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Jay Keasling

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

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Physiology

Bacterial Gene Expression Regulation

Chemicals & Drugs

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Biotechnology

Genes & Molecular Sequences

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Publications

TOP 3
Tang Yinjie J; Martin Hector Garcia; Deutschbauer Adam; Feng Xueyang; Huang Rick; Llora Xavier; Arkin Adam; Keasling Jay D
Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations.
Carothers James M; Goler Jonathan A; Keasling Jay D
Chemical synthesis using synthetic biology.
Dueber John E; Wu Gabriel C; Malmirchegini G Reza; Moon Tae Seok; Petzold Christopher J; Ullal Adeeti V; Prather Kristala L J; Keasling Jay D
Synthetic protein scaffolds provide modular control over metabolic flux.

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All Publications

2009: Tang Yinjie J; Martin Hector Garcia; Deutschbauer Adam; Feng Xueyang; Huang Rick; Llora Xavier; Arkin Adam; Keasling Jay D
Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations.
Biotechnology progress 2009;25(5):1254-9.
2009: Carothers James M; Goler Jonathan A; Keasling Jay D
Chemical synthesis using synthetic biology.
Current opinion in biotechnology 2009;20(4):498-503.
2009: Dueber John E; Wu Gabriel C; Malmirchegini G Reza; Moon Tae Seok; Petzold Christopher J; Ullal Adeeti V; Prather Kristala L J; Keasling Jay D
Synthetic protein scaffolds provide modular control over metabolic flux.
Nature biotechnology 2009;27(8):753-9.
2009: Tang Yinjie J; Yi Shan; Zhuang Wei-Qin; Zinder Stephen H; Keasling Jay D; Alvarez-Cohen Lisa
Investigation of carbon metabolism in "Dehalococcoides ethenogenes" strain 195 by use of isotopomer and transcriptomic analyses.
Journal of bacteriology 2009;191(16):5224-31.
2009: Tang Yinjie J; Shui Wenqing; Myers Samuel; Feng Xueyang; Bertozzi Carolyn; Keasling Jay D
Central metabolism in Mycobacterium smegmatis during the transition from O2-rich to O2-poor conditions as studied by isotopomer-assisted metabolite analysis.
Biotechnology letters 2009;31(8):1233-40.
2009: Li Zhirong; Ahn Tae Kyu; Avenson Thomas J; Ballottari Matteo; Cruz Jeffrey A; Kramer David M; Bassi Roberto; Fleming Graham R; Keasling Jay D; Niyogi Krishna K
Lutein accumulation in the absence of zeaxanthin restores nonphotochemical quenching in the Arabidopsis thaliana npq1 mutant.
The Plant cell 2009;21(6):1798-812.
2009: Elias Dwayne A; Mukhopadhyay Aindrila; Joachimiak Marcin P; Drury Elliott C; Redding Alyssa M; Yen Huei-Che B; Fields Matthew W; Hazen Terry C; Arkin Adam P; Keasling Jay D; Wall Judy D
Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation.
Nucleic acids research 2009;37(9):2926-39.
2009: Dietrich Jeffrey A; Yoshikuni Yasuo; Fisher Karl J; Woolard Frank X; Ockey Denise; McPhee Derek J; Renninger Neil S; Chang Michelle C Y; Baker David; Keasling Jay D
A novel semi-biosynthetic route for artemisinin production using engineered substrate-promiscuous P450(BM3).
ACS chemical biology 2009;4(4):261-7.
2009: Tang Yinjie J; Sapra Rajat; Joyner Dominique; Hazen Terry C; Myers Samuel; Reichmuth David; Blanch Harvey; Keasling Jay D
Analysis of metabolic pathways and fluxes in a newly discovered thermophilic and ethanol-tolerant Geobacillus strain.
Biotechnology and bioengineering 2009;102(5):1377-86.
2009: Yoon Sang-Hwal; Lee Sook-Hee; Das Amitabha; Ryu Hee-Kyoung; Jang Hee-Jeong; Kim Jae-Yean; Oh Deok-Kun; Keasling Jay D; Kim Seon-Won
Combinatorial expression of bacterial whole mevalonate pathway for the production of beta-carotene in E. coli.
Journal of biotechnology 2009;140(3-4):218-26.
2009: Marner Wesley D; Shaikh Afshan S; Muller Susan J; Keasling Jay D
Enzyme immobilization via silaffin-mediated autoencapsulation in a biosilica support.
Biotechnology progress 2009;25(2):417-23.
2009: Tang Yinjie J; Martin Hector Garcia; Dehal Paramvir S; Deutschbauer Adam; Llora Xavier; Meadows Adam; Arkin Adam; Keasling Jay D
Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism.
Biotechnology and bioengineering 2009;102(4):1161-9.
2009: Tang Yinjie J; Martin Hector Garcia; Myers Samuel; Rodriguez Sarah; Baidoo Edward E K; Keasling Jay D
Advances in analysis of microbial metabolic fluxes via (13)C isotopic labeling.
Mass spectrometry reviews 2009;28(2):362-75.
2009: Shui Wenqing; Gilmore Sarah A; Sheu Leslie; Liu Jun; Keasling Jay D; Bertozzi Carolyn R
Quantitative proteomic profiling of host-pathogen interactions: the macrophage response to Mycobacterium tuberculosis lipids.
Journal of proteome research 2009;8(1):282-9.
2009: Anthony Jennifer R; Anthony Larry C; Nowroozi Farnaz; Kwon Gina; Newman Jack D; Keasling Jay D
Optimization of the mevalonate-based isoprenoid biosynthetic pathway in Escherichia coli for production of the anti-malarial drug precursor amorpha-4,11-diene.
