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Margreet Bakker

Research Profile

Living Beings

HIV-1

Disorders

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Netherlands

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TOP 3
Michel de Vries; Martin Deijs; Suzanne Jurriaans; Sylvie M Koekkoek; Angela C Luyf; Richard Molenkamp; Silvia D Olabarriaga; Bas B Oude Munnink; Margreet Bakker; Marta Canuti; Antoine H C van Kampen; Barbera D C van Schaik; Lia van der Hoek
Performance of VIDISCA-454 in feces-suspensions and serum.
Maaike B van Werkhoven; Elly Baan; Margreet Bakker; Suzanne Jurriaans; William A Paxton; Georgios Pollakis
Transmission of two distinct HIV type 1 strains to an individual that were harbored for many years by another.
Martijn J Stax; Michael W T Tanck; Angélique B van 't Wout; Margreet Bakker; Neeltje A Kootstra; Georgios Pollakis; William A Paxton
HIV-1 disease progression is associated with bile-salt stimulated lipase (BSSL) gene polymorphism.

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All Publications

2012: Michel de Vries; Martin Deijs; Suzanne Jurriaans; Sylvie M Koekkoek; Angela C Luyf; Richard Molenkamp; Silvia D Olabarriaga; Bas B Oude Munnink; Margreet Bakker; Marta Canuti; Antoine H C van Kampen; Barbera D C van Schaik; Lia van der Hoek
Performance of VIDISCA-454 in feces-suspensions and serum.
Viruses 2012;4(8):1328-34.
2012: Maaike B van Werkhoven; Elly Baan; Margreet Bakker; Suzanne Jurriaans; William A Paxton; Georgios Pollakis
Transmission of two distinct HIV type 1 strains to an individual that were harbored for many years by another.
AIDS research and human retroviruses 2012;28(2):225-7.
2012: Martijn J Stax; Michael W T Tanck; Angélique B van 't Wout; Margreet Bakker; Neeltje A Kootstra; Georgios Pollakis; William A Paxton
HIV-1 disease progression is associated with bile-salt stimulated lipase (BSSL) gene polymorphism.
PloS one 2012;7(3):e32534.
2011: Mireille Centlivre; Nicolas Legrand; Radjin Steingrover; Renee van der Sluis; Marlous L Grijsen; Margreet Bakker; Suzanne Jurriaans; Ben Berkhout; William A Paxton; Jan M Prins; Georgios Pollakis
Altered dynamics and differential infection profiles of lymphoid and myeloid cell subsets during acute and chronic HIV-1 infection.
Journal of leukocyte biology 2011;89(5):785-95.
2010: Workenesh Ayele; Yared Mekonnen; Tsehaynesh Messele; Yohannes Menigstu; Aster Tsegaye; Margreet Bakker; Ben Berkhout; Wendelien Dorigo-Zetsma; Dawit Wolday; Jaap Goudsmit; Roel Coutinho; Michel P De Baar; William A Paxton; Georgios Pollakis
Differences in HIV type 1 RNA plasma load profile of closely related cocirculating Ethiopian subtype C strains: C and C'.
AIDS research and human retroviruses 2010;26(7):805-13.
2010: R van Houdt; Sylvia M Bruisten; Ronald B Geskus; Margreet Bakker; K C Wolthers; Maria Prins; Roel A Coutinho
Ongoing transmission of a single hepatitis B virus strain among men having sex with men in Amsterdam.
Journal of viral hepatitis 2010;17(2):108-14.
2010: Marion Cornelissen; Fokla Zorgdrager; Petra Blom; Suzanne Jurriaans; Sjoerd Repping; Elisabeth van Leeuwen; Margreet Bakker; Ben Berkhout; Antoinette C van der Kuyl
Lack of detection of XMRV in seminal plasma from HIV-1 infected men in The Netherlands.
PloS one 2010;5(8):e12040.
2009: Marion Cornelissen; Frederik M Hoogland; Nicole Back; Suzanne Jurriaans; Fokla Zorgdrager; Margreet Bakker; Kees Brinkman; Maria Prins; Antoinette C van der Kuyl
Multiple transmissions of a stable human leucocyte antigen-B27 cytotoxic T-cell-escape strain of HIV-1 in The Netherlands.
AIDS (London, England) 2009;23(12):1495-500.
2009: Antoinette C van der Kuyl; Fokla Zorgdrager; Suzanne Jurriaans; Nicole Back; Jan M Prins; Kees Brinkman; Arne van Eeden; Margreet Bakker; Marion Cornelissen
Incidence of human immunodeficiency virus type 1 dual infections in Amsterdam, The Netherlands, during 2003-2007.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America 2009;48(7):973-8.
2009: Alexander O. Pasternak; Suzanne Jurriaans; Margreet Bakker; Jan M Prins; Ben Berkhout; Vladimir V Lukashov
Cellular levels of HIV unspliced RNA from patients on combination antiretroviral therapy with undetectable plasma viremia predict the therapy outcome.
PloS one 2009;4(12):e8490.
