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Tom Kerppola

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Huai Deng; Tom K Kerppola
Regulation of Drosophila metamorphosis by xenobiotic response regulators.
Veronica Burns; Tom K Kerppola
Opposite orientations of a transcription factor heterodimer bind DNA cooperatively with interaction partners but have different effects on interferon-β gene transcription.
Paul M Jenkins; Tom K Kerppola; Arun Anantharam; Kristin L Arendt; Cynthia J L Carruthers; Ronald W Holz; Jorge A Iniguez-Lluhi; Jeremy C McIntyre; Michael Mark Alexander Sutton; Eileen D Vesely; Lian Zhang; Jeffrey R Martens
Subunit-dependent axonal trafficking of distinct alpha heteromeric potassium channel complexes.

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All Publications

2013: Huai Deng; Tom K Kerppola
Regulation of Drosophila metamorphosis by xenobiotic response regulators.
PLoS genetics 2013;9(2):e1003263.
2012: Veronica Burns; Tom K Kerppola
Opposite orientations of a transcription factor heterodimer bind DNA cooperatively with interaction partners but have different effects on interferon-β gene transcription.
The Journal of biological chemistry 2012;287(38):31833-44.
2011: Paul M Jenkins; Tom K Kerppola; Arun Anantharam; Kristin L Arendt; Cynthia J L Carruthers; Ronald W Holz; Jorge A Iniguez-Lluhi; Jeremy C McIntyre; Michael Mark Alexander Sutton; Eileen D Vesely; Lian Zhang; Jeffrey R Martens
Subunit-dependent axonal trafficking of distinct alpha heteromeric potassium channel complexes.
The Journal of neuroscience : the official journal of the Society for Neuroscience 2011;31(37):13224-35.
2011: Shoumei Bai; Tom K Kerppola
Opposing roles of FoxP1 and Nfat3 in transcriptional control of cardiomyocyte hypertrophy.
Molecular and cellular biology 2011;31(14):3068-80.
2011: Xiaojun Ren; Tom K Kerppola
REST interacts with Cbx proteins and regulates polycomb repressive complex 1 occupancy at RE1 elements.
Molecular and cellular biology 2011;31(10):2100-10.
2011: Sebastián Susperreguy; Luciana P Prendes; María A Desbats; Nancy L Charó; Karen Brown; Ormond A MacDougald; Tom K Kerppola; Jessica Schwartz; Graciela Piwien-Pilipuk
Visualization by BiFC of different C/EBPβ dimers and their interaction with HP1α reveals a differential subnuclear distribution of complexes in living cells.
Experimental cell research 2011;317(6):706-23.
2010: Ho-Pi Lin; Claudius Vincenz; Kevin W Eliceiri; Tom K Kerppola; Brenda M Ogle
Bimolecular fluorescence complementation analysis of eukaryotic fusion products.
Biology of the cell / under the auspices of the European Cell Biology Organization 2010;102(9):525-37.
2009: Aaron M Robida; Tom K Kerppola
Bimolecular fluorescence complementation analysis of inducible protein interactions: effects of factors affecting protein folding on fluorescent protein fragment association.
Journal of molecular biology 2009;394(3):391-409.
2009: Tom K Kerppola
Polycomb group complexes--many combinations, many functions.
Trends in cell biology 2009;19(12):692-704.
2009: Tom K Kerppola
Visualization of molecular interactions using bimolecular fluorescence complementation analysis: characteristics of protein fragment complementation.
Chemical Society reviews 2009;38(10):2876-86.
2009: Susan M Hiatt; Holli M Duren; Y John Shyu; Ronald E. Ellis; Naoki Hisamoto; Kunihiro Matsumoto; Ken-Ichi Kariya; Tom K Kerppola; Chang-Deng Hu
Caenorhabditis elegans FOS-1 and JUN-1 regulate plc-1 expression in the spermatheca to control ovulation.
Molecular biology of the cell 2009;20(17):3888-95.
2008: Hiromi Ikeda; Tom K Kerppola
Lysosomal localization of ubiquitinated Jun requires multiple determinants in a lysine-27-linked polyubiquitin conjugate.
Molecular biology of the cell 2008;19(11):4588-601.
2008: Claudius Vincenz; Tom K Kerppola
Different polycomb group CBX family proteins associate with distinct regions of chromatin using nonhomologous protein sequences.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(43):16572-7.
