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Amos Bairoch

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

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Schneider Michel; Lane Lydie; Boutet Emmanuel; Lieberherr Damien; Tognolli Michael; Bougueleret Lydie; Bairoch Amos
The UniProtKB/Swiss-Prot knowledgebase and its Plant Proteome Annotation Program.
Orchard Sandra; Hoogland Christine; Bairoch Amos; Eisenacher Martin; Kraus Hans-Joachim; Binz Pierre-Alain
Managing the data explosion. A report on the HUPO-PSI Workshop. August 2008, Amsterdam, The Netherlands.
Jain Eric; Bairoch Amos; Duvaud Severine; Phan Isabelle; Redaschi Nicole; Suzek Baris E; Martin Maria J; McGarvey Peter; Gasteiger Elisabeth
Infrastructure for the life sciences: design and implementation of the UniProt website.

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All Publications

2009: Schneider Michel; Lane Lydie; Boutet Emmanuel; Lieberherr Damien; Tognolli Michael; Bougueleret Lydie; Bairoch Amos
The UniProtKB/Swiss-Prot knowledgebase and its Plant Proteome Annotation Program.
Journal of proteomics 2009;72(3):567-73.
2009: Orchard Sandra; Hoogland Christine; Bairoch Amos; Eisenacher Martin; Kraus Hans-Joachim; Binz Pierre-Alain
Managing the data explosion. A report on the HUPO-PSI Workshop. August 2008, Amsterdam, The Netherlands.
Proteomics 2009;9(3):499-501.
2009: Jain Eric; Bairoch Amos; Duvaud Severine; Phan Isabelle; Redaschi Nicole; Suzek Baris E; Martin Maria J; McGarvey Peter; Gasteiger Elisabeth
Infrastructure for the life sciences: design and implementation of the UniProt website.
BMC bioinformatics 2009;10():136.
2008: Yip Yum L; Famiglietti Maria; Gos Arnaud; Duek Paula D; David Fabrice P A; Gateau Alain; Bairoch Amos
Annotating single amino acid polymorphisms in the UniProt/Swiss-Prot knowledgebase.
Human mutation 2008;29(3):361-6.
2008: Hulo Nicolas; Bairoch Amos; Bulliard Virginie; Cerutti Lorenzo; Cuche Béatrice A; de Castro Edouard; Lachaize Corinne; Langendijk-Genevaux Petra S; Sigrist Christian J A
The 20 years of PROSITE.
Nucleic acids research 2008;36(Database issue):D245-9.
2008: Mons Barend; Ashburner Michael; Chichester Christine; van Mulligen Erik; Weeber Marc; den Dunnen Johan; van Ommen Gert-Jan; Musen Mark; Cockerill Matthew; Hermjakob Henning; Mons Albert; Packer Abel; Pacheco Roberto; Lewis Suzanna; Berkeley Alfred; Melton William; Barris Nickolas; Wales Jimmy; Meijssen Gerard; Moeller Erik; Roes Peter Jan; Borner Katy; Bairoch Amos
Calling on a million minds for community annotation in WikiProteins.
Genome biology 2008;9(5):R89.
2007: Mulder Nicola J; Apweiler Rolf; Attwood Teresa K; Bairoch Amos; Bateman Alex; Binns David; Bork Peer; Buillard Virginie; Cerutti Lorenzo; Copley Richard; Courcelle Emmanuel; Das Ujjwal; Daugherty Louise; Dibley Mark; Finn Robert; Fleischmann Wolfgang; Gough Julian; Haft Daniel; Hulo Nicolas; Hunter Sarah; Kahn Daniel; Kanapin Alexander; Kejariwal Anish; Labarga Alberto; Langendijk-Genevaux Petra S; Lonsdale David; Lopez Rodrigo; Letunic Ivica; Madera Martin; Maslen John; McAnulla Craig; McDowall Jennifer; Mistry Jaina; Mitchell Alex; Nikolskaya Anastasia N; Orchard Sandra; Orengo Christine; Petryszak Robert; Selengut Jeremy D; Sigrist Christian J A; Thomas Paul D; Valentin Franck; Wilson Derek; Wu Cathy H; Yeats Corin
New developments in the InterPro database.
Nucleic acids research 2007;35(Database issue):D224-8.
2007: Boutet Emmanuel; Lieberherr Damien; Tognolli Michael; Schneider Michel; Bairoch Amos
UniProtKB/Swiss-Prot.
Methods in molecular biology (Clifton, N.J.) 2007;406():89-112.
2006: de Castro Edouard; Sigrist Christian J A; Gattiker Alexandre; Bulliard Virginie; Langendijk-Genevaux Petra S; Gasteiger Elisabeth; Bairoch Amos; Hulo Nicolas
ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins.
Nucleic acids research 2006;34(Web Server issue):W362-5.
2006: Hulo Nicolas; Bairoch Amos; Bulliard Virginie; Cerutti Lorenzo; De Castro Edouard; Langendijk-Genevaux Petra S; Pagni Marco; Sigrist Christian J A
The PROSITE database.
