FIND

researchers

DISCOVER

relevant articles

PROMOTE

your research

now for free

Hsien-Da Huang

Research Profile

Concepts & Ideas

Chemicals & Drugs

Genes & Molecular Sequences

Phenomena

Phosphorylation

Co-author Network

Publications

TOP 3
Hwei-Ming Wang; Chen-Tsung Weng; Shun-Long Weng; Wei-Yun Wu; Tzu-Hao Chang; Te-Hsin Chao; Ming-Cheng Chen; Feng-Fan Chiang; Chih-Min Chiu; Chao-Fang Chu; Wei-Chih Huang; Chao Liang; Feng-Mao Lin; Hsien-Da Huang
A new method for post Genome-Wide Association Study (GWAS) analysis of colorectal cancer in Taiwan.
Wen-Ling Chan; Ya-Sian Chang; Chien-Chih Chiu; Hsien-Da Huang; Shih-Ya Hung; Wen-Kuang Yang; Kun-Tu Yeh; Chung-Yee Yuo; Jan-Gowth Chang
Transcribed pseudogene ψPPM1K generates endogenous siRNA to suppress oncogenic cell growth in hepatocellular carcinoma.
Zhen Chen; Xiaopei Cui; Tzan Fang; Michael Hsiao; Hsien-Da Huang; Yi-Hua Jan; Hailing Jin; Tsung-Ching Lai; Ying-Shiuan Li; Feng-Mao Lin; Chellappan Padmanabhan; Ruobai Sun; Wei Sun; Danny Ling Wang; Wei-Chi Wang; Yun-Ting Wang; Han Xiao; Hongwei Zhao; Gar-Yang Chau; John Y-J Shyy
Hypoxia-responsive miRNAs target argonaute 1 to promote angiogenesis.

Register for free to view:

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the research activity
of experts around the globe

Geonetwork of Hsien-Da Huang (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

