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Francis Jenney

Research Profile

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Chemicals & Drugs

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Physiology

Gene Expression Regulation, Archaeal

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Publications

TOP 3
Saeed Kamali; Wolfgang Lubitz; Brian C Manor; Devrani Mitra; Hideaki Ogata; Thomas B Rauchfuss; Hongxin Wang; Yoshitaka Yoda; Jiyong Zhao; Michael W W Adams; E Ercan Alp; Violaine Bonnefoy; Deborah Byrne; Francis E Jenney; Stephen P Cramer
Observation of the Fe-CN and Fe-CO vibrations in the active site of [NiFe] hydrogenase by nuclear resonance vibrational spectroscopy.
Sanjeev K Chandrayan; R Christopher Hopkins; Francis E Jenney; Patrick M McTernan; Junsong Sun; Michael W W Adams
Engineering hyperthermophilic archaeon Pyrococcus furiosus to overproduce its cytoplasmic [NiFe]-hydrogenase.
Devrani Mitra; Vladimir Pelmenschikov; Ming-Liang Tan; Hongxin Wang; Yoshitaka Yoda; Jiyong Zhao; Weibing Dong; Yisong Guo; Toshiko Ichiye; Francis E Jenney; Michael W W Adams; David A Case; Stephen P Cramer
Dynamics of the [4Fe-4S] cluster in Pyrococcus furiosus D14C ferredoxin via nuclear resonance vibrational and resonance Raman spectroscopies, force field simulations, and density functional theory calculations.

