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Nikolai Khodarev

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Nikolai N Khodarev; Bernard Roizman; Ralph R Weichselbaum
Molecular pathways: interferon/stat1 pathway: role in the tumor resistance to genotoxic stress and aggressive growth.
Yves A Lussier; Philip B Paty; Mitchell C Posner; Kelly Regan; Steven J Chmura; Kimberly Corbin; Thomas E Darga; Hanli Fan; Mark K Ferguson; Sabha Ganai; Jennifer Gnerlich; Samuel Hellman; Oleksiy Karpenko; Sajid A Khan; Nikolai N Khodarev; Haiquan Li; Ralph R Weichselbaum
Oligo- and polymetastatic progression in lung metastasis(es) patients is associated with specific microRNAs.
Sean P Pitroda; Harold G Sutton; Randy F Sweis; Wei Zhang; Tong Zhou; Michael A Beckett; Thomas E Darga; Matthew Filippo; Joe G. N. Garcia; Sajid A Khan; Nikolai N Khodarev; Edwardine Labay; Hua Liang; Helena J Mauceri; Samantha Perakis; Ralph R Weichselbaum
Tumor endothelial inflammation predicts clinical outcome in diverse human cancers.

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All Publications

2012: Nikolai N Khodarev; Bernard Roizman; Ralph R Weichselbaum
Molecular pathways: interferon/stat1 pathway: role in the tumor resistance to genotoxic stress and aggressive growth.
Clinical cancer research : an official journal of the American Association for Cancer Research 2012;18(11):3015-21.
2012: Yves A Lussier; Philip B Paty; Mitchell C Posner; Kelly Regan; Steven J Chmura; Kimberly Corbin; Thomas E Darga; Hanli Fan; Mark K Ferguson; Sabha Ganai; Jennifer Gnerlich; Samuel Hellman; Oleksiy Karpenko; Sajid A Khan; Nikolai N Khodarev; Haiquan Li; Ralph R Weichselbaum
Oligo- and polymetastatic progression in lung metastasis(es) patients is associated with specific microRNAs.
PloS one 2012;7(12):e50141.
2012: Sean P Pitroda; Harold G Sutton; Randy F Sweis; Wei Zhang; Tong Zhou; Michael A Beckett; Thomas E Darga; Matthew Filippo; Joe G. N. Garcia; Sajid A Khan; Nikolai N Khodarev; Edwardine Labay; Hua Liang; Helena J Mauceri; Samantha Perakis; Ralph R Weichselbaum
Tumor endothelial inflammation predicts clinical outcome in diverse human cancers.
PloS one 2012;7(10):e46104.
2011: Byron C Burnette; Hua Liang; Youjin Lee; Lukasz Chlewicki; Nikolai N Khodarev; Ralph R Weichselbaum; Yang-Xin Fu; Sogyong L Auh
The efficacy of radiotherapy relies upon induction of type i interferon-dependent innate and adaptive immunity.
Cancer research 2011;71(7):2488-96.
2011: Terry H Wu; Karin Schreiber; Ralph R Weichselbaum; Ainhoa Arina; Elena V Efimova; Nikolai N Khodarev; Donald A Rowley; Hans Schreiber
Progression of cancer from indolent to aggressive despite antigen retention and increased expression of interferon-gamma inducible genes.
Cancer immunity 2011;11():2.
2010: Yuru Meng; Helena J Mauceri; Nikolai N Khodarev; Thomas E Darga; Sean P Pitroda; Michael A Beckett; Donald W Kufe; Ralph R Weichselbaum
Ad.Egr-TNF and local ionizing radiation suppress metastases by interferon-beta-dependent activation of antigen-specific CD8+ T cells.
Molecular therapy : the journal of the American Society of Gene Therapy 2010;18(5):912-20.
2010: Dhara M MacDermed; Nikolai N Khodarev; Sean P Pitroda; Darrin C Edwards; Charles A Pelizzari; Lei Huang; Donald W Kufe; Ralph R Weichselbaum
MUC1-associated proliferation signature predicts outcomes in lung adenocarcinoma patients.
