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Eric Hoffman

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Publications

TOP 3
Sandeep Bodduluri; Eric A Hoffman; John D Newell; Joseph M Reinhardt
Registration-based lung mechanical analysis of chronic obstructive pulmonary disease (COPD) using a supervised machine learning framework.
Haribalan Kumar; Merryn H Tawhai; Dragos M Vasilescu; Youbing Yin; Eric A Hoffman; Ching-Long Lin
Multiscale imaging and registration-driven model for pulmonary acinar mechanics in the mouse.
Dragos M Vasilescu; Ge Wang; Ewald R Weibel; Leilei Yin; Christine Klinge; Lars Knudsen; Matthias Ochs; Eric A Hoffman
Stereological assessment of mouse lung parenchyma via nondestructive, multiscale micro-CT imaging validated by light microscopic histology.

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All Publications

2013: Sandeep Bodduluri; Eric A Hoffman; John D Newell; Joseph M Reinhardt
Registration-based lung mechanical analysis of chronic obstructive pulmonary disease (COPD) using a supervised machine learning framework.
Academic radiology 2013;20(5):527-36.
2013: Haribalan Kumar; Merryn H Tawhai; Dragos M Vasilescu; Youbing Yin; Eric A Hoffman; Ching-Long Lin
Multiscale imaging and registration-driven model for pulmonary acinar mechanics in the mouse.
Journal of applied physiology (Bethesda, Md. : 1985) 2013;114(8):971-8.
2013: Dragos M Vasilescu; Ge Wang; Ewald R Weibel; Leilei Yin; Christine Klinge; Lars Knudsen; Matthias Ochs; Eric A Hoffman
Stereological assessment of mouse lung parenchyma via nondestructive, multiscale micro-CT imaging validated by light microscopic histology.
Journal of applied physiology (Bethesda, Md. : 1985) 2013;114(6):716-24.
2012: Dragoş M Vasilescu; Ge Wang; Ewald R Weibel; Leilei Yin; Zhiyun Gao; Beatrice Haefeli-Bleuer; Matthias Ochs; Punam K Saha; Eric A Hoffman
Assessment of morphometry of pulmonary acini in mouse lungs by nondestructive imaging using multiscale microcomputed tomography.
Proceedings of the National Academy of Sciences of the United States of America 2012;109(42):17105-10.
2012: Jennine H Mitchell; Eric A Hoffman; Merryn H Tawhai
Relating indices of inert gas washout to localised bronchoconstriction.
Respiratory physiology & neurobiology 2012;183(3):224-33.
2012: Kai Ding; Kaifang Du; Matthew K Fuld; Eric A Hoffman; Kunlin Cao; Gary E Christensen; Joseph M Reinhardt
Comparison of image registration based measures of regional lung ventilation from dynamic spiral CT with Xe-CT.
Medical physics 2012;39(8):5084-98.
2012: Matthew K Fuld; Randall W Grout; Junfeng Guo; John H Morgan; Eric A Hoffman
Systems for lung volume standardization during static and dynamic MDCT-based quantitative assessment of pulmonary structure and function.
Academic radiology 2012;19(8):930-40.
2012: Shinjiro Miyawaki; Merryn H Tawhai; Eric A Hoffman; Ching-Long Lin
Effect of carrier gas properties on aerosol distribution in a CT-based human airway numerical model.
Annals of biomedical engineering 2012;40(7):1495-507.
2011: Jonathan Dakin; David M Hansell; Eric A Hoffman; Andrew T Jones; Timothy W Evans
Changes in lung composition and regional perfusion and tissue distribution in patients with ARDS.
Respirology (Carlton, Vic.) 2011;16(8):1265-72.
2011: J C Sieren; A R Smith; Jacqueline Thiesse; Eric A Hoffman; J N Kline; Eman Namati; Geoffrey McLennan
Exploration of the volumetric composition of human lung cancer nodules in correlated histopathology and computed tomography.
Lung cancer (Amsterdam, Netherlands) 2011;74(1):61-8.
2011: Mario Castro; Serpil C Erzurum; Sean B Fain; David S Gierada; Eric A Hoffman; Sally Wenzel
Lung imaging in asthmatic patients: the picture is clearer.
The Journal of allergy and clinical immunology 2011;128(3):467-78.
2011: Luke M Gabe; Gary W Hunninghake; Joseph M Reinhardt; Edwin J R Van Beek; Kimberly M Baker; Eric A Hoffman
Effect of segmental bronchoalveolar lavage on quantitative computed tomography of the lung.