2008: Tom K Kerppola
Overcoming uncertainty through advances in fluorescence imaging of molecular processes in cells.
Methods (San Diego, Calif.) 2008;45(3):183-4.
2008: Xiaojun Ren; Claudius Vincenz; Tom K Kerppola
Changes in the distributions and dynamics of polycomb repressive complexes during embryonic stem cell differentiation.
Molecular and cellular biology 2008;28(9):2884-95.
2008: Tom K Kerppola
Bimolecular fluorescence complementation (BiFC) analysis as a probe of protein interactions in living cells.
Annual review of biophysics 2008;37():465-87.
2008: Y John Shyu; Susan M Hiatt; Holli M Duren; Ronald E. Ellis; Tom K Kerppola; Chang-Deng Hu
Visualization of protein interactions in living Caenorhabditis elegans using bimolecular fluorescence complementation analysis.
Nature protocols 2008;3(4):588-96.
2008: Tom K Kerppola
Bimolecular fluorescence complementation: visualization of molecular interactions in living cells.
Methods in cell biology 2008;85():431-70.
2006: Tom K Kerppola
Complementary methods for studies of protein interactions in living cells.
Nature methods 2006;3(12):969-71.
2006: Tom K Kerppola
Visualization of molecular interactions by fluorescence complementation.
Nature reviews. Molecular cell biology 2006;7(6):449-56.
2006: Chang-Deng Hu; Asya V Grinberg; Tom K Kerppola
Visualization of protein interactions in living cells using bimolecular fluorescence complementation (BiFC) analysis.
Current protocols in cell biology / editorial board, Juan S. Bonifacino ... [et al.] 2006;Chapter 21():Unit 21.3.
2006: Tom K Kerppola
Design and implementation of bimolecular fluorescence complementation (BiFC) assays for the visualization of protein interactions in living cells.
Nature protocols 2006;1(3):1278-86.
2005: Chang-Deng Hu; Asya V Grinberg; Tom K Kerppola
Visualization of protein interactions in living cells using bimolecular fluorescence complementation (BiFC) analysis.
Current protocols in protein science / editorial board, John E. Coligan ... [et al.] 2005;Chapter 19():Unit 19.10.
2004: Deyu Fang; Tom K Kerppola
Ubiquitin-mediated fluorescence complementation reveals that Jun ubiquitinated by Itch/AIP4 is localized to lysosomes.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(41):14782-7.
2004: Nirmala Rajaram; Tom K Kerppola
Synergistic transcription activation by Maf and Sox and their subnuclear localization are disrupted by a mutation in Maf that causes cataract.
Molecular and cellular biology 2004;24(13):5694-709.
2004: Asya V Grinberg; Chang-Deng Hu; Tom K Kerppola
Visualization of Myc/Max/Mad family dimers and the competition for dimerization in living cells.
Molecular and cellular biology 2004;24(10):4294-308.
2003: Natalie von der Lehr; Sara Johansson; Siqin Wu; Fuad Bahram; Alina Castell; Cihan Cetinkaya; Per Hydbring; Ingrid Weidung; Keiko Nakayama; Keiichi I Nakayama; Ola Söderberg; Tom K Kerppola; Lars-Gunnar Larsson
The F-box protein Skp2 participates in c-Myc proteosomal degradation and acts as a cofactor for c-Myc-regulated transcription.
Molecular cell 2003;11(5):1189-200.
2003: Chang-Deng Hu; Tom K Kerppola
Simultaneous visualization of multiple protein interactions in living cells using multicolor fluorescence complementation analysis.
Nature biotechnology 2003;21(5):539-45.
2003: Asya V Grinberg; Tom K Kerppola
Both Max and TFE3 cooperate with Smad proteins to bind the plasminogen activator inhibitor-1 promoter, but they have opposite effects on transcriptional activity.
The Journal of biological chemistry 2003;278(13):11227-36.
2003: Vladimir Ramirez-Carrozzi; Tom K Kerppola
Asymmetric recognition of nonconsensus AP-1 sites by Fos-Jun and Jun-Jun influences transcriptional cooperativity with NFAT1.
Molecular and cellular biology 2003;23(5):1737-49.
2002: Alexandru F Ghetu; David C Arthur; Tom K Kerppola; J N Mark Glover
Probing FinO-FinP RNA interactions by site-directed protein-RNA crosslinking and gelFRET.