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All Publications

2013: Saeed Kamali; Wolfgang Lubitz; Brian C Manor; Devrani Mitra; Hideaki Ogata; Thomas B Rauchfuss; Hongxin Wang; Yoshitaka Yoda; Jiyong Zhao; Michael W W Adams; E Ercan Alp; Violaine Bonnefoy; Deborah Byrne; Francis E Jenney; Stephen P Cramer
Observation of the Fe-CN and Fe-CO vibrations in the active site of [NiFe] hydrogenase by nuclear resonance vibrational spectroscopy.
Angewandte Chemie (International ed. in English) 2013;52(2):724-8.
2012: Sanjeev K Chandrayan; R Christopher Hopkins; Francis E Jenney; Patrick M McTernan; Junsong Sun; Michael W W Adams
Engineering hyperthermophilic archaeon Pyrococcus furiosus to overproduce its cytoplasmic [NiFe]-hydrogenase.
The Journal of biological chemistry 2012;287(5):3257-64.
2011: Devrani Mitra; Vladimir Pelmenschikov; Ming-Liang Tan; Hongxin Wang; Yoshitaka Yoda; Jiyong Zhao; Weibing Dong; Yisong Guo; Toshiko Ichiye; Francis E Jenney; Michael W W Adams; David A Case; Stephen P Cramer
Dynamics of the [4Fe-4S] cluster in Pyrococcus furiosus D14C ferredoxin via nuclear resonance vibrational and resonance Raman spectroscopies, force field simulations, and density functional theory calculations.
Biochemistry 2011;50(23):5220-35.
2011: R Christopher Hopkins; Francis E Jenney; Patrick M McTernan; Junsong Sun; Sanjeev K Chandrayan; Michael W W Adams
Homologous expression of a subcomplex of Pyrococcus furiosus hydrogenase that interacts with pyruvate ferredoxin oxidoreductase.
PloS one 2011;6(10):e26569.
2011: W Andrew Lancaster; Jeremy L Praissman; Farris L Poole; Aleksandar Cvetkovic; Angeli Lal Menon; Joseph W Scott; Francis E Jenney; Michael P Thorgersen; Ewa Kalisiak; Junefredo V Apon; Sunia A Trauger; Gary Siuzdak; John A Tainer; Michael W W Adams
A computational framework for proteome-wide pursuit and prediction of metalloproteins using ICP-MS and MS/MS data.
BMC bioinformatics 2011;12():64.
2010: Aleksandar Cvetkovic; Angeli Lal Menon; Michael P Thorgersen; Joseph W Scott; Farris L Poole; Francis E Jenney; W Andrew Lancaster; Jeremy L Praissman; Saratchandra Shanmukh; Brian J Vaccaro; Sunia A Trauger; Ewa Kalisiak; Junefredo V Apon; Gary Siuzdak; Steven M Yannone; John A Tainer; Michael W W Adams
Microbial metalloproteomes are largely uncharacterized.
Nature 2010;466(7307):779-82.
2010: Kari R Strand; Chengjun Sun; Ting Li; Francis E Jenney; Gerrit J Schut; Michael W W Adams
Oxidative stress protection and the repair response to hydrogen peroxide in the hyperthermophilic archaeon Pyrococcus furiosus and in related species.
Archives of microbiology 2010;192(6):447-59.
2010: Junsong Sun; Robert C Hopkins; Francis E Jenney; Patrick M McTernan; Michael W W Adams
Heterologous expression and maturation of an NADP-dependent [NiFe]-hydrogenase: a key enzyme in biofuel production.
PloS one 2010;5(5):e10526.
2009: Angeli Lal Menon; Farris L Poole; Aleksandar Cvetkovic; Sunia A Trauger; Ewa Kalisiak; Joseph W Scott; Saratchandra Shanmukh; Jeremy Praissman; Francis E Jenney; William R Wikoff; John V Apon; Gary Siuzdak; Michael W W Adams
Novel multiprotein complexes identified in the hyperthermophilic archaeon Pyrococcus furiosus by non-denaturing fractionation of the native proteome.
Molecular & cellular proteomics : MCP 2009;8(4):735-51.
2008: Francis E Jenney; Michael W W Adams
Hydrogenases of the model hyperthermophiles.
Annals of the New York Academy of Sciences 2008;1125():252-66.
2008: Francis E Jenney; Michael W W Adams
The impact of extremophiles on structural genomics (and vice versa).
Extremophiles : life under extreme conditions 2008;12(1):39-50.
2007: Giovanna Cacciapuoti; Marina Porcelli; Maria Angela Moretti; Francesca Sorrentino; Luigi Concilio; Vincenzo Zappia; Zhi-Jie Liu; Wolfram Tempel; Florian D Schubot; John P Rose; Bi-Cheng Wang; Phillip S Brereton; Francis E Jenney; Michael W W Adams
The first agmatine/cadaverine aminopropyl transferase: biochemical and structural characterization of an enzyme involved in polyamine biosynthesis in the hyperthermophilic archaeon Pyrococcus furiosus.
Journal of bacteriology 2007;189(16):6057-67.
2007: Laura-Lee Clancy Kelley; Bret D Dillard; Wolfram Tempel; Lirong Chen; Neil Shaw; Doowon Lee; M Gary Newton; Frank J Sugar; Francis E Jenney; Han Seung Lee; Claudia Shah; Farris L Poole; Michael W W Adams; Jane S Richardson; David C Richardson; Zhi-Jie Liu; Bi-Cheng Wang; John Rose
Structure of the hypothetical protein PF0899 from Pyrococcus furiosus at 1.85 A resolution.
