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Peter Holland

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Alan O Marron; Michael Akam; Mark J Alston; Mario Caccamo; Darren Heavens; Peter W H Holland; Giselle Walker
A family of diatom-like silicon transporters in the siliceous loricate choanoflagellates.
Jordi Paps; Peter W H Holland; Sebastian M Shimeld
A genome-wide view of transcription factor gene diversity in chordate evolution: less gene loss in amphioxus?
Jerome H L Hui; Carmel McDougall; Ana Sara Monteiro; Detlev Arendt; Guillaume Balavoine; Peter W H Holland; David E K Ferrier
Extensive chordate and annelid macrosynteny reveals ancestral homeobox gene organization.

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All Publications

2013: Alan O Marron; Michael Akam; Mark J Alston; Mario Caccamo; Darren Heavens; Peter W H Holland; Giselle Walker
A family of diatom-like silicon transporters in the siliceous loricate choanoflagellates.
Proceedings. Biological sciences / The Royal Society 2013;280(1756):20122543.
2012: Jordi Paps; Peter W H Holland; Sebastian M Shimeld
A genome-wide view of transcription factor gene diversity in chordate evolution: less gene loss in amphioxus?
Briefings in functional genomics 2012;11(2):177-86.
2012: Jerome H L Hui; Carmel McDougall; Ana Sara Monteiro; Detlev Arendt; Guillaume Balavoine; Peter W H Holland; David E K Ferrier
Extensive chordate and annelid macrosynteny reveals ancestral homeobox gene organization.
Molecular biology and evolution 2012;29(1):157-65.
2011: Ying-Fu Zhong; Peter W H Holland
HomeoDB2: functional expansion of a comparative homeobox gene database for evolutionary developmental biology.
Evolution & development 2011;13(6):567-8.
2011: Christoph Loenarz; Mathew L Coleman; Anna Boleininger; Bernd Schierwater; Peter W H Holland; Peter J Ratcliffe; Christopher J Schofield
The hypoxia-inducible transcription factor pathway regulates oxygen sensing in the simplest animal, Trichoplax adhaerens.
EMBO reports 2011;12(1):63-70.
2010: Thomas Butts; Peter W H Holland; David E K Ferrier
Ancient homeobox gene loss and the evolution of chordate brain and pharynx development: deductions from amphioxus gene expression.
Proceedings. Biological sciences / The Royal Society 2010;277(1699):3381-9.
2010: John F Mulley; Peter W H Holland
Parallel retention of Pdx2 genes in cartilaginous fish and coelacanths.
Molecular biology and evolution 2010;27(10):2386-91.
2009: Atsuko Sato; Helen White-Cooper; Karen Doggett; Peter W H Holland
Degenerate evolution of the hedgehog gene in a hemichordate lineage.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(18):7491-4.
2008: Naohito Takatori; Thomas Butts; Simona Candiani; Mario Pestarino; David E K Ferrier; Hidetoshi Saiga; Peter W H Holland
Comprehensive survey and classification of homeobox genes in the genome of amphioxus, Branchiostoma floridae.
Development genes and evolution 2008;218(11-12):579-90.
2008: Atsuko Sato; Peter W H Holland
Asymmetry in a pterobranch hemichordate and the evolution of left-right patterning.
Developmental dynamics : an official publication of the American Association of Anatomists 2008;237(12):3634-9.
2008: Jerome H L Hui; Peter W H Holland; David E K Ferrier
Do cnidarians have a ParaHox cluster? Analysis of synteny around a Nematostella homeobox gene cluster.
Evolution & development 2008;10(6):725-30.
2008: Atsuko Sato; John D D Bishop; Peter W H Holland
Developmental biology of pterobranch hemichordates: history and perspectives.
Genesis (New York, N.Y. : 2000) 2008;46(11):587-91.
2008: Simon Y W Ho; Greger Larson; Ceiridwen Edwards; Tim H Heupink; Kay E Lakin; Peter W H Holland; Beth Shapiro
Correlating Bayesian date estimates with climatic events and domestication using a bovine case study.