BMC medical genomics 2010;3():16.
2009: Elena V Efimova; Hua Liang; Sean P Pitroda; Edwardine Labay; Thomas E Darga; Vera Levina; Anna Lokshin; Bernard Roizman; Ralph R Weichselbaum; Nikolai N Khodarev
Radioresistance of Stat1 over-expressing tumour cells is associated with suppressed apoptotic response to cytotoxic agents and increased IL6-IL8 signalling.
International journal of radiation biology 2009;85(5):421-31.
2009: Sean P Pitroda; Nikolai N Khodarev; Michael A Beckett; Donald W Kufe; Ralph R Weichselbaum
MUC1-induced alterations in a lipid metabolic gene network predict response of human breast cancers to tamoxifen treatment.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(14):5837-41.
2009: Nikolai N Khodarev; Sean P Pitroda; Michael A Beckett; Dhara M MacDermed; Lei Huang; Donald W Kufe; Ralph R Weichselbaum
MUC1-induced transcriptional programs associated with tumorigenesis predict outcome in breast and lung cancer.
Cancer research 2009;69(7):2833-7.
2009: Sean P Pitroda; Bassam T Wakim; Ravi F Sood; Mara G Beveridge; Michael A Beckett; Dhara M MacDermed; Ralph R Weichselbaum; Nikolai N Khodarev
STAT1-dependent expression of energy metabolic pathways links tumour growth and radioresistance to the Warburg effect.
BMC medicine 2009;7():68.
2009: Nikolai N Khodarev; Paul Roach; Sean P Pitroda; Daniel W Golden; Mihir Bhayani; Michael Y Shao; Thomas E Darga; Mara G Beveridge; Ravi F Sood; Harold G Sutton; Michael A Beckett; Helena J Mauceri; Mitchell C Posner; Ralph R Weichselbaum
STAT1 pathway mediates amplification of metastatic potential and resistance to therapy.
PloS one 2009;4(6):e5821.
2008: Ralph R Weichselbaum; Hemant Ishwaran; Taewon Yoon; Dimitry S A Nuyten; Samuel W Baker; Nikolai N Khodarev; Andy W Su; Arif Y Shaikh; Paul Roach; Bas Kreike; Bernard Roizman; Jonas Bergh; Yudi Pawitan; Marc J van de Vijver; Andy J Minn
An interferon-related gene signature for DNA damage resistance is a predictive marker for chemotherapy and radiation for breast cancer.
Proceedings of the National Academy of Sciences of the United States of America 2008;105(47):18490-5.
2007: Mukta Katdare; Elena V Efimova; Edwardine Labay; Nikolai N Khodarev; Thomas E Darga; Michael C Garofalo; Satoaki Nakamura; Donald Kufe; Mitchell C Posner; Ralph R Weichselbaum
Diverse TNFalpha-induced death pathways are enhanced by inhibition of NF-kappaB.
International journal of oncology 2007;31(6):1519-28.
2007: Nikolai N Khodarev; Andy J Minn; Elena V Efimova; Thomas E Darga; Edwardine Labay; Michael A Beckett; Helena J Mauceri; Bernard Roizman; Ralph R Weichselbaum
Signal transducer and activator of transcription 1 regulates both cytotoxic and prosurvival functions in tumor cells.
Cancer research 2007;67(19):9214-20.
2005: Eric T Kimchi; Mitchell C Posner; James Park; Thomas E Darga; Masha Kocherginsky; Theodore Karrison; John Hart; Kerrington D Smith; James Mezhir; Ralph R Weichselbaum; Nikolai N Khodarev
Progression of Barrett's metaplasia to adenocarcinoma is associated with the suppression of the transcriptional programs of epidermal differentiation.
Cancer research 2005;65(8):3146-54.
2004: Nikolai N Khodarev; Yasushi Kataoka; Jeffrey S Murley; Ralph R Weichselbaum; David J Grdina
Interaction of amifostine and ionizing radiation on transcriptional patterns of apoptotic genes expressed in human microvascular endothelial cells (HMEC).