All Publications

2013: Hwei-Ming Wang; Chen-Tsung Weng; Shun-Long Weng; Wei-Yun Wu; Tzu-Hao Chang; Te-Hsin Chao; Ming-Cheng Chen; Feng-Fan Chiang; Chih-Min Chiu; Chao-Fang Chu; Wei-Chih Huang; Chao Liang; Feng-Mao Lin; Hsien-Da Huang
A new method for post Genome-Wide Association Study (GWAS) analysis of colorectal cancer in Taiwan.
Gene 2013;518(1):107-13.
2013: Wen-Ling Chan; Ya-Sian Chang; Chien-Chih Chiu; Hsien-Da Huang; Shih-Ya Hung; Wen-Kuang Yang; Kun-Tu Yeh; Chung-Yee Yuo; Jan-Gowth Chang
Transcribed pseudogene ψPPM1K generates endogenous siRNA to suppress oncogenic cell growth in hepatocellular carcinoma.
Nucleic acids research 2013;41(6):3734-47.
2013: Zhen Chen; Xiaopei Cui; Tzan Fang; Michael Hsiao; Hsien-Da Huang; Yi-Hua Jan; Hailing Jin; Tsung-Ching Lai; Ying-Shiuan Li; Feng-Mao Lin; Chellappan Padmanabhan; Ruobai Sun; Wei Sun; Danny Ling Wang; Wei-Chi Wang; Yun-Ting Wang; Han Xiao; Hongwei Zhao; Gar-Yang Chau; John Y-J Shyy
Hypoxia-responsive miRNAs target argonaute 1 to promote angiogenesis.
The Journal of clinical investigation 2013;123(3):1057-67.
2013: Wei-Kee Ong; Cheng-Ting Tsai; Yi-Shan Wong; Da-Jen Yen; Tzu-Hao Chang; How-Foo Chen; Shu Chien; Yun-Ju Fu; Hsien-Da Huang; Oscar Kuang-Sheng Lee; Jennifer Hui-Chun Ho
The activation of directional stem cell motility by green light-emitting diode irradiation.
Biomaterials 2013;34(8):1911-20.
2013: Wen-Ling Chan; Hsien-Da Huang; Wen-Kuang Yang; Jan-Gowth Chang
pseudoMap: an innovative and comprehensive resource for identification of siRNA-mediated mechanisms in human transcribed pseudogenes.
Database : the journal of biological databases and curation 2013;2013():bat001.
2013: Tzu-Hao Chang; Jorng-Tzong Horng; Justin Bo-Kai Hsu; Hsi-Yuan Huang; Shun-Long Weng; Hsien-Da Huang
An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs.
BMC bioinformatics 2013;14 Suppl 2():S4.
2013: Chih-Hung Chou; Min-Te Chou; Chiung-Chih Hsiao; Sheng-Da Hsu; Jui-Hung Hung; Feng-Mao Lin; Sirjana Shrestha; Shun-Long Weng; Tzu-Hao Chang; Hsien-Da Huang
A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing.
BMC genomics 2013;14 Suppl 1():S2.
2013: Tzu-Hao Chang; Shu-Pin Chen; Hsien-Da Huang; Tzong-Yi Lee; Li-Ching Wu; Jorng-Tzong Horng
EuLoc: a web-server for accurately predict protein subcellular localization in eukaryotes by incorporating various features of sequence segments into the general form of Chou's PseAAC.
Journal of computer-aided molecular design 2013;27(1):91-103.
2013: Cheng-Tsung Lu; Min-Gang Su; Kai-Yao Huang; Tzong-Yi Lee; Neil Arvin Bretaña; Wen-Chi Chang; Yi-Ju Chen; Yu-Ju Chen; Hsien-Da Huang
DbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications.
Nucleic acids research 2013;41(Database issue):D295-305.
2012: Chih-Hung Hsu; Huan Ming Hsu; Hsien-Da Huang; Yung-Ming Jeng; Yi-Ren Chen; Yen-Ting Chen; Chi-Shen Chu; Pei-Wen Hsiao; Ming-Lun Kang; SB Lee; Feng-Mao Lin; Ruo-Kai Lin; Shinn-Tsuen Lin; Yun-Yuh Lu; Kai-Lin Peng; Fan-Mei Tang; Yu-Ching Teng; Chin-Hsien Tsai; Yu-Chih Yang; Jyh-Cherng Yu; Li-Jung Juan
TET1 suppresses cancer invasion by activating the tissue inhibitors of metalloproteinases.
Cell reports 2012;2(3):568-79.
2012: Tzong-Yi Lee; Cheng-Tsung Lu; Yu-Chuan Teng; Yi-Ju Chen; Wei-Chieh Ching; Hsien-Da Huang; Yu-Ju Chen
dbSNO: a database of cysteine S-nitrosylation.
Bioinformatics (Oxford, England) 2012;28(17):2293-5.
2012: Wei-Chih Tsai; Jaw-Ching Wu; Hua-Chien Chen; Shu-Jen Chen; Michael Hsiao; Chu-Sui Hsu; Ming-Ta Hsu; Sheng-Da Hsu; Hsien-Da Huang; Yi Huang; Tsung-Ching Lai; Chien-Hsin Lee; Roger Shen; Ming-Shi Shiao; Ting-Fen Tsai; Ann-Ping Tsou