Nucleic acids research 2006;34(Database issue):D227-30.
2006: Wu Cathy H; Apweiler Rolf; Bairoch Amos; Natale Darren A; Barker Winona C; Boeckmann Brigitte; Ferro Serenella; Gasteiger Elisabeth; Huang Hongzhan; Lopez Rodrigo; Magrane Michele; Martin Maria J; Mazumder Raja; O'Donovan Claire; Redaschi Nicole; Suzek Baris
The Universal Protein Resource (UniProt): an expanding universe of protein information.
Nucleic acids research 2006;34(Database issue):D187-91.
2005: Sigrist Christian J A; De Castro Edouard; Langendijk-Genevaux Petra S; Le Saux Virginie; Bairoch Amos; Hulo Nicolas
ProRule: a new database containing functional and structural information on PROSITE profiles.
Bioinformatics (Oxford, England) 2005;21(21):4060-6.
2005: Boeckmann Brigitte; Blatter Marie-Claude; Famiglietti Livia; Hinz Ursula; Lane Lydie; Roechert Bernd; Bairoch Amos
Protein variety and functional diversity: Swiss-Prot annotation in its biological context.
Comptes rendus biologies 2005;328(10-11):882-99.
2005: Schneider Michel; Bairoch Amos; Wu Cathy H; Apweiler Rolf
Plant protein annotation in the UniProt Knowledgebase.
Plant physiology 2005;138(1):59-66.
2005: Jungo Florence; Bairoch Amos
Tox-Prot, the toxin protein annotation program of the Swiss-Prot protein knowledgebase.
Toxicon : official journal of the International Society on Toxinology 2005;45(3):293-301.
2005: Mulder Nicola J; Apweiler Rolf; Attwood Teresa K; Bairoch Amos; Bateman Alex; Binns David; Bradley Paul; Bork Peer; Bucher Phillip; Cerutti Lorenzo; Copley Richard; Courcelle Emmanuel; Das Ujjwal; Durbin Richard; Fleischmann Wolfgang; Gough Julian; Haft Daniel; Harte Nicola; Hulo Nicolas; Kahn Daniel; Kanapin Alexander; Krestyaninova Maria; Lonsdale David; Lopez Rodrigo; Letunic Ivica; Madera Martin; Maslen John; McDowall Jennifer; Mitchell Alex; Nikolskaya Anastasia N; Orchard Sandra; Pagni Marco; Ponting Chris P; Quevillon Emmanuel; Selengut Jeremy; Sigrist Christian J A; Silventoinen Ville; Studholme David J; Vaughan Robert; Wu Cathy H
InterPro, progress and status in 2005.
Nucleic acids research 2005;33(Database issue):D201-5.
2005: Bairoch Amos; Apweiler Rolf; Wu Cathy H; Barker Winona C; Boeckmann Brigitte; Ferro Serenella; Gasteiger Elisabeth; Huang Hongzhan; Lopez Rodrigo; Magrane Michele; Martin Maria J; Natale Darren A; O'Donovan Claire; Redaschi Nicole; Yeh Lai-Su L
The Universal Protein Resource (UniProt).
Nucleic acids research 2005;33(Database issue):D154-9.
2004: Schneider Michel; Tognolli Michael; Bairoch Amos
The Swiss-Prot protein knowledgebase and ExPASy: providing the plant community with high quality proteomic data and tools.
Plant physiology and biochemistry : PPB / Société française de physiologie végétale 2004;42(12):1013-21.
2004: Nakamura Kazuyuki; Aebersold Ruedi; Bairoch Amos; Dunn Michael; Celis Julio; Hanash Samir; Hochstrasser Denis; Humphrey-Smith Ian; James Peter; Klose Joachim; LaBaer Joshua; Langen Hanno; Mann Matthias; Parekh Raj; Patterson Scott; Pearce Christopher; Poepstorff Peter; Simpson Richard J; Tomlinson Ian; Tsugita Akira; Yates John
[From genome to proteome--aim of human proteomics]
Seikagaku. The Journal of Japanese Biochemical Society 2004;76(10):1271-4.
2004: Rose Keith; Bougueleret Lydie; Baussant Thierry; Böhm Günter; Botti Paolo; Colinge Jacques; Cusin Isabelle; Gaertner Hubert; Gleizes Anne; Heller Manfred; Jimenez Silvia; Johnson Andrew; Kussmann Martin; Menin Laure; Menzel Christoph; Ranno Frederic; Rodriguez-Tomé Patricia; Rogers John; Saudrais Cedric; Villain Matteo; Wetmore Diana; Bairoch Amos; Hochstrasser Denis
Industrial-scale proteomics: from liters of plasma to chemically synthesized proteins.
Proteomics 2004;4(7):2125-50.
2004: Farriol-Mathis Nathalie; Garavelli John S; Boeckmann Brigitte; Duvaud Séverine; Gasteiger Elisabeth; Gateau Alain; Veuthey Anne-Lise; Bairoch Amos
Annotation of post-translational modifications in the Swiss-Prot knowledge base.