International journal of radiation oncology, biology, physics 2004;60(2):553-63.
2004: Charles K Brown; Nikolai N Khodarev; Jianqing Yu; Tricia Moo-Young; Edwardine Labay; Thomas E Darga; Mitchell C Posner; Ralph R Weichselbaum; Helena J Mauceri
Glioblastoma cells block radiation-induced programmed cell death of endothelial cells.
FEBS letters 2004;565(1-3):167-70.
2004: Nikolai N Khodarev; Edwardine Labay; Thomas E Darga; Jianqing Yu; Helena J Mauceri; Nalin Gupta; Yasushi Kataoka; Ralph R Weichselbaum
Endothelial cells co-cultured with wild-type and dominant/negative p53-transfected glioblastoma cells exhibit differential sensitivity to radiation-induced apoptosis.
International journal of cancer. Journal international du cancer 2004;109(2):214-9.
2004: Nikolai N Khodarev; Michael A Beckett; Edwardine Labay; Thomas E Darga; Bernard Roizman; Ralph R Weichselbaum
STAT1 is overexpressed in tumors selected for radioresistance and confers protection from radiation in transduced sensitive cells.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(6):1714-9.
2003: Nikolai N Khodarev; Jianqing Yu; Edwardine Labay; Thomas E Darga; Charles K Brown; Helena J Mauceri; Reza Yassari; Nalin Gupta; Ralph R Weichselbaum
Tumour-endothelium interactions in co-culture: coordinated changes of gene expression profiles and phenotypic properties of endothelial cells.
Journal of cell science 2003;116(Pt 6):1013-22.
2003: Nikolai N Khodarev; James Park; Yasushi Kataoka; Edwardine Nodzenski; Samuel Hellman; Bernard Roizman; Ralph R Weichselbaum; Charles A Pelizzari
Receiver operating characteristic analysis: a general tool for DNA array data filtration and performance estimation.
Genomics 2003;81(2):202-9.
2002: Yasushi Kataoka; Jeffrey S Murley; Nikolai N Khodarev; Ralph R Weichselbaum; David J Grdina
Activation of the nuclear transcription factor kappaB (NFkappaB) and differential gene expression in U87 glioma cells after exposure to the cytoprotector amifostine.
International journal of radiation oncology, biology, physics 2002;53(1):180-9.
2002: Nikolai N Khodarev; Jianqing Yu; Edwardine Nodzenski; Jeffrey S Murley; Yasushi Kataoka; Charles K Brown; David J Grdina; Ralph R Weichselbaum
Method of RNA purification from endothelial cells for DNA array experiments.
BioTechniques 2002;32(2):316, 318, 320.
2001: Nikolai N Khodarev; James Park; Jianqing Yu; Nalin Gupta; Edwardine Nodzenski; Bernard Roizman; Ralph R Weichselbaum
Dose-dependent and independent temporal patterns of gene responses to ionizing radiation in normal and tumor cells and tumor xenografts.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(22):12665-70.
2001: Nalin Gupta; Edwardine Nodzenski; Nikolai N Khodarev; Jianqing Yu; Leila Khorasani; Michael A Beckett; Donald Kufe; Ralph R Weichselbaum
Angiostatin effects on endothelial cells mediated by ceramide and RhoA.
EMBO reports 2001;2(6):536-40.
2000: Charles A Pelizzari; Nikolai N Khodarev; N Gupta; Douglas P Calvin; Ralph R Weichselbaum
Quantitative analysis of DNA array autoradiographs.
Nucleic acids research 2000;28(22):4577-81.
2000: Nikolai N Khodarev; T Bennett; N Shearing; I Sokolova; J Koudelik; S Walter; Michael J Villalobos; Andrew T M Vaughan
LINE L1 retrotransposable element is targeted during the initial stages of apoptotic DNA fragmentation.
Journal of cellular biochemistry 2000;79(3):486-95.
