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Hideki Kandori

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Procedures

Fourier Transform Infrared Spectroscopy

Chemicals & Drugs

Phenomena

Occupations

Photochemistry

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Co-Publications
Name
29
Maeda, A
28
Shichida, Yoshinori
23
Furutani, Yuji
16
Lanyi, Janos
16
Needleman, Richard
11
Tokutomi, Satoru
11
Yamazaki, Y
10
Sasaki, Jun
9
Shibata, Mikihiro
9
Iwata, Tatsuya
8
Kamo, Naoki
8
Sudo, Yuki
7
Herzfeld, Judith
7
Brown, Leonid
6
Furutani, Yuji

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Publications

TOP 3
Kawanabe Akira; Furutani Yuji; Jung Kwang-Hwan; Kandori Hideki
Engineering an inward proton transport from a bacterial sensor rhodopsin.
Sudo Yuki; Okada Akiko; Suzuki Daisuke; Inoue Keiichi; Irieda Hiroki; Sakai Makoto; Fujii Masaaki; Furutani Yuji; Kandori Hideki; Homma Michio
characterization of a signaling complex composed of sensory rhodopsin I and its cognate transducer protein from the eubacterium Salinibacter ruber.
Suzuki Daisuke; Furutani Yuji; Inoue Keiichi; Kikukawa Takashi; Sakai Makoto; Fujii Masaaki; Kandori Hideki; Homma Michio; Sudo Yuki
Effects of chloride ion binding on the photochemical properties of salinibacter sensory rhodopsin I.

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All Publications

2009: Kawanabe Akira; Furutani Yuji; Jung Kwang-Hwan; Kandori Hideki
Engineering an inward proton transport from a bacterial sensor rhodopsin.
Journal of the American Chemical Society 2009;131(45):16439-44.
2009: Sudo Yuki; Okada Akiko; Suzuki Daisuke; Inoue Keiichi; Irieda Hiroki; Sakai Makoto; Fujii Masaaki; Furutani Yuji; Kandori Hideki; Homma Michio
characterization of a signaling complex composed of sensory rhodopsin I and its cognate transducer protein from the eubacterium Salinibacter ruber.
Biochemistry 2009;48(42):10136-45.
2009: Suzuki Daisuke; Furutani Yuji; Inoue Keiichi; Kikukawa Takashi; Sakai Makoto; Fujii Masaaki; Kandori Hideki; Homma Michio; Sudo Yuki
Effects of chloride ion binding on the photochemical properties of salinibacter sensory rhodopsin I.
Journal of molecular biology 2009;392(1):48-62.
2009: Koyama Takayuki; Iwata Tatsuya; Yamamoto Atsushi; Sato Yoshiaki; Matsuoka Daisuke; Tokutomi Satoru; Kandori Hideki
Different role of the Jalpha helix in the light-induced activation of the LOV2 domains in various phototropins.
Biochemistry 2009;48(32):7621-8.
2009: Nakashima Keisuke; Nakamura Takumi; Takeuchi Satoshi; Shibata Mikihiro; Demura Makoto; Tahara Tahei; Kandori Hideki
Properties of the anion-binding site of pharaonis Halorhodopsin studied by ultrafast pump-probe spectroscopy and low-temperature FTIR spectroscopy.
The journal of physical chemistry. B 2009;113(24):8429-34.
2009: Yoshitsugu Maiko; Yamada Junya; Kandori Hideki
Color-changing mutation in the E-F loop of proteorhodopsin.
Biochemistry 2009;48(20):4324-30.
2009: Yamamoto Atsushi; Iwata Tatsuya; Sato Yoshiaki; Matsuoka Daisuke; Tokutomi Satoru; Kandori Hideki
Light signal transduction pathway from flavin chromophore to the J alpha helix of Arabidopsis phototropin1.
Biophysical journal 2009;96(7):2771-8.
2009: Lórenz-Fonfría Víctor A; Kandori Hideki
Spectroscopic and kinetic evidence on how bacteriorhodopsin accomplishes vectorial proton transport under functional conditions.
Journal of the American Chemical Society 2009;131(16):5891-901.
2009: Furutani Yuji; Kandori Hideki; Kawano Masaki; Nakabayashi Koji; Yoshizawa Michito; Fujita Makoto
In situ spectroscopic, electrochemical, and theoretical studies of the photoinduced host-guest electron transfer that precedes unusual host-mediated alkane photooxidation.
Journal of the American Chemical Society 2009;131(13):4764-8.