MicroRNA-122 plays a critical role in liver homeostasis and hepatocarcinogenesis.
The Journal of clinical investigation 2012;122(8):2884-97.
2012: Ju-Chien Cheng; Sheng-Da Hsu; Naoya Sakamoto; Ching-Ping Tseng; Yung-Ju Yeh; Yu-Ling Chang; Hsien-Da Huang
Let-7b is a novel regulator of hepatitis C virus replication.
Cellular and molecular life sciences : CMLS 2012;69(15):2621-33.
2012: Hsin-Yi Chen; Zhen Chen; Hsiang-Ching Chung; Hsien-Da Huang; John Huang; Yaw-Dong Lang; Jin-Tung Liang; Ching-Jung Lin; Feng-Mao Lin; Yu-Min Lin; John Y-J Shyy; Wei-Chi Wang; Ruey-Hwa Chen
miR-103/107 promote metastasis of colorectal cancer by targeting the metastasis suppressors DAPK and KLF4.
Cancer research 2012;72(14):3631-41.
2012: Hsin-Shih Wang; Hsien-Ming Wu; Chih-Feng Yen; Pi-Yueh Chang; Angel Chao; Bi-Hwa Cheng; Hsien-Da Huang; Yun-Shien Lee; Tzu-Hao Wang
Functional analyses of endometriosis-related polymorphisms in the estrogen synthesis and metabolism-related genes.
PloS one 2012;7(11):e47374.
2012: Wei-Chih Huang; Kuang-Wen Liao; Feng-Mao Lin; Tzu-Hao Chang; Hsien-Da Huang
Identifying cancer highly-expressed membrane receptors for targeted drug delivery.
International journal of bioinformatics research and applications 2012;8(3-4):192-209.
2011: Alex Bateman; Ewan Birney; Elspeth A Bruford; Janusz M Bujnicki; Guy Cochrane; James R Cole; Marcel E Dinger; Anton J Enright; Paul P Gardner; Daniel Gautheret; Sam Griffiths-Jones; Jen Harrow; Javier Herrero; Ian H Holmes; Hsien-Da Huang; Krystyna A Kelly; Paul Kersey; Ana Kozomara; Todd M Lowe; Manja Marz; Simon Moxon; Kim D Pruitt; Tore Samuelsson; Peter F Stadler; Albert J Vilella; Jan-Hinnerk Vogel; Kelly P Williams; Mathew W Wright; Shipra Agrawal; Christian Zwieb
RNAcentral: A vision for an international database of RNA sequences.
RNA (New York, N.Y.) 2011;17(11):1941-6.
2011: Wei Wu; Han Xiao; Yuzhi Zhang; Jing Zhou; Shu Chien; Guillermo García-Cardeña; Greg G Geary; Hsien-Da Huang; Andrés Laguna-Fernandez; Yi-Shuan Li; Guadalupe Villarreal; Kuei-Chun Wang; Wei-Chi Wang; John Y-J Shyy
Flow-Dependent Regulation of Kruppel-Like Factor 2 Is Mediated by MicroRNA-92a.
Circulation 2011;124(5):633-41.
2011: Michael J McDonald; Wei-Chi Wang; Hsien-Da Huang; Jun-Yi Leu
Clusters of nucleotide substitutions and insertion/deletion mutations are associated with repeat sequences.
PLoS biology 2011;9(6):e1000622.
2011: Xiaoming Zhang; Hongwei Zhao; Shang Gao; Wei-Chi Wang; Surekha Katiyar-Agarwal; Hsien-Da Huang; Natasha Raikhel; Hailing Jin
Arabidopsis Argonaute 2 regulates innate immunity via miRNA393(∗)-mediated silencing of a Golgi-localized SNARE gene, MEMB12.
Molecular cell 2011;42(3):356-66.
2011: Tzu-Hao Chang; Li-Ching Wu; Yu-Ting Chen; Hsien-Da Huang; Baw-Jhiune Liu; Kuang-Fu Cheng; Jorng-Tzong Horng
Characterization and prediction of mRNA polyadenylation sites in human genes.
Medical & biological engineering & computing 2011;49(4):463-72.
2011: Justin Bo-Kai Hsu; Neil Arvin Bretaña; Tzong-Yi Lee; Hsien-Da Huang
Incorporating evolutionary information and functional domains for identifying RNA splicing factors in humans.
PloS one 2011;6(11):e27567.
2011: Justin Bo-Kai Hsu; Sheng-Da Hsu; Chia-Hung Chien; Chih-Min Chiu; Wei-Yun Huang; Tzong-Yi Lee; Hsien-Da Huang
miRTar: an integrated system for identifying miRNA-target interactions in human.
BMC bioinformatics 2011;12():300.
2011: Tzong-Yi Lee; Tsung-Cheng Lu; Yi-Ju Chen; Hsien-Da Huang; Yu-Ju Chen
SNOSite: exploiting maximal dependence decomposition to identify cysteine S-nitrosylation with substrate site specificity.