1999: Nikolai N Khodarev; Sunil J Advani; Nalin Gupta; Bernard Roizman; Ralph R Weichselbaum
Accumulation of specific RNAs encoding transcriptional factors and stress response proteins against a background of severe depletion of cellular RNAs in cells infected with herpes simplex virus 1.
Proceedings of the National Academy of Sciences of the United States of America 1999;96(21):12062-7.
1999: Nikolai N Khodarev; IA Sokolova; Andrew T M Vaughan
Abortive apoptosis as an initiator of chromosomal translocations.
Medical hypotheses 1999;52(5):373-6.
1998: IA Sokolova; Andrew T M Vaughan; Nikolai N Khodarev
Mycoplasma infection can sensitize host cells to apoptosis through contribution of apoptotic-like endonuclease(s).
Immunology and cell biology 1998;76(6):526-34.
1998: Nikolai N Khodarev; IA Sokolova; Andrew T M Vaughan
Association between DNA cleavage during apoptosis and regions of chromatin replication.
Journal of cellular biochemistry 1998;70(4):604-15.
1998: A Narayana; Nikolai N Khodarev; S Walter; Andrew T M Vaughan
Synchronous block in DNA synthesis initiation with change in chromatin topology mediated by VP16.
DNA and cell biology 1998;17(7):613-9.
1998: Nikolai N Khodarev; IA Sokolova; Andrew T M Vaughan
Mechanisms of induction of apoptotic DNA fragmentation.
International journal of radiation biology 1998;73(5):455-67.
1998: E Krueger; I Sokolova; MC Kamradt; Nikolai N Khodarev; Andrew T M Vaughan
Multiple forms of endonuclease activity linked with radiation induced apoptosis in C4-1 cervical carcinoma cells.
Anticancer research 1998;18(2A):983-8.
1997: Nikolai N Khodarev; A Narayana; A Constantinou; Andrew T M Vaughan
Topologically constrained domains of supercoiled DNA in eukaryotic cells.
DNA and cell biology 1997;16(9):1051-8.
1993: IA Sokolova; A Iu Volgin; T D Smirnova; I P Lupga; Nikolai N Khodarev; SS Shishkin
[Comparative characteristics of some parameters of the cell nucleus in the series myeloma-hybridoma-lymphocyte].
Biokhimii͡a (Moscow, Russia) 1993;58(3):357-66.
1992: IA Sokolova; A U Volgin; N V Makarova; Veronica Victorovna Volgina; SS Shishkin; Nikolai N Khodarev
Internucleosomal chromatin degradation in myeloma and B-hybridoma cell cultures.
FEBS letters 1992;313(3):295-9.
1992: F E Romantsev; Nikolai N Khodarev; I I Votrin
Intermolecular homologies of human interferon-alpha.
Biochemical and biophysical research communications 1992;186(1):211-8.
1989: V A Soldatenkov; M F Denisenko; Nikolai N Khodarev; I I Votrin; I V Filippovich
Early postirradiation chromatin degradation in thymocytes.
International journal of radiation biology 1989;55(6):943-51.
1989: V A Soldatenkov; M F Denisenko; Nikolai N Khodarev; I I Votrin; I V Filippovich
[Characteristics of the degradation of thymus lymphocyte DNA in the early periods after irradiation].
Radiobiologiia 1989;29(3):291-5.
1989: A Iu Morozov; SS Aleksandrova; Nikolai N Khodarev; I I Votrin
[DNA recombination in vitro initiated by Ca/Mg-dependent endonuclease from cell nuclei of human splenocytes].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1989;(4):42-5.
1988: A Iu Morozov; D N Urakov; Nikolai N Khodarev; S M Deev; O L Polianovskiĭ
[Characteristics of the effect of Ca/Mg-dependent endonuclease from cell nuclei of human lymphocytes on J kappa-cluster of immunoglobulin genes].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1988;(11):26-9.
1988: Nikolai N Khodarev; A Iu Morozov; IA Sokolova; SS Aleksandrova; I I Votrin
[Specificity of fragmentation of DNA from pBR322 plasmid by Ca,Mg-dependent endonuclease from cell nuclei of human lymphocytes].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1988;(9):26-32.