Academic radiology 2011;18(7):876-84.
2011: Youbing Yin; Eric A Hoffman; Kai Ding; Joseph M Reinhardt; Ching-Long Lin
A cubic B-spline-based hybrid registration of lung CT images for a dynamic airway geometric model with large deformation.
Physics in medicine and biology 2011;56(1):203-18.
2010: Jacqueline Thiesse; Eman Namati; Jessica C Sieren; Amanda R Smith; Joseph M Reinhardt; Eric A Hoffman; Geoffrey McLennan
Lung structure phenotype variation in inbred mouse strains revealed through in vivo micro-CT imaging.
Journal of applied physiology (Bethesda, Md. : 1985) 2010;109(6):1960-8.
2010: Jiwoong Choi; Guohua Xia; Merryn H Tawhai; Eric A Hoffman; Ching-Long Lin
Numerical study of high-frequency oscillatory air flow and convective mixing in a CT-based human airway model.
Annals of biomedical engineering 2010;38(12):3550-71.
2010: Divay Chandra; David A Lipson; Eric A Hoffman; John Hansen-Flaschen; Frank C Sciurba; Malcolm M DeCamp; John J Reilly; George R Washko
Perfusion scintigraphy and patient selection for lung volume reduction surgery.
American journal of respiratory and critical care medicine 2010;182(7):937-46.
2010: Eman Namati; Jacqueline Thiesse; Jessica C Sieren; Alan Ross; Eric A Hoffman; Geoffrey McLennan
Longitudinal assessment of lung cancer progression in the mouse using in vivo micro-CT imaging.
Medical physics 2010;37(9):4793-805.
2010: Youbing Yin; Jiwoong Choi; Eric A Hoffman; Merryn H Tawhai; Ching-Long Lin
Simulation of pulmonary air flow with a subject-specific boundary condition.
Journal of biomechanics 2010;43(11):2159-63.
2010: Guohua Xia; Merryn H Tawhai; Eric A Hoffman; Ching-Long Lin
Airway wall stiffening increases peak wall shear stress: a fluid-structure interaction study in rigid and compliant airways.
Annals of biomedical engineering 2010;38(5):1836-53.
2010: Jessica C Sieren; Jamie A Weydert; Eman Namati; Jacqueline Thiesse; Jered P Sieren; Joseph M Reinhardt; Eric A Hoffman; Geoffrey McLennan
A process model for direct correlation between computed tomography and histopathology application in lung cancer.
Academic radiology 2010;17(2):169-80.
2010: Youbing Yin; Eric A Hoffman; Ching-Long Lin
Lung lobar slippage assessed with the aid of image registration.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 2010;13(Pt 2):578-85.
2009: Kelly S Burrowes; Eric A Hoffman; Merryn H Tawhai
Species-specific pulmonary arterial asymmetry determines species differences in regional pulmonary perfusion.
Annals of biomedical engineering 2009;37(12):2497-509.
2009: Youbing Yin; Eric A Hoffman; Ching-Long Lin
Mass preserving nonrigid registration of CT lung images using cubic B-spline.
Medical physics 2009;36(9):4213-22.
2009: Merryn H Tawhai; Martyn P Nash; Ching-Long Lin; Eric A Hoffman
Supine and prone differences in regional lung density and pleural pressure gradients in the human lung with constant shape.
Journal of applied physiology (Bethesda, Md. : 1985) 2009;107(3):912-20.
2009: Haribalan Kumar; Merryn H Tawhai; Eric A Hoffman; Ching-Long Lin
The effects of geometry on airflow in the acinar region of the human lung.
Journal of biomechanics 2009;42(11):1635-42.
2009: Ana Fernandez-Bustamante; RONALD EASLEY; Matthew K Fuld; Dan Mulreany; Eric A Hoffman; Bret Simon
Regional aeration and perfusion distribution in a sheep model of endotoxemic acute lung injury characterized by functional computed tomography imaging.
Critical care medicine 2009;37(8):2402-11.
2009: Merryn H Tawhai; Eric A Hoffman; Ching-Long Lin
The lung physiome: merging imaging-based measures with predictive computational models.
Wiley interdisciplinary reviews. Systems biology and medicine 2009;1(1):61-72.