Biology letters 2008;4(4):370-4.
2008: Thomas Butts; Peter W H Holland; David E K Ferrier
The urbilaterian Super-Hox cluster.
Trends in genetics : TIG 2008;24(6):259-62.
2008: Peter W H Holland
Wholemount in situ hybridization to amphioxus embryos.
Methods in molecular biology (Clifton, N.J.) 2008;461():703-6.
2008: Peter W H Holland; Hiroshi Wada
Protochordates.
Methods in molecular biology (Clifton, N.J.) 2008;461():563-6.
2007: Rebecca F Furlong; Ruth Younger; Masanori Kasahara; Richard Reinhardt; Michael Thorndyke; Peter W H Holland
A degenerate ParaHox gene cluster in a degenerate vertebrate.
Molecular biology and evolution 2007;24(12):2681-6.
2007: Eva Jiménez-Guri; Beth Okamura; Peter W H Holland
Origin and evolution of a myxozoan worm.
Integrative and comparative biology 2007;47(5):752-8.
2007: Eva Jiménez-Guri; Hervé Philippe; Beth Okamura; Peter W H Holland
Buddenbrockia is a cnidarian worm.
Science (New York, N.Y.) 2007;317(5834):116-8.
2007: H Anne F Booth; Peter W H Holland
Annotation, nomenclature and evolution of four novel homeobox genes expressed in the human germ line.
Gene 2007;387(1-2):7-14.
2007: Peter W H Holland; H Anne F Booth; Elspeth A Bruford
Classification and nomenclature of all human homeobox genes.
BMC biology 2007;5():47.
2006: Peter K Dearden; Megan J Wilson; Lisha Sablan; Peter W Osborne; Melanie Havler; Euan McNaughton; Kiyoshi Kimura; Natalia V Milshina; Martin Hasselmann; Tanja Gempe; Morten Schioett; Susan J Brown; Christine G Elsik; Peter W H Holland; Tatsuhiko Kadowaki; Martin Beye
Patterns of conservation and change in honey bee developmental genes.
Genome research 2006;16(11):1376-84.
2006: John F Mulley; Chi-hua Chiu; Peter W H Holland
Breakup of a homeobox cluster after genome duplication in teleosts.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(27):10369-72.
2006: L Filipe C Castro; Stacy L K Rasmussen; Peter W H Holland; Nicholas D Holland; Linda Z Holland
A Gbx homeobox gene in amphioxus: insights into ancestry of the ANTP class and evolution of the midbrain/hindbrain boundary.
Developmental biology 2006;295(1):40-51.
2006: Ana Sara Monteiro; Bernd Schierwater; Stephen L Dellaporta; Peter W H Holland
A low diversity of ANTP class homeobox genes in Placozoa.
Evolution & development 2006;8(2):174-82.
2006: Elizabeth A Snell; Nina M Brooke; William R Taylor; Didier Casane; Hervé Philippe; Peter W H Holland
An unusual choanoflagellate protein released by Hedgehog autocatalytic processing.
Proceedings. Biological sciences / The Royal Society 2006;273(1585):401-7.
2006: P W Osborne; Graham N Luke; Peter W H Holland; David E K Ferrier
Identification and characterisation of five novel miniature inverted-repeat transposable elements (MITEs) in amphioxus (Branchiostoma floridae).
International journal of biological sciences 2006;2(2):54-60.
2005: Peter W H Holland; Tokiharu Takahashi
The evolution of homeobox genes: Implications for the study of brain development.
Brain research bulletin 2005;66(4-6):484-90.
2005: Cristina Minguillón; Josep Gardenyes; Elisa Serra; L Filipe C Castro; Alicia Hill-Force; Peter W H Holland; Chris T Amemiya; Jordi Garcia-Fernàndez
No more than 14: the end of the amphioxus Hox cluster.
International journal of biological sciences 2005;1(1):19-23.
2004: Hervé Philippe; Elizabeth A Snell; Eric Bapteste; Philippe Lopez; Peter W H Holland; Didier Casane
Phylogenomics of eukaryotes: impact of missing data on large alignments.
