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David Jones

Research Profile

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Zebrafishes

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TOP 3
Saher Sue Hammoud; Bradley R Cairns; David A Jones
Epigenetic regulation of colon cancer and intestinal stem cells.
Angela Andersen; David A Jones
APC and DNA demethylation in cell fate specification and intestinal cancer.
Suzanne Ridges; Ali Sanati; Matthew Sigman; Hossein Sofla; Gerald J Spangrude; Seth Welborn; Archana Agarwal; Kaveri Balan; Lance Batchelor; Henry Choi; Priya Choudhry; James E Cox; Michael Deininger; Anna Eiring; J Kimble Frazer; Cynthia J Guidos; Will L Heaton; Radia Johnson; David A Jones; Deepa Joshi; Elizabeth J Manos; Rodney R Miles; Bertrand Montpellier; Markus Müschen; Tatiana Perova; Nikolaus S Trede
Zebrafish screen identifies novel compound with selective toxicity against leukemia.

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All Publications

2013: Saher Sue Hammoud; Bradley R Cairns; David A Jones
Epigenetic regulation of colon cancer and intestinal stem cells.
Current opinion in cell biology 2013;25(2):177-83.
2013: Angela Andersen; David A Jones
APC and DNA demethylation in cell fate specification and intestinal cancer.
Advances in experimental medicine and biology 2013;754():167-77.
2012: Suzanne Ridges; Ali Sanati; Matthew Sigman; Hossein Sofla; Gerald J Spangrude; Seth Welborn; Archana Agarwal; Kaveri Balan; Lance Batchelor; Henry Choi; Priya Choudhry; James E Cox; Michael Deininger; Anna Eiring; J Kimble Frazer; Cynthia J Guidos; Will L Heaton; Radia Johnson; David A Jones; Deepa Joshi; Elizabeth J Manos; Rodney R Miles; Bertrand Montpellier; Markus Müschen; Tatiana Perova; Nikolaus S Trede
Zebrafish screen identifies novel compound with selective toxicity against leukemia.
Blood 2012;119(24):5621-31.
2012: Jessica Maddox; Arvind Shakya; Dawne Shelton; Samuel South; Gerald J Spangrude; Jared N Andersen; Stephanie Chidester; Keith M Gligorich; David A Jones; Jinsuk Kang; Bryan E Welm; Dean Tantin
Transcription factor Oct1 is a somatic and cancer stem cell determinant.
PLoS genetics 2012;8(11):e1003048.
2011: Shan-Fu Wu; Haiying Zhang; Saher Sue Hammoud; David A Jones; David A Nix; Magdalena Potok; Bradley R Cairns
DNA methylation profiling in zebrafish.
Methods in cell biology 2011;104():327-39.
2010: Kunal Rai; Sharmistha Sarkar; Talmage J Broadbent; Matthew Voas; Kenneth F Grossmann; Lincoln D Nadauld; Somaye Dehghanizadeh; Fanuel T Hagos; Yumei Li; Rachel K Toth; Stephanie Chidester; Timothy M Bahr; W Evan Johnson; Brad Sklow; Randall Burt; Bradley R Cairns; David A Jones
DNA demethylase activity maintains intestinal cells in an undifferentiated state following loss of APC.
Cell 2010;142(6):930-42.
2010: Kunal Rai; Itrat F Jafri; Stephanie Chidester; Smitha R James; Adam R Karpf; Bradley R Cairns; David A Jones
Dnmt3 and G9a cooperate for tissue-specific development in zebrafish.
The Journal of biological chemistry 2010;285(6):4110-21.
2010: Xiaomei Wei; Tim S Bugni; Mary Kay Harper; Imelda T Sandoval; Elizabeth J Manos; Jennifer Swift; Ryan M Van Wagoner; David A Jones; Chris M Ireland
Evaluation of pyridoacridine alkaloids in a zebrafish phenotypic assay.
Marine drugs 2010;8(6):1769-78.