Proteomics 2004;4(6):1537-50.
2004: Appel Ron D; Bairoch Amos
Post-translational modifications: a challenge for proteomics and bioinformatics.
Proteomics 2004;4(6):1525-6.
2004: Yip Yum L; Scheib Holger; Diemand Alexander V; Gattiker Alexandre; Famiglietti Livia M; Gasteiger Elisabeth; Bairoch Amos
The Swiss-Prot variant page and the ModSNP database: a resource for sequence and structure information on human protein variants.
Human mutation 2004;23(5):464-70.
2004: Bairoch Amos; Boeckmann Brigitte; Ferro Serenella; Gasteiger Elisabeth
Swiss-Prot: juggling between evolution and stability.
Briefings in bioinformatics 2004;5(1):39-55.
2004: Apweiler Rolf; Bairoch Amos; Wu Cathy H
Protein sequence databases.
Current opinion in chemical biology 2004;8(1):76-80.
2004: Hermjakob Henning; Montecchi-Palazzi Luisa; Lewington Chris; Mudali Sugath; Kerrien Samuel; Orchard Sandra; Vingron Martin; Roechert Bernd; Roepstorff Peter; Valencia Alfonso; Margalit Hanah; Armstrong John; Bairoch Amos; Cesareni Gianni; Sherman David; Apweiler Rolf
IntAct: an open source molecular interaction database.
Nucleic acids research 2004;32(Database issue):D452-5.
2004: Fleischmann Astrid; Darsow Michael; Degtyarenko Kirill; Fleischmann Wolfgang; Boyce Sinéad; Axelsen Kristian B; Bairoch Amos; Schomburg Dietmar; Tipton Keith F; Apweiler Rolf
IntEnz, the integrated relational enzyme database.
Nucleic acids research 2004;32(Database issue):D434-7.
2004: Hulo Nicolas; Sigrist Christian J A; Le Saux Virginie; Langendijk-Genevaux Petra S; Bordoli Lorenza; Gattiker Alexandre; De Castro Edouard; Bucher Philipp; Bairoch Amos
Recent improvements to the PROSITE database.
Nucleic acids research 2004;32(Database issue):D134-7.
2004: Apweiler Rolf; Bairoch Amos; Wu Cathy H; Barker Winona C; Boeckmann Brigitte; Ferro Serenella; Gasteiger Elisabeth; Huang Hongzhan; Lopez Rodrigo; Magrane Michele; Martin Maria J; Natale Darren A; O'Donovan Claire; Redaschi Nicole; Yeh Lai-Su L
UniProt: the Universal Protein knowledgebase.
Nucleic acids research 2004;32(Database issue):D115-9.
2003: Phan I Q H; Pilbout S F; Fleischmann W; Bairoch A
NEWT, a new taxonomy portal.
Nucleic acids research 2003;31(13):3822-3.
2003: Gasteiger Elisabeth; Gattiker Alexandre; Hoogland Christine; Ivanyi Ivan; Appel Ron D; Bairoch Amos
ExPASy: The proteomics server for in-depth protein knowledge and analysis.
Nucleic acids research 2003;31(13):3784-8.
2003: Peeters H; Debeer P; Bairoch A; Wilquet V; Huysmans C; Parthoens E; Fryns J P; Gewillig M; Nakamura Y; Niikawa N; Van de Ven W; Devriendt K
PA26 is a candidate gene for heterotaxia in humans: identification of a novel PA26-related gene family in human and mouse.
Human genetics 2003;112(5-6):573-80.
2003: Gattiker Alexandre; Michoud Karine; Rivoire Catherine; Auchincloss Andrea H; Coudert Elisabeth; Lima Tania; Kersey Paul; Pagni Marco; Sigrist Christian J A; Lachaize Corinne; Veuthey Anne Lise; Gasteiger Elisabeth; Bairoch Amos
Automated annotation of microbial proteomes in SWISS-PROT.
Computational biology and chemistry 2003;27(1):49-58.
2003: Boeckmann Brigitte; Bairoch Amos; Apweiler Rolf; Blatter Marie-Claude; Estreicher Anne; Gasteiger Elisabeth; Martin Maria J; Michoud Karine; O'Donovan Claire; Phan Isabelle; Pilbout Sandrine; Schneider Michel
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003.
Nucleic acids research 2003;31(1):365-70.
2003: Mulder Nicola J; Apweiler Rolf; Attwood Teresa K; Bairoch Amos; Barrell Daniel; Bateman Alex; Binns David; Biswas Margaret; Bradley Paul; Bork Peer; Bucher Phillip; Copley Richard R; Courcelle Emmanuel; Das Ujjwal; Durbin Richard; Falquet Laurent; Fleischmann Wolfgang; Griffiths-Jones Sam; Haft Daniel; Harte Nicola; Hulo Nicolas; Kahn Daniel; Kanapin Alexander; Krestyaninova Maria; Lopez Rodrigo; Letunic Ivica; Lonsdale David; Silventoinen Ville; Orchard Sandra E; Pagni Marco; Peyruc David; Ponting Chris P; Selengut Jeremy D; Servant Florence; Sigrist Christian J A; Vaughan Robert; Zdobnov Evgueni M
The InterPro Database, 2003 brings increased coverage and new features.