Molecular biology and evolution 2004;21(9):1740-52.
2004: H Anne F Booth; Peter W H Holland
Eleven daughters of NANOG.
Genomics 2004;84(2):229-38.
2004: Tokiharu Takahashi; Peter W H Holland
Amphioxus and ascidian Dmbx homeobox genes give clues to the vertebrate origins of midbrain development.
Development (Cambridge, England) 2004;131(14):3285-94.
2004: L Filipe C Castro; Rebecca F Furlong; Peter W H Holland
An antecedent of the MHC-linked genomic region in amphioxus.
Immunogenetics 2004;55(11):782-4.
2003: Nina M Brooke; Peter W H Holland
The evolution of multicellularity and early animal genomes.
Current opinion in genetics & development 2003;13(6):599-603.
2003: L Filipe C Castro; Peter W H Holland
Chromosomal mapping of ANTP class homeobox genes in amphioxus: piecing together ancestral genomes.
Evolution & development 2003;5(5):459-65.
2003: Graham N Luke; L Filipe C Castro; Kirsten McLay; Christine Bird; Alan Coulson; Peter W H Holland
Dispersal of NK homeobox gene clusters in amphioxus and humans.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(9):5292-5.
2003: Peter W H Holland
More genes in vertebrates?
Journal of structural and functional genomics 2003;3(1-4):75-84.
2002: L Filipe C Castro; Peter W H Holland
Fluorescent in situ hybridisation to amphioxus chromosomes.
Zoological science 2002;19(12):1349-53.
2002: Peter W H Holland
Ciona.
Current biology : CB 2002;12(18):R609.
2002: David E K Ferrier; Peter W H Holland
Ciona intestinalis ParaHox genes: evolution of Hox/ParaHox cluster integrity, developmental mode, and temporal colinearity.
Molecular phylogenetics and evolution 2002;24(3):412-7.
2002: Tokiharu Takahashi; Peter W H Holland; Martin J Cohn; Kiyoshi Shimizu; Mineo Kurokawa; Hisamaru Hirai
An orphan PRD class homeobox gene expressed in mouse brain and limb development.
Development genes and evolution 2002;212(6):293-7.
2002: Ana Sara Monteiro; Beth Okamura; Peter W H Holland
Orphan worm finds a home: Buddenbrockia is a myxozoan.
Molecular biology and evolution 2002;19(6):968-71.
2002: Rebecca F Furlong; Peter W H Holland
Bayesian phylogenetic analysis supports monophyly of ambulacraria and of cyclostomes.
Zoological science 2002;19(5):593-9.
2002: Rebecca F Furlong; Peter W H Holland
Were vertebrates octoploid?
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 2002;357(1420):531-44.
2001: Peter W H Holland
Beyond the Hox: how widespread is homeobox gene clustering?
Journal of anatomy 2001;199(Pt 1-2):13-23.
2001: David E K Ferrier; Peter W H Holland
Sipunculan ParaHox genes.
Evolution & development 2001;3(4):263-70.
2001: Elizabeth A Snell; Rebecca F Furlong; Peter W H Holland
Hsp70 sequences indicate that choanoflagellates are closely related to animals.
Current biology : CB 2001;11(12):967-70.
2001: David E K Ferrier; Nina M Brooke; G Panopoulou; Peter W H Holland
The Mnx homeobox gene class defined by HB9, MNR2 and amphioxus AmphiMnx.
Development genes and evolution 2001;211(2):103-7.
2001: David E K Ferrier; Peter W H Holland
Ancient origin of the Hox gene cluster.
Nature reviews. Genetics 2001;2(1):33-8.
2000: R D Knight; G D Panopoulou; Peter W H Holland; Sebastian M Shimeld
An amphioxus Krox gene: insights into vertebrate hindbrain evolution.
Development genes and evolution 2000;210(10):518-21.
2000: NA Williams; Peter W H Holland
An amphioxus Emx homeobox gene reveals duplication during vertebrate evolution.