Metabolic engineering 2009;11(1):13-9.
2009: Kirby James; Keasling Jay D
Biosynthesis of plant isoprenoids: perspectives for microbial engineering.
Annual review of plant biology 2009;60():335-55.
2009: Tsuruta Hiroko; Paddon Christopher J; Eng Diana; Lenihan Jacob R; Horning Tizita; Anthony Larry C; Regentin Rika; Keasling Jay D; Renninger Neil S; Newman Jack D
High-level production of amorpha-4,11-diene, a precursor of the antimalarial agent artemisinin, in Escherichia coli.
PloS one 2009;4(2):e4489.
2008: Lee Sung Kuk; Chou Howard; Ham Timothy S; Lee Taek Soon; Keasling Jay D
Metabolic engineering of microorganisms for biofuels production: from bugs to synthetic biology to fuels.
Current opinion in biotechnology 2008;19(6):556-63.
2008: Shui Wenqing; Sheu Leslie; Liu Jun; Smart Brian; Petzold Christopher J; Hsieh Tsung-Yen; Pitcher Austin; Keasling Jay D; Bertozzi Carolyn R
Membrane proteomics of phagosomes suggests a connection to autophagy.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(44):16952-7.
2008: Lubertozzi David; Keasling Jay D
Expression of a synthetic Artemesia annua amorphadiene synthase in Aspergillus nidulans yields altered product distribution.
Journal of industrial microbiology & biotechnology 2008;35(10):1191-8.
2008: Lee Sung Kuk; Keasling Jay D
Heterologous protein production in Escherichia coli using the propionate-inducible pPro system by conventional and auto-induction methods.
Protein expression and purification 2008;61(2):197-203.
2008: Kirby James; Keasling Jay D
Metabolic engineering of microorganisms for isoprenoid production.
Natural product reports 2008;25(4):656-61.
2008: Fortman J L; Chhabra Swapnil; Mukhopadhyay Aindrila; Chou Howard; Lee Taek Soon; Steen Eric; Keasling Jay D
Biofuel alternatives to ethanol: pumping the microbial well.
Trends in biotechnology 2008;26(7):375-81.
2008: Yoshikuni Yasuo; Dietrich Jeffrey A; Nowroozi Farnaz F; Babbitt Patricia C; Keasling Jay D
Redesigning enzymes based on adaptive evolution for optimal function in synthetic metabolic pathways.
Chemistry & biology 2008;15(6):607-18.
2008: Garcia David E; Baidoo Edward E; Benke Peter I; Pingitore Francesco; Tang Yinjie J; Villa Sandra; Keasling Jay D
Separation and mass spectrometry in microbial metabolomics.
Current opinion in microbiology 2008;11(3):233-9.
2008: Mukhopadhyay Aindrila; Redding Alyssa M; Rutherford Becky J; Keasling Jay D
Importance of systems biology in engineering microbes for biofuel production.
Current opinion in biotechnology 2008;19(3):228-34.
2008: Gaucher Sara P; Redding Alyssa M; Mukhopadhyay Aindrila; Keasling Jay D; Singh Anup K
Post-translational modifications of Desulfovibrio vulgaris Hildenborough sulfate reduction pathway proteins.
Journal of proteome research 2008;7(6):2320-31.
2008: Paradise Eric M; Kirby James; Chan Rossana; Keasling Jay D
Redirection of flux through the FPP branch-point in Saccharomyces cerevisiae by down-regulating squalene synthase.
Biotechnology and bioengineering 2008;100(2):371-8.
2008: Baidoo Edward E K; Benke Peter I; Neusüss Christian; Pelzing Matthias; Kruppa Gary; Leary Julie A; Keasling Jay D
Capillary electrophoresis-fourier transform ion cyclotron resonance mass spectrometry for the identification of cationic metabolites via a pH-mediated stacking-transient isotachophoretic method.
Analytical chemistry 2008;80(9):3112-22.
2008: Kizer Lance; Pitera Douglas J; Pfleger Brian F; Keasling Jay D
Application of functional genomics to pathway optimization for increased isoprenoid production.
Applied and environmental microbiology 2008;74(10):3229-41.
2008: Kirby James; Romanini Dante W; Paradise Eric M; Keasling Jay D
Engineering triterpene production in Saccharomyces cerevisiae-beta-amyrin synthase from Artemisia annua.
The FEBS journal 2008;275(8):1852-9.
2008: Keasling Jay D; Chou Howard
Metabolic engineering delivers next-generation biofuels.
Nature biotechnology 2008;26(3):298-9.
2008: Shaikh Afshan S; Tang Yinjie J; Mukhopadhyay Aindrila; Keasling Jay D
Isotopomer distributions in amino acids from a highly expressed protein as a proxy for those from total protein.
Analytical chemistry 2008;80(3):886-90.
2008: Keasling Jay D
Synthetic biology for synthetic chemistry.
ACS chemical biology 2008;3(1):64-76.
2008: Blanch Harvey W; Adams Paul D; Andrews-Cramer Katherine M; Frommer Wolf B; Simmons Blake A; Keasling Jay D
Addressing the need for alternative transportation fuels: the Joint BioEnergy Institute.
ACS chemical biology 2008;3(1):17-20.
2008: Marner Wesley D; Shaikh Afshan S; Muller Susan J; Keasling Jay D
Morphology of artificial silica matrices formed via autosilification of a silaffin/protein polymer chimera.
Biomacromolecules 2008;9(1):1-5.
2008: Steen Eric J; Chan Rossana; Prasad Nilu; Myers Samuel; Petzold Christopher J; Redding Alyssa; Ouellet Mario; Keasling Jay D
Metabolic engineering of Saccharomyces cerevisiae for the production of n-butanol.
