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John Karro

Research Profile

Genes & Molecular Sequences

Activities & Behaviors

Concepts & Ideas

Occupations

Devices

Oligonucleotide Array Sequence Analysis

Chemicals & Drugs

Anatomy

Chromosomes, Human, Pair 22

Living Beings

Pan troglodytes

Physiology

Point Mutation

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Co-author Network

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Publications

TOP 3
John Karro; Yangpan Yan; Deyou Zheng; Zhaolei Zhang; Nicholas Carriero; Philip Cayting; Paul Harrrison; Mark Gerstein
Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation.
Zhaolei Zhang; Nicholas Carriero; Deyou Zheng; John Karro; Paul M Harrison; Mark Gerstein
PseudoPipe: an automated pseudogene identification pipeline.
Paul Bertone; Valery Trifonov; Joel S Rozowsky; Falk Schubert; Olof Emanuelsson; John Karro; Ming-Yang Kao; Michael Snyder; Mark Gerstein
Design optimization methods for genomic DNA tiling arrays.

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All Publications

2007: John Karro; Yangpan Yan; Deyou Zheng; Zhaolei Zhang; Nicholas Carriero; Philip Cayting; Paul Harrrison; Mark Gerstein
Pseudogene.org: a comprehensive database and comparison platform for pseudogene annotation.
Nucleic acids research 2007;35(Database issue):D55-60.
2006: Zhaolei Zhang; Nicholas Carriero; Deyou Zheng; John Karro; Paul M Harrison; Mark Gerstein
PseudoPipe: an automated pseudogene identification pipeline.
Bioinformatics (Oxford, England) 2006;22(12):1437-9.
2006: Paul Bertone; Valery Trifonov; Joel S Rozowsky; Falk Schubert; Olof Emanuelsson; John Karro; Ming-Yang Kao; Michael Snyder; Mark Gerstein
Design optimization methods for genomic DNA tiling arrays.
Genome research 2006;16(2):271-81.
2005: Deyou Zheng; Zhaolei Zhang; Paul M Harrison; John Karro; Nicholas Carriero; Mark Gerstein
Integrated pseudogene annotation for human chromosome 22: evidence for transcription.
Journal of molecular biology 2005;349(1):27-45.
2004: Haiyuan Yu; Xiaowei Zhu; Dov Greenbaum; John Karro; Mark Gerstein
TopNet: a tool for comparing biological sub-networks, correlating protein properties with topological statistics.
Nucleic acids research 2004;32(1):328-37.

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