2009: Kitade Yuya; Furutani Yuji; Kamo Naoki; Kandori Hideki
Proton release group of pharaonis phoborhodopsin revealed by ATR-FTIR spectroscopy.
Biochemistry 2009;48(7):1595-603.
2009: Iwata Tatsuya; Paddock Mark L; Okamura Melvin Y; Kandori Hideki
Identification of FTIR bands due to internal water molecules around the quinone binding sites in the reaction center from Rhodobacter sphaeroides.
Biochemistry 2009;48(6):1220-9.
2008: Suzuki Daisuke; Sudo Yuki; Furutani Yuji; Takahashi Hazuki; Homma Michio; Kandori Hideki
Structural changes of Salinibacter sensory rhodopsin I upon formation of the K and M photointermediates.
Biochemistry 2008;47(48):12750-9.
2008: Neya Saburo; Suzuki Masaaki; Ode Hirotaka; Hoshino Tyuji; Furutani Yuji; Kandori Hideki; Hori Hiroshi; Imai Kiyohiro; Komatsu Teruyuki
Functional evaluation of iron oxypyriporphyrin in protein heme pocket.
Inorganic chemistry 2008;47(22):10771-8.
2008: Nakamura Takumi; Takeuchi Satoshi; Shibata Mikihiro; Demura Makoto; Kandori Hideki; Tahara Tahei
Ultrafast pump-probe study of the primary photoreaction process in pharaonis halorhodopsin: halide ion dependence and isomerization dynamics.
The journal of physical chemistry. B 2008;112(40):12795-800.
2008: Kawanabe Akira; Furutani Yuji; Yoon Sa Ryong; Jung Kwang-Hwan; Kandori Hideki
FTIR study of the L intermediate of Anabaena sensory rhodopsin: structural changes in the cytoplasmic region.
Biochemistry 2008;47(38):10033-40.
2008: Kitajima-Ihara Tomomi; Furutani Yuji; Suzuki Daisuke; Ihara Kunio; Kandori Hideki; Homma Michio; Sudo Yuki
Salinibacter sensory rhodopsin: sensory rhodopsin I-like protein from a eubacterium.
The Journal of biological chemistry 2008;283(35):23533-41.
2008: Furutani Yuji; Ito Motohiro; Sudo Yuki; Kamo Naoki; Kandori Hideki
Protein-protein interaction of a Pharaonis halorhodopsin mutant forming a complex with Pharaonis halobacterial transducer protein II detected by Fourier-transform infrared spectroscopy.
Photochemistry and photobiology 2008;84(4):874-9.
2008: Ito Motohiro; Sudo Yuki; Furutani Yuji; Okitsu Takashi; Wada Akimori; Homma Michio; Spudich John L; Kandori Hideki
Steric constraint in the primary photoproduct of sensory rhodopsin II is a prerequisite for light-signal transfer to HtrII.
Biochemistry 2008;47(23):6208-15.
2008: Lórenz-Fonfría Víctor A; Furutani Yuji; Kandori Hideki
Active internal waters in the bacteriorhodopsin photocycle. A comparative study of the L and M intermediates at room and cryogenic temperatures by infrared spectroscopy.
Biochemistry 2008;47(13):4071-81.
2008: Sudo Yuki; Furutani Yuji; Iwamoto Masayuki; Kamo Naoki; Kandori Hideki
Structural changes in the O-decay accelerated mutants of pharaonis phoborhodopsin.
Biochemistry 2008;47(9):2866-74.
2008: Furutani Yuji; Takahashi Hazuki; Sasaki Jun; Sudo Yuki; Spudich John L; Kandori Hideki
Structural changes of sensory rhodopsin I and its transducer protein are dependent on the protonated state of Asp76.
Biochemistry 2008;47(9):2875-83.
2008: Yamamoto Atsushi; Iwata Tatsuya; Tokutomi Satoru; Kandori Hideki
Role of Phe1010 in light-induced structural changes of the neo1-LOV2 domain of Adiantum.
Biochemistry 2008;47(3):922-8.
2008: Yoshitsugu Maiko; Shibata Mikihiro; Ikeda Daisuke; Furutani Yuji; Kandori Hideki
Color change of proteorhodopsin by a single amino acid replacement at a distant cytoplasmic loop.
Angewandte Chemie (International ed. in English) 2008;47(21):3923-6.
2007: Sato Yoshiaki; Nabeno Mika; Iwata Tatsuya; Tokutomi Satoru; Sakurai Minoru; Kandori Hideki
Heterogeneous environment of the S-H group of Cys966 near the flavin chromophore in the LOV2 domain of Adiantum neochrome1.