Microbial cell factories 2008;7():36.
2008: Ro Dae-Kyun; Ouellet Mario; Paradise Eric M; Burd Helcio; Eng Diana; Paddon Chris J; Newman Jack D; Keasling Jay D
Induction of multiple pleiotropic drug resistance genes in yeast engineered to produce an increased level of anti-malarial drug precursor, artemisinic acid.
BMC biotechnology 2008;8():83.
2008: Ham Timothy S; Lee Sung K; Keasling Jay D; Arkin Adam P
Design and construction of a double inversion recombination switch for heritable sequential genetic memory.
PloS one 2008;3(7):e2815.
2007: Hale Victoria; Keasling Jay D; Renninger Neil; Diagana Thierry T
Microbially derived artemisinin: a biotechnology solution to the global problem of access to affordable antimalarial drugs.
The American journal of tropical medicine and hygiene 2007;77(6 Suppl):198-202.
2007: Mahendra Shaily; Petzold Christopher J; Baidoo Edward E; Keasling Jay D; Alvarez-Cohen Lisa
Identification of the intermediates of in vivo oxidation of 1 ,4-dioxane by monooxygenase-containing bacteria.
Environmental science & technology 2007;41(21):7330-6.
2007: da Costa Bernardo M T; Cornish Katrina; Keasling Jay D
Manipulation of intracellular magnesium levels in Saccharomyces cerevisiae with deletion of magnesium transporters.
Applied microbiology and biotechnology 2007;77(2):411-25.
2007: McMahon Katherine D; Yilmaz Suzan; He Shaomei; Gall Daniel L; Jenkins David; Keasling Jay D
Polyphosphate kinase genes from full-scale activated sludge plants.
Applied microbiology and biotechnology 2007;77(1):167-73.
2007: Withers Sydnor T; Gottlieb Shayin S; Lieu Bonny; Newman Jack D; Keasling Jay D
Identification of isopentenol biosynthetic genes from Bacillus subtilis by a screening method based on isoprenoid precursor toxicity.
Applied and environmental microbiology 2007;73(19):6277-83.
2007: Lee Sung Kuk; Chou Howard H; Pfleger Brian F; Newman Jack D; Yoshikuni Yasuo; Keasling Jay D
Directed evolution of AraC for improved compatibility of arabinose- and lactose-inducible promoters.
Applied and environmental microbiology 2007;73(18):5711-5.
2007: Suthers Patrick F; Burgard Anthony P; Dasika Madhukar S; Nowroozi Farnaz; Van Dien Stephen; Keasling Jay D; Maranas Costas D
Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
Metabolic engineering 2007;9(5-6):387-405.
2007: Mukhopadhyay Aindrila; Redding Alyssa M; Joachimiak Marcin P; Arkin Adam P; Borglin Sharon E; Dehal Paramvir S; Chakraborty Romy; Geller Jil T; Hazen Terry C; He Qiang; Joyner Dominique C; Martin Vincent J J; Wall Judy D; Yang Zamin Koo; Zhou Jizhong; Keasling Jay D
Cell-wide responses to low-oxygen exposure in Desulfovibrio vulgaris Hildenborough.
Journal of bacteriology 2007;189(16):5996-6010.
2007: Tang Yinjie J; Chakraborty Romy; Martín Héctor García; Chu Jeannie; Hazen Terry C; Keasling Jay D
Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe(III)-nitrilotriacetic acid.
Applied and environmental microbiology 2007;73(12):3859-64.
2007: Yoon Sang-Hwal; Park Hye-Min; Kim Ju-Eun; Lee Sook-Hee; Choi Myung-Suk; Kim Jae-Yean; Oh Deok-Kun; Keasling Jay D; Kim Seon-Won
Increased beta-carotene production in recombinant Escherichia coli harboring an engineered isoprenoid precursor pathway with mevalonate addition.
Biotechnology progress 2007;23(3):599-605.
2007: Chang Michelle C Y; Eachus Rachel A; Trieu William; Ro Dae-Kyun; Keasling Jay D
Engineering Escherichia coli for production of functionalized terpenoids using plant P450s.
Nature chemical biology 2007;3(5):274-7.
2007: Yoshikuni Yasuo; Keasling Jay D
Pathway engineering by designed divergent evolution.
Current opinion in chemical biology 2007;11(2):233-9.
2007: Pingitore Francesco; Tang Yinjie; Kruppa Gary H; Keasling Jay D
Analysis of amino acid isotopomers using FT-ICR MS.
Analytical chemistry 2007;79(6):2483-90.
2007: Tang Yinjie J; Ashcroft Jared M; Chen Ding; Min Guangwei; Kim Chul-Hyun; Murkhejee Bipasha; Larabell Carolyn; Keasling Jay D; Chen Fanqing Frank
Charge-associated effects of fullerene derivatives on microbial structural integrity and central metabolism.
Nano letters 2007;7(3):754-60.
2007: Pitera Douglas J; Paddon Chris J; Newman Jack D; Keasling Jay D
Balancing a heterologous mevalonate pathway for improved isoprenoid production in Escherichia coli.
Metabolic engineering 2007;9(2):193-207.
2007: Shiba Yoichiro; Paradise Eric M; Kirby James; Ro Dae-Kyun; Keasling Jay D
Engineering of the pyruvate dehydrogenase bypass in Saccharomyces cerevisiae for high-level production of isoprenoids.
Metabolic engineering 2007;9(2):160-8.