Molecular biology and evolution 2000;17(10):1520-8.
2000: S L Pollard; Peter W H Holland
Evidence for 14 homeobox gene clusters in human genome ancestry.
Current biology : CB 2000;10(17):1059-62.
2000: David E K Ferrier; Cristina Minguillón; Peter W H Holland; Jordi Garcia-Fernàndez
The amphioxus Hox cluster: deuterostome posterior flexibility and Hox14.
Evolution & development 2000;2(5):284-93.
2000: Sebastian M Shimeld; Peter W H Holland
Vertebrate innovations.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(9):4449-52.
2000: Peter W H Holland
Embryonic development of heads, skeletons and amphioxus: Edwin S. Goodrich revisited.
The International journal of developmental biology 2000;44(1):29-34.
1999: Peter W H Holland
The future of evolutionary developmental biology.
Nature 1999;402(6761 Suppl):C41-4.
1999: A Rokas; J Kathirithamby; Peter W H Holland
Intron insertion as a phylogenetic character: the engrailed homeobox of Strepsiptera does not indicate affinity with Diptera.
Insect molecular biology 1999;8(4):527-30.
1999: M Kobayashi; H Furuya; Peter W H Holland
Dicyemids are higher animals.
Nature 1999;401(6755):762.
1999: Peter W H Holland
Gene duplication: past, present and future.
Seminars in cell & developmental biology 1999;10(5):541-7.
1999: Peter W H Holland
Introduction: gene duplication in development and evolution.
Seminars in cell & developmental biology 1999;10(5):515-6.
1999: H Wada; Jordi Garcia-Fernàndez; Peter W H Holland
Colinear and segmental expression of amphioxus Hox genes.
Developmental biology 1999;213(1):131-41.
1999: Graham N Luke; Peter W H Holland
Amphioxus type I keratin cDNA and the evolution of intermediate filament genes.
The Journal of experimental zoology 1999;285(1):50-6.
1999: Anna Sharman; Sebastian M Shimeld; Peter W H Holland
An amphioxus Msx gene expressed predominantly in the dorsal neural tube.
Development genes and evolution 1999;209(4):260-3.
1999: Peter W H Holland
Wholemount in situ hybridization to amphioxus embryos.
Methods in molecular biology (Clifton, N.J.) 1999;97():641-4.
1999: Peter W H Holland; H Wada
Protochordates.
Methods in molecular biology (Clifton, N.J.) 1999;97():513-6.
1999: Peter W H Holland
The effect of gene duplication on homology.
Novartis Foundation symposium 1999;222():226-36; discussion 236-42.
1998: S J Patton; Graham N Luke; Peter W H Holland
Complex history of a chromosomal paralogy region: insights from amphioxus aromatic amino acid hydroxylase genes and insulin-related genes.
Molecular biology and evolution 1998;15(11):1373-80.
1998: Anna Sharman; Peter W H Holland
Estimation of Hox gene cluster number in lampreys.
The International journal of developmental biology 1998;42(4):617-20.
1998: NA Williams; Peter W H Holland
Gene and domain duplication in the chordate Otx gene family: insights from amphioxus Otx.
Molecular biology and evolution 1998;15(5):600-7.
1998: Nina M Brooke; Jordi Garcia-Fernàndez; Peter W H Holland
The ParaHox gene cluster is an evolutionary sister of the Hox gene cluster.
Nature 1998;392(6679):920-2.
1998: H Wada; H Saiga; N Satoh; Peter W H Holland
Tripartite organization of the ancestral chordate brain and the antiquity of placodes: insights from ascidian Pax-2/5/8, Hox and Otx genes.
Development (Cambridge, England) 1998;125(6):1113-22.
1998: NA Williams; Peter W H Holland
Molecular evolution of the brain of chordates.
Brain, behavior and evolution 1998;52(4-5):177-85.
1997: Peter W H Holland
Vertebrate evolution: something fishy about Hox genes.
Current biology : CB 1997;7(9):R570-2.