Biochemistry 2007;46(36):10258-65.
2007: Kawanabe Akira; Furutani Yuji; Jung Kwang-Hwan; Kandori Hideki
Photochromism of Anabaena sensory rhodopsin.
Journal of the American Chemical Society 2007;129(27):8644-9.
2007: Shibata Mikihiro; Yoshitsugu Maiko; Mizuide Noriko; Ihara Kunio; Kandori Hideki
Halide binding by the D212N mutant of Bacteriorhodopsin affects hydrogen bonding of water in the active site.
Biochemistry 2007;46(25):7525-35.
2007: Iwata Tatsuya; Yamamoto Atsushi; Tokutomi Satoru; Kandori Hideki
Hydration and temperature similarly affect light-induced protein structural changes in the chromophoric domain of phototropin.
Biochemistry 2007;46(23):7016-21.
2007: Ikeda Daisuke; Furutani Yuji; Kandori Hideki
FTIR study of the retinal Schiff base and internal water molecules of proteorhodopsin.
Biochemistry 2007;46(18):5365-73.
2007: Perálvarez-Marín Alex; Lórenz-Fonfría Víctor A; Bourdelande José-Luís; Querol Enric; Kandori Hideki; Padrós Esteve
Inter-helical hydrogen bonds are essential elements for intra-protein signal transduction: the role of Asp115 in bacteriorhodopsin transport function.
Journal of molecular biology 2007;368(3):666-76.
2007: Lórenz-Fonfría Victor A; Kandori Hideki
Bayesian maximum entropy (two-dimensional) lifetime distribution reconstruction from time-resolved spectroscopic data.
Applied spectroscopy 2007;61(4):428-43.
2007: Lórenz-Fonfría Víctor A; Kandori Hideki
Practical aspects of the maximum entropy inversion of the laplace transform for the quantitative analysis of multi-exponential data.
Applied spectroscopy 2007;61(1):74-84.
2007: Matsuoka Daisuke; Iwata Tatsuya; Zikihara Kazunori; Kandori Hideki; Tokutomi Satoru
Primary processes during the light-signal transduction of phototropin.
Photochemistry and photobiology 2007;83(1):122-30.
2007: Furutani Yuji; Ido Kazutomo; Sasaki Masako; Ogawa Makoto; Kandori Hideki
Clay mimics color tuning in visual pigments.
Angewandte Chemie (International ed. in English) 2007;46(42):8010-2.
2006: Iwata Tatsuya; Nozaki Dai; Sato Yoshiaki; Sato Kyosuke; Nishina Yasuzo; Shiga Kiyoshi; Tokutomi Satoru; Kandori Hideki
Identification of the C=O stretching vibrations of FMN and peptide backbone by 13C-labeling of the LOV2 domain of Adiantum phytochrome3.
Biochemistry 2006;45(51):15384-91.
2006: Furutani Yuji; Sumii Masayo; Fan Ying; Shi Lichi; Waschuk Stephen A; Brown Leonid S; Kandori Hideki
Conformational coupling between the cytoplasmic carboxylic acid and the retinal in a fungal light-driven proton pump.
Biochemistry 2006;45(51):15349-58.
2006: Furutani Yuji; Sudo Yuki; Wada Akimori; Ito Masayoshi; Shimono Kazumi; Kamo Naoki; Kandori Hideki
Assignment of the hydrogen-out-of-plane and -in-plane vibrations of the retinal chromophore in the K intermediate of pharaonis phoborhodopsin.
Biochemistry 2006;45(39):11836-43.
2006: Zikihara Kazunori; Iwata Tatsuya; Matsuoka Daisuke; Kandori Hideki; Todo Takeshi; Tokutomi Satoru
Photoreaction cycle of the light, oxygen, and voltage domain in FKF1 determined by low-temperature absorption spectroscopy.
Biochemistry 2006;45(36):10828-37.
2006: Mizuide Noriko; Shibata Mikihiro; Friedman Noga; Sheves Mordechai; Belenky Marina; Herzfeld Judith; Kandori Hideki
Structural changes in bacteriorhodopsin following retinal photoisomerization from the 13-cis form.
Biochemistry 2006;45(35):10674-81.
2006: Shibata Mikihiro; Ihara Kunio; Kandori Hideki
Hydrogen-bonding interaction of the protonated schiff base with halides in a chloride-pumping bacteriorhodopsin mutant.
Biochemistry 2006;45(35):10633-40.
2006: Muneda Norikazu; Shibata Mikihiro; Demura Makoto; Kandori Hideki
Internal water molecules of the proton-pumping halorhodopsin in the presence of azide.