Nucleic acids research 2003;31(1):315-8.
2002: Gattiker Alexandre; Bienvenut Willy V; Bairoch Amos; Gasteiger Elisabeth
FindPept, a tool to identify unmatched masses in peptide mass fingerprinting protein identification.
Proteomics 2002;2(10):1435-44.
2002: Appel Ron D; Bairoch Amos
The application of bioinformatics to mass spectrometry.
Proteomics 2002;2(10):1363-4.
2002: O'Donovan Claire; Martin Maria Jesus; Gattiker Alexandre; Gasteiger Elisabeth; Bairoch Amos; Apweiler Rolf
High-quality protein knowledge resource: SWISS-PROT and TrEMBL.
Briefings in bioinformatics 2002;3(3):275-84.
2002: Sigrist Christian J A; Cerutti Lorenzo; Hulo Nicolas; Gattiker Alexandre; Falquet Laurent; Pagni Marco; Bairoch Amos; Bucher Philipp
PROSITE: a documented database using patterns and profiles as motif descriptors.
Briefings in bioinformatics 2002;3(3):265-74.
2002: Mulder Nicola J; Apweiler Rolf; Attwood Terri K; Bairoch Amos; Bateman Alex; Binns David; Biswas Margaret; Bradley Paul; Bork Peer; Bucher Phillip; Copley Richard; Courcelle Emmanuel; Durbin Richard; Falquet Laurent; Fleischmann Wolfgang; Gouzy Jerome; Griffith-Jones Sam; Haft Daniel; Hermjakob Henning; Hulo Nicolas; Kahn Daniel; Kanapin Alexander; Krestyaninova Maria; Lopez Rodrigo; Letunic Ivica; Orchard Sandra; Pagni Marco; Peyruc David; Ponting Chris P; Servant Florence; Sigrist Christian J A;
InterPro: an integrated documentation resource for protein families, domains and functional sites.
Briefings in bioinformatics 2002;3(3):225-35.
2002: Monigatti Flavio; Gasteiger Elisabeth; Bairoch Amos; Jung Eva
The Sulfinator: predicting tyrosine sulfation sites in protein sequences.
Bioinformatics (Oxford, England) 2002;18(5):769-70.
2002: Falquet Laurent; Pagni Marco; Bucher Philipp; Hulo Nicolas; Sigrist Christian J A; Hofmann Kay; Bairoch Amos
The PROSITE database, its status in 2002.
Nucleic acids research 2002;30(1):235-8.
2002: Gattiker Alexandre; Gasteiger Elisabeth; Bairoch Amos
ScanProsite: a reference implementation of a PROSITE scanning tool.
Applied bioinformatics 2002;1(2):107-8.
2001: Gasteiger E; Jung E; Bairoch A
SWISS-PROT: connecting biomolecular knowledge via a protein database.
Current issues in molecular biology 2001;3(3):47-55.
2001: O'Donovan C; Apweiler R; Bairoch A
The human proteomics initiative (HPI).
Trends in biotechnology 2001;19(5):178-81.
2001: Jung E; Veuthey A L; Gasteiger E; Bairoch A
Annotation of glycoproteins in the SWISS-PROT database.
Proteomics 2001;1(2):262-8.
2001: Apweiler R; Attwood T K; Bairoch A; Bateman A; Birney E; Biswas M; Bucher P; Cerutti L; Corpet F; Croning M D; Durbin R; Falquet L; Fleischmann W; Gouzy J; Hermjakob H; Hulo N; Jonassen I; Kahn D; Kanapin A; Karavidopoulou Y; Lopez R; Marx B; Mulder N J; Oinn T M; Pagni M; Servant F; Sigrist C J; Zdobnov E M
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
Nucleic acids research 2001;29(1):37-40.
2000: Apweiler R; Attwood T K; Bairoch A; Bateman A; Birney E; Biswas M; Bucher P; Cerutti L; Corpet F; Croning M D; Durbin R; Falquet L; Fleischmann W; Gouzy J; Hermjakob H; Hulo N; Jonassen I; Kahn D; Kanapin A; Karavidopoulou Y; Lopez R; Marx B; Mulder N J; Oinn T M; Pagni M; Servant F; Sigrist C J; Zdobnov E M;
InterPro--an integrated documentation resource for protein families, domains and functional sites.
Bioinformatics (Oxford, England) 2000;16(12):1145-50.
2000: Linder P; Gasteiger E; Bairoch A
A comprehensive web resource on RNA helicases from the baker's yeast Saccharomyces cerevisiae.
Yeast (Chichester, England) 2000;16(6):507-9.
2000: Bairoch A
Serendipity in bioinformatics, the tribulations of a Swiss bioinformatician through exciting times!
