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Keith Jones

Research Profile

Genes & Molecular Sequences

Devices

Oligonucleotide Array Sequence Analysis

Physiology

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TOP 3
Katsunori Fujii; Shumpei Ishikawa; Hideki Uchikawa; Daisuke Komura; Michael H Shapero; Fan Shen; Jing Hung; Hiroshi Arai; Yoko Tanaka; Kimio Sasaki; Yoichi Kohno; Masao Yamada; Keith W Jones; Hiroyuki Aburatani; Toshiyuki Miyashita
High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome.
Daisuke Komura; Fan Shen; Shumpei Ishikawa; Karen R Fitch; Wenwei Chen; Jane Zhang; Guoying Liu; Sayoko Ihara; Hiroshi Nakamura; Matthew E Hurles; Charles Lee; Stephen W Scherer; Keith W Jones; Michael H Shapero; Jing Huang; Hiroyuki Aburatani
Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays.
Jennifer L Freeman; George H Perry; Lars Feuk; Richard Redon; Steven A McCarroll; David Altshuler; Hiroyuki Aburatani; Keith W Jones; Chris Tyler-Smith; Matthew E Hurles; Nigel P Carter; Stephen W Scherer; Charles Lee
Copy number variation: new insights in genome diversity.

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All Publications

2007: Katsunori Fujii; Shumpei Ishikawa; Hideki Uchikawa; Daisuke Komura; Michael H Shapero; Fan Shen; Jing Hung; Hiroshi Arai; Yoko Tanaka; Kimio Sasaki; Yoichi Kohno; Masao Yamada; Keith W Jones; Hiroyuki Aburatani; Toshiyuki Miyashita
High-density oligonucleotide array with sub-kilobase resolution reveals breakpoint information of submicroscopic deletions in nevoid basal cell carcinoma syndrome.
Human genetics 2007;122(5):459-66.
2006: Daisuke Komura; Fan Shen; Shumpei Ishikawa; Karen R Fitch; Wenwei Chen; Jane Zhang; Guoying Liu; Sayoko Ihara; Hiroshi Nakamura; Matthew E Hurles; Charles Lee; Stephen W Scherer; Keith W Jones; Michael H Shapero; Jing Huang; Hiroyuki Aburatani
Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays.
Genome research 2006;16(12):1575-84.
2006: Jennifer L Freeman; George H Perry; Lars Feuk; Richard Redon; Steven A McCarroll; David Altshuler; Hiroyuki Aburatani; Keith W Jones; Chris Tyler-Smith; Matthew E Hurles; Nigel P Carter; Stephen W Scherer; Charles Lee
Copy number variation: new insights in genome diversity.
Genome research 2006;16(8):949-61.
2006: Penelope E Bonnen; Itsik Pe'er; Robert M Plenge; Jacqueline Salit; Jennifer K Lowe; Michael H Shapero; Richard P Lifton; Jan L Breslow; Mark J Daly; David E Reich; Keith W Jones; Markus Stoffel; David Altshuler; Jeffrey M Friedman
Evaluating potential for whole-genome studies in Kosrae, an isolated population in Micronesia.
Nature genetics 2006;38(2):214-7.
2006: Daisuke Komura; Kunihiro Nishimura; Shumpei Ishikawa; Binaya Panda; Jing Huang; Hiroshi Nakamura; Sayoko Ihara; Michitaka Hirose; Keith W Jones; Hiroyuki Aburatani
Noise reduction from genotyping microarrays using probe level information.
In silico biology 2006;6(1-2):79-92.
2006: Jing Huang; Wen Wei; Joyce Chen; Jane Zhang; Guoying Liu; Xiaojun Di; Rui Mei; Shumpei Ishikawa; Hiroyuki Aburatani; Keith W Jones; Michael H Shapero
CARAT: a novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays.
BMC bioinformatics 2006;7():83.
2005: Shumpei Ishikawa; Daisuke Komura; Shingo Tsuji; Kunihiro Nishimura; Shogo Yamamoto; Binaya Panda; Jing Huang; Masashi Fukayama; Keith W Jones; Hiroyuki Aburatani
Allelic dosage analysis with genotyping microarrays.
Biochemical and biophysical research communications 2005;333(4):1309-14.
2005: Mark D Shriver; Rui Mei; Esteban J Parra; Vibhor Sonpar; INDRANI HALDER; Sarah A Tishkoff; Theodore G Schurr; Sergev I Zhadanov; Ludmila P Osipova; Tom D Brutsaert; Jonathan Friedlaender; Lynn B Jorde; W Scott Watkins; Michael Bamshad; Gerardo Gutierrez; Halina Loi; Hajime Matsuzaki; Rick Kittles; George Argyropoulos; Jose R Fernandez; Joshua M Akey; Keith W Jones