Journal of the American Chemical Society 2006;128(19):6294-5.
2006: Lórenz-Fonfría Víctor A; Kandori Hideki
Transformation of time-resolved spectra to lifetime-resolved spectra by maximum entropy inversion of the laplace transform.
Applied spectroscopy 2006;60(4):407-17.
2006: Kamada Kentaro; Furutani Yuji; Sudo Yuki; Kamo Naoki; Kandori Hideki
Temperature-dependent interactions between photoactivated pharaonis phoborhodopsin and its transducer.
Biochemistry 2006;45(15):4859-66.
2006: Kawanabe Akira; Furutani Yuji; Jung Kwang-Hwan; Kandori Hideki
FTIR study of the photoisomerization processes in the 13-cis and all-trans forms of Anabaena sensory rhodopsin at 77 K.
Biochemistry 2006;45(14):4362-70.
2006: Ota Toru; Furutani Yuji; Terakita Akihisa; Shichida Yoshinori; Kandori Hideki
Structural changes in the Schiff base region of squid rhodopsin upon photoisomerization studied by low-temperature FTIR spectroscopy.
Biochemistry 2006;45(9):2845-51.
2006: Hirano Takahiro; Fujioka Naoko; Imai Hiroo; Kandori Hideki; Wada Akimori; Ito Masayoshi; Shichida Yoshinori
Assignment of the vibrational modes of the chromophores of iodopsin and bathoiodopsin: low-temperature fourier transform infrared spectroscopy of 13C- and 2H-labeled iodopsins.
Biochemistry 2006;45(4):1285-94.
2005: Sudo Yuki; Furutani Yuji; Wada Akimori; Ito Masayoshi; Kamo Naoki; Kandori Hideki
Steric constraint in the primary photoproduct of an archaeal rhodopsin from regiospecific perturbation of C-D stretching vibration of the retinyl chromophore.
Journal of the American Chemical Society 2005;127(46):16036-7.
2005: Sumii Masayo; Furutani Yuji; Waschuk Stephen A; Brown Leonid S; Kandori Hideki
Strongly hydrogen-bonded water molecule present near the retinal chromophore of Leptosphaeria rhodopsin, the bacteriorhodopsin-like proton pump from a eukaryote.
Biochemistry 2005;44(46):15159-66.
2005: Furutani Yuji; Kawanabe Akira; Jung Kwang-Hwan; Kandori Hideki
FTIR spectroscopy of the all-trans form of Anabaena sensory rhodopsin at 77 K: hydrogen bond of a water between the Schiff base and Asp75.
Biochemistry 2005;44(37):12287-96.
2005: Shibata Mikihiro; Muneda Norikazu; Sasaki Takanori; Shimono Kazumi; Kamo Naoki; Demura Makoto; Kandori Hideki
Hydrogen-bonding alterations of the protonated Schiff base and water molecule in the chloride pump of Natronobacterium pharaonis.
Biochemistry 2005;44(37):12279-86.
2005: Furutani Yuji; Shibata Mikihiro; Kandori Hideki
Strongly hydrogen-bonded water molecules in the Schiff base region of rhodopsins.
Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology 2005;4(9):661-6.
2005: Kandori Hideki; Nakamura Hiro; Yamazaki Yoichi; Mogi Tatsushi
Redox-induced protein structural changes in cytochrome bo revealed by Fourier transform infrared spectroscopy and [13C]Tyr labeling.
The Journal of biological chemistry 2005;280(38):32821-6.
2005: Furutani Yuji; Terakita Akihisa; Shichida Yoshinori; Kandori Hideki
FTIR studies of the photoactivation processes in squid retinochrome.
Biochemistry 2005;44(22):7988-97.
2005: Iwata Tatsuya; Nozaki Dai; Tokutomi Satoru; Kandori Hideki
Comparative investigation of the LOV1 and LOV2 domains in Adiantum phytochrome3.
Biochemistry 2005;44(20):7427-34.
2005: Shibata Mikihiro; Kandori Hideki
FTIR studies of internal water molecules in the Schiff base region of bacteriorhodopsin.
Biochemistry 2005;44(20):7406-13.
2005: Furutani Yuji; Kamada Kentaro; Sudo Yuki; Shimono Kazumi; Kamo Naoki; Kandori Hideki
Structural changes of the complex between pharaonis phoborhodopsin and its cognate transducer upon formation of the M photointermediate.
Biochemistry 2005;44(8):2909-15.
2005: Sato Yoshiaki; Iwata Tatsuya; Tokutomi Satoru; Kandori Hideki
Reactive cysteine is protonated in the triplet excited state of the LOV2 domain in Adiantum phytochrome3.