2009: Reid A Phelps; Talmage J Broadbent; Diana M Stafforini; David A Jones
New perspectives on APC control of cell fate and proliferation in colorectal cancer.
Cell cycle (Georgetown, Tex.) 2009;8(16):2549-56.
2009: Reid A Phelps; Stephanie Chidester; Somaye Dehghanizadeh; Jason Phelps; Imelda T Sandoval; Kunal Rai; Talmage Broadbent; Sharmistha Sarkar; Randall W Burt; David A Jones
A two-step model for colon adenoma initiation and progression caused by APC loss.
Cell 2009;137(4):623-34.
2008: Kunal Rai; Ian J Huggins; Smitha R James; Adam R Karpf; David A Jones; Bradley R Cairns
DNA demethylation in zebrafish involves the coupling of a deaminase, a glycosylase, and gadd45.
Cell 2008;135(7):1201-12.
2008: Petra A Link; Maria R Baer; Smitha R James; David A Jones; Adam R Karpf
p53-inducible ribonucleotide reductase (p53R2/RRM2B) is a DNA hypomethylation-independent decitabine gene target that correlates with clinical response in myelodysplastic syndrome/acute myelogenous leukemia.
Cancer research 2008;68(22):9358-66.
2007: Annie L Eisinger; Lincoln D Nadauld; Dawne N Shelton; Stephen M Prescott; Diana M Stafforini; David A Jones
Retinoic acid inhibits beta-catenin through suppression of Cox-2: a role for truncated adenomatous polyposis coli.
The Journal of biological chemistry 2007;282(40):29394-400.
2007: Kunal Rai; Stephanie Chidester; Chad V Zavala; Elizabeth J Manos; Smitha R James; Adam R Karpf; David A Jones; Bradley R Cairns
Dnmt2 functions in the cytoplasm to promote liver, brain, and retina development in zebrafish.
Genes & development 2007;21(3):261-6.
2007: Annie L Eisinger; Stephen M Prescott; David A Jones; Diana M Stafforini
The role of cyclooxygenase-2 and prostaglandins in colon cancer.
Prostaglandins & other lipid mediators 2007;82(1-4):147-54.
2006: Lincoln D Nadauld; Reid Phelps; Brent C Moore; Annie L Eisinger; Imelda T Sandoval; Stephanie Chidester; Peter W Peterson; Elizabeth J Manos; Bradford Sklow; Randall W Burt; David A Jones
Adenomatous polyposis coli control of C-terminal binding protein-1 stability regulates expression of intestinal retinol dehydrogenases.
The Journal of biological chemistry 2006;281(49):37828-35.
2006: Kunal Rai; Lincoln D Nadauld; Stephanie Chidester; Elizabeth J Manos; Smitha R James; Adam R Karpf; Bradley R Cairns; David A Jones
Zebra fish Dnmt1 and Suv39h1 regulate organ-specific terminal differentiation during development.
Molecular and cellular biology 2006;26(19):7077-85.
2006: Lincoln D Nadauld; Stephanie Chidester; Dawne N Shelton; Kunal Rai; Talmage Broadbent; Imelda T Sandoval; Peter W Peterson; Elizabeth J Manos; Chris M Ireland; H Joseph Yost; David A Jones
Dual roles for adenomatous polyposis coli in regulating retinoic acid biosynthesis and Wnt during ocular development.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(36):13409-14.
2006: Dawne N Shelton; Imelda T Sandoval; Annie L Eisinger; Stephanie Chidester; Anokha S Ratnayake; Chris M Ireland; David A Jones
Up-regulation of CYP26A1 in adenomatous polyposis coli-deficient vertebrates via a WNT-dependent mechanism: implications for intestinal cell differentiation and colon tumor development.
Cancer research 2006;66(15):7571-7.
