FIND

researchers

DISCOVER

relevant articles

PROMOTE

your research

now for free

Toshiko Ichiye

Research Profile

Chemicals & Drugs

Phenomena

Concepts & Ideas

Occupations

Thermodynamics

Living Beings

Co-author Network

Publications

TOP 3
B Scott Perrin; Toshiko Ichiye
Identifying Residues That Cause pH-Dependent Reduction Potentials.
Bradley Scott Perrin; Shuqiang Niu; Toshiko Ichiye
Calculating standard reduction potentials of [4Fe-4S] proteins.
Bradley Scott Perrin; Toshiko Ichiye
Characterizing the effects of the protein environment on the reduction potentials of metalloproteins.

Register for free to view:

Visualized networks:

See your personal network in
sophisticated graphical views

GeoTargeted Searches:

Locate experts around the world
and connect with global collaborators

Research Profiles:

See the research activity
of experts around the globe

Geonetwork of Toshiko Ichiye (preview)

Cities where this author has publications
Cities where co-authors of this author have publications

Flash Player Required

All Publications

2013: B Scott Perrin; Toshiko Ichiye
Identifying Residues That Cause pH-Dependent Reduction Potentials.
Biochemistry 2013;52(18):3022-4.
2013: Bradley Scott Perrin; Shuqiang Niu; Toshiko Ichiye
Calculating standard reduction potentials of [4Fe-4S] proteins.
Journal of computational chemistry 2013;34(7):576-82.
2013: Bradley Scott Perrin; Toshiko Ichiye
Characterizing the effects of the protein environment on the reduction potentials of metalloproteins.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2013;18(1):103-10.
2012: Yan Luo; Shuqiang Niu; Toshiko Ichiye
Understanding rubredoxin redox sites by density functional theory studies of analogues.
The journal of physical chemistry. A 2012;116(35):8918-24.
2011: Devrani Mitra; Vladimir Pelmenschikov; Ming-Liang Tan; Hongxin Wang; Yoshitaka Yoda; Jiyong Zhao; Weibing Dong; Yisong Guo; Toshiko Ichiye; Francis E Jenney; Michael W W Adams; David A Case; Stephen P Cramer
Dynamics of the [4Fe-4S] cluster in Pyrococcus furiosus D14C ferredoxin via nuclear resonance vibrational and resonance Raman spectroscopies, force field simulations, and density functional theory calculations.
Biochemistry 2011;50(23):5220-35.
2011: Shuqiang Niu; Ming-Liang Tan; Toshiko Ichiye
The large quadrupole of water molecules.
The Journal of chemical physics 2011;134(13):134501.
2010: Bradley Scott Perrin; Toshiko Ichiye
Fold versus sequence effects on the driving force for protein-mediated electron transfer.
Proteins 2010;78(13):2798-808.
2010: Jerez A Te; Toshiko Ichiye
Temperature and pressure dependence of the optimized soft-sticky dipole-quadrupole-octupole water model.
The Journal of chemical physics 2010;132(11):114511.
2010: Yan Luo; Can E Ergenekan; Justin T Fischer; Ming-Liang Tan; Toshiko Ichiye
The molecular determinants of the increased reduction potential of the rubredoxin domain of rubrerythrin relative to rubredoxin.
Biophysical journal 2010;98(4):560-8.
2009: Shuqiang Niu; Toshiko Ichiye
Probing ligand effects on the redox energies of [4Fe-4S] clusters using broken-symmetry density functional theory.
The journal of physical chemistry. A 2009;113(19):5671-6.
2009: Shuqiang Niu; Toshiko Ichiye
Cleavage of [4Fe-4S]-type clusters: breaking the symmetry.
The journal of physical chemistry. A 2009;113(19):5710-7.
2009: Shuqiang Niu; Toshiko Ichiye
Insight into environmental effects on bonding and redox properties of [4Fe-4S] clusters in proteins.
Journal of the American Chemical Society 2009;131(16):5724-5.
2008: Yuming Xiao; Ming-Liang Tan; Toshiko Ichiye; Hongxin Wang; Yisong Guo; Matt C Smith; Jacques Meyer; Wolfgang Sturhahn; Ercan E Alp; Jiyong Zhao; Yoshitaka Yoda; Stephen P Cramer
Dynamics of Rhodobacter capsulatus [2FE-2S] ferredoxin VI and Aquifex aeolicus ferredoxin 5 via nuclear resonance vibrational spectroscopy (NRVS) and resonance Raman spectroscopy.
Biochemistry 2008;47(25):6612-27.
2007: Ming-Liang Tan; Anna Rita Bizzarri; Yuming Xiao; Salvatore Cannistraro; Toshiko Ichiye; Cristian Manzoni; Giulio Cerullo; Michael W W Adams; Francis E Jenney; Stephen P Cramer
Observation of terahertz vibrations in Pyrococcus furiosus rubredoxin via impulsive coherent vibrational spectroscopy and nuclear resonance vibrational spectroscopy--interpretation by molecular mechanics.
Journal of inorganic biochemistry 2007;101(3):375-84.
2006: Snehasis Chowdhuri; Ming-Liang Tan; Toshiko Ichiye
Dynamical properties of the soft sticky dipole-quadrupole-octupole water model: a molecular dynamics study.
The Journal of chemical physics 2006;125(14):144513.
2006: Ming-Liang Tan; Laurentia Lucan; Toshiko Ichiye