Journal of the American Chemical Society 2005;127(4):1088-9.
2004: Hayashi Shigehiko; Tajkhorshid Emad; Kandori Hideki; Schulten Klaus
Role of hydrogen-bond network in energy storage of bacteriorhodopsin's light-driven proton pump revealed by ab initio normal-mode analysis.
Journal of the American Chemical Society 2004;126(34):10516-7.
2004: Furutani Yuji; Bezerra Arandi G; Waschuk Stephen; Sumii Masayo; Brown Leonid S; Kandori Hideki
FTIR spectroscopy of the K photointermediate of Neurospora rhodopsin: structural changes of the retinal, protein, and water molecules after photoisomerization.
Biochemistry 2004;43(30):9636-46.
2004: Kandori Hideki
Hydration switch model for the proton transfer in the Schiff base region of bacteriorhodopsin.
Biochimica et biophysica acta 2004;1658(1-2):72-9.
2004: Tanimoto Taro; Shibata Mikihiro; Belenky Marina; Herzfeld Judith; Kandori Hideki
Altered hydrogen bonding of Arg82 during the proton pump cycle of bacteriorhodopsin: a low-temperature polarized FTIR spectroscopic study.
Biochemistry 2004;43(29):9439-47.
2004: Nozaki Dai; Iwata Tatsuya; Ishikawa Tomoko; Todo Takeshi; Tokutomi Satoru; Kandori Hideki
Role of Gln1029 in the photoactivation processes of the LOV2 domain in adiantum phytochrome3.
Biochemistry 2004;43(26):8373-9.
2004: Furutani Yuji; Iwamoto Masayuki; Shimono Kazumi; Wada Akimori; Ito Masayoshi; Kamo Naoki; Kandori Hideki
FTIR spectroscopy of the O photointermediate in pharaonis phoborhodopsin.
Biochemistry 2004;43(18):5204-12.
2003: Shibata Mikihiro; Tanimoto Taro; Kandori Hideki
Water molecules in the schiff base region of bacteriorhodopsin.
Journal of the American Chemical Society 2003;125(44):13312-3.
2003: Furutani Yuji; Shichida Yoshinori; Kandori Hideki
Structural changes of water molecules during the photoactivation processes in bovine rhodopsin.
Biochemistry 2003;42(32):9619-25.
2003: Furutani Yuji; Kandori Hideki; Shichida Yoshinori
Structural changes in lumirhodopsin and metarhodopsin I studied by their photoreactions at 77 K.
Biochemistry 2003;42(28):8494-500.
2003: Iwata Tatsuya; Nozaki Dai; Tokutomi Satoru; Kagawa Takatoshi; Wada Masamitsu; Kandori Hideki
Light-induced structural changes in the LOV2 domain of Adiantum phytochrome3 studied by low-temperature FTIR and UV-visible spectroscopy.
Biochemistry 2003;42(27):8183-91.
2003: Furutani Yuji; Sudo Yuki; Kamo Naoki; Kandori Hideki
FTIR spectroscopy of the complex between pharaonis phoborhodopsin and its transducer protein.
Biochemistry 2003;42(17):4837-42.
2003: Tanimoto Taro; Furutani Yuji; Kandori Hideki
Structural changes of water in the Schiff base region of bacteriorhodopsin: proposal of a hydration switch model.
Biochemistry 2003;42(8):2300-6.
2002: Furutani Yuji; Iwamoto Masayuki; Shimono Kazumi; Kamo Naoki; Kandori Hideki
FTIR spectroscopy of the M photointermediate in pharaonis rhoborhodopsin.
Biophysical journal 2002;83(6):3482-9.
2002: Furutani Yuji; Kandori Hideki
Internal water molecules of archaeal rhodopsins (Review).
Molecular membrane biology 2002;19(4):257-65.
2002: Iwata Tatsuya; Tokutomi Satoru; Kandori Hideki
Photoreaction of the cysteine S-H group in the LOV2 domain of Adiantum phytochrome3.
Journal of the American Chemical Society 2002;124(40):11840-1.
2002: Kandori Hideki; Belenky Marina; Herzfeld Judith
Vibrational frequency and dipolar orientation of the protonated Schiff base in bacteriorhodopsin before and after photoisomerization.
Biochemistry 2002;41(19):6026-31.
2002: Kandori Hideki; Shimono Kazumi; Shichida Yoshinori; Kamo Naoki
Interaction of Asn105 with the retinal chromophore during photoisomerization of pharaonis phoborhodopsin.