Bioinformatics (Oxford, England) 2000;16(1):48-64.
2000: Bairoch A
The ENZYME database in 2000.
Nucleic acids research 2000;28(1):304-5.
2000: Hoogland C; Sanchez J C; Tonella L; Binz P A; Bairoch A; Hochstrasser D F; Appel R D
The 1999 SWISS-2DPAGE database update.
Nucleic acids research 2000;28(1):286-8.
2000: Bairoch A; Apweiler R
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.
Nucleic acids research 2000;28(1):45-8.
1999: Junker V L; Apweiler R; Bairoch A
Representation of functional information in the SWISS-PROT data bank.
Bioinformatics (Oxford, England) 1999;15(12):1066-7.
1999: Gras R; Müller M; Gasteiger E; Gay S; Binz P A; Bienvenut W; Hoogland C; Sanchez J C; Bairoch A; Hochstrasser D F; Appel R D
Improving protein identification from peptide mass fingerprinting through a parameterized multi-level scoring algorithm and an optimized peak detection.
Electrophoresis 1999;20(18):3535-50.
1999: Chen H; Rossier C; Morris M A; Scott H S; Gos A; Bairoch A; Antonarakis S E
A testis-specific gene, TPTE, encodes a putative transmembrane tyrosine phosphatase and maps to the pericentromeric region of human chromosomes 21 and 13, and to chromosomes 15, 22, and Y.
Human genetics 1999;105(5):399-409.
1999: Binz P A; Müller M; Walther D; Bienvenut W V; Gras R; Hoogland C; Bouchet G; Gasteiger E; Fabbretti R; Gay S; Palagi P; Wilkins M R; Rouge V; Tonella L; Paesano S; Rossellat G; Karmime A; Bairoch A; Sanchez J C; Appel R D; Hochstrasser D F
A molecular scanner to automate proteomic research and to display proteome images.
Analytical chemistry 1999;71(21):4981-8.
1999: Vasiliou V; Bairoch A; Tipton K F; Nebert D W
Eukaryotic aldehyde dehydrogenase (ALDH) genes: human polymorphisms, and recommended nomenclature based on divergent evolution and chromosomal mapping.
Pharmacogenetics 1999;9(4):421-34.
1999: Wilkins M R; Gasteiger E; Gooley A A; Herbert B R; Molloy M P; Binz P A; Ou K; Sanchez J C; Bairoch A; Williams K L; Hochstrasser D F
High-throughput mass spectrometric discovery of protein post-translational modifications.
Journal of molecular biology 1999;289(3):645-57.
1999: Bairoch A
The ENZYME data bank in 1999.
Nucleic acids research 1999;27(1):310-1.
1999: Hoogland C; Sanchez J C; Tonella L; Bairoch A; Hochstrasser D F; Appel R D
The SWISS-2DPAGE database: what has changed during the last year.
Nucleic acids research 1999;27(1):289-91.
1999: Hofmann K; Bucher P; Falquet L; Bairoch A
The PROSITE database, its status in 1999.
Nucleic acids research 1999;27(1):215-9.
1999: Bairoch A; Apweiler R
The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1999.
Nucleic acids research 1999;27(1):49-54.
1999: Wilkins M R; Gasteiger E; Bairoch A; Sanchez J C; Williams K L; Appel R D; Hochstrasser D F
Protein identification and analysis tools in the ExPASy server.
Methods in molecular biology (Clifton, N.J.) 1999;112():531-52.
1999: Appel R D; Hoogland C; Bairoch A; Hochstrasser D F
Constructing a 2-D database for the World Wide Web.
Methods in molecular biology (Clifton, N.J.) 1999;112():411-6.
1999: Appel R D; Bairoch A; Hochstrasser D F
2-D databases on the World Wide Web.
Methods in molecular biology (Clifton, N.J.) 1999;112():383-91.
1998: Wilkins M R; Gasteiger E; Wheeler C H; Lindskog I; Sanchez J C; Bairoch A; Appel R D; Dunn M J; Hochstrasser D F
Multiple parameter cross-species protein identification using MultiIdent--a world-wide web accessible tool.
Electrophoresis 1998;19(18):3199-206.
1998: Galperin M Y; Bairoch A; Koonin E V
A superfamily of metalloenzymes unifies phosphopentomutase and cofactor-independent phosphoglycerate mutase with alkaline phosphatases and sulfatases.
Protein science : a publication of the Protein Society 1998;7(8):1829-35.
1998: Tonella L; Walsh B J; Sanchez J C; Ou K; Wilkins M R; Tyler M; Frutiger S; Gooley A A; Pescaru I; Appel R D; Yan J X; Bairoch A; Hoogland C; Morch F S; Hughes G J; Williams K L; Hochstrasser D F
'98 Escherichia coli SWISS-2DPAGE database update.
Electrophoresis 1998;19(11):1960-71.
1998: Wilkins M R; Gasteiger E; Sanchez J C; Bairoch A; Hochstrasser D F
Two-dimensional gel electrophoresis for proteome projects: the effects of protein hydrophobicity and copy number.