2006: Annie L Eisinger; Lincoln D Nadauld; Dawne N Shelton; Peter W Peterson; Reid A Phelps; Stephanie Chidester; Diana M Stafforini; Stephen M Prescott; David A Jones
The adenomatous polyposis coli tumor suppressor gene regulates expression of cyclooxygenase-2 by a mechanism that involves retinoic acid.
The Journal of biological chemistry 2006;281(29):20474-82.
2005: Lincoln D Nadauld; Dawne N Shelton; Stephanie Chidester; H Joseph Yost; David A Jones
The zebrafish retinol dehydrogenase, rdh1l, is essential for intestinal development and is regulated by the tumor suppressor adenomatous polyposis coli.
The Journal of biological chemistry 2005;280(34):30490-5.
2005: Wolfram E Samlowski; Sancy A Leachman; Mark Wade; Pamela Cassidy; Patricia Porter-Gill; Leslie Busby; Richard Wheeler; Kenneth M Boucher; Frank A Fitzpatrick; David A Jones; Adam R Karpf
Evaluation of a 7-day continuous intravenous infusion of decitabine: inhibition of promoter-specific and global genomic DNA methylation.
Journal of clinical oncology : official journal of the American Society of Clinical Oncology 2005;23(17):3897-905.
2004: Lincoln D Nadauld; Imelda T Sandoval; Stephanie Chidester; H Joseph Yost; David A Jones
Adenomatous polyposis coli control of retinoic acid biosynthesis is critical for zebrafish intestinal development and differentiation.
The Journal of biological chemistry 2004;279(49):51581-9.
2004: Asmaa Mamoune; Jareer Kassis; Sourabh Kharait; Susanne Kloeker; Elizabeth J Manos; David A Jones; Alan Wells
DU145 human prostate carcinoma invasiveness is modulated by urokinase receptor (uPAR) downstream of epidermal growth factor receptor (EGFR) signaling.
Experimental cell research 2004;299(1):91-100.
2004: Cicely Jette; Peter W Peterson; Imelda T Sandoval; Elizabeth J Manos; Eryn Hadley; Chris M Ireland; David A Jones
The tumor suppressor adenomatous polyposis coli and caudal related homeodomain protein regulate expression of retinol dehydrogenase L.
The Journal of biological chemistry 2004;279(33):34397-405.
2004: Susanne Kloeker; Michael Ben Major; David A Calderwood; Mark H Ginsberg; David A Jones; Mary C Beckerle
The Kindler syndrome protein is regulated by transforming growth factor-beta and involved in integrin-mediated adhesion.
The Journal of biological chemistry 2004;279(8):6824-33.
2004: Michael Ben Major; David A Jones
Identification of a gadd45beta 3' enhancer that mediates SMAD3- and SMAD4-dependent transcriptional induction by transforming growth factor beta.
The Journal of biological chemistry 2004;279(7):5278-87.
2004: Peter C. Hollenhorst; David A Jones; Barbara J Graves
Expression profiles frame the promoter specificity dilemma of the ETS family of transcription factors.
Nucleic acids research 2004;32(18):5693-702.
2004: Adam R Karpf; Amy W Lasek; Ted O Ririe; Adrianne N Hanks; Douglas Grossman; David A Jones
Limited gene activation in tumor and normal epithelial cells treated with the DNA methyltransferase inhibitor 5-aza-2'-deoxycytidine.
Molecular pharmacology 2004;65(1):18-27.
2003: Aniko Szabo; Kenneth M Boucher; David A Jones; Alexander Tsodikov; Lev Klebanov; Andrei Y Yakovlev
Multivariate exploratory tools for microarray data analysis.
Biostatistics (Oxford, England) 2003;4(4):555-67.
2003: Kimberly A Kelly; David A Jones
Isolation of a colon tumor specific binding peptide using phage display selection.
Neoplasia (New York, N.Y.) 2003;5(5):437-44.
2003: Robyn D James; David A Jones; William Aalbersberg; Chris M Ireland
Naamidine A intensifies the phosphotransferase activity of extracellular signal-regulated kinases causing A-431 cells to arrest in G1.