Biochemistry 2002;41(14):4554-9.
2001: Kandori H; Furutani Y; Shimono K; Shichida Y; Kamo N
Internal water molecules of pharaonis phoborhodopsin studied by low-temperature infrared spectroscopy.
Biochemistry 2001;40(51):15693-8.
2001: Kandori H; Shichida Y; Yoshizawa T
Photoisomerization in rhodopsin.
Biochemistry. Biokhimii?a 2001;66(11):1197-209.
2001: Kandori H; Shimono K; Sudo Y; Iwamoto M; Shichida Y; Kamo N
Structural changes of pharaonis phoborhodopsin upon photoisomerization of the retinal chromophore: infrared spectral comparison with bacteriorhodopsin.
Biochemistry 2001;40(31):9238-46.
2001: Imai H; Hirano T; Kandori H; Terakita A; Shichida Y
Difference in molecular structure of rod and cone visual pigments studied by Fourier transform infrared spectroscopy.
Biochemistry 2001;40(9):2879-86.
2001: Kandori H; Yamazaki Y; Shichida Y; Raap J; Lugtenburg J; Belenky M; Herzfeld J
Tight Asp-85--Thr-89 association during the pump switch of bacteriorhodopsin.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(4):1571-6.
2001: Hirano T; Imai H; Kandori H; Shichida Y
Chloride effect on iodopsin studied by low-temperature visible and infrared spectroscopies.
Biochemistry 2001;40(5):1385-92.
2000: Kandori H
Role of internal water molecules in bacteriorhodopsin.
Biochimica et biophysica acta 2000;1460(1):177-91.
2000: Kandori H; Iwata T; Hendriks J; Maeda A; Hellingwerf K J
Water structural changes involved in the activation process of photoactive yellow protein.
Biochemistry 2000;39(27):7902-9.
2000: Kandori H; Kinoshita N; Yamazaki Y; Maeda A; Shichida Y; Needleman R; Lanyi J K; Bizounok M; Herzfeld J; Raap J; Lugtenburg J
Local and distant protein structural changes on photoisomerization of the retinal in bacteriorhodopsin.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(9):4643-8.
1999: Imamoto Y; Hirano T; Imai H; Kandori H; Maeda A; Yoshizawa T; Groesbeek M; Lugtenburg J; Shichida Y
Effect of anion binding on iodopsin studied by low-temperature fourier transform infrared spectroscopy.
Biochemistry 1999;38(36):11749-54.
1999: Kandori H; Kinoshita N; Yamazaki Y; Maeda A; Shichida Y; Needleman R; Lanyi J K; Bizounok M; Herzfeld J; Raap J; Lugtenburg J
Structural change of threonine 89 upon photoisomerization in bacteriorhodopsin as revealed by polarized FTIR spectroscopy.
Biochemistry 1999;38(30):9676-83.
1999: Chon Y S; Kandori H; Sasaki J; Lanyi J K; Needleman R; Maeda A
Existence of two L photointermediates of halorhodopsin from Halobacterium salinarium, differing in their protein and water FTIR bands.
Biochemistry 1999;38(29):9449-55.
1999: Yamazaki Y; Kandori H; Mogi T
Effects of subunit I mutations on redox-linked conformational changes of the Escherichia coli bo-type ubiquinol oxidase revealed by Fourier-transform infrared spectroscopy.
Journal of biochemistry 1999;126(1):194-9.
1999: Yamazaki Y; Kandori H; Mogi T
Fourier-transform infrared studies on conformation changes in bd-type ubiquinol oxidase from Escherichia coli upon photoreduction of the redox metal centers.
Journal of biochemistry 1999;125(6):1131-6.
1998: Nagata T; Terakita A; Kandori H; Shichida Y; Maeda A
The hydrogen-bonding network of water molecules and the peptide backbone in the region connecting Asp83, Gly120, and Glu113 in bovine rhodopsin.
Biochemistry 1998;37(49):17216-22.
1998: Nishimura S; Kandori H; Maeda A
Interaction between photoactivated rhodopsin and the C-terminal peptide of transducin alpha-subunit studied by FTIR spectroscopy.
Biochemistry 1998;37(45):15816-24.
1998: Yamazaki Y; Kandori H; Needleman R; Lanyi J K; Maeda A
Interaction of the protonated Schiff base with the peptide backbone of valine 49 and the intervening water molecule in the N photointermediate of bacteriorhodopsin.
Biochemistry 1998;37(6):1559-64.
1997: Nishimura S; Kandori H; Maeda A
Transmembrane signaling mediated by water in bovine rhodopsin.