PloS one 2011;6(7):e21849.
2011: Jan-Gowth Chang; Wen-Hsin Chang; Ya-Sian Chang; Lu-Ping Chow; Hsien-Da Huang; Cheng-Hao Hung; Hui-Hua Lin; Den-Mei Yang; Wen-Ling Chan; Wen-Kuang Yang
Small molecule amiloride modulates oncogenic RNA alternative splicing to devitalize human cancer cells.
PloS one 2011;6(6):e18643.
2011: Sheng-Da Hsu; Feng-Mao Lin; Wei-Yun Wu; Chao Liang; Wei-Chih Huang; Wen-Ling Chan; Wen-Ting Tsai; Goun-Zhou Chen; Chia-Jung Lee; Chih-Min Chiu; Chia-Hung Chien; Ming-Chia Wu; Chi-Ying Huang; Ann-Ping Tsou; Hsien-Da Huang
miRTarBase: a database curates experimentally validated microRNA-target interactions.
Nucleic acids research 2011;39(Database issue):D163-9.
2011: Tzong-Yi Lee; Justin Bo-Kai Hsu; Wen-Chi Chang; Hsien-Da Huang
RegPhos: a system to explore the protein kinase-substrate phosphorylation network in humans.
Nucleic acids research 2011;39(Database issue):D777-87.
2010: Tzong-Yi Lee; Justin Bo-Kai Hsu; Feng-Mao Lin; Wen-Chi Chang; Po-Chiang Hsu; Hsien-Da Huang
N-Ace: using solvent accessibility and physicochemical properties to identify protein N-acetylation sites.
Journal of computational chemistry 2010;31(15):2759-71.
2010: Shu-Chun Peng; Yen-Ting Lai; Hsi-Yuan Huang; Hsien-Da Huang; Yi-Shuian Huang
A novel role of CPEB3 in regulating EGFR gene transcription via association with Stat5b in neurons.
Nucleic acids research 2010;38(21):7446-57.
2010: Wei Sun; Yi-Shuan Julie Li; Hsien-Da Huang; John Y-J Shyy; Shu Chien
microRNA: a master regulator of cellular processes for bioengineering systems.
Annual review of biomedical engineering 2010;12():1-27.
2010: Kuan-Yu Lin; Chi-Ping Cheng; Bill Chia-Han Chang; Wei-Chi Wang; Ying-Wen Huang; Yun-Shien Lee; Hsien-Da Huang; Yau-Heiu Hsu; Na-Sheng Lin
Global analyses of small interfering RNAs derived from Bamboo mosaic virus and its associated satellite RNAs in different plants.
PloS one 2010;5(8):e11928.
2009: Wen-Chi Chang; Tzong-Yi Lee; Dray-Ming Shien; Justin Bo-Kai Hsu; Jorng-Tzong Horng; Po-Chiang Hsu; Ting-Yuan Wang; Hsien-Da Huang; Rong-Long Pan
Incorporating support vector machine for identifying protein tyrosine sulfation sites.
Journal of computational chemistry 2009;30(15):2526-37.
2009: Dray-Ming Shien; Tzong-Yi Lee; Wen-Chi Chang; Justin Bo-Kai Hsu; Jorng-Tzong Horng; Po-Chiang Hsu; Ting-Yuan Wang; Hsien-Da Huang
Incorporating structural characteristics for identification of protein methylation sites.
Journal of computational chemistry 2009;30(9):1532-43.
2009: Tzu-Hao Chang; Hsien-Da Huang; Li-Ching Wu; Chi-Ta Yeh; Baw-Jhiune Liu; Jorng-Tzong Horng
Computational identification of riboswitches based on RNA conserved functional sequences and conformations.
RNA (New York, N.Y.) 2009;15(7):1426-30.
2009: Chih-Hung Chou; Wen-Chi Chang; Chih-Min Chiu; Chih-Chang Huang; Hsien-Da Huang
FMM: a web server for metabolic pathway reconstruction and comparative analysis.
Nucleic acids research 2009;37(Web Server issue):W129-34.
2009: Wei-Chih Tsai; Paul Wei-Che Hsu; Tsung-Ching Lai; Gar-Yang Chau; Ching-Wen Lin; Chun-Ming Chen; Chien-Der Lin; Yu-Lun Liao; Jui-Ling Wang; Yat-Pang Chau; Ming-Ta Hsu; Michael Hsiao; Hsien-Da Huang; Ann-Ping Tsou
MicroRNA-122, a tumor suppressor microRNA that regulates intrahepatic metastasis of hepatocellular carcinoma.
Hepatology (Baltimore, Md.) 2009;49(5):1571-82.
2009: Wei-Chi Wang; Feng-Mao Lin; Wen-Chi Chang; Kuan-Yu Lin; Hsien-Da Huang; Na-Sheng Lin
miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression.
BMC bioinformatics 2009;10():328.