Molecular cancer therapeutics 2003;2(8):747-51.
2002: Adam R Karpf; David A Jones
Reactivating the expression of methylation silenced genes in human cancer.
Oncogene 2002;21(35):5496-503.
2002: Alexander Tsodikov; A Szabo; David A Jones
Adjustments and measures of differential expression for microarray data.
Bioinformatics (Oxford, England) 2002;18(2):251-60.
2001: Elizabeth J Manos; M L Kim; J Kassis; P Y Chang; Alan Wells; David A Jones
Dolichol-phosphate-mannose-3 (DPM3)/prostin-1 is a novel phospholipase C-gamma regulated gene negatively associated with prostate tumor invasion.
Oncogene 2001;20(22):2781-90.
2001: Adam R Karpf; B C Moore; Ted O Ririe; David A Jones
Activation of the p53 DNA damage response pathway after inhibition of DNA methyltransferase by 5-aza-2'-deoxycytidine.
Molecular pharmacology 2001;59(4):751-7.
2001: Scott R Florell; Cheryl M Coffin; Joseph A Holden; J W Zimmermann; John W Gerwels; B K Summers; David A Jones; Sancy A Leachman
Preservation of RNA for functional genomic studies: a multidisciplinary tumor bank protocol.
Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc 2001;14(2):116-28.
2001: Elizabeth J Manos; David A Jones
Assessment of tumor necrosis factor receptor and Fas signaling pathways by transcriptional profiling.
Cancer research 2001;61(2):433-8.
2000: Kimberly A Kelly; E Manos; G Jensen; L Nadauld; David A Jones
APRIL/TRDL-1, a tumor necrosis factor-like ligand, stimulates cell death.
Cancer research 2000;60(4):1021-7.
1999: Adam R Karpf; Peter W Peterson; J T Rawlins; B K Dalley; Q Yang; Hans Albertsen; David A Jones
Inhibition of DNA methyltransferase stimulates the expression of signal transducer and activator of transcription 1, 2, and 3 genes in colon tumor cells.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(24):14007-12.
1999: David A Jones; F A Fitzpatrick
Genomics and the discovery of new drug targets.
Current opinion in chemical biology 1999;3(1):71-6.
1998: Hartmut Jaeschke; MA Fisher; JA Lawson; CA Simmons; Anwar Farhood; David A Jones
Activation of caspase 3 (CPP32)-like proteases is essential for TNF-alpha-induced hepatic parenchymal cell apoptosis and neutrophil-mediated necrosis in a murine endotoxin shock model.
Journal of immunology (Baltimore, Md. : 1950) 1998;160(7):3480-6.
1998: C W Benjamin; R R Hiebsch; David A Jones
Caspase activation in MCF7 cells responding to etoposide treatment.
Molecular pharmacology 1998;53(3):446-50.
1997: K C Chou; David A Jones; R L Heinrikson
Prediction of the tertiary structure and substrate binding site of caspase-8.
FEBS letters 1997;419(1):49-54.
1997: David A Jones; C W Benjamin
Phosphorylation of growth factor receptor binding protein-2 by pp60c-src tyrosine kinase.
Archives of biochemistry and biophysics 1997;337(2):143-8.
1996: D W Harris; M K Kenrick; R J Pither; J G Anson; David A Jones
Development of a high-volume in situ mRNA hybridization assay for the quantification of gene expression utilizing scintillating microplates.
Analytical biochemistry 1996;243(2):249-56.
1996: C J Mills; J L Northrup; T G Hullinger; CA Simmons; R J Shebuski; David A Jones
Temporal expression of c-fos mRNA following balloon injury in the rat common carotid artery.
Cardiovascular research 1996;32(5):954-61.
1996: W Kutchera; David A Jones; Nori Matsunami; Joanna Groden; Thomas M McIntyre; Guy A Zimmerman; Raymond White; Stephen M Prescott
Prostaglandin H synthase 2 is expressed abnormally in human colon cancer: evidence for a transcriptional effect.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(10):4816-20.