Electrophoresis 1998;19(8-9):1501-5.
1998: Doerks T; Bairoch A; Bork P
Protein annotation: detective work for function prediction.
Trends in genetics : TIG 1998;14(6):248-50.
1998: Wilkins M R; Gasteiger E; Tonella L; Ou K; Tyler M; Sanchez J C; Gooley A A; Walsh B J; Bairoch A; Appel R D; Williams K L; Hochstrasser D F
Protein identification with N and C-terminal sequence tags in proteome projects.
Journal of molecular biology 1998;278(3):599-608.
1998: Rudd K E; Humphery-Smith I; Wasinger V C; Bairoch A
Low molecular weight proteins: a challenge for post-genomic research.
Electrophoresis 1998;19(4):536-44.
1998: Duret L; Guex N; Peitsch M C; Bairoch A
New insulin-like proteins with atypical disulfide bond pattern characterized in Caenorhabditis elegans by comparative sequence analysis and homology modeling.
Genome research 1998;8(4):348-53.
1998: Hoogland C; Sanchez J C; Tonella L; Bairoch A; Hochstrasser D F; Appel R D
Current status of the SWISS-2DPAGE database.
Nucleic acids research 1998;26(1):332-3.
1998: Horn F; Weare J; Beukers M W; Hörsch S; Bairoch A; Chen W; Edvardsen O; Campagne F; Vriend G
GPCRDB: an information system for G protein-coupled receptors.
Nucleic acids research 1998;26(1):275-9.
1998: Bairoch A; Apweiler R
The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998.
Nucleic acids research 1998;26(1):38-42.
1997: Gallegos M T; Schleif R; Bairoch A; Hofmann K; Ramos J L
Arac/XylS family of transcriptional regulators.
Microbiology and molecular biology reviews : MMBR 1997;61(4):393-410.
1997: Green E A; Pietrokovski S; Henikoff S; Bork P; Attwood T; Hood L; Bairoch A
Genome maps 8. Building gene families. Wall chart.
Science (New York, N.Y.) 1997;278(5338):615-30.
1997: Mackenzie P I; Owens I S; Burchell B; Bock K W; Bairoch A; Bélanger A; Fournel-Gigleux S; Green M; Hum D W; Iyanagi T; Lancet D; Louisot P; Magdalou J; Chowdhury J R; Ritter J K; Schachter H; Tephly T R; Tipton K F; Nebert D W
The UDP glycosyltransferase gene superfamily: recommended nomenclature update based on evolutionary divergence.
Pharmacogenetics 1997;7(4):255-69.
1997: Bairoch A; Apweiler R
The SWISS-PROT protein sequence database: its relevance to human molecular medical research.
Journal of molecular medicine (Berlin, Germany) 1997;75(5):312-6.
1997: Freiberg C; Fellay R; Bairoch A; Broughton W J; Rosenthal A; Perret X
Molecular basis of symbiosis between Rhizobium and legumes.
Nature 1997;387(6631):394-401.
1997: Wilkins M R; Lindskog I; Gasteiger E; Bairoch A; Sanchez J C; Hochstrasser D F; Appel R D
Detailed peptide characterization using PEPTIDEMASS--a World-Wide-Web-accessible tool.
Electrophoresis 1997;18(3-4):403-8.
1997: Bairoch A; Bucher P; Hofmann K
The PROSITE database, its status in 1997.
Nucleic acids research 1997;25(1):217-21.
1997: Bairoch A; Apweiler R
The SWISS-PROT protein sequence data bank and its supplement TrEMBL.
Nucleic acids research 1997;25(1):31-6.
1997: Apweiler R; Gateau A; Contrino S; Martin M J; Junker V; O'Donovan C; Lang F; Mitaritonna N; Kappus S; Bairoch A
Protein sequence annotation in the genome era: the annotation concept of SWISS-PROT+TREMBL.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1997;5():33-43.
1996: Wilkins M R; Hochstrasser D F; Sanchez J C; Bairoch A; Appel R D
Integrating two-dimensional gel databases using the Melanie II software.
Trends in biochemical sciences 1996;21(12):496-7.
1996: Bork P; Bairoch A
Go hunting in sequence databases but watch out for the traps.
Trends in genetics : TIG 1996;12(10):425-7.
1996: Henrissat B; Bairoch A
Updating the sequence-based classification of glycosyl hydrolases.
The Biochemical journal 1996;316 ( Pt 2)():695-6.
1996: Sanchez J C; Golaz O; Frutiger S; Schaller D; Appel R D; Bairoch A; Hughes G J; Hochstrasser D F
The yeast SWISS-2DPAGE database.
Electrophoresis 1996;17(3):556-65.
1996: Pasquali C; Frutiger S; Wilkins M R; Hughes G J; Appel R D; Bairoch A; Schaller D; Sanchez J C; Hochstrasser D F
Two-dimensional gel electrophoresis of Escherichia coli homogenates: the Escherichia coli SWISS-2DPAGE database.