2007: Yoon Sang-Hwal; Kim Ju-Eun; Lee Sook-Hee; Park Hye-Min; Choi Myung-Suk; Kim Jae-Yean; Lee Si-Hyoung; Shin Yong-Chul; Keasling Jay D; Kim Seon-Won
Engineering the lycopene synthetic pathway in E. coli by comparison of the carotenoid genes of Pantoea agglomerans and Pantoea ananatis.
Applied microbiology and biotechnology 2007;74(1):131-9.
2007: Tang Yinjie J; Meadows Adam L; Kirby James; Keasling Jay D
Anaerobic central metabolic pathways in Shewanella oneidensis MR-1 reinterpreted in the light of isotopic metabolite labeling.
Journal of bacteriology 2007;189(3):894-901.
2007: Tang Yinjie; Pingitore Francesco; Mukhopadhyay Aindrila; Phan Richard; Hazen Terry C; Keasling Jay D
Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography-mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry.
Journal of bacteriology 2007;189(3):940-9.
2007: Tang Yinjie J; Hwang Judy S; Wemmer David E; Keasling Jay D
Shewanella oneidensis MR-1 fluxome under various oxygen conditions.
Applied and environmental microbiology 2007;73(3):718-29.
2007: Withers Sydnor T; Keasling Jay D
Biosynthesis and engineering of isoprenoid small molecules.
Applied microbiology and biotechnology 2007;73(5):980-90.
2007: Pfleger Brian F; Pitera Douglas J; Newman Jack D; Martin Vincent J J; Keasling Jay D
Microbial sensors for small molecules: development of a mevalonate biosensor.
Metabolic engineering 2007;9(1):30-8.
2007: Tang Yinjie J; Meadows Adam L; Keasling Jay D
A kinetic model describing Shewanella oneidensis MR-1 growth, substrate consumption, and product secretion.
Biotechnology and bioengineering 2007;96(1):125-33.
2007: Osterhout Robin E; Figueroa Israel A; Keasling Jay D; Arkin Adam P
Global analysis of host response to induction of a latent bacteriophage.
BMC microbiology 2007;7():82.
2006: Chang Michelle C Y; Keasling Jay D
Production of isoprenoid pharmaceuticals by engineered microbes.
Nature chemical biology 2006;2(12):674-81.
2006: Lee Sung Kuk; Keasling Jay D
Effect of glucose or glycerol as the sole carbon source on gene expression from the Salmonella prpBCDE promoter in Escherichia coli.
Biotechnology progress 2006;22(6):1547-51.
2006: Newman Jack D; Marshall Jessica; Chang Michelle; Nowroozi Farnaz; Paradise Eric; Pitera Douglas; Newman Karyn L; Keasling Jay D
High-level production of amorpha-4,11-diene in a two-phase partitioning bioreactor of metabolically engineered Escherichia coli.
Biotechnology and bioengineering 2006;95(4):684-91.
2006: de la Peña Mattozzi Matthew; Tehara Sundiep K; Hong Thomas; Keasling Jay D
Mineralization of paraoxon and its use as a sole C and P source by a rationally designed catabolic pathway in Pseudomonas putida.
Applied and environmental microbiology 2006;72(10):6699-706.
2006: Lubertozzi David; Keasling Jay D
Marker and promoter effects on heterologous expression in Aspergillus nidulans.
Applied microbiology and biotechnology 2006;72(5):1014-23.
2006: Zahiri Hossein Shahbani; Yoon Sang Hwal; Keasling Jay D; Lee Si Hyoung; Won Kim Seon; Yoon Sung Chul; Shin Yong Chul
Coenzyme Q10 production in recombinant Escherichia coli strains engineered with a heterologous decaprenyl diphosphate synthase gene and foreign mevalonate pathway.
Metabolic engineering 2006;8(5):406-16.
2006: Tang Yinjie J; Laidlaw David; Gani Kishen; Keasling Jay D
Evaluation of the effects of various culture conditions on Cr(VI) reduction by Shewanella oneidensis MR-1 in a novel high-throughput mini-bioreactor.
Biotechnology and bioengineering 2006;95(1):176-84.
2006: Pfleger Brian F; Pitera Douglas J; Smolke Christina D; Keasling Jay D
Combinatorial engineering of intergenic regions in operons tunes expression of multiple genes.
Nature biotechnology 2006;24(8):1027-32.
2006: da Costa Bernardo M T; Keasling Jay D; McMahan Colleen M; Cornish Katrina
Magnesium ion regulation of in vitro rubber biosynthesis by Parthenium argentatum Gray.
Phytochemistry 2006;67(15):1621-8.
2006: Lee Sung Kuk; Keasling Jay D
A Salmonella-based, propionate-inducible, expression system for Salmonella enterica.
Gene 2006;377():6-11.
2006: Yoon Sang-Hwal; Lee Young-Mi; Kim Ju-Eun; Lee Sook-Hee; Lee Joo-Hee; Kim Jae-Yean; Jung Kyung-Hwa; Shin Yong-Chul; Keasling Jay D; Kim Seon-Won
Enhanced lycopene production in Escherichia coli engineered to synthesize isopentenyl diphosphate and dimethylallyl diphosphate from mevalonate.
Biotechnology and bioengineering 2006;94(6):1025-32.
2006: Redding Alyssa M; Mukhopadhyay Aindrila; Joyner Dominique C; Hazen Terry C; Keasling Jay D
Study of nitrate stress in Desulfovibrio vulgaris Hildenborough using iTRAQ proteomics.
Briefings in functional genomics & proteomics 2006;5(2):133-43.
2006: Bio FAB Group; Baker David; Church George; Collins Jim; Endy Drew; Jacobson Joseph; Keasling Jay; Modrich Paul; Smolke Christina; Weiss Ron
Engineering life: building a fab for biology.