1995: J M Heery; M Kozak; Diana M Stafforini; David A Jones; Guy A Zimmerman; Thomas M McIntyre; Stephen M Prescott
Oxidatively modified LDL contains phospholipids with platelet-activating factor-like activity and stimulates the growth of smooth muscle cells.
The Journal of clinical investigation 1995;96(5):2322-30.
1995: David A Jones; C W Benjamin; D A Linseman
Activation of thromboxane and prostacyclin receptors elicits opposing effects on vascular smooth muscle cell growth and mitogen-activated protein kinase signaling cascades.
Molecular pharmacology 1995;48(5):890-6.
1995: D A Linseman; J A Lawson; David A Jones; J H Ludens
Glyburide attenuates calmodulin antagonist-stimulated renin release from isolated mouse juxtaglomerular cells.
The American journal of physiology 1995;269(2 Pt 2):F242-7.
1995: D A Linseman; C W Benjamin; David A Jones
Convergence of angiotensin II and platelet-derived growth factor receptor signaling cascades in vascular smooth muscle cells.
The Journal of biological chemistry 1995;270(21):12563-8.
1995: Joanna Groden; G Joslyn; Wade S Samowitz; David A Jones; N Bhattacharyya; Lisa N Spirio; A Thliveris; M Robertson; S Egan; Mark Meuth
Response of colon cancer cell lines to the introduction of APC, a colon-specific tumor suppressor gene.
Cancer research 1995;55(7):1531-9.
1994: C W Benjamin; D A Linseman; David A Jones
Platelet-derived growth factor stimulates phosphorylation of growth factor receptor-binding protein-2 in vascular smooth muscle cells.
The Journal of biological chemistry 1994;269(50):31346-9.
1994: C W Benjamin; David A Jones
Platelet-derived growth factor stimulates growth factor receptor binding protein-2 association with Shc in vascular smooth muscle cells.
The Journal of biological chemistry 1994;269(49):30911-6.
1993: K D Patel; E Lorant; David A Jones; M Prescott; Thomas M McIntyre; Guy A Zimmerman
Juxtacrine interactions of endothelial cells with leukocytes: tethering and signaling molecules.
Behring Institute Mitteilungen 1993;(92):144-64.
1993: David A Jones; David P Carlton; Thomas M McIntyre; Guy A Zimmerman; Stephen M Prescott
Molecular cloning of human prostaglandin endoperoxide synthase type II and demonstration of expression in response to cytokines.
The Journal of biological chemistry 1993;268(12):9049-54.
1991: David A Jones; F A Fitzpatrick
Thromboxane A2 synthase. Modification during "suicide" inactivation.
The Journal of biological chemistry 1991;266(34):23510-4.
1991: David A Jones; F A Fitzpatrick; K C Malcolm
Thromboxane A2 synthesis in human erythroleukemia cells.
Biochemical and biophysical research communications 1991;180(1):8-14.
1991: David A Jones; J Glod; D Wilson-Shaw; W E Hahn; James M Sikela
cDNA sequence and differential expression of the mouse Ca2+/calmodulin-dependent protein kinase IV gene.
FEBS letters 1991;289(1):105-9.
1991: F A Fitzpatrick; David A Jones; S Winitz; H T Fish
Mechanism-based inactivation of thromboxane A2 synthase.
Advances in prostaglandin, thromboxane, and leukotriene research 1991;21A():161-3.
1990: David A Jones; F A Fitzpatrick
"Suicide" inactivation of thromboxane A2 synthase. Characteristics of mechanism-based inactivation with isolated enzyme and intact platelets.
The Journal of biological chemistry 1990;265(33):20166-71.
1990: L Orning; David A Jones; F A Fitzpatrick
Mechanism-based inactivation of leukotriene A4 hydrolase during leukotriene B4 formation by human erythrocytes.
The Journal of biological chemistry 1990;265(25):14911-6.