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Natasha Karp

Research Profile

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Proteomics

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Chemicals & Drugs

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Oligonucleotide Array Sequence Analysis

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TOP 3
Michael J Deery; Elizabeth S Maywood; Johanna E Chesham; Martin Sládek; Natasha A Karp; Edward W Green; Philip D Charles; Akhilesh Reddy; Charalambos P Kyriacou; Kathryn S Lilley; Michael H Hastings
Proteomic analysis reveals the role of synaptic vesicle cycling in sustaining the suprachiasmatic circadian clock.
Natasha A Karp; Kathryn S Lilley
Investigating sample pooling strategies for DIGE experiments to address biological variability.
Natasha A Karp; Renata Feret; Denis V Rubtsov; Kathryn S Lilley
Comparison of DIGE and post-stained gel electrophoresis with both traditional and SameSpots analysis for quantitative proteomics.

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All Publications

2009: Michael J Deery; Elizabeth S Maywood; Johanna E Chesham; Martin Sládek; Natasha A Karp; Edward W Green; Philip D Charles; Akhilesh Reddy; Charalambos P Kyriacou; Kathryn S Lilley; Michael H Hastings
Proteomic analysis reveals the role of synaptic vesicle cycling in sustaining the suprachiasmatic circadian clock.
Current biology : CB 2009;19(23):2031-6.
2009: Natasha A Karp; Kathryn S Lilley
Investigating sample pooling strategies for DIGE experiments to address biological variability.
Proteomics 2009;9(2):388-97.
2008: Natasha A Karp; Renata Feret; Denis V Rubtsov; Kathryn S Lilley
Comparison of DIGE and post-stained gel electrophoresis with both traditional and SameSpots analysis for quantitative proteomics.
Proteomics 2008;8(5):948-60.
2007: Natasha A Karp; Kathryn S Lilley
Design and analysis issues in quantitative proteomics studies.
Proteomics 2007;7 Suppl 1():42-50.
2007: Natasha A Karp; Paul S McCormick; Matthew R Russell; Kathryn S Lilley
Experimental and statistical considerations to avoid false conclusions in proteomics studies using differential in-gel electrophoresis.
Molecular & cellular proteomics : MCP 2007;6(8):1354-64.
2007: Akhilesh Reddy; Elizabeth S Maywood; Natasha A Karp; Verdun M King; Yusuke Inoue; Frank J Gonzalez; Kathryn S Lilley; Charalambos P Kyriacou; Michael H Hastings
Glucocorticoid signaling synchronizes the liver circadian transcriptome.
Hepatology (Baltimore, Md.) 2007;45(6):1478-88.
2007: Natasha A Karp; Kathryn S Lilley
Identification of clock genes using difference gel electrophoresis.
Methods in molecular biology (Clifton, N.J.) 2007;362():265-87.
2006: Akhilesh Reddy; Natasha A Karp; Elizabeth S Maywood; Elizabeth A Sage; Michael Deery; John S O'Neill; Gabriel K Y Wong; Johanna E Chesham; Mark Odell; Kathryn S Lilley; Charalambos P Kyriacou; Michael H Hastings
Circadian orchestration of the hepatic proteome.
Current biology : CB 2006;16(11):1107-15.
2005: Natasha A Karp; Matthew Spencer; Helen Lindsay; Kevin O'Dell; Kathryn S Lilley
Impact of replicate types on proteomic expression analysis.
Journal of proteome research 2005;4(5):1867-71.
2005: Natasha A Karp; Kathryn S Lilley
Maximising sensitivity for detecting changes in protein expression: experimental design using minimal CyDyes.
Proteomics 2005;5(12):3105-15.
2005: Natasha A Karp; Julian L Griffin; Kathryn S Lilley
Application of partial least squares discriminant analysis to two-dimensional difference gel studies in expression proteomics.
Proteomics 2005;5(1):81-90.
2004: David P Kreil; Natasha A Karp; Kathryn S Lilley
DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results.
Bioinformatics (Oxford, England) 2004;20(13):2026-34.
2004: Sudhakaran Prabakaran; Jane E Swatton; Margaret M Ryan; Stephen J Huffaker; Jeffrey T-J Huang; Julian L Griffin; Matthew Wayland; Tom C Freeman; F Dudbridge; Kathryn S Lilley; Natasha A Karp; Svenja Hester; Dmitri Tkachev; Michael L Mimmack; Robert H Yolken; Maree Webster; E F Torrey; Sabine Bahn
Mitochondrial dysfunction in schizophrenia: evidence for compromised brain metabolism and oxidative stress.
Molecular psychiatry 2004;9(7):684-97, 643.
2004: Natasha A Karp; David P Kreil; Kathryn S Lilley
Determining a significant change in protein expression with DeCyder during a pair-wise comparison using two-dimensional difference gel electrophoresis.
Proteomics 2004;4(5):1421-32.
2004: Jane E Swatton; Sudhakaran Prabakaran; Natasha A Karp; Kathryn S Lilley; Sabine Bahn
Protein profiling of human postmortem brain using 2-dimensional fluorescence difference gel electrophoresis (2-D DIGE).
Molecular psychiatry 2004;9(2):128-43.