Scientific American 2006;294(6):44-51.
2006: Mukhopadhyay Aindrila; He Zhili; Alm Eric J; Arkin Adam P; Baidoo Edward E; Borglin Sharon C; Chen Wenqiong; Hazen Terry C; He Qiang; Holman Hoi-Ying; Huang Katherine; Huang Rick; Joyner Dominique C; Katz Natalie; Keller Martin; Oeller Paul; Redding Alyssa; Sun Jun; Wall Judy; Wei Jing; Yang Zamin; Yen Huei-Che; Zhou Jizhong; Keasling Jay D
Salt stress in Desulfovibrio vulgaris Hildenborough: an integrated genomics approach.
Journal of bacteriology 2006;188(11):4068-78.
2006: Ham Timothy S; Lee Sung Kuk; Keasling Jay D; Arkin Adam P
A tightly regulated inducible expression system utilizing the fim inversion recombination switch.
Biotechnology and bioengineering 2006;94(1):1-4.
2006: Ro Dae-Kyun; Paradise Eric M; Ouellet Mario; Fisher Karl J; Newman Karyn L; Ndungu John M; Ho Kimberly A; Eachus Rachel A; Ham Timothy S; Kirby James; Chang Michelle C Y; Withers Sydnor T; Shiba Yoichiro; Sarpong Richmond; Keasling Jay D
Production of the antimalarial drug precursor artemisinic acid in engineered yeast.
Nature 2006;440(7086):940-3.
2006: Yoshikuni Yasuo; Ferrin Thomas E; Keasling Jay D
Designed divergent evolution of enzyme function.
Nature 2006;440(7087):1078-82.
2006: Espy Stephanie C; Keasling Jay D; Castillón Javier; Cornish Katrina
Initiator-independent and initiator-dependent rubber biosynthesis in Ficus elastica.
Archives of biochemistry and biophysics 2006;448(1-2):13-22.
2006: Lee Sung Kuk; Keasling Jay D
Propionate-regulated high-yield protein production in Escherichia coli.
Biotechnology and bioengineering 2006;93(5):912-8.
2006: Yoshikuni Yasuo; Martin Vincent J J; Ferrin Thomas E; Keasling Jay D
Engineering cotton (+)-delta-cadinene synthase to an altered function: germacrene D-4-ol synthase.
Chemistry & biology 2006;13(1):91-8.
2005: Pfleger Brian F; Fawzi Nicolas J; Keasling Jay D
Optimization of DsRed production in Escherichia coli: effect of ribosome binding site sequestration on translation efficiency.
Biotechnology and bioengineering 2005;92(5):553-8.
2005: Voigt Christopher A; Keasling Jay D
Programming cellular function.
Nature chemical biology 2005;1(6):304-7.
2005: Lee Sung Kuk; Keasling Jay D
A propionate-inducible expression system for enteric bacteria.
Applied and environmental microbiology 2005;71(11):6856-62.
2005: Wang Kai; Keasling Jay D; Muller Susan J
Effects of the sequence and size of non-polar residues on self-assembly of amphiphilic peptides.
International journal of biological macromolecules 2005;36(4):232-40.
2005: Kang Min Jung; Lee Young Mi; Yoon Sang Hwal; Kim Jung Heon; Ock So Won; Jung Kyung Hwa; Shin Yong Chul; Keasling Jay D; Kim Seon Won
Identification of genes affecting lycopene accumulation in Escherichia coli using a shot-gun method.
Biotechnology and bioengineering 2005;91(5):636-42.
2005: Lee Sung Kuk; Newman Jack D; Keasling Jay D
Catabolite repression of the propionate catabolic genes in Escherichia coli and Salmonella enterica: evidence for involvement of the cyclic AMP receptor protein.
Journal of bacteriology 2005;187(8):2793-800.
2005: da Costa Bernardo M T; Keasling Jay D; Cornish Katrina
Regulation of rubber biosynthetic rate and molecular weight in Hevea brasiliensis by metal cofactor.
Biomacromolecules 2005;6(1):279-89.
2004: Renninger Neil; Knopp Roger; Nitsche Heino; Clark Douglas S; Keasling Jay D
Uranyl precipitation by Pseudomonas aeruginosa via controlled polyphosphate metabolism.
Applied and environmental microbiology 2004;70(12):7404-12.
2004: Reichmuth David S; Blanch Harvey W; Keasling Jay D
Dibenzothiophene biodesulfurization pathway improvement using diagnostic GFP fusions.
Biotechnology and bioengineering 2004;88(1):94-9.
2004: Reiling K Kinkead; Yoshikuni Yasuo; Martin Vincent J J; Newman Jack; Bohlmann Jörg; Keasling Jay D
Mono and diterpene production in Escherichia coli.
Biotechnology and bioengineering 2004;87(2):200-12.
2004: Maharbiz Michel M; Holtz William J; Howe Roger T; Keasling Jay D
Microbioreactor arrays with parametric control for high-throughput experimentation.
Biotechnology and bioengineering 2004;86(4):485-90.
2004: Maharbiz Michel M; Holtz William J; Howe Roger T; Keasling Jay D
Microbioreactor arrays with parametric control for high-throughput experimentation.
Biotechnology and bioengineering 2004;85(4):376-81.
2003: Khosla Chaitan; Keasling Jay D
Metabolic engineering for drug discovery and development.
Nature reviews. Drug discovery 2003;2(12):1019-25.
2003: Aldor Ilana S; Keasling Jay D
Process design for microbial plastic factories: metabolic engineering of polyhydroxyalkanoates.
Current opinion in biotechnology 2003;14(5):475-83.