Acta crystallographica. Section F, Structural biology and crystallization communications 2007;63(Pt 7):549-52.
2007: Brian Gerwe; Laura-Lee Clancy Kelley; Bret D Dillard; Thomas Lai; Zhi-Jie Liu; Wolfram Tempel; Lirong Chen; Jeff E Habel; Doowon Lee; Francis E Jenney; Frank J Sugar; Jane S Richardson; David C Richardson; M Gary Newton; Bi-Cheng Wang; Michael W W Adams; John P Rose
Structural and transcriptional analyses of a purine nucleotide-binding protein from Pyrococcus furiosus: a component of a novel, membrane-bound multiprotein complex unique to this hyperthermophilic archaeon.
Journal of structural and functional genomics 2007;8(1):1-10.
2007: Ming-Liang Tan; Anna Rita Bizzarri; Yuming Xiao; Salvatore Cannistraro; Toshiko Ichiye; Cristian Manzoni; Giulio Cerullo; Michael W W Adams; Francis E Jenney; Stephen P Cramer
Observation of terahertz vibrations in Pyrococcus furiosus rubredoxin via impulsive coherent vibrational spectroscopy and nuclear resonance vibrational spectroscopy--interpretation by molecular mechanics.
Journal of inorganic biochemistry 2007;101(3):375-84.
2007: Xu Wang; Han-Seung Lee; Frank J Sugar; Francis E Jenney; Michael W W Adams; James H Prestegard
PF0610, a novel winged helix-turn-helix variant possessing a rubredoxin-like Zn ribbon motif from the hyperthermophilic archaeon, Pyrococcus furiosus.
Biochemistry 2007;46(3):752-61.
2006: Tran-Chin Yang; Rebecca L McNaughton; Michael D Clay; Francis E Jenney; Rangan Krishnan; Donald M Kurtz; Michael W W Adams; Michael K Johnson; Brian M Hoffman
Comparing the electronic properties of the low-spin cyano-ferric [Fe(N4)(Cys)] active sites of superoxide reductase and p450cam using ENDOR spectroscopy and DFT calculations.
Journal of the American Chemical Society 2006;128(51):16566-78.
2006: KL Mayer; Y Qu; S Bansal; P D LeBlond; Francis E Jenney; Phillip S Brereton; Michael W W Adams; Ying Xu; James H Prestegard
Structure determination of a new protein from backbone-centered NMR data and NMR-assisted structure prediction.
Proteins 2006;65(2):480-9.
2006: Han-Seung Lee; Keith R Shockley; Gerrit J Schut; Shannon B Conners; Clemente I Montero; Matthew R Johnson; Chung-Jung Chou; Stephanie L Bridger; Nathan Wigner; Scott D Brehm; Francis E Jenney; Donald A Comfort; Robert M Kelly; Michael W W Adams
Transcriptional and biochemical analysis of starch metabolism in the hyperthermophilic archaeon Pyrococcus furiosus.
Journal of bacteriology 2006;188(6):2115-25.
2006: Michael D Clay; Tran-Chin Yang; Francis E Jenney; Irene Kung-Campbell; Christopher A Cosper; Rangan Krishnan; Donald M Kurtz; Michael W W Adams; Brian M Hoffman; Michael K Johnson
Geometries and electronic structures of cyanide adducts of the non-heme iron active site of superoxide reductases: vibrational and ENDOR studies.
Biochemistry 2006;45(2):427-38.
2005: Farris L Poole; Brian Gerwe; Robert C Hopkins; Gerrit J Schut; Michael V Weinberg; Francis E Jenney; Michael W W Adams
Defining genes in the genome of the hyperthermophilic archaeon Pyrococcus furiosus: implications for all microbial genomes.
Journal of bacteriology 2005;187(21):7325-32.
2005: Yuming Xiao; Hongxin Wang; Simon J George; Matt C Smith; Michael W W Adams; Francis E Jenney; Wolfgang Sturhahn; E Ercan Alp; Jiyong Zhao; Y Yoda; Abishek Dey; Edward I Solomon; Stephen P Cramer
Normal mode analysis of Pyrococcus furiosus rubredoxin via nuclear resonance vibrational spectroscopy (NRVS) and resonance raman spectroscopy.
Journal of the American Chemical Society 2005;127(42):14596-606.
2005: Amy M Grunden; Francis E Jenney; Kesen Ma; Mikyoung Ji; Michael V Weinberg; Michael W W Adams
In vitro reconstitution of an NADPH-dependent superoxide reduction pathway from Pyrococcus furiosus.
Applied and environmental microbiology 2005;71(3):1522-30.
2005: Sherry V Story; Claudia Shah; Francis E Jenney; Michael W W Adams
Characterization of a novel zinc-containing, lysine-specific aminopeptidase from the hyperthermophilic archaeon Pyrococcus furiosus.
Journal of bacteriology 2005;187(6):2077-83.
2005: Bi-Cheng Wang; Michael W W Adams; Harry A. Dailey; Lawrence J Delucas; Ming Luo; John Rose; Robert J Bunzel; Tamara A Dailey; Jeff E Habel; Peter Horanyi; Francis E Jenney; Irina A Kataeva; Han-Seung Lee; Songlin Li; Ting Li; Dawei Lin; Zhi-Jie Liu; Chi-Hao Luan; Michael Mayer; Lisa Nagy; M Gary Newton; Joseph Ng; Farris L Poole; Ashit Shah; Claudia Shah; Frank J Sugar; Hao Xu
Protein production and crystallization at SECSG -- an overview.
Journal of structural and functional genomics 2005;6(2-3):233-43.