2009: Eric A Hoffman; Rui Jiang; Heather Baumhauer; Michael A Brooks; John Carr; Robert Detrano; Joseph Reinhardt; Josanna Rodriguez; Karen Stukovsky; Nathan D Wong; R Graham Barr
Reproducibility and validity of lung density measures from cardiac CT Scans--The Multi-Ethnic Study of Atherosclerosis (MESA) Lung Study.
Academic radiology 2009;16(6):689-99.
2009: Kai Ding; Youbing Yin; Kunlin Cao; Gary E Christensen; Ching-Long Lin; Eric A Hoffman; Joseph M Reinhardt
Evaluation of lobar biomechanics during respiration using image registration.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 2009;12(Pt 1):739-46.
2009: Hidenori Shikata; Geoffrey McLennan; Eric A Hoffman; Milan Sonka
Segmentation of Pulmonary Vascular Trees from Thoracic 3D CT Images.
International journal of biomedical imaging 2009;2009():636240.
2008: Ravi S Aysola; Eric A Hoffman; David Gierada; Sally Wenzel; Janice Cook-Granroth; Jaime Tarsi; Jie Zheng; Kenneth B Schechtman; Thiruvamoor P Ramkumar; Rebecca Cochran; E Xueping; Chandrika Christie; John Newell; Sean Fain; Talissa A Altes; Mario Castro
Airway remodeling measured by multidetector CT is increased in severe asthma and correlates with pathology.
Chest 2008;134(6):1183-91.
2008: Joseph M Reinhardt; Kai Ding; Kunlin Cao; Gary E Christensen; Eric A Hoffman; Shalmali V Bodas
Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation.
Medical image analysis 2008;12(6):752-63.
2008: Matthew K Fuld; RONALD EASLEY; Osama I Saba; Deokiee Chon; Joseph M Reinhardt; Eric A Hoffman; Bret Simon
CT-measured regional specific volume change reflects regional ventilation in supine sheep.
Journal of applied physiology (Bethesda, Md. : 1985) 2008;104(4):1177-84.
2008: Edwin J R Van Beek; Eric A Hoffman
Functional imaging: CT and MRI.
Clinics in chest medicine 2008;29(1):195-216, vii.
2007: Ching-Long Lin; Merryn H Tawhai; Geoffrey McLennan; Eric A Hoffman
Characteristics of the turbulent laryngeal jet and its effect on airflow in the human intra-thoracic airways.
Respiratory physiology & neurobiology 2007;157(2-3):295-309.
2007: Deokiee Chon; Kenneth C Beck; Bret Simon; Hidenori Shikata; Osama I Saba; Eric A Hoffman
Effect of low-xenon and krypton supplementation on signal/noise of regional CT-based ventilation measurements.
Journal of applied physiology (Bethesda, Md. : 1985) 2007;102(4):1535-44.
2007: Senthil Kabilan; Ching-Long Lin; Eric A Hoffman
Characteristics of airflow in a CT-based ovine lung: a numerical study.
Journal of applied physiology (Bethesda, Md. : 1985) 2007;102(4):1469-82.
2007: Stephen J Burke; Ananth V Annapragada; Eric A Hoffman; Emmanuel Chen; Ketan B Ghaghada; Jered Sieren; Edwin J R Van Beek
Imaging of pulmonary embolism and t-PA therapy effects using MDCT and liposomal iohexol blood pool agent: preliminary results in a rabbit model.
Academic radiology 2007;14(3):355-62.
2007: Xiangwei Zhang; Jonathan Stockel; Matthias Wolf; Pascal Cathier; Geoffrey McLennan; Eric A Hoffman; Milan Sonka
A new method for spherical object detection and its application to computer aided detection of pulmonary nodules in CT images.
Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 2007;10(Pt 1):842-9.
2007: Geoffrey McLennan; J Scott Ferguson; Karl Thomas; Angela S Delsing; Janice Cook-Granroth; Eric A Hoffman
The use of MDCT-based computer-aided pathway finding for mediastinal and perihilar lymph node biopsy: a randomized controlled prospective trial.
Respiration; international review of thoracic diseases 2007;74(4):423-31.
2007: Joseph M Reinhardt; Gary E Christensen; Eric A Hoffman; Kai Ding; Kunlin Cao
Registration-derived estimates of local lung expansion as surrogates for regional ventilation.
Information processing in medical imaging : proceedings of the ... conference 2007;20():763-74.
