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Sepp Hochreiter

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Oligonucleotide Array Sequence Analysis

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Computational Biology

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GC Rich Sequence

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Publications

TOP 3
Günter Klambauer; Andreas Mayr; Andreas Mitterecker; Karin Schwarzbauer; Ulrich Bodenhofer; Djork-Arné Clevert; Sepp Hochreiter
cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate.
Karin Schwarzbauer; Ulrich Bodenhofer; Sepp Hochreiter
Genome-wide chromatin remodeling identified at GC-rich long nucleosome-free regions.
Ulrich Bodenhofer; Andreas Kothmeier; Sepp Hochreiter
APCluster: an R package for affinity propagation clustering.

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All Publications

2012: Günter Klambauer; Andreas Mayr; Andreas Mitterecker; Karin Schwarzbauer; Ulrich Bodenhofer; Djork-Arné Clevert; Sepp Hochreiter
cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate.
Nucleic acids research 2012;40(9):e69.
2012: Karin Schwarzbauer; Ulrich Bodenhofer; Sepp Hochreiter
Genome-wide chromatin remodeling identified at GC-rich long nucleosome-free regions.
PloS one 2012;7(11):e47924.
2011: Ulrich Bodenhofer; Andreas Kothmeier; Sepp Hochreiter
APCluster: an R package for affinity propagation clustering.
Bioinformatics (Oxford, England) 2011;27(17):2463-4.
2011: Djork-Arné Clevert; Hinrich Göhlmann; Günter Klambauer; Andreas Mayr; Andreas Mitterecker; Willem Talloen; Marianne Tuefferd; An De Bondt; Sepp Hochreiter
cn.FARMS: a latent variable model to detect copy number variations in microarray data with a low false discovery rate.
Nucleic acids research 2011;39(12):e79.
2011: Carsten C Mahrenholz; Ingrid G Abfalter; Ulrich Bodenhofer; Rudolf Volkmer; Sepp Hochreiter
Complex networks govern coiled-coil oligomerization--predicting and profiling by means of a machine learning approach.
Molecular & cellular proteomics : MCP 2011;10(5):M110.004994.
2010: Willem Talloen; Sepp Hochreiter; Luc Bijnens; Adetayo Kasim; Ziv Shkedy; Dhammika Amaratunga; Hinrich Göhlmann
Filtering data from high-throughput experiments based on measurement reliability.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(46):E173-4; author reply E175.
2010: Sepp Hochreiter; Ulrich Bodenhofer; Martin Heusel; Andreas Mayr; Andreas Mitterecker; Adetayo Kasim; Tatsiana Khamiakova; Suzy Van Sanden; Dan Lin; Willem Talloen; Luc Bijnens; Hinrich Göhlmann; Ziv Shkedy; Djork-Arné Clevert
FABIA: factor analysis for bicluster acquisition.
Bioinformatics (Oxford, England) 2010;26(12):1520-7.
2008: Tilman Knebel; Sepp Hochreiter; Klaus Obermayer
An SMO algorithm for the potential support vector machine.
Neural computation 2008;20(1):271-87.
2007: Willem Talloen; Djork-Arné Clevert; Sepp Hochreiter; Dhammika Amaratunga; Luc Bijnens; Stefan U Kass; Hinrich Göhlmann
I/NI-calls for the exclusion of non-informative genes: a highly effective filtering tool for microarray data.
Bioinformatics (Oxford, England) 2007;23(21):2897-902.
2007: Sepp Hochreiter; Martin Heusel; Klaus Obermayer
Fast model-based protein homology detection without alignment.
Bioinformatics (Oxford, England) 2007;23(14):1728-36.
2006: Sepp Hochreiter; Klaus Obermayer
Support vector machines for dyadic data.
Neural computation 2006;18(6):1472-510.
2006: Sepp Hochreiter; Djork-Arné Clevert; Klaus Obermayer
A new summarization method for Affymetrix probe level data.
Bioinformatics (Oxford, England) 2006;22(8):943-9.