2005: Frank J Sugar; Francis E Jenney; Farris L Poole; Phillip S Brereton; Michi Izumi; Claudia Shah; Michael W W Adams
Comparison of small- and large-scale expression of selected Pyrococcus furiosus genes as an aid to high-throughput protein production.
Journal of structural and functional genomics 2005;6(2-3):149-58.
2005: Robert A Scott; Jacob E Shokes; Nathaniel J Cosper; Francis E Jenney; Michael W W Adams
Bottlenecks and roadblocks in high-throughput XAS for structural genomics.
Journal of synchrotron radiation 2005;12(Pt 1):19-22.
2005: Francis E Jenney; Phillip S Brereton; M Izumi; Farris L Poole; Claudia Shah; Frank J Sugar; Han-Seung Lee; Michael W W Adams
High-throughput production of Pyrococcus furiosus proteins: considerations for metalloproteins.
Journal of synchrotron radiation 2005;12(Pt 1):8-12.
2004: Michael V Weinberg; Francis E Jenney; Xiaoyuan Cui; Michael W W Adams
Rubrerythrin from the hyperthermophilic archaeon Pyrococcus furiosus is a rubredoxin-dependent, iron-containing peroxidase.
Journal of bacteriology 2004;186(23):7888-95.
2004: Wolfram Tempel; Zhi-Jie Liu; Florian D Schubot; Ashit Shah; Michael V Weinberg; Francis E Jenney; W Bryan Arendall; Michael W W Adams; Jane S Richardson; David C Richardson; John P Rose; Bi-Cheng Wang
Structural genomics of Pyrococcus furiosus: X-ray crystallography reveals 3D domain swapping in rubrerythrin.
Proteins 2004;57(4):878-82.
2004: Homayoun Valafar; KL Mayer; Catherine M Bougault; P D LeBlond; Francis E Jenney; Phillip S Brereton; Michael W W Adams; James H Prestegard
Backbone solution structures of proteins using residual dipolar couplings: application to a novel structural genomics target.
Journal of structural and functional genomics 2004;5(4):241-54.
2003: Uwe Bergmann; Wolfgang Sturhahn; Donald E Linn; Francis E Jenney; Michael W W Adams; Kresimir Rupnik; Brian J Hales; E Ercan Alp; Aaron Mayse; Stephen P Cramer
Observation of Fe-H/D modes by nuclear resonant vibrational spectroscopy.
Journal of the American Chemical Society 2003;125(14):4016-7.
2003: Michael D Clay; Christopher A Cosper; Francis E Jenney; Michael W W Adams; Michael K Johnson
Nitric oxide binding at the mononuclear active site of reduced Pyrococcus furiosus superoxide reductase.
Proceedings of the National Academy of Sciences of the United States of America 2003;100(7):3796-801.
2002: Michael D Clay; Francis E Jenney; Hak Joon Noh; Peter-Leon Hagedoorn; Michael W W Adams; Michael K Johnson
Resonance Raman characterization of the mononuclear iron active-site vibrations and putative electron transport pathways in Pyrococcus furiosus superoxide reductase.
Biochemistry 2002;41(31):9833-41.
2002: Michael W W Adams; Francis E Jenney; Michael D Clay; Michael K Johnson
Superoxide reductase: fact or fiction?
Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry 2002;7(6):647-52.
2002: Michael D Clay; Francis E Jenney; Peter-Leon Hagedoorn; Graham Neil George; Michael W W Adams; Michael K Johnson
Spectroscopic studies of Pyrococcus furiosus superoxide reductase: implications for active-site structures and the catalytic mechanism.
Journal of the American Chemical Society 2002;124(5):788-805.
2001: ER Zartler; Francis E Jenney; Mark Terrell; Marly K Eidsness; Michael W W Adams; James H Prestegard
Structural basis for thermostability in aporubredoxins from Pyrococcus furiosus and Clostridium pasteurianum.
Biochemistry 2001;40(24):7279-90.
2001: Francis E Jenney; Michael W W Adams
Rubredoxin from Pyrococcus furiosus.
Methods in enzymology 2001;334():45-55.
2001: Michael W W Adams; James F Holden; Angeli Lal Menon; Gerrit J Schut; Amy M Grunden; C Hou; AM Hutchins; Francis E Jenney; Chaekyun Kim; Kesen Ma; Guangliang Pan; Roopali Roy; Rajat Sapra; Sherry V Story; MF Verhagen
Key role for sulfur in peptide metabolism and in regulation of three hydrogenases in the hyperthermophilic archaeon Pyrococcus furiosus.
Journal of bacteriology 2001;183(2):716-24.
1999: Francis E Jenney; MF Verhagen; X Cui; Michael W W Adams
Anaerobic microbes: oxygen detoxification without superoxide dismutase.
Science (New York, N.Y.) 1999;286(5438):306-9.
1999: P L Wang; Luigi Calzolai; K L Bren; Q Teng; Francis E Jenney; Phillip S Brereton; J B Howard; Michael W W Adams; Gerd N La Mar
Secondary structure extensions in Pyrococcus furiosus ferredoxin destabilize the disulfide bond relative to that in other hyperthermostable ferredoxins. Global consequences for the disulfide orientational heterogeneity.
Biochemistry 1999;38(25):8167-78.