2006: Deokiee Chon; Kenneth C Beck; Ranae L Larsen; Hidenori Shikata; Eric A Hoffman
Regional pulmonary blood flow in dogs by 4D-X-ray CT.
Journal of applied physiology (Bethesda, Md. : 1985) 2006;101(5):1451-65.
2006: Kálmán Palágyi; Juerg Tschirren; Eric A Hoffman; Milan Sonka
Quantitative analysis of pulmonary airway tree structures.
Computers in biology and medicine 2006;36(9):974-96.
2006: Eric A Hoffman; Bret Simon; Geoffrey McLennan
State of the Art. A structural and functional assessment of the lung via multidetector-row computed tomography: phenotyping chronic obstructive pulmonary disease.
Proceedings of the American Thoracic Society 2006;3(6):519-32.
2006: Ye Xu; Edwin J R Van Beek; Yu Hwanjo; Junfeng Guo; Geoffrey McLennan; Eric A Hoffman
Computer-aided classification of interstitial lung diseases via MDCT: 3D adaptive multiple feature method (3D AMFM).
Academic radiology 2006;13(8):969-78.
2006: Wissam Chatila; Eric A Hoffman; John Gaughan; G Blake Robinswood; Gerard J Criner
Advanced emphysema in African-American and white patients: do differences exist?
Chest 2006;130(1):108-18.
2006: Ye Xu; Milan Sonka; Geoffrey McLennan; Junfeng Guo; Eric A Hoffman
MDCT-based 3-D texture classification of emphysema and early smoking related lung pathologies.
IEEE transactions on medical imaging 2006;25(4):464-75.
2006: Merryn H Tawhai; Kelly S Burrowes; Eric A Hoffman
Computational models of structure-function relationships in the pulmonary circulation and their validation.
Experimental physiology 2006;91(2):285-93.
2006: Merryn H Tawhai; Martyn P Nash; Eric A Hoffman
An imaging-based computational approach to model ventilation distribution and soft-tissue deformation in the ovine lung.
Academic radiology 2006;13(1):113-20.
2006: Li Zhang; Eric A Hoffman; Joseph M Reinhardt
Atlas-driven lung lobe segmentation in volumetric X-ray CT images.
IEEE transactions on medical imaging 2006;25(1):1-16.
2005: Juerg Tschirren; Geoffrey McLennan; Kálmán Palágyi; Eric A Hoffman; Milan Sonka
Matching and anatomical labeling of human airway tree.
IEEE transactions on medical imaging 2005;24(12):1540-7.
2005: Juerg Tschirren; Eric A Hoffman; Geoffrey McLennan; Milan Sonka
Intrathoracic airway trees: segmentation and airway morphology analysis from low-dose CT scans.
IEEE transactions on medical imaging 2005;24(12):1529-39.
2005: Osama I Saba; Deokiee Chon; Kenneth Beck; Geoffrey McLennan; Jered Sieren; Joseph M Reinhardt; Eric A Hoffman
Static versus prospective gated non-breath hold volumetric MDCT imaging of the lungs.
Academic radiology 2005;12(11):1371-84.
2005: Cyril P Rooney; J Scott Ferguson; William Barnhart; Janice Cook-Granroth; Alan Ross; Eric A Hoffman; Geoffrey McLennan
Use of 3-dimensional computed tomography reconstruction studies in the preoperative assessment of patients undergoing balloon dilatation for tracheobronchial stenosis.
Respiration; international review of thoracic diseases 2005;72(6):579-86.
2005: Melissa Suter; Geoffrey McLennan; Joseph M Reinhardt; David Riker; Eric A Hoffman
Macro-optical color assessment of the pulmonary airways with subsequent three-dimensional multidetector-x-ray-computed-tomography assisted display.
Journal of biomedical optics 2005;10(5):051703.
2005: Deokiee Chon; Bret Simon; Kenneth C Beck; Hidenori Shikata; Osama I Saba; Chulho Won; Eric A Hoffman
Differences in regional wash-in and wash-out time constants for xenon-CT ventilation studies.
Respiratory physiology & neurobiology 2005;148(1-2):65-83.
2005: Xiangwei Zhang; Geoffrey McLennan; Eric A Hoffman; Milan Sonka
Automated detection of small-size pulmonary nodules based on helical CT images.
Information processing in medical imaging : proceedings of the ... conference 2005;19():664-76.
2005: Eric A Hoffman; Deokiee Chon
Computed tomography studies of lung ventilation and perfusion.