RNA (New York, N.Y.) 2002;8(6):816-23.
2002: Chang-Deng Hu; Yurii Chinenov; Tom K Kerppola
Visualization of interactions among bZIP and Rel family proteins in living cells using bimolecular fluorescence complementation.
Molecular cell 2002;9(4):789-98.
2001: Vladimir Ramirez-Carrozzi; Tom K Kerppola
Gel-based fluorescence resonance energy transfer (gelFRET) analysis of nucleoprotein complex architecture.
Methods (San Diego, Calif.) 2001;25(1):31-43.
2001: Tom K Kerppola
The bright future of fluorescence.
Methods (San Diego, Calif.) 2001;25(1):1-3.
2001: Vladimir Ramirez-Carrozzi; Tom K Kerppola
Control of the orientation of Fos-Jun binding and the transcriptional cooperativity of Fos-Jun-NFAT1 complexes.
The Journal of biological chemistry 2001;276(24):21797-808.
2001: Yurii Chinenov; Tom K Kerppola
Close encounters of many kinds: Fos-Jun interactions that mediate transcription regulatory specificity.
Oncogene 2001;20(19):2438-52.
2001: Vladimir Ramirez-Carrozzi; Tom K Kerppola
Dynamics of Fos-Jun-NFAT1 complexes.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(9):4893-8.
2001: Mensur Dlakic; Asya V Grinberg; DA Leonard; Tom K Kerppola
DNA sequence-dependent folding determines the divergence in binding specificities between Maf and other bZIP proteins.
The EMBO journal 2001;20(4):828-40.
2001: Vladimir Ramirez-Carrozzi; Tom K Kerppola
Long-range electrostatic interactions influence the orientation of Fos-Jun binding at AP-1 sites.
Journal of molecular biology 2001;305(3):411-27.
1998: DA Leonard; Tom K Kerppola
DNA bending determines Fos-Jun heterodimer orientation.
Nature structural biology 1998;5(10):877-81.
1998: R J Diebold; Nirmala Rajaram; DA Leonard; Tom K Kerppola
Molecular basis of cooperative DNA bending and oriented heterodimer binding in the NFAT1-Fos-Jun-ARRE2 complex.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(14):7915-20.
1998: Tom K Kerppola
Transcriptional cooperativity: bending over backwards and doing the flip.
Structure (London, England : 1993) 1998;6(5):549-54.
1997: Tom K Kerppola
Comparison of DNA bending by Fos-Jun and phased A tracts by multifactorial phasing analysis.
Biochemistry 1997;36(36):10872-84.
1997: Nirmala Rajaram; Tom K Kerppola
DNA bending by Fos-Jun and the orientation of heterodimer binding depend on the sequence of the AP-1 site.
The EMBO journal 1997;16(10):2917-25.
1997: Tom K Kerppola; T Curran
The transcription activation domains of Fos and Jun induce DNA bending through electrostatic interactions.
The EMBO journal 1997;16(10):2907-16.
1997: DA Leonard; Nirmala Rajaram; Tom K Kerppola
Structural basis of DNA bending and oriented heterodimer binding by the basic leucine zipper domains of Fos and Jun.
Proceedings of the National Academy of Sciences of the United States of America 1997;94(10):4913-8.
1996: L A Penix; M T Sweetser; W M Weaver; J P Hoeffler; Tom K Kerppola; Christopher B Wilson
The proximal regulatory element of the interferon-gamma promoter mediates selective expression in T cells.
The Journal of biological chemistry 1996;271(50):31964-72.
1996: K Ito; M Asano; P Hughes; Hidetsugu Kohzaki; C Masutani; F Hanaoka; Tom K Kerppola; T Curran; Yota Murakami; Y Ito
c-Jun stimulates origin-dependent DNA unwinding by polyomavirus large Tantigen.
The EMBO journal 1996;15(20):5636-46.
1996: Tom K Kerppola
Fos and Jun bend the AP-1 site: effects of probe geometry on the detection of protein-induced DNA bending.
Proceedings of the National Academy of Sciences of the United States of America 1996;93(19):10117-22.
1995: L M Robertson; Tom K Kerppola; M Vendrell; D Luk; Richard J Smeyne; C Bocchiaro; J I Morgan; Tom Curran
Regulation of c-fos expression in transgenic mice requires multiple interdependent transcription control elements.
Neuron 1995;14(2):241-52.