Electrophoresis 1996;17(3):547-55.
1996: Appel R D; Bairoch A; Sanchez J C; Vargas J R; Golaz O; Pasquali C; Hochstrasser D F
Federated two-dimensional electrophoresis database: a simple means of publishing two-dimensional electrophoresis data.
Electrophoresis 1996;17(3):540-6.
1996: Dölz R; Mossé M O; Slonimski P P; Bairoch A; Linder P
LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces.
Nucleic acids research 1996;24(1):50-2.
1996: Bairoch A
The ENZYME data bank in 1995.
Nucleic acids research 1996;24(1):221-2.
1996: Bairoch A; Apweiler R
The SWISS-PROT protein sequence data bank and its new supplement TREMBL.
Nucleic acids research 1996;24(1):21-5.
1996: Bairoch A; Bucher P; Hofmann K
The PROSITE database, its status in 1995.
Nucleic acids research 1996;24(1):189-96.
1996: Appel R D; Sanchez J C; Bairoch A; Golaz O; Ravier F; Pasquali C; Hughes G J; Hochstrasser D F
The SWISS-2DPAGE database of two-dimensional polyacrylamide gel electrophoresis, its status in 1995.
Nucleic acids research 1996;24(1):180-1.
1995: Sanchez J C; Appel R D; Golaz O; Pasquali C; Ravier F; Bairoch A; Hochstrasser D F
Inside SWISS-2DPAGE database.
Electrophoresis 1995;16(7):1131-51.
1995: Hochstrasser D F; Appel R D; Golaz O; Pasquali C; Sanchez J C; Bairoch A
Sharing of worldwide spread knowledge using hypermedia facilities & fast communication protocols (Mosaic and World Wide Web): the example of ExPASy.
Methods of information in medicine 1995;34(1-2):75-8.
1994: Bairoch A
The ENZYME data bank.
Nucleic acids research 1994;22(17):3626-7.
1994: Bairoch A; Bucher P
PROSITE: recent developments.
Nucleic acids research 1994;22(17):3583-9.
1994: Appel R D; Sanchez J C; Bairoch A; Golaz O; Ravier F; Pasquali C; Hughes G J; Hochstrasser D F
The SWISS-2DPAGE database of two-dimensional polyacrylamide gel electrophoresis.
Nucleic acids research 1994;22(17):3581-2.
1994: Bairoch A; Boeckmann B
The SWISS-PROT protein sequence data bank: current status.
Nucleic acids research 1994;22(17):3578-80.
1994: Dölz R; Mossé M O; Slonimski P P; Bairoch A; Linder P
LISTA, LISTA-HOP and LISTA-HON: a comprehensive compilation of protein encoding sequences and its associated homology databases from the yeast Saccharomyces.
Nucleic acids research 1994;22(17):3459-61.
1994: Appel R D; Bairoch A; Hochstrasser D F
A new generation of information retrieval tools for biologists: the example of the ExPASy WWW server.
Trends in biochemical sciences 1994;19(6):258-60.
1994: Reizer J; Buskirk S; Bairoch A; Reizer A; Saier M H
A novel zinc-binding motif found in two ubiquitous deaminase families.
Protein science : a publication of the Protein Society 1994;3(5):853-6.
1994: Bucher P; Bairoch A
A generalized profile syntax for biomolecular sequence motifs and its function in automatic sequence interpretation.
Proceedings / ... International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology 1994;2():53-61.
1993: Appel R D; Sanchez J C; Bairoch A; Golaz O; Miu M; Vargas J R; Hochstrasser D F
SWISS-2DPAGE: a database of two-dimensional gel electrophoresis images.
Electrophoresis 1993;14(11):1232-8.
1993: Golaz O; Hughes G J; Frutiger S; Paquet N; Bairoch A; Pasquali C; Sanchez J C; Tissot J D; Appel R D; Walzer C
Plasma and red blood cell protein maps: update 1993.
Electrophoresis 1993;14(11):1223-31.
1993: Hughes G J; Frutiger S; Paquet N; Pasquali C; Sanchez J C; Tissot J D; Bairoch A; Appel R D; Hochstrasser D F
Human liver protein map: update 1993.
Electrophoresis 1993;14(11):1216-22.
1993: Henrissat B; Bairoch A
New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.
The Biochemical journal 1993;293 ( Pt 3)():781-8.
1993: Bairoch A
The ENZYME data bank.
Nucleic acids research 1993;21(13):3155-6.
1993: Bairoch A
The PROSITE dictionary of sites and patterns in proteins, its current status.
Nucleic acids research 1993;21(13):3097-103.
1993: Bairoch A; Boeckmann B
The SWISS-PROT protein sequence data bank, recent developments.
Nucleic acids research 1993;21(13):3093-6.
1993: Reizer J; Reizer A; Bairoch A; Saier M H
A diverse transketolase family that includes the RecP protein of Streptococcus pneumoniae, a protein implicated in genetic recombination.
Research in microbiology 1993;144(5):341-7.