Photochemistry and photobiology 1997;66(6):796-801.
1997: Hatanaka M; Kandori H; Maeda A
Localization and orientation of functional water molecules in bacteriorhodopsin as revealed by polarized Fourier transform infrared spectroscopy.
Biophysical journal 1997;73(2):1001-6.
1997: Nagata T; Terakita A; Kandori H; Kojima D; Shichida Y; Maeda A
Water and peptide backbone structure in the active center of bovine rhodopsin.
Biochemistry 1997;36(20):6164-70.
1997: Hatanaka M; Kashima R; Kandori H; Friedman N; Sheves M; Needleman R; Lanyi J K; Maeda A
Trp86 --> Phe replacement in bacteriorhodopsin affects a water molecule near Asp85 and light adaptation.
Biochemistry 1997;36(18):5493-8.
1997: Kandori H; Yamazaki Y; Hatanaka M; Needleman R; Brown L S; Richter H T; Lanyi J K; Maeda A
Time-resolved fourier transform infrared study of structural changes in the last steps of the photocycles of Glu-204 and Leu-93 mutants of bacteriorhodopsin.
Biochemistry 1997;36(17):5134-41.
1997: Maeda A; Kandori H; Yamazaki Y; Nishimura S; Hatanaka M; Chon Y S; Sasaki J; Needleman R; Lanyi J K
Intramembrane signaling mediated by hydrogen-bonding of water and carboxyl groups in bacteriorhodopsin and rhodopsin.
Journal of biochemistry 1997;121(3):399-406.
1997: Kandori H; Maeda A
[How does, bacteriorhodopsin convert light into energy?]
Tanpakushitsu kakusan koso. Protein, nucleic acid, enzyme 1997;42(2):101-9.
1997: Nishimura S; Kandori H; Nakagawa M; Tsuda M; Maeda A
Structural dynamics of water and the peptide backbone around the Schiff base associated with the light-activated process of octopus rhodopsin.
Biochemistry 1997;36(4):864-70.
1996: Richter H T; Needleman R; Kandori H; Maeda A; Lanyi J K
Relationship of retinal configuration and internal proton transfer at the end of the bacteriorhodopsin photocycle.
Biochemistry 1996;35(48):15461-6.
1996: Chon Y S; Sasaki J; Kandori H; Brown L S; Lanyi J K; Needleman R; Maeda A
Hydration of the counterion of the Schiff base in the chloride-transporting mutant of bacteriorhodopsin: FTIR and FT-raman studies of the effects of anion binding when Asp85 is replaced with a neutral residue.
Biochemistry 1996;35(45):14244-50.
1996: Nishimura S; Sasaki J; Kandori H; Matsuda T; Fukada Y; Maeda A
Structural changes in the peptide backbone in complex formation between activated rhodopsin and transducin studied by FTIR spectroscopy.
Biochemistry 1996;35(41):13267-71.
1996: Hatanaka M; Sasaki J; Kandori H; Ebrey T G; Needleman R; Lanyi J K; Maeda A
Effects of arginine-82 on the interactions of internal water molecules in bacteriorhodopsin.
Biochemistry 1996;35(20):6308-12.
1996: Yamazaki Y; Tuzi S; Saitô H; Kandori H; Needleman R; Lanyi J K; Maeda A
Hydrogen bonds of water and C==O groups coordinate long-range structural changes in the L photointermediate of bacteriorhodopsin.
Biochemistry 1996;35(13):4063-8.
1995: Nishimura S; Sasaki J; Kandori H; Lugtenburg J; Maeda A
Structural changes in the lumirhodopsin-to-metarhodopsin I conversion of air-dried bovine rhodopsin.
Biochemistry 1995;34(51):16758-63.
1995: Brown L S; Sasaki J; Kandori H; Maeda A; Needleman R; Lanyi J K
Glutamic acid 204 is the terminal proton release group at the extracellular surface of bacteriorhodopsin.
The Journal of biological chemistry 1995;270(45):27122-6.
1995: Váró G; Brown L S; Sasaki J; Kandori H; Maeda A; Needleman R; Lanyi J K
Light-driven chloride ion transport by halorhodopsin from Natronobacterium pharaonis. 1. The photochemical cycle.
Biochemistry 1995;34(44):14490-9.
1995: Kandori H; Maeda A
FTIR spectroscopy reveals microscopic structural changes of the protein around the rhodopsin chromophore upon photoisomerization.
Biochemistry 1995;34(43):14220-9.