1997: H Wada; Peter W H Holland; Shigeru Sato; H Yamamoto; N Satoh
Neural tube is partially dorsalized by overexpression of HrPax-37: the ascidian homologue of Pax-3 and Pax-7.
Developmental biology 1997;187(2):240-52.
1997: M J Telford; Peter W H Holland
Evolution of 28S ribosomal DNA in chaetognaths: duplicate genes and molecular phylogeny.
Journal of molecular evolution 1997;44(2):135-44.
1997: Anna Sharman; A Hay-Schmidt; Peter W H Holland
Cloning and analysis of an HMG gene from the lamprey Lampetra fluviatilis: gene duplication in vertebrate evolution.
Gene 1997;184(1):99-105.
1996: Peter W H Holland
Unity or diversity?
Trends in genetics : TIG 1996;12(8):324.
1996: Peter W H Holland; Jordi Garcia-Fernàndez
Hox genes and chordate evolution.
Developmental biology 1996;173(2):382-95.
1996: Jordi Garcia-Fernàndez; Peter W H Holland
Amphioxus Hox genes: insights into evolution and development.
The International journal of developmental biology 1996;Suppl 1():71S-72S.
1995: Peter W H Holland; B Koschorz; Linda Z Holland; Bernhard G Herrmann
Conservation of Brachyury (T) genes in amphioxus and vertebrates: developmental and evolutionary implications.
Development (Cambridge, England) 1995;121(12):4283-91.
1995: Peter W H Holland; A Graham
Evolution of regional identity in the vertebrate nervous system.
Perspectives on developmental neurobiology 1995;3(1):17-27.
1994: J Garcia-Fernández; Peter W H Holland
Archetypal organization of the amphioxus Hox gene cluster.
Nature 1994;370(6490):563-6.
1994: Peter W H Holland; Jordi Garcia-Fernàndez; N A Williams; A Sidow
Gene duplications and the origins of vertebrate development.
Development (Cambridge, England). Supplement 1994;():125-33.
1993: M J Telford; Peter W H Holland
The phylogenetic affinities of the chaetognaths: a molecular analysis.
Molecular biology and evolution 1993;10(3):660-76.
1993: Jonathan M W Slack; Peter W H Holland; Christopher F Graham
The zootype and the phylotypic stage.
Nature 1993;361(6412):490-2.
1992: Peter W H Holland; Linda Z Holland; N A Williams; Nicholas D Holland
An amphioxus homeobox gene: sequence conservation, spatial expression during development and insights into vertebrate evolution.
Development (Cambridge, England) 1992;116(3):653-61.
1991: Peter W H Holland; N A Williams; J Lanfear
Cloning of segment polarity gene homologues from the unsegmented brachiopod Terebratulina retusa (Linnaeus).
FEBS letters 1991;291(2):211-3.
1991: J Lanfear; T Jowett; Peter W H Holland
Cloning of fish zinc-finger genes related to Krox-20 and Krox-24.
Biochemical and biophysical research communications 1991;179(3):1220-4.
1991: Peter W H Holland; A M Hacker; N A Williams
A molecular analysis of the phylogenetic affinities of Saccoglossus cambrensis Brambell & Cole (Hemichordata).
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 1991;332(1264):185-9.
1991: J Lanfear; Peter W H Holland
The molecular evolution of ZFY-related genes in birds and mammals.
Journal of molecular evolution 1991;32(4):310-5.
1991: Peter W H Holland
Cloning and evolutionary analysis of msh-like homeobox genes from mouse, zebrafish and ascidian.
Gene 1991;98(2):253-7.
1990: Peter W H Holland; N A Williams
Conservation of engrailed-like homeobox sequences during vertebrate evolution.
FEBS letters 1990;277(1-2):250-2.
1988: Peter W H Holland; B L Hogan
Expression of homeo box genes during mouse development: a review.
Genes & development 1988;2(7):773-82.
1988: Peter W H Holland
Homeobox genes and the vertebrate head.
Development (Cambridge, England) 1988;103 Suppl():17-24.