Large-scale SNP analysis reveals clustered and continuous patterns of human genetic variation.
Human genomics 2005;2(2):81-9.
2005: Xiaojun Di; Hajime Matsuzaki; Teresa A Webster; Earl Hubbell; Guoying Liu; Shoulian Dong; Dan Bartell; Jing Huang; Richard Chiles; Geoffrey Yang; Mei-mei Shen; David Kulp; Giulia C Kennedy; Rui Mei; Keith W Jones; Simon Cawley
Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays.
Bioinformatics (Oxford, England) 2005;21(9):1958-63.
2004: Hajime Matsuzaki; Shoulian Dong; Halina Loi; Xiaojun Di; Guoying Liu; Earl Hubbell; Jane Law; Tam Berntsen; Monica Chadha; Henry Hui; Geoffrey Yang; Giulia C Kennedy; Teresa A Webster; Simon Cawley; P Sean Walsh; Keith W Jones; Stephen P A Fodor; Rui Mei
Genotyping over 100,000 SNPs on a pair of oligonucleotide arrays.
Nature methods 2004;1(2):109-11.
2004: Sally John; Neil Shephard; Guoying Liu; Eleftheria Zeggini; Manqiu Cao; Wenwei Chen; Nisha Vasavda; Tracy Mills; Anne Barton; Anne Hinks; Stephen Eyre; Keith W Jones; W E R Ollier; Alan Silman; Neil Gibson; Jane Worthington; Giulia C Kennedy
Whole-genome scan, in a complex disease, using 11,245 single-nucleotide polymorphisms: comparison with microsatellites.
American journal of human genetics 2004;75(1):54-64.
2004: Jing Huang; Wen Wei; Jane Zhang; Guoying Liu; Graham R Bignell; Michael R Stratton; P Andrew Futreal; Richard Wooster; Keith W Jones; Michael H Shapero
Whole genome DNA copy number changes identified by high density oligonucleotide arrays.
Human genomics 2004;1(4):287-99.
2004: Mark D Shriver; Giulia C Kennedy; Esteban J Parra; Heather A Lawson; Vibhor Sonpar; Jing Huang; Joshua M Akey; Keith W Jones
The genomic distribution of population substructure in four populations using 8,525 autosomal SNPs.
Human genomics 2004;1(4):274-86.
2004: Hajime Matsuzaki; Halina Loi; Shoulian Dong; Ya-Yu Tsai; Joy Fang; Jane Law; Xiaojun Di; Wei-Min Liu; Geoffrey Yang; Guoying Liu; Jing Huang; Giulia C Kennedy; Thomas B Ryder; Gregory A Marcus; P Sean Walsh; Mark D Shriver; Jennifer M Puck; Keith W Jones; Rui Mei
Parallel genotyping of over 10,000 SNPs using a one-primer assay on a high-density oligonucleotide array.
Genome research 2004;14(3):414-25.
2004: Graham R Bignell; Jing Huang; Joel Greshock; Stephen Watt; Adam Butler; Sofie West; Mira Grigorova; Keith W Jones; Wen Wei; Michael R Stratton; P Andrew Futreal; Barbara Weber; Michael H Shapero; Richard Wooster
High-resolution analysis of DNA copy number using oligonucleotide microarrays.
Genome research 2004;14(2):287-95.
2004: Michael H Shapero; Jane Zhang; Ann Loraine; Weiwei Liu; Xiaojun Di; Guoying Liu; Keith W Jones
MARA: a novel approach for highly multiplexed locus-specific SNP genotyping using high-density DNA oligonucleotide arrays.
Nucleic acids research 2004;32(22):e181.
2003: Wei-Min Liu; Xiaojun Di; Geoffrey Yang; Hajime Matsuzaki; Jing Huang; Rui Mei; Thomas B Ryder; Teresa A Webster; Shoulian Dong; Guoying Liu; Keith W Jones; Giulia C Kennedy; David Kulp
Algorithms for large-scale genotyping microarrays.
Bioinformatics (Oxford, England) 2003;19(18):2397-403.
2003: Giulia C Kennedy; Hajime Matsuzaki; Shoulian Dong; Wei-min Liu; Jing Huang; Guoying Liu; Xing Su; Manqiu Cao; Wenwei Chen; Jane Zhang; Weiwei Liu; Geoffrey Yang; Xiaojun Di; Thomas B Ryder; Zhijun He; Urvashi Surti; Michael S Phillips; michael Boyce-jacino; Stephen P A Fodor; Keith W Jones
Large-scale genotyping of complex DNA.
Nature biotechnology 2003;21(10):1233-7.
2001: Michael H Shapero; K K Leuther; A Nguyen; M Scott; Keith W Jones
SNP genotyping by multiplexed solid-phase amplification and fluorescent minisequencing.
Genome research 2001;11(11):1926-34.