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Morten Jensen

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Computer Simulation

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Lipid Bilayers

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Publications

TOP 3
Morten Ø Jensen; Vishwanath Jogini; Michael P Eastwood; David E Shaw
Atomic-level simulation of current-voltage relationships in single-file ion channels.
Morten Ø Jensen; Vishwanath Jogini; Abba E Leffler; David W Borhani; Ron O Dror; David E Shaw
Mechanism of voltage gating in potassium channels.
Thomas P Nygaard; Mercedes Alfonso-Prieto; Günther H Peters; Morten Ø Jensen; Carme Rovira
Substrate recognition in the Escherichia coli ammonia channel AmtB: a QM/MM investigation.

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All Publications

2013: Morten Ø Jensen; Vishwanath Jogini; Michael P Eastwood; David E Shaw
Atomic-level simulation of current-voltage relationships in single-file ion channels.
The Journal of general physiology 2013;141(5):619-32.
2012: Morten Ø Jensen; Vishwanath Jogini; Abba E Leffler; David W Borhani; Ron O Dror; David E Shaw
Mechanism of voltage gating in potassium channels.
Science (New York, N.Y.) 2012;336(6078):229-33.
2010: Thomas P Nygaard; Mercedes Alfonso-Prieto; Günther H Peters; Morten Ø Jensen; Carme Rovira
Substrate recognition in the Escherichia coli ammonia channel AmtB: a QM/MM investigation.
The journal of physical chemistry. B 2010;114(36):11859-65.
2010: Ron O Dror; Morten Ø Jensen; David W Borhani; David E Shaw
Exploring atomic resolution physiology on a femtosecond to millisecond timescale using molecular dynamics simulations.
The Journal of general physiology 2010;135(6):555-62.
2010: Morten Ø Jensen; David W Borhani; Kresten Lindorff-Larsen; Paul Maragakis; Vishwanath Jogini; Michael P Eastwood; Ron O Dror; David E Shaw
Principles of conduction and hydrophobic gating in K+ channels.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(13):5833-8.
2009: Himanshu Khandelia; Morten Ø Jensen; Ole G Mouritsen
To gate or not to gate: using molecular dynamics simulations to morph gated plant aquaporins into constitutively open conformations.
The journal of physical chemistry. B 2009;113(15):5239-44.
2009: Ron O Dror; Daniel H Arlow; David W Borhani; Morten Ø Jensen; Stefano Piana; David E Shaw
Identification of two distinct inactive conformations of the beta2-adrenergic receptor reconciles structural and biochemical observations.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(12):4689-94.
2009: Yibing Shan; Markus A Seeliger; Michael P Eastwood; Filipp Frank; Huafeng Xu; Morten Ø Jensen; Ron O Dror; John Kuriyan; David E Shaw
A conserved protonation-dependent switch controls drug binding in the Abl kinase.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(1):139-44.
2008: Morten Ø Jensen; Ron O Dror; Huafeng Xu; David W Borhani; Isaiah T Arkin; Michael P Eastwood; David E Shaw
Dynamic control of slow water transport by aquaporin 0: implications for hydration and junction stability in the eye lens.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(38):14430-5.
2008: Paul Maragakis; Kresten Lindorff-Larsen; Michael P Eastwood; Ron O Dror; John L Klepeis; Isaiah T Arkin; Morten Ø Jensen; Huafeng Xu; Nikola Trbovic; Richard A Friesner; Arthur G Palmer Iii; David E Shaw
Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins.
The journal of physical chemistry. B 2008;112(19):6155-8.
2008: Morten Ø Jensen; Henrik Jensen; Sten L Nielsen; Morten Smerup; Peter Johansen; Ajit P Yoganathan; Hans Nygaard; J Michael Hasenkam
What forces act on a flat rigid mitral annuloplasty ring?
The Journal of heart valve disease 2008;17(3):267-75; discussion 275.
2008: Henrik Jensen; Morten Ø Jensen; Steffen Ringgaard; Morten Smerup; Thomas S Sorensen; Won Y Kim; Erik Sloth; P Wierup; J Michael Hasenkam; Sten L Nielsen
Geometric determinants of chronic functional ischemic mitral regurgitation: insights from three-dimensional cardiac magnetic resonance imaging.
The Journal of heart valve disease 2008;17(1):16-22; discussion 23.