1995: Tom K Kerppola; T Curran
Transcription. Zen and the art of Fos and Jun.
Nature 1995;373(6511):199-200.
1994: Tom K Kerppola; Tom Curran
A conserved region adjacent to the basic domain is required for recognition of an extended DNA binding site by Maf/Nrl family proteins.
Oncogene 1994;9(11):3149-58.
1994: N R Yaseen; J Park; Tom K Kerppola; T Curran; S Sharma
A central role for Fos in human B- and T-cell NFAT (nuclear factor of activated T cells): an acidic region is required for in vitro assembly.
Molecular and cellular biology 1994;14(10):6886-95.
1994: L R Patel; Tom Curran; Tom K Kerppola
Energy transfer analysis of Fos-Jun dimerization and DNA binding.
Proceedings of the National Academy of Sciences of the United States of America 1994;91(15):7360-4.
1994: Tom K Kerppola; Tom Curran
Maf and Nrl can bind to AP-1 sites and form heterodimers with Fos and Jun.
Oncogene 1994;9(3):675-84.
1994: W Hsu; Tom K Kerppola; Phang-Lang Chen; Tom Curran; S Chen-Kiang
Fos and Jun repress transcription activation by NF-IL6 through association at the basic zipper region.
Molecular and cellular biology 1994;14(1):268-76.
1993: P G McCaffrey; C Luo; Tom K Kerppola; J Jain; T M Badalian; A M Ho; E Burgeon; William Stratton Lane; J N Lambert; T Curran
Isolation of the cyclosporin-sensitive T cell transcription factor NFATp.
Science (New York, N.Y.) 1993;262(5134):750-4.
1993: J Jain; P G McCaffrey; Z Miner; Tom K Kerppola; J N Lambert; Gregory L Verdine; T Curran; Anjana Rao
The T-cell transcription factor NFATp is a substrate for calcineurin and interacts with Fos and Jun.
Nature 1993;365(6444):352-5.
1993: Tom K Kerppola; Tom Curran
Selective DNA bending by a variety of bZIP proteins.
Molecular and cellular biology 1993;13(9):5479-89.
1993: Tom K Kerppola; D Luk; Tom Curran
Fos is a preferential target of glucocorticoid receptor inhibition of AP-1 activity in vitro.
Molecular and cellular biology 1993;13(6):3782-91.
1993: Tom Curran; C Abate; S Baker; Tom K Kerppola; S Xanthoudakis
The regulation of c-fos: too much is never enough.
Advances in second messenger and phosphoprotein research 1993;28():271-7.
1992: S J Baker; Tom K Kerppola; D Luk; M T Vandenberg; D R Marshak; Tom Curran; C Abate
Jun is phosphorylated by several protein kinases at the same sites that are modified in serum-stimulated fibroblasts.
Molecular and cellular biology 1992;12(10):4694-705.
1991: Tom K Kerppola; Tom Curran
DNA bending by Fos and Jun: the flexible hinge model.
Science (New York, N.Y.) 1991;254(5035):1210-4.
1991: Tom K Kerppola; Caroline M Kane
RNA polymerase: regulation of transcript elongation and termination.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology 1991;5(13):2833-42.
1991: Tom K Kerppola; Tom Curran
Fos-Jun heterodimers and Jun homodimers bend DNA in opposite orientations: implications for transcription factor cooperativity.
Cell 1991;66(2):317-26.
1990: Tom K Kerppola; Caroline M Kane
Analysis of the signals for transcription termination by purified RNA polymerase II.
Biochemistry 1990;29(1):269-78.
1988: Tom K Kerppola; Caroline M Kane
Intrinsic sites of transcription termination and pausing in the c-myc gene.
Molecular and cellular biology 1988;8(10):4389-94.
1988: Tom K Kerppola; Michael L Kahn
Symbiotic phenotypes of auxotrophic mutants of Rhizobium meliloti 104A14.
Journal of general microbiology 1988;134(4):913-9.
1988: Tom K Kerppola; Michael L Kahn
Genetic analysis of carbamoylphosphate synthesis in Rhizobium meliloti 104A14.
Journal of general microbiology 1988;134(4):921-9.
1987: Tom K Kerppola; T Serwold-Davis; Dennis C Gross; Michael L Kahn
Effect of Increased beta-Glucosidase Activity on Virulence of Erwinia amylovora.
Applied and environmental microbiology 1987;53(4):677-82.