2003: Chang Ivan; Gilbert Eric S; Eliashberg Natalya; Keasling Jay D
A three-dimensional, stochastic simulation of biofilm growth and transport-related factors that affect structure.
Microbiology (Reading, England) 2003;149(Pt 10):2859-71.
2003: Scott Deborah J; da Costa Bernardo M T; Espy Stephanie C; Keasling Jay D; Cornish Katrina
Activation and inhibition of rubber transferases by metal cofactors and pyrophosphate substrates.
Phytochemistry 2003;64(1):123-34.
2003: Martin Vincent J J; Pitera Douglas J; Withers Sydnor T; Newman Jack D; Keasling Jay D
Engineering a mevalonate pathway in Escherichia coli for production of terpenoids.
Nature biotechnology 2003;21(7):796-802.
2003: Knopp Roger; Panak Petra J; Wray Lewis A; Renninger Neil S; Keasling Jay D; Nitsche Heino
Laser spectroscopic studies of interactions of UVI with bacterial phosphate species.
Chemistry (Weinheim an der Bergstrasse, Germany) 2003;9(12):2812-8.
2003: Gilbert E S; Walker A W; Keasling J D
A constructed microbial consortium for biodegradation of the organophosphorus insecticide parathion.
Applied microbiology and biotechnology 2003;61(1):77-81.
2003: Tehara Sundiep K; Keasling Jay D
Gene Cloning, purification, and characterization of a phosphodiesterase from Delftia acidovorans.
Applied and environmental microbiology 2003;69(1):504-8.
2002: Smolke Christina D; Keasling Jay D
Effect of gene location, mRNA secondary structures, and RNase sites on expression of two genes in an engineered operon.
Biotechnology and bioengineering 2002;80(7):762-76.
2002: McMahon Katherine D; Dojka Michael A; Pace Norman R; Jenkins David; Keasling Jay D
Polyphosphate kinase from activated sludge performing enhanced biological phosphorus removal.
Applied and environmental microbiology 2002;68(10):4971-8.
2002: Magyarosy Andrew; Ho Jonathan Z; Rapoport Henry; Dawson Scott; Hancock Joe; Keasling Jay D
Chlorxanthomycin, a fluorescent, chlorinated, pentacyclic pyrene from a Bacillus sp.
Applied and environmental microbiology 2002;68(8):4095-101.
2002: Aldor Ilana S; Kim Seon-Won; Prather Kristala L Jones; Keasling Jay D
Metabolic engineering of a novel propionate-independent pathway for the production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) in recombinant Salmonella enterica serovar typhimurium.
Applied and environmental microbiology 2002;68(8):3848-54.
2002: Wang Guang-Yi; Keasling Jay D
Amplification of HMG-CoA reductase production enhances carotenoid accumulation in Neurospora crassa.
Metabolic engineering 2002;4(3):193-201.
2002: Magyarosy A; Laidlaw R D; Kilaas R; Echer C; Clark D S; Keasling J D
Nickel accumulation and nickel oxalate precipitation by Aspergillus niger.
Applied microbiology and biotechnology 2002;59(2-3):382-8.
2002: Goeden-Wood Nichole L; Conticello Vincent P; Muller Susan J; Keasling Jay D
Improved assembly of multimeric genes for the biosynthetic production of protein polymers.
Biomacromolecules 2002;3(4):874-9.
2002: Khlebnikov A; Skaug T; Keasling Jay D
Modulation of gene expression from the arabinose-inducible araBAD promoter.
Journal of industrial microbiology & biotechnology 2002;29(1):34-7.
2002: Walker Andy W; Keasling Jay D
Metabolic engineering of Pseudomonas putida for the utilization of parathion as a carbon and energy source.
Biotechnology and bioengineering 2002;78(7):715-21.
2002: Khlebnikov Artem; Keasling Jay D
Effect of lacY expression on homogeneity of induction from the P(tac) and P(trc) promoters by natural and synthetic inducers.
Biotechnology progress 2002;18(3):672-4.
2002: Smolke Christina D; Keasling Jay D
Effect of copy number and mRNA processing and stabilization on transcript and protein levels from an engineered dual-gene operon.
Biotechnology and bioengineering 2002;78(4):412-24.
2002: McMahon K D; Jenkins D; Keasling J D
Polyphosphate kinase genes from activated sludge carrying out enhanced biological phosphorus removal.
Water science and technology : a journal of the International Association on Water Pollution Research 2002;46(1-2):155-62.
2001: Smolke C D; Khlebnikov A; Keasling J D
Effects of transcription induction homogeneity and transcript stability on expression of two genes in a constructed operon.
Applied microbiology and biotechnology 2001;57(5-6):689-96.
2001: Martin V J; Yoshikuni Y; Keasling J D
The in vivo synthesis of plant sesquiterpenes by Escherichia coli.
Biotechnology and bioengineering 2001;75(5):497-503.
2001: Khlebnikov A; Datsenko K A; Skaug T; Wanner B L; Keasling J D
Homogeneous expression of the P(BAD) promoter in Escherichia coli by constitutive expression of the low-affinity high-capacity AraE transporter.
Microbiology (Reading, England) 2001;147(Pt 12):3241-7.
2001: Gilbert E S; Khlebnikov A; Cowan S E; Keasling J D
Analysis of biofilm structure and gene expression using fluorescence dual labeling.
Biotechnology progress 2001;17(6):1180-2.
2001: Wang C L; Clark D S; Keasling J D
Analysis of an engineered sulfate reduction pathway and cadmium precipitation on the cell surface.
Biotechnology and bioengineering 2001;75(3):285-91.
