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Tadashi Imanishi

Research Profile

Genes & Molecular Sequences

Chemicals & Drugs

Occupations

Physiology

Transcription, Genetic

Procedures

Concepts & Ideas

Activities & Behaviors

Systems Integration

Phenomena

Evolution, Molecular

Co-author Network

Publications

TOP 3
Craig Alan Gough; Keiichi Homma; Tadashi Imanishi; Hisakazu Iwama; Shinsei Minoshima; Ken Nishikawa; Shigetaka Sakamoto; Yoshiharu Sato; Makoto K Shimada; Yoshiyuki Suzuki; Masahito Tada-Umezaki; Yumi Yamaguchi-Kabata; Ranajit Chakraborty; Yasuyuki Fujii; Takashi Gojobori
Prediction of protein-destabilizing polymorphisms by manual curation with protein structure.
Toshinori Endo; Keisuke Ueno; Kouki Yonezawa; KATSUHIKO MINETA; Kohji Hotta; Yutaka Satou; Lixy Yamada; Michio Ogasawara; Hiroki Takahashi; Ayako Nakajima; Mia Nakachi; Mamoru Nomura; Junko Yaguchi; Yasunori Sasakura; Chisato Yamasaki; Miho Sera; Akiyasu C Yoshizawa; Tadashi Imanishi; Hisaaki Taniguchi; Kazuo Inaba
CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality.
Makoto K Shimada; Yosuke Hayakawa; Jun-ichi Takeda; Takashi Gojobori; Tadashi Imanishi
A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing.