1993: Bairoch A
A possible mechanism for metal-ion induced DNA-protein dissociation in a family of prokaryotic transcriptional regulators.
Nucleic acids research 1993;21(10):2515.
1993: Scherly D; Nouspikel T; Corlet J; Ucla C; Bairoch A; Clarkson S G
Complementation of the DNA repair defect in xeroderma pigmentosum group G cells by a human cDNA related to yeast RAD2.
Nature 1993;363(6425):182-5.
1992: Hochstrasser D F; Frutiger S; Paquet N; Bairoch A; Ravier F; Pasquali C; Sanchez J C; Tissot J D; Bjellqvist B; Vargas R
Human liver protein map: a reference database established by microsequencing and gel comparison.
Electrophoresis 1992;13(12):992-1001.
1992: Breviario F; d'Aniello E M; Golay J; Peri G; Bottazzi B; Bairoch A; Saccone S; Marzella R; Predazzi V; Rocchi M
Interleukin-1-inducible genes in endothelial cells. Cloning of a new gene related to C-reactive protein and serum amyloid P component.
The Journal of biological chemistry 1992;267(31):22190-7.
1992: Boguski M S; Bairoch A; Attwood T K; Michaels G S
Proto-vav and gene expression.
Nature 1992;358(6382):113.
1992: Bairoch A; Boeckmann B
The SWISS-PROT protein sequence data bank.
Nucleic acids research 1992;20 Suppl():2019-22.
1992: Bairoch A
PROSITE: a dictionary of sites and patterns in proteins.
Nucleic acids research 1992;20 Suppl():2013-8.
1992: Neidle E; Hartnett C; Ornston L N; Bairoch A; Rekik M; Harayama S
cis-diol dehydrogenases encoded by the TOL pWW0 plasmid xylL gene and the Acinetobacter calcoaceticus chromosomal benD gene are members of the short-chain alcohol dehydrogenase superfamily.
European journal of biochemistry / FEBS 1992;204(1):113-20.
1991: Harayama S; Rekik M; Bairoch A; Neidle E L; Ornston L N
Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWW0 plasmid xylXYZ, genes encoding benzoate dioxygenases.
Journal of bacteriology 1991;173(23):7540-8.
1991: Neidle E L; Hartnett C; Ornston L N; Bairoch A; Rekik M; Harayama S
Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases.
Journal of bacteriology 1991;173(17):5385-95.
1991: Bairoch A
SEQANALREF: a sequence analysis bibliographic reference databank.
Computer applications in the biosciences : CABIOS 1991;7(2):268.
1991: Bairoch A; Boeckmann B
The SWISS-PROT protein sequence data bank.
Nucleic acids research 1991;19 Suppl():2247-9.
1991: Bairoch A
PROSITE: a dictionary of sites and patterns in proteins.
Nucleic acids research 1991;19 Suppl():2241-5.
1990: Bairoch A; Cox J A
EF-hand motifs in inositol phospholipid-specific phospholipase C.
FEBS letters 1990;269(2):454-6.
1990: Chauvaux S; Beguin P; Aubert J P; Bhat K M; Gow L A; Wood T M; Bairoch A
Calcium-binding affinity and calcium-enhanced activity of Clostridium thermocellum endoglucanase D.
The Biochemical journal 1990;265(1):261-5.
1989: Lesk A M; Boswell D R; Lesk V I; Lesk V E; Bairoch A
A cross-reference table between the Protein Data Bank of macromolecular structures and the National Biomedical Research Foundation-Protein Identification Resource amino acid sequence data bank.
Protein sequences & data analysis 1989;2(4):295-308.
1989: Jongeneel C V; Bouvier J; Bairoch A
A unique signature identifies a family of zinc-dependent metallopeptidases.
FEBS letters 1989;242(2):211-4.
1988: Moore J; Engelberg A; Bairoch A
Using PC/GENE for protein and nucleic acid analysis.
BioTechniques 1988;6(6):566-72.
1988: Cox J A; Bairoch A
Sequence similarities in calcium-binding proteins.
Nature 1988;331(6156):491.
1988: Bairoch A; Claverie J M
Sequence patterns in protein kinases.
Nature 1988;331(6151):22.
1987: Harayama S; Rekik M; Wasserfallen A; Bairoch A
Evolutionary relationships between catabolic pathways for aromatics: conservation of gene order and nucleotide sequences of catechol oxidation genes of pWW0 and NAH7 plasmids.
Molecular & general genetics : MGG 1987;210(2):241-7.
1987: Mermod N; Ramos J L; Bairoch A; Timmis K N
The xylS gene positive regulator of TOL plasmid pWWO: identification, sequence analysis and overproduction leading to constitutive expression of meta cleavage operon.
Molecular & general genetics : MGG 1987;207(2-3):349-54.
1982: Bairoch A
Evidence for the existence of a mutated enkephalin sequence in preproenkephalin.
FEBS letters 1982;145(1):121-2.
1982: Bairoch A
Suggestion to research groups working on protein and peptide sequence.
The Biochemical journal 1982;203(2):527-8.

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