Study of multipole contributions to the structure of water around ions in solution using the soft sticky dipole-quadrupole-octupole (SSDQO) model of water.
The Journal of chemical physics 2006;124(17):174505.
2006: Toshiko Ichiye; Ming-Liang Tan
Soft sticky dipole-quadrupole-octupole potential energy function for liquid water: an approximate moment expansion.
The Journal of chemical physics 2006;124(13):134504.
2006: Ming-Liang Tan; ChulHee Kang; Toshiko Ichiye
The role of backbone stability near Ala44 in the high reduction potential class of rubredoxins.
Proteins 2006;62(3):708-14.
2005: Can E Ergenekan; Ming-Liang Tan; Toshiko Ichiye
Effects of environment on the structure of Pyrococcus furiosus rubredoxin: a molecular dynamics study.
Proteins 2005;61(4):823-8.
2005: You-Jun Fu; Shuqiang Niu; Toshiko Ichiye; Lai-Sheng Wang
Electronic structure and intrinsic redox properties of [2Fe-2S]+ clusters with tri- and tetracoordinate iron sites.
Inorganic chemistry 2005;44(5):1202-4.
2004: Xin Yang; Shuqiang Niu; Toshiko Ichiye; Lai-Sheng Wang
Direct measurement of the hydrogen-bonding effect on the intrinsic redox potentials of [4Fe-4S] cubane complexes.
Journal of the American Chemical Society 2004;126(48):15790-4.
2004: Il Yeong Park; Marly K Eidsness; I-Jin Lin; Erika B Gebel; Buhyun Youn; Jill L Harley; Timothy E Machonkin; Ronnie O Frederick; John Lute Markley; Eugene Smith; Toshiko Ichiye; ChulHee Kang
Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: effects of side-chain size on reduction potential.
Proteins 2004;57(3):618-25.
2004: Il Yeong Park; Buhyun Youn; Jill L Harley; Marly K Eidsness; Eugene Smith; Toshiko Ichiye; ChulHee Kang
The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer.
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2004;9(4):423-8.
2004: Elizabeth A Dolan; Robert B Yelle; Brian W Beck; Justin T Fischer; Toshiko Ichiye
Protein control of electron transfer rates via polarization: molecular dynamics studies of rubredoxin.
Biophysical journal 2004;86(4):2030-6.
2003: Xue-Bin Wang; Shuqiang Niu; Xin Yang; Saad K Ibrahim; Christopher Pickett; Toshiko Ichiye; Lai-Sheng Wang
Probing the intrinsic electronic structure of the cubane [4Fe-4S] cluster: nature's favorite cluster for electron transfer and storage.
Journal of the American Chemical Society 2003;125(46):14072-81.
2003: Can E Ergenekan; Dustin Thomas; Justin T Fischer; Ming-Liang Tan; Marly K Eidsness; ChulHee Kang; Toshiko Ichiye
Prediction of reduction potential changes in rubredoxin: a molecular mechanics approach.
Biophysical journal 2003;85(5):2818-29.
2002: Xin Yang; Xue-Bin Wang; Shuqiang Niu; Christopher Pickett; Toshiko Ichiye; Lai-Sheng Wang
Coulomb- and antiferromagnetic-induced fission in doubly charged cubelike fe-s clusters.
Physical review letters 2002;89(16):163401.
2001: B W Beck; Q Xie; Toshiko Ichiye
Sequence determination of reduction potentials by cysteinyl hydrogen bonds and peptide pipoles in [4Fe-4S] ferredoxins.
Biophysical journal 2001;81(2):601-13.
2001: Tongpil Min; Can E Ergenekan; Marly K Eidsness; Toshiko Ichiye; ChulHee Kang
Leucine 41 is a gate for water entry in the reduction of Clostridium pasteurianum rubredoxin.
Protein science : a publication of the Protein Society 2001;10(3):613-21.
1999: Marly K Eidsness; Amy Burden Irwin; K A Richie; Donald M Kurtz; Robert A Scott; Eugene Smith; Toshiko Ichiye; B Beard; Tongpil Min; ChulHee Kang
Modulation of the redox potential of the [Fe(SCys)(4)] site in rubredoxin by the orientation of a peptide dipole.
Biochemistry 1999;38(45):14803-9.
1999: Y Liu; Toshiko Ichiye
Integral equation theories for predicting water structure around molecules.
Biophysical chemistry 1999;78(1-2):97-111.
1997: P D Swartz; Toshiko Ichiye
Protein contributions to redox potentials of homologous rubredoxins: an energy minimization study.
Biophysical journal 1997;73(5):2733-41.
1996: P D Swartz; B W Beck; Toshiko Ichiye
Structural origins of redox potentials in Fe-S proteins: electrostatic potentials of crystal structures.
Biophysical journal 1996;71(6):2958-69.
1996: P D Swartz; Toshiko Ichiye
Temperature dependence of the redox potential of rubredoxin from Pyrococcus furiosus: a molecular dynamics study.
Biochemistry 1996;35(43):13772-9.
1996: Toshiko Ichiye
A dawning light: the beginnings of an understanding of the photosynthetic reaction center.
Structure (London, England : 1993) 1996;4(9):1009-12.
1995: R B Yelle; N S Park; Toshiko Ichiye
Molecular dynamics simulations of rubredoxin from Clostridium pasteurianum: changes in structure and electrostatic potential during redox reactions.
Proteins 1995;22(2):154-67.
1993: V S Shenoy; Toshiko Ichiye
Influence of protein flexibility on the redox potential of rubredoxin: energy minimization studies.
Proteins 1993;17(2):152-60.