1995: Brown L S; Váró G; Hatanaka M; Sasaki J; Kandori H; Maeda A; Friedman N; Sheves M; Nedleman R; Lanyi J K
The complex extracellular domain regulates the deprotonation and reprotonation of the retinal Schiff base during the bacteriorhodopsin photocycle.
Biochemistry 1995;34(39):12903-11.
1995: Sasaki J; Brown L S; Chon Y S; Kandori H; Maeda A; Needleman R; Lanyi J K
Conversion of bacteriorhodopsin into a chloride ion pump.
Science (New York, N.Y.) 1995;269(5220):73-5.
1995: Yamazaki Y; Hatanaka M; Kandori H; Sasaki J; Karstens W F; Raap J; Lugtenburg J; Bizounok M; Herzfeld J; Needleman R
Water structural changes at the proton uptake site (the Thr46-Asp96 domain) in the L intermediate of bacteriorhodopsin.
Biochemistry 1995;34(21):7088-93.
1995: Sasaki J; Yuzawa T; Kandori H; Maeda A; Hamaguchi H
Nanosecond time-resolved infrared spectroscopy distinguishes two K species in the bacteriorhodopsin photocycle.
Biophysical journal 1995;68(5):2073-80.
1995: Yamazaki Y; Sasaki J; Hatanaka M; Kandori H; Maeda A; Needleman R; Shinada T; Yoshihara K; Brown L S; Lanyi J K
Interaction of tryptophan-182 with the retinal 9-methyl group in the L intermediate of bacteriorhodopsin.
Biochemistry 1995;34(2):577-82.
1994: Okada T; Matsuda T; Kandori H; Fukada Y; Yoshizawa T; Shichida Y
Circular dichroism of metaiodopsin II and its binding to transducin: a comparative study between meta II intermediates of iodopsin and rhodopsin.
Biochemistry 1994;33(16):4940-6.
1993: Shichida Y; Okada T; Kandori H; Fukada Y; Yoshizawa T
Nanosecond laser photolysis of iodopsin, a chicken red-sensitive cone visual pigment.
Biochemistry 1993;32(40):10832-8.
1993: Mizukami T; Kandori H; Shichida Y; Chen A H; Derguini F; Caldwell C G; Biffe C F; Nakanishi K; Yoshizawa T
Photoisomerization mechanism of the rhodopsin chromophore: picosecond photolysis of pigment containing 11-cis-locked eight-membered ring retinal.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(9):4072-6.
1991: Shichida Y; Kandori H; Okada T; Yoshizawa T; Nakashima N; Yoshihara K
Differences in the photobleaching process between 7-cis- and 11-cis-rhodopsins: a unique interaction change between the chromophore and the protein during the lumi-meta I transition.
Biochemistry 1991;30(24):5918-26.
1991: Okada T; Kandori H; Shichida Y; Yoshizawa T; Denny M; Zhang B W; Asato A E; Liu R S
Spectroscopic study of the batho-to-lumi transition during the photobleaching of rhodopsin using ring-modified retinal analogues.
Biochemistry 1991;30(19):4796-802.
1990: Kandori H; Mizukami T; Okada T; Imamoto Y; Fukada Y; Shichida Y; Yoshizawa T
Bathoiodopsin, a primary intermediate of iodopsin at physiological temperature.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(22):8908-12.
1989: Imamoto Y; Kandori H; Okano T; Fukada Y; Shichida Y; Yoshizawa T
Effect of chloride ion on the thermal decay process of the batho intermediate of iodopsin at low temperature.
Biochemistry 1989;28(24):9412-6.
1989: Kandori H; Shichida Y; Yoshizawa T
Absolute absorption spectra of batho- and photorhodopsins at room temperature. Picosecond laser photolysis of rhodopsin in polyacrylamide.
Biophysical journal 1989;56(3):453-7.
1989: Kandori H; Matuoka S; Shichida Y; Yoshizawa T; Ito M; Tsukida K; Balogh-Nair V; Nakanishi K
Mechanism of isomerization of rhodopsin studied by use of 11-cis-locked rhodopsin analogues excited with a picosecond laser pulse.
Biochemistry 1989;28(15):6460-7.
1989: Kandori H; Matuoka S; Shichida Y; Yoshizawa T
Dependency of photon density on primary process of cattle rhodopsin.
Photochemistry and photobiology 1989;49(2):181-4.
1988: Kandori H; Matuoka S; Nagai H; Shichida Y; Yoshizawa T
Dependency of apparent relative quantum yield of isorhodopsin to rhodopsin on the photon density of picosecond laser pulse.
Photochemistry and photobiology 1988;48(1):93-7.

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