2009: Tzong-Yi Lee; Justin Bo-Kai Hsu; Wen-Chi Chang; Ting-Yuan Wang; Po-Chiang Hsu; Hsien-Da Huang
A comprehensive resource for integrating and displaying protein post-translational modifications.
BMC research notes 2009;2():111.
2008: Li-Cheng Wu; Jorng-Tzong Horng; Hsien-Da Huang; Wei-Long Chen
Identifying discriminative amino acids within the hemagglutinin of human influenza A H5N1 virus using a decision tree.
IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society 2008;12(6):689-95.
2008: Tzu-Hao Chang; Jorng-Tzong Horng; Hsien-Da Huang
RNALogo: a new approach to display structural RNA alignment.
Nucleic acids research 2008;36(Web Server issue):W91-6.
2008: Wen-Chi Chang; Tzong-Yi Lee; Hsien-Da Huang; His-Yuan Huang; Rong-Long Pan
PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups.
BMC genomics 2008;9():561.
2008: Sheng-Da Hsu; Chia-Huei Chu; Ann-Ping Tsou; Shu-Jen Chen; Hua-Chien Chen; Paul Wei-Che Hsu; Yung-Hao Wong; Yi-Hsuan Chen; Gian-Hung Chen; Hsien-Da Huang
miRNAMap 2.0: genomic maps of microRNAs in metazoan genomes.
Nucleic acids research 2008;36(Database issue):D165-9.
2007: Yung-Hao Wong; Tzong-Yi Lee; Han-Kuen Liang; Chia-Mao Huang; Ting-Yuan Wang; Yi-Huan Yang; Chia-Huei Chu; Hsien-Da Huang; Ming-Tat Ko; Jenn-Kang Hwang
KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns.
Nucleic acids research 2007;35(Web Server issue):W588-94.
2007: Paul Wei-Che Hsu; Li-Zen Lin; Sheng-Da Hsu; Justin Bo-Kai Hsu; Hsien-Da Huang
ViTa: prediction of host microRNAs targets on viruses.
Nucleic acids research 2007;35(Database issue):D381-5.
2006: Feng-Mao Lin; Hsien-Da Huang; Yu-Chung Chang; Ann-Ping Tsou; Pak-Leong Chan; Li-Cheng Wu; Meng-Feng Tsai; Jorng-Tzong Horng
Database to dynamically aid probe design for virus identification.
IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society 2006;10(4):705-13.
2006: Tzong-Yi Lee; Jorng-Tzong Horng; Hsueh-Fen Juan; Hsien-Da Huang; Li-Cheng Wu; Meng-Fong Tsai; Hsuan-Cheng Huang
An agent-based system to discover protein-protein interactions, identify protein complexes and proteins with multiple peptide mass fingerprints.
Journal of computational chemistry 2006;27(9):1020-32.
2006: Ann-Ping Tsou; Yi-Ming Sun; Chia-Lin Liu; Hsien-Da Huang; Jorng-Tzong Horng; Meng-Feng Tsai; Baw-Jhiune Liu
Biological data warehousing system for identifying transcriptional regulatory sites from gene expressions of microarray data.
IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society 2006;10(3):550-8.
2006: Jui-Hung Hung; Hsien-Da Huang; Tzong-Yi Lee
ProKware: integrated software for presenting protein structural properties in protein tertiary structures.
Nucleic acids research 2006;34(Web Server issue):W89-94.
2006: Hsi-Yuan Huang; Chia-Hung Chien; Kuan-Hua Jen; Hsien-Da Huang
RegRNA: an integrated web server for identifying regulatory RNA motifs and elements.
Nucleic acids research 2006;34(Web Server issue):W429-34.
2006: Tzu-Hao Chang; Hsien-Da Huang; Tzu-Neng Chuang; Dray-Ming Shien; Jorng-Tzong Horng
RNAMST: efficient and flexible approach for identifying RNA structural homologs.
Nucleic acids research 2006;34(Web Server issue):W423-8.
2006: Li-Cheng Wu; Jorng-Tzong Horng; Shir-Ly Huang; Hsien-Da Huang; Baw-Jhiune Liu
Detection of discriminative sequence motifs in proteins obtained from prokaryotes grown at various temperatures.
Journal of computational chemistry 2006;27(6):798-808.
2006: Yu-Ching Fang; Wei-Hsin Sun; Li-Cheng Wu; Hsien-Da Huang; Hsueh-Fen Juan; Jorng-Tzong Horng
RINGdb: an integrated database for G protein-coupled receptors and regulators of G protein signaling.