2001: Smolke C D; Martin V J; Keasling J D
Controlling the metabolic flux through the carotenoid pathway using directed mRNA processing and stabilization.
Metabolic engineering 2001;3(4):313-21.
2001: Aldor I; Keasling J D
Metabolic engineering of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) composition in recombinant Salmonella enterica serovar typhimurium.
Biotechnology and bioengineering 2001;76(2):108-14.
2001: Wang C L; Lum A M; Ozuna S C; Clark D S; Keasling J D
Aerobic sulfide production and cadmium precipitation by Escherichia coli expressing the Treponema denticola cysteine desulfhydrase gene.
Applied microbiology and biotechnology 2001;56(3-4):425-30.
2001: Kim S W; Keasling J D
Metabolic engineering of the nonmevalonate isopentenyl diphosphate synthesis pathway in Escherichia coli enhances lycopene production.
Biotechnology and bioengineering 2001;72(4):408-15.
2001: Renninger N; McMahon K D; Knopp R; Nitsche H; Clark D S; Keasling J D
Uranyl precipitation by biomass from an enhanced biological phosphorus removal reactor.
Biodegradation 2001;12(6):401-10.
2000: Smolke C D; Carrier T A; Keasling J D
Coordinated, differential expression of two genes through directed mRNA cleavage and stabilization by secondary structures.
Applied and environmental microbiology 2000;66(12):5399-405.
2000: Khlebnikov A; Risa O; Skaug T; Carrier T A; Keasling J D
Regulatable arabinose-inducible gene expression system with consistent control in all cells of a culture.
Journal of bacteriology 2000;182(24):7029-34.
2000: Jones K L; Kim S W; Keasling J D
Low-copy plasmids can perform as well as or better than high-copy plasmids for metabolic engineering of bacteria.
Metabolic engineering 2000;2(4):328-38.
2000: Wang C L; Maratukulam P D; Lum A M; Clark D S; Keasling J D
Metabolic engineering of an aerobic sulfate reduction pathway and its application to precipitation of cadmium on the cell surface.
Applied and environmental microbiology 2000;66(10):4497-502.
2000: Cowan S E; Gilbert E; Liepmann D; Keasling J D
Commensal interactions in a dual-species biofilm exposed to mixed organic compounds.
Applied and environmental microbiology 2000;66(10):4481-5.
2000: Bolesch D G; Keasling J D
Polyphosphate binding and chain length recognition of Escherichia coli exopolyphosphatase.
The Journal of biological chemistry 2000;275(43):33814-9.
2000: Bang S W; Clark D S; Keasling J D
Engineering hydrogen sulfide production and cadmium removal by expression of the thiosulfate reductase gene (phsABC) from Salmonella enterica serovar typhimurium in Escherichia coli.
Applied and environmental microbiology 2000;66(9):3939-44.
2000: Bolesch D G; Keasling J D
The effect of monovalent ions on polyphosphate binding to Escherichia coli exopolyphosphatase.
Biochemical and biophysical research communications 2000;274(1):236-41.
2000: Keasling J D; Van Dien S J; Trelstad P; Renninger N; McMahon K
Application of polyphosphate metabolism to environmental and biotechnological problems.
Biochemistry. Biokhimii?a 2000;65(3):324-31.
2000: Cowan S E; Gilbert E; Khlebnikov A; Keasling J D
Dual labeling with green fluorescent proteins for confocal microscopy.
Applied and environmental microbiology 2000;66(1):413-8.
2000: Reichmuth D S; Hittle J L; Blanch H W; Keasling J D
Biodesulfurization of dibenzothiophene in Escherichia coli is enhanced by expression of a Vibrio harveyi oxidoreductase gene.
Biotechnology and bioengineering 2000;67(1):72-9.
1999: Carrier T A; Keasling J D
Investigating autocatalytic gene expression systems through mechanistic modeling.
Journal of theoretical biology 1999;201(1):25-36.
1999: Keasling J D
Gene-expression tools for the metabolic engineering of bacteria.
Trends in biotechnology 1999;17(11):452-60.
1999: Trelstad P L; Purdhani P; Geissdörfer W; Hillen W; Keasling J D
Polyphosphate kinase of Acinetobacter sp. strain ADP1: purification and characterization of the enzyme and its role during changes in extracellular phosphate levels.
Applied and environmental microbiology 1999;65(9):3780-6.
1999: Cowan S E; Black J; Keasling J D; White R M
Ultrasonic flexural-plate-wave sensor for detecting the concentration of settling E. coli W3110 cells.
Analytical chemistry 1999;71(16):3622-5.
1999: Van Dien S J; Keasling J D
Effect of polyphosphate metabolism on the Escherichia coli phosphate-starvation response.
Biotechnology progress 1999;15(4):587-93.
1999: Nielsen R B; Keasling J D
Reductive dechlorination of chlorinated ethene DNAPLs by a culture enriched from contaminated groundwater.
Biotechnology and bioengineering 1999;62(2):160-5.
1999: Carrier T A; Keasling J D
Library of synthetic 5' secondary structures to manipulate mRNA stability in Escherichia coli.
Biotechnology progress 1999;15(1):58-64.
1998: Pramanik J; Keasling J D
Effect of Escherichia coli biomass composition on central metabolic fluxes predicted by a stoichiometric model.
Biotechnology and bioengineering 1998;60(2):230-8.
1998: Carrier T; Jones K L; Keasling J D
mRNA stability and plasmid copy number effects on gene expression from an inducible promoter system.
Biotechnology and bioengineering 1998;59(6):666-72.
1998: Jones K L; Keasling J D
Construction and characterization of F plasmid-based expression vectors.
Biotechnology and bioengineering 1998;59(6):659-65.
