; Crielaard W; Albracht S P; Hellingwerf K J
Abundance, subunit composition, redox properties, and catalytic activity of the cytochrome bc1 complex from alkaliphilic and halophilic, photosynthetic members of the family Ectothiorhodospiraceae.
Journal of bacteriology 1993;175(6):1629-36.
1993: Palmen R; Vosman B; Buijsman P; Breek C K; Hellingwerf K J
Physiological characterization of natural transformation in Acinetobacter calcoaceticus.
Journal of general microbiology 1993;139(2):295-305.
1993: Vosman B; Rauch P J; Westerhoff H V; Hellingwerf K J
Regulation of the expression of the Pseudomonas stutzeri recA gene.
Antonie van Leeuwenhoek 1993;63(1):55-62.
1992: Palmen R; Vosman B; Kok R; van der Zee J R; Hellingwerf K J
Characterization of transformation-deficient mutants of Acinetobacter calcoaceticus.
Molecular microbiology 1992;6(13):1747-54.
1992: Crielaard W; van Mourik F; van Grondelle R; Konings W N; Hellingwerf K J
Spectral identification of the electrochromically active carotenoids of Rhodobacter sphaeroides in chromatophores and reconstituted liposomes.
Biochimica et biophysica acta 1992;1100(1):9-14.
1991: Sijtsma L; Hellingwerf K J
In Lactococcus lactis subsp. cremoris SK110 protein, instead of lipoteichoic acid, reacts with the group-N-specific antiserum.
FEMS microbiology immunology 1991;3(3):159-64.
1991: Vosman B; Hellingwerf K J
Molecular cloning and functional characterization of a recA analog from Pseudomonas stutzeri and construction of a P. stutzeri recA mutant.
Antonie van Leeuwenhoek 1991;59(2):115-23.
1990: Sijtsma L; Wouters J T; Hellingwerf K J
Isolation and characterization of lipoteichoic acid, a cell envelope component involved in preventing phage adsorption, from Lactococcus lactis subsp. cremoris SK110.
Journal of bacteriology 1990;172(12):7126-30.
1990: Abee T; Palmen R; Hellingwerf K J; Konings W N
Osmoregulation in Rhodobacter sphaeroides.
Journal of bacteriology 1990;172(1):149-54.
1989: Abee T; van der Wal F J; Hellingwerf K J; Konings W N
Binding-protein-dependent alanine transport in Rhodobacter sphaeroides is regulated by the internal pH.
Journal of bacteriology 1989;171(9):5148-54.
1988: Abee T; Hellingwerf K J; Konings W N
Effects of potassium ions on proton motive force in Rhodobacter sphaeroides.
Journal of bacteriology 1988;170(12):5647-53.
1988: Crielaard W; Driessen A J; Molenaar D; Hellingwerf K J; Konings W N
Light-driven amino acid uptake in Streptococcus cremoris or Clostridium acetobutylicum membrane vesicles fused with liposomes containing bacterial reaction centers.
Journal of bacteriology 1988;170(4):1820-4.

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