Proceedings of the American Thoracic Society 2005;2(6):492-8, 506.
2005: Juerg Tschirren; Eric A Hoffman; Geoffrey McLennan; Milan Sonka
Segmentation and quantitative analysis of intrathoracic airway trees from computed tomography images.
Proceedings of the American Thoracic Society 2005;2(6):484-7, 503-4.
2004: Eric A Hoffman; Anne V Clough; Gary E Christensen; Ching-Long Lin; Geoffrey McLennan; Joseph M Reinhardt; Bret Simon; Milan Sonka; Merryn H Tawhai; Edwin J R Van Beek; Ge Wang
The comprehensive imaging-based analysis of the lung: a forum for team science.
Academic radiology 2004;11(12):1370-80.
2004: Merryn H Tawhai; Peter Hunter; Juerg Tschirren; Joseph M Reinhardt; Geoffrey McLennan; Eric A Hoffman
CT-based geometry analysis and finite element models of the human and ovine bronchial tree.
Journal of applied physiology (Bethesda, Md. : 1985) 2004;97(6):2310-21.
2004: Kevin T Brumund; Scott M Graham; Kenneth C Beck; Eric A Hoffman; Geoffrey McLennan
The effect of maxillary sinus antrostomy size on xenon ventilation in the sheep model.
Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery 2004;131(4):528-33.
2004: Samuel G Armato; Geoffrey McLennan; Michael F McNitt-Gray; Charles R Meyer; David Yankelevitz; Denise R Aberle; Claudia I Henschke; Eric A Hoffman; Ella Annabelle Kazerooni; Heber MacMahon; Anthony P Reeves; Barbara Y Croft; Laurence P Clarke
Lung image database consortium: developing a resource for the medical imaging research community.
Radiology 2004;232(3):739-48.
2003: Eric A Hoffman; Joseph M Reinhardt; Milan Sonka; Bret Simon; Junfeng Guo; Osama I Saba; Deokiee Chon; Shaher Samrah; Hidenori Shikata; Juerg Tschirren; Kalman Palagyi; Kenneth C Beck; Geoffrey McLennan
Characterization of the interstitial lung diseases via density-based and texture-based analysis of computed tomography images of lung structure and function.
Academic radiology 2003;10(10):1104-18.
2003: Osama I Saba; Eric A Hoffman; Joseph M Reinhardt
Maximizing quantitative accuracy of lung airway lumen and wall measures obtained from X-ray CT imaging.
Journal of applied physiology (Bethesda, Md. : 1985) 2003;95(3):1063-75.
2003: Deniz Aykac; Eric A Hoffman; Geoffrey McLennan; Joseph M Reinhardt
Segmentation and analysis of the human airway tree from three-dimensional X-ray CT images.
IEEE transactions on medical imaging 2003;22(8):940-50.
2003: Chulho Won; Deokiee Chon; Jehangir Tajik; Binh Q Tran; G Blake Robinswood; Kenneth C Beck; Eric A Hoffman
CT-based assessment of regional pulmonary microvascular blood flow parameters.
Journal of applied physiology (Bethesda, Md. : 1985) 2003;94(6):2483-93.
2003: Chen-Yu Kao; Eric A Hoffman; Kenneth C Beck; Ravi V Bellamkonda; Ananth V Annapragada
Long-residence-time nano-scale liposomal iohexol for X-ray-based blood pool imaging.
Academic radiology 2003;10(5):475-83.
2003: Baojun Li; Gary E Christensen; Eric A Hoffman; Geoffrey McLennan; Joseph M Reinhardt
Establishing a normative atlas of the human lung: intersubject warping and registration of volumetric CT images.
Academic radiology 2003;10(3):255-65.
2002: Jehangir K Tajik; Deokiee Chon; Chulho Won; Binh Q Tran; Eric A Hoffman
Subsecond multisection CT of regional pulmonary ventilation.
Academic radiology 2002;9(2):130-46.
1997: Brian F Mullan; Jeffrey Galvin; J Zabner; Eric A Hoffman
Evaluation of in vivo total and regional air content and distribution in primate lungs with high-resolution CT.
Academic radiology 1997;4(10):674-9.
1997: R Uppaluri; T Mitsa; Milan Sonka; Eric A Hoffman; Geoffrey McLennan
Quantification of pulmonary emphysema from lung computed tomography images.
American journal of respiratory and critical care medicine 1997;156(1):248-54.