2007: Isaiah T Arkin; Huafeng Xu; Morten Ø Jensen; Eyal Arbely; Estelle R Bennett; Kevin J Bowers; Edmond Chow; Ron O Dror; Michael P Eastwood; Ravenna Flitman-Tene; Brent A Gregersen; John L Klepeis; István Kolossváry; Yibing Shan; David E Shaw
Mechanism of Na+/H+ antiporting.
Science (New York, N.Y.) 2007;317(5839):799-803.
2007: Morten Ø Jensen; Ying Yin; Emadeddin Emadeddin Tajkhorshid; Klaus Schulten
Sugar transport across lactose permease probed by steered molecular dynamics.
Biophysical journal 2007;93(1):92-102.
2007: Jacob Sonne; Morten Ø Jensen; Flemming Y Hansen; Lars Hemmingsen; Günther H Peters
Reparameterization of all-atom dipalmitoylphosphatidylcholine lipid parameters enables simulation of fluid bilayers at zero tension.
Biophysical journal 2007;92(12):4157-67.
2007: Jacob Sonne; Christian Kandt; Günther H Peters; Flemming Y Hansen; Morten Ø Jensen; D Peter Tieleman
Simulation of the coupling between nucleotide binding and transmembrane domains in the ATP binding cassette transporter BtuCD.
Biophysical journal 2007;92(8):2727-34.
2006: Thomas P Nygaard; Carme Rovira; Günther H Peters; Morten Ø Jensen
Ammonium recruitment and ammonia transport by E. coli ammonia channel AmtB.
Biophysical journal 2006;91(12):4401-12.
2006: Ying Yin; Morten Ø Jensen; Emadeddin Emadeddin Tajkhorshid; Klaus Schulten
Sugar binding and protein conformational changes in lactose permease.
Biophysical journal 2006;91(11):3972-85.
2006: Morten Ø Jensen; Ole G Mouritsen
Single-channel water permeabilities of Escherichia coli aquaporins AqpZ and GlpF.
Biophysical journal 2006;90(7):2270-84.
2005: Frederic N R Petersen; Morten Ø Jensen; Claus Helix-Nielsen
Interfacial tryptophan residues: a role for the cation-pi effect?
Biophysical journal 2005;89(6):3985-96.
2005: Tina B Pedersen; Thomas Kaasgaard; Morten Ø Jensen; Sven Frokjaer; Ole G Mouritsen; Kent Jørgensen
Phase behavior and nanoscale structure of phospholipid membranes incorporated with acylated C14-peptides.
Biophysical journal 2005;89(4):2494-503.
2005: Morten Ø Jensen; Ursula Röthlisberger; Carme Rovira
Hydroxide and proton migration in aquaporins.
Biophysical journal 2005;89(3):1744-59.
2004: Morten Ø Jensen; Ole G Mouritsen
Lipids do influence protein function-the hydrophobic matching hypothesis revisited.
Biochimica et biophysica acta 2004;1666(1-2):205-26.
2004: Morten Ø Jensen; Ole G Mouritsen; Günther H Peters
Simulations of a membrane-anchored peptide: structure, dynamics, and influence on bilayer properties.
Biophysical journal 2004;86(6):3556-75.
2004: Morten Ø Jensen; Ole G Mouritsen; Günther H Peters
The hydrophobic effect: molecular dynamics simulations of water confined between extended hydrophobic and hydrophilic surfaces.
The Journal of chemical physics 2004;120(20):9729-44.
2003: Morten Ø Jensen; Emadeddin Emadeddin Tajkhorshid; Klaus Schulten
Electrostatic tuning of permeation and selectivity in aquaporin water channels.
Biophysical journal 2003;85(5):2884-99.
2003: Bjørn G Nielsen; Morten Ø Jensen; Henrik Bohr
The probability distribution of side-chain conformations in [Leu] and [Met]enkephalin determines the potency and selectivity to mu and delta opiate receptors.
Biopolymers 2003;71(5):577-92.
2002: Morten Ø Jensen; Torben R Jensen; Kristian Kjaer; Thomas Bjørnholm; Ole G Mouritsen; Günther H Peters
Orientation and conformation of a lipase at an interface studied by molecular dynamics simulations.
Biophysical journal 2002;83(1):98-111.
2002: Morten Ø Jensen; Sanghyun Park; Emadeddin Emadeddin Tajkhorshid; Klaus Schulten
Energetics of glycerol conduction through aquaglyceroporin GlpF.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(10):6731-6.
2002: Emadeddin Emadeddin Tajkhorshid; peter nollert; Morten Ø Jensen; Larry J W Miercke; Joseph O'Connell; Robert M Stroud; Klaus Schulten
Control of the selectivity of the aquaporin water channel family by global orientational tuning.
Science (New York, N.Y.) 2002;296(5567):525-30.
2001: Morten Ø Jensen; Ole G Mouritsen; Günther H Peters
Dipolar and chain-linking effects on the rheology of grafted chains in a nanopore under shear at different grafting densities.
Physical review. E, Statistical, nonlinear, and soft matter physics 2001;64(1 Pt 1):011507.