BMC genomics 2006;7():317.
2006: Tzong-Yi Lee; Hsien-Da Huang; Jui-Hung Hung; Hsi-Yuan Huang; Yuh-Shyong Yang; Tzu-Hao Wang
dbPTM: an information repository of protein post-translational modification.
Nucleic acids research 2006;34(Database issue):D622-7.
2006: Paul W C Hsu; Hsien-Da Huang; Sheng-Da Hsu; Li-Zen Lin; Ann-Ping Tsou; Ching-Ping Tseng; Peter F Stadler; Stefan Washietl; Ivo L Hofacker
miRNAMap: genomic maps of microRNA genes and their target genes in mammalian genomes.
Nucleic acids research 2006;34(Database issue):D135-9.
2005: Hsien-Da Huang; Tzong-Yi Lee; Shih-Wei Tzeng; Li-Cheng Wu; Jorng-Tzong Horng; Ann-Ping Tsou; Kuan-Tsae Huang
Incorporating hidden Markov models for identifying protein kinase-specific phosphorylation sites.
Journal of computational chemistry 2005;26(10):1032-41.
2005: Hsien-Da Huang; Tzong-Yi Lee; Shih-Wei Tzeng; Jorng-Tzong Horng
KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites.
Nucleic acids research 2005;33(Web Server issue):W226-9.
2005: Hsien-Da Huang; Tzong-Yi Lee; Li-Cheng Wu; Feng-Mao Lin; Hsueh-Fen Juan; Jorng-Tzong Horng; Ann-Ping Tsou
MultiProtIdent: identifying proteins using database search and protein-protein interactions.
Journal of proteome research 2005;4(3):690-7.
2005: Hsien-Da Huang; Jorng-Tzong Horng; Feng-Mao Lin; Yu-Chung Chang; Chen-Chia Huang
SpliceInfo: an information repository for mRNA alternative splicing in human genome.
Nucleic acids research 2005;33(Database issue):D80-5.
2004: Feng-Mao Lin; Hsien-Da Huang; Yu-Chung Chang; Jorng-Tzong Horng
i-Genome: a database to summarize oligonucleotide data in genomes.
BMC genomics 2004;5():78.
2004: Jorng-Tzong Horng; K C Hu; Li-Cheng Wu; Hsien-Da Huang; Feng-Mao Lin; Shir-Ly Huang; H C Lai; T Y Chu
Identifying the combination of genetic factors that determine susceptibility to cervical cancer.
IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society 2004;8(1):59-66.
2004: Shir-Ly Huang; Li-Cheng Wu; Hsien-Da Huang; Han-Kuen Liang; Ming-Tat Ko; Jorng-Tzong Horng
A probabilistic method to correlate ion pairs with protein thermostability.
Applied bioinformatics 2004;3(1):21-9.
2004: Hsien-Da Huang; Jorng-Tzong Horng; Yi-Ming Sun; Ann-Ping Tsou; Shir-Ly Huang
Identifying transcriptional regulatory sites in the human genome using an integrated system.
Nucleic acids research 2004;32(6):1948-56.
2003: Jorng-Tzong Horng; Hsien-Da Huang; Shih-Hsien Wang; Ming-You Chen; Shir-Ly Huang; Jenn-Kang Hwang
Computing motif correlations in proteins.
Journal of computational chemistry 2003;24(16):2032-43.
2003: Jorng-Tzong Horng; Feng-Mao Lin; J H Lin; Hsien-Da Huang; Baw-Jhiune Liu
Database of repetitive elements in complete genomes and data mining using transcription factor binding sites.
IEEE transactions on information technology in biomedicine : a publication of the IEEE Engineering in Medicine and Biology Society 2003;7(2):93-100.
2003: Hsien-Da Huang; Jorng-Tzong Horng; Chau-Chin Lee; Baw-Jhiune Liu
ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data.
Genome biology 2003;4(4):R29.
2002: Jorng-Tzong Horng; Hsien-Da Huang; Shir-Ly Huang; Ueng-Cheng Yan; Yu-Chang Chang
Mining putative regulatory elements in promoter regions of Saccharomyces cerevisiae.
In silico biology 2002;2(3):263-73.
2002: Jorng-Tzong Horng; Hsien-Da Huang; Ming-Hui Jin; Li-Cheng Wu; Shir-Ly Huang
The repetitive sequence database and mining putative regulatory elements in gene promoter regions.
Journal of computational biology : a journal of computational molecular cell biology 2002;9(4):621-40.