1988: IA Sokolova; Nikolai N Khodarev; SS Aleksandrova; I I Votrin
[Isolation and analysis of Ca/Mg-dependent endonuclease from cell nuclei of human splenocytes].
Biokhimii͡a (Moscow, Russia) 1988;53(7):1163-73.
1988: Veronica Victorovna Volgina; Nikolai N Khodarev; A Iu Volgin; I I Votrin; L A Pevnitskiĭ
[Use of monoclonal antibodies in comparative studies of Ca, Mg-dependent endonuclease in cell nuclei].
Biulleten' eksperimental'noĭ biologii i meditsiny 1988;105(4):419-21.
1987: Nikolai N Khodarev; Veronica Victorovna Volgina; SS Aleksandrova; I I Votrin
[Dynamics of the endo-DNAase activity of cell nuclei of mouse thymus and spleen lymphocytes during the immune response].
Biulleten' eksperimental'noĭ biologii i meditsiny 1987;104(12):713-6.
1987: Nikolai N Khodarev; IA Sokolova; SS Aleksandrova; I I Votrin; I V Chupyrina
[Ca/Mg-dependent endonuclease as a probe for detecting chromatin changes in lymphocytes in chronic lymphoid leukemia].
Molekuliarnaia genetika, mikrobiologiia i virusologiia 1987;(9):24-7.
1987: Nikolai N Khodarev; Veronica Victorovna Volgina; D V Korogodin; I I Votrin
[A method of detecting hybridoma-produced antibodies to cell nucleus endonucleases].
Biulleten' eksperimental'noĭ biologii i meditsiny 1987;103(6):762-3.
1987: Nikolai N Khodarev; IA Sokolova; SS Aleksandrova; Veronica Victorovna Volgina; I I Votrin
[Isolation of Ca/Mg-dependent endonuclease of cell nuclei as the basic component in the chromatin nuclease complex of human lymphocytes].
Biulleten' eksperimental'noĭ biologii i meditsiny 1987;103(3):312-4.
1983: Nikolai N Khodarev; T N Ivanova; I I Votrin
[Detection of Ca2+, Mg2+-dependent endonuclease in the nuclei of human peripheral blood lymphocytes and the inhibition of chromatin Ca2+, Mg2+-dependent endonucleolysis in chronic lympholeukemia].
Doklady Akademii nauk SSSR 1983;268(4):1000-3.
1983: I I Votrin; Nikolai N Khodarev; A G Basnak'ian
[Endonucleases as a tool for the analysis of the structural and functional organization of chromatin].
Vestnik Akademii meditsinskikh nauk SSSR 1983;(3):88-95.
1983: Nikolai N Khodarev; IA Sokolova; A A Sokolov; Ia Z Berman; I I Votrin
[Computer analysis of chromatin fragmentation with nucleases].
Biulleten' eksperimental'noĭ biologii i meditsiny 1983;95(1):117-9.
1982: Nikolai N Khodarev; IA Sokolova; I I Votrin
[Quantitative determination of DNA in gels].
Biulleten' eksperimental'noĭ biologii i meditsiny 1982;94(12):40-2.
1982: Nikolai N Khodarev; I I Votrin
[Functional heterogeneity of chromatin fractions isolated by limited hydrolysis of endogenous Ca 2+, Mg 2+ -dependent endonuclease of rat liver nuclei].
Biulleten' eksperimental'noĭ biologii i meditsiny 1982;94(11):37-9.
1981: Nikolai N Khodarev; I I Votrin; S S Debov
[Inhibition of chromatin autolysis in the process of isolating and incubating rat liver cell nuclei].
Voprosy medit͡sinskoĭ khimii 1981;27(4):538-44.
1981: I I Votrin; Nikolai N Khodarev; A G Basnak'ian; Nikolay N Sokolov; A B Fitsner; SS Aleksandrova
[Controlled fragmentation of chromatin DNA by certain endonucleases, their isolation and properties].
Vestnik Akademii meditsinskikh nauk SSSR 1981;(2):59-64.