1998: Cooper S; Keasling J D
Cycle-specific replication of chromosomal and F-plasmid origins.
FEMS microbiology letters 1998;163(2):217-22.
1998: Keasling J D; Van Dien S J; Pramanik J
Engineering polyphosphate metabolism in Escherichia coli: implications for bioremediation of inorganic contaminants.
Biotechnology and bioengineering 1998;58(2-3):231-9.
1998: Van Dien S J; Keasling J D
A dynamic model of the Escherichia coli phosphate-starvation response.
Journal of theoretical biology 1998;190(1):37-49.
1997: Pramanik J; Keasling J D
Stoichiometric model of Escherichia coli metabolism: Incorporation of growth-rate dependent biomass composition and mechanistic energy requirements.
Biotechnology and bioengineering 1997;56(4):398-421.
1997: Keasling J D
Regulation of intracellular toxic metals and other cations by hydrolysis of polyphosphate.
Annals of the New York Academy of Sciences 1997;829():242-9.
1997: Szykowny D; Keasling J D
Kinetics of BTEX degradation by a nitrate-reducing mixed culture.
Annals of the New York Academy of Sciences 1997;829():135-41.
1997: Bolesch D G; Nielsen R B; Keasling J D
Complete reductive dechlorination of trichloroethene by a groundwater microbial consortium.
Annals of the New York Academy of Sciences 1997;829():97-102.
1997: Carrier T A; Keasling J D
Controlling messenger RNA stability in bacteria: strategies for engineering gene expression.
Biotechnology progress 1997;13(6):699-708.
1997: Carrier T A; Keasling J D
Mechanistic modeling of prokaryotic mRNA decay.
Journal of theoretical biology 1997;189(2):195-209.
1997: Wang C L; Michels P C; Dawson S C; Kitisakkul S; Baross J A; Keasling J D; Clark D S
Cadmium removal by a new strain of Pseudomonas aeruginosa in aerobic culture.
Applied and environmental microbiology 1997;63(10):4075-8.
1997: Carrier T A; Keasling J D
Engineering mRNA stability in E. coli by the addition of synthetic hairpins using a 5' cassette system.
Biotechnology and bioengineering 1997;55(3):577-80.
1997: Elmén J; Pan W; Leung S Y; Magyarosy A; Keasling J D
Kinetics of toluene degradation by a nitrate-reducing bacterium isolated from a groundwater aquifer.
Biotechnology and bioengineering 1997;55(1):82-90.
1997: Van Dien S J; Keyhani S; Yang C; Keasling J D
Manipulation of independent synthesis and degradation of polyphosphate in Escherichia coli for investigation of phosphate secretion from the cell.
Applied and environmental microbiology 1997;63(5):1689-95.
1997: Wong P; Gladney S; Keasling J D
Mathematical model of the lac operon: inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose.
Biotechnology progress 1997;13(2):132-43.
1996: Kuo H; Keasling J D
A Monte Carlo simulation of plasmid replication during the bacterial division cycle.
Biotechnology and bioengineering 1996;52(6):633-47.
1996: Sharfstein S T; van Dien S J; Keasling J D
Modulation of the phosphate-starvation response in Escherichia coli by genetic manipulation of the polyphosphate pathways.
Biotechnology and bioengineering 1996;51(4):434-8.
1996: Keasling J D; Hupf G A
Genetic manipulation of polyphosphate metabolism affects cadmium tolerance in Escherichia coli.
Applied and environmental microbiology 1996;62(2):743-6.
1996: Shapiro N; Keasling J D
The recA gene and cadmium toxicity in Escherichia coli K12.
Microbios 1996;86(346):23-6.
1995: Keasling J D; Kuo H; Vahanian G
A Monte Carlo simulation of the Escherichia coli cell cycle.
Journal of theoretical biology 1995;176(3):411-30.
1994: Sharfstein S T; Keasling J D
Polyphosphate metabolism in Escherichia coli.
Annals of the New York Academy of Sciences 1994;745():77-91.
1994: Hupp T R; Keasling J D; Cooper S; Kaguni J M
Synthesis of DnaK protein during the division cycle of Escherichia coli.
Research in microbiology 1994;145(2):99-109.
1993: Keasling J D; Bertsch L; Kornberg A
Guanosine pentaphosphate phosphohydrolase of Escherichia coli is a long-chain exopolyphosphatase.
Proceedings of the National Academy of Sciences of the United States of America 1993;90(15):7029-33.
1992: Keasling J D; Palsson B O; Cooper S
Replication of prophage P1 is cell-cycle specific.
Journal of bacteriology 1992;174(13):4457-62.
1992: Keasling J D; Palsson B O; Cooper S
Replication of mini-F plasmids during the bacterial division cycle.
Research in microbiology 1992;143(6):541-8.
1992: Keasling J D; Palsson B O; Cooper S
Replication of the R6K plasmid during the Escherichia coli cell cycle.
Journal of bacteriology 1992;174(3):1060-2.
1991: Keasling J D; Palsson B O; Cooper S
Cell-cycle-specific F plasmid replication: regulation by cell size control of initiation.
Journal of bacteriology 1991;173(8):2673-80.
1990: Palsson B O; Keasling J D; Emerson S G
The regulatory mechanisms of human immunodeficiency virus replication predict multiple expression rates.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(2):772-6.
1989: Keasling J D; Palsson B O
ColE1 plasmid replication: a simple kinetic description from a structured model.
Journal of theoretical biology 1989;141(4):447-61.
1989: Keasling J D; Palsson B O
On the kinetics of plasmid replication.
Journal of theoretical biology 1989;136(4):487-92.

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