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All Publications

2012: Craig Alan Gough; Keiichi Homma; Tadashi Imanishi; Hisakazu Iwama; Shinsei Minoshima; Ken Nishikawa; Shigetaka Sakamoto; Yoshiharu Sato; Makoto K Shimada; Yoshiyuki Suzuki; Masahito Tada-Umezaki; Yumi Yamaguchi-Kabata; Ranajit Chakraborty; Yasuyuki Fujii; Takashi Gojobori
Prediction of protein-destabilizing polymorphisms by manual curation with protein structure.
PloS one 2012;7(11):e50445.
2011: Toshinori Endo; Keisuke Ueno; Kouki Yonezawa; KATSUHIKO MINETA; Kohji Hotta; Yutaka Satou; Lixy Yamada; Michio Ogasawara; Hiroki Takahashi; Ayako Nakajima; Mia Nakachi; Mamoru Nomura; Junko Yaguchi; Yasunori Sasakura; Chisato Yamasaki; Miho Sera; Akiyasu C Yoshizawa; Tadashi Imanishi; Hisaaki Taniguchi; Kazuo Inaba
CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality.
Nucleic acids research 2011;39(Database issue):D807-14.
2010: Makoto K Shimada; Yosuke Hayakawa; Jun-ichi Takeda; Takashi Gojobori; Tadashi Imanishi
A comprehensive survey of human polymorphisms at conserved splice dinucleotides and its evolutionary relationship with alternative splicing.
BMC evolutionary biology 2010;10():122.
2009: Yoshihiro Kawahara; Ryuichi Sakate; Akihiro Matsuya; Katsuhiko Murakami; Yoshiharu Sato; Hao Zhang; Takashi Gojobori; Takeshi Itoh; Tadashi Imanishi
G-compass: a web-based comparative genome browser between human and other vertebrate genomes.
Bioinformatics (Oxford, England) 2009;25(24):3321-2.
2008: Yumi Yamaguchi-Kabata; Makoto K Shimada; Yosuke Hayakawa; Shinsei Minoshima; Ranajit Chakraborty; Takashi Gojobori; Tadashi Imanishi
Distribution and effects of nonsense polymorphisms in human genes.
PloS one 2008;3(10):e3393.
2008: Katsuhiko Murakami; Tadashi Imanishi; Takashi Gojobori; Kenta Nakai
Two different classes of co-occurring motif pairs found by a novel visualization method in human promoter regions.
BMC genomics 2008;9():112.
2007: Ryuichi Sakate; Yumiko Suto; Tadashi Imanishi; Tetsuya Tanoue; Munetomo Hida; Ikuo Hayasaka; Jun Kusuda; Takashi Gojobori; Katsuyuki Hashimoto; Momoki Hirai
Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome.
Gene 2007;399(1):1-10.
2007: Hiroaki Sakai; Kanako O Koyanagi; Tadashi Imanishi; Takeshi Itoh; Takashi Gojobori
Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes.
Gene 2007;389(2):196-203.
2007: Jun-ichi Takeda; Yutaka Suzuki; Mitsuteru Nakao; Tsuyoshi Kuroda; Sumio Sugano; Takashi Gojobori; Tadashi Imanishi
H-DBAS: alternative splicing database of completely sequenced and manually annotated full-length cDNAs based on H-Invitational.
Nucleic acids research 2007;35(Database issue):D104-9.
2007: Craig A Gough; Takashi Gojobori; Tadashi Imanishi
Cancer-related mutations in BRCA1-BRCT cause long-range structural changes in protein-protein binding sites: a molecular dynamics study.
Proteins 2007;66(1):69-86.
2006: Kei Yura; Masafumi Shionyu; Kei Hagino; Atsushi Hijikata; Yoshinori Hirashima; Taku Nakahara; Tatsuya Eguchi; Kazuki Shinoda; Akihiro Yamaguchi; Ken-Ichi Takahashi; Takeshi Itoh; Tadashi Imanishi; Takashi Gojobori; Mitiko Go
Alternative splicing in human transcriptome: functional and structural influence on proteins.
Gene 2006;380(2):63-71.
2006: Chisato Yamasaki; Hiroaki Kawashima; Fusano Todokoro; Yasuhiro Imamizu; Makoto Ogawa; Motohiko Tanino; Takeshi Itoh; Takashi Gojobori; Tadashi Imanishi
TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB.
Nucleic acids research 2006;34(Web Server issue):W345-9.
2006: Jun-ichi Takeda; Yutaka Suzuki; Mitsuteru Nakao; Roberto A Barrero; Kanako O Koyanagi; Lihua Jin; Chie Motono; Hiroko Hata; Takao Isogai; Keiichi Nagai; Tetsuji Otsuki; Vladimir Kuryshev; Masafumi Shionyu; Kei Yura; Mitiko Go; Jean Thierry-Mieg; Danielle Thierry-Mieg; Stefan Wiemann; Nobuo Nomura; Sumio Sugano; Takashi Gojobori; Tadashi Imanishi
Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs.
Nucleic acids research 2006;34(14):3917-28.
2005: Chisato Yamasaki; Kanako O Koyanagi; Yasuyuki Fujii; Takeshi Itoh; Roberto Barrero; Takuro Tamura; Yumi Yamaguchi-Kabata; Motohiko Tanino; Jun-Ichi Takeda; Satoshi Fukuchi; Satoru Miyazaki; Nobuo Nomura; Sumio Sugano; Tadashi Imanishi; Takashi Gojobori
Investigation of protein functions through data-mining on integrated human transcriptome database, H-Invitational database (H-InvDB).
Gene 2005;364():99-107.
2005: Yasuyuki Fujii; Takeshi Itoh; Ryuichi Sakate; Kanako O Koyanagi; Akihiro Matsuya; Takuya Habara; Kaori Yamaguchi; Yayoi Kaneko; Takashi Gojobori; Tadashi Imanishi
A web tool for comparative genomics: G-compass.
Gene 2005;364():45-52.
2005: Motohiko Tanino; Yutaka Suzuki; Tadashi Imanishi; Teruyoshi Hishiki; Kousaku Okubo; Takashi Gojobori; Sumio Sugano
[Human transcriptome].
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 2005;50(16 Suppl):2059-64.
2005: Kanako O Koyanagi; Masato Hagiwara; Takeshi Itoh; Takashi Gojobori; Tadashi Imanishi
Comparative genomics of bidirectional gene pairs and its implications for the evolution of a transcriptional regulation system.
Gene 2005;353(2):169-76.
2005: Motohiko Tanino; Marie-Anne Debily; Takuro Tamura; Teruyoshi Hishiki; Osamu Ogasawara; Katsuji Murakawa; Shoko Kawamoto; Kouichi Itoh; Shinya Watanabe; Sandro J de Souza; Sandrine Imbeaud; Esther Graudens; Eric Eveno; Phillip Hilton; Yukio Sudo; Janet Kelso; Kazuho Ikeo; Tadashi Imanishi; Takashi Gojobori; Charles Auffray; Winston Hide; Kousaku Okubo
The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms.
Nucleic acids research 2005;33(Database issue):D567-72.
2004: Toshiko Matsumoto; Wataru Yukawa; Yasuyuki Nozaki; Ryo Nakashige; Minori Shinya; Satoshi Makino; Masaru Yagura; Tomoki Ikuta; Tadashi Imanishi; Hidetoshi Inoko; Gen Tamiya; Takashi Gojobori
Novel algorithm for automated genotyping of microsatellites.
Nucleic acids research 2004;32(20):6069-77.