2007: Youssef Gali; Ben Berkhout; Guido Vanham; Margreet Bakker; Nicole Back; Kevin Ariën
Survey of the temporal changes in HIV-1 replicative fitness in the Amsterdam Cohort.
Virology 2007;364(1):140-6.
2007: Marion Cornelissen; Suzanne Jurriaans; Karolina Kozaczynska; Jan M Prins; Raditijo A Hamidjaja; Fokla Zorgdrager; Margreet Bakker; Nicole Back; Antoinette C van der Kuyl
Routine HIV-1 genotyping as a tool to identify dual infections.
AIDS (London, England) 2007;21(7):807-11.
2007: Lia van der Hoek; Georgios Pollakis; Vladimir V Lukashov; Maarten F Jebbink; Rienk E Jeeninga; Margreet Bakker; Nicole Dukers; Suzanne Jurriaans; William A Paxton; Nicole Back; Ben Berkhout
Characterization of an HIV-1 group M variant that is distinct from the known subtypes.
AIDS research and human retroviruses 2007;23(3):466-70.
2007: charlotte van den berg; Colette Smit; Margreet Bakker; Ronald B Geskus; Ben Berkhout; Suzanne Jurriaans; Roel A Coutinho; Katja C Wolthers; Maria Prins
Major decline of hepatitis C virus incidence rate over two decades in a cohort of drug users.
European journal of epidemiology 2007;22(3):183-93.
2006: Ben Berkhout; Nicole Back; Anthony de Ronde; Suzanne Jurriaans; Margreet Bakker; Neil T Parkin; Lia van der Hoek
Identification of alternative amino acid substitutions in drug-resistant variants of the HIV-1 reverse transcriptase.
AIDS (London, England) 2006;20(11):1515-20.
2006: Marion Cornelissen; Suzanne Jurriaans; Jan M Prins; Margreet Bakker; Antoinette C van der Kuyl
Absence of seroreversion in 80 HAART-treated HIV-1 seropositive patients with at least five-years undetectable plasma HIV-1 viral load.
AIDS research and therapy 2006;3():3.
2005: Mark J Geels; Sheri A Dubey; Kiersten Anderson; Elly Baan; Margreet Bakker; Georgios Pollakis; William A Paxton; John W Shiver; Jaap Goudsmit
Broad cross-clade T-cell responses to gag in individuals infected with human immunodeficiency virus type 1 non-B clades (A to G): importance of HLA anchor residue conservation.
Journal of virology 2005;79(17):11247-58.
2005: Miriam Casula; Irene Bosboom-Dobbelaer; Karlijn Smolders; Sigrid Otto; Margreet Bakker; Michel P De Baar; Peter Reiss; Anthony de Ronde
Infection with HIV-1 induces a decrease in mtDNA.
The Journal of infectious diseases 2005;191(9):1468-71.
2005: Lia van der Hoek; Nicole Back; Maarten F Jebbink; Anthony de Ronde; Margreet Bakker; Suzanne Jurriaans; Peter Reiss; Neil Parkin; Ben Berkhout
Increased multinucleoside drug resistance and decreased replicative capacity of a human immunodeficiency virus type 1 variant with an 8-amino-Acid insert in the reverse transcriptase.
Journal of virology 2005;79(6):3536-43.
2004: Georgios Pollakis; Almaz Abebe; Aletta Kliphuis; Moustapha I M Chalaby; Margreet Bakker; Yohannes Menigstu; Mieke C Brouwer; Jaap Goudsmit; Hanneke Schuitemaker; William A Paxton
Phenotypic and genotypic comparisons of CCR5- and CXCR4-tropic human immunodeficiency virus type 1 biological clones isolated from subtype C-infected individuals.
Journal of virology 2004;78(6):2841-52.
2002: Neil Renwick; Gerrit Jan Weverling; Joke Brouwer; Margreet Bakker; Thomas F Schulz; Jaap Goudsmit
Vascular endothelial growth factor levels in serum do not increase following HIV type 1 and HHV8 seroconversion and lack correlation with AIDS-related Kaposi's sarcoma.
AIDS research and human retroviruses 2002;18(10):695-8.
2002: Ben Berkhout; Andrei Grigoriev; Margreet Bakker; Vladimir V Lukashov
Codon and amino acid usage in retroviral genomes is consistent with virus-specific nucleotide pressure.
AIDS research and human retroviruses 2002;18(2):133-41.
2001: Neil Renwick; Gerrit Jan Weverling; T Halaby; Peter Portegies; Margreet Bakker; Thomas F Schulz; Jaap Goudsmit
Kaposi's sarcoma and human herpesvirus 8 infection do not protect HIV-1 infected homosexual men from AIDS dementia complex.
AIDS (London, England) 2001;15(16):2165-9.
2001: Daan W Notermans; JJ de Jong; Jaap Goudsmit; Margreet Bakker; Marijke Th L Roos; L Nijholt; J Cremers; J A Hellings; Sven A Danner; Anthony de Ronde
Potent antiretroviral therapy initiates normalization of hypergammaglobulinemia and a decline in HIV type 1-specific antibody responses.
AIDS research and human retroviruses 2001;17(11):1003-8.
2001: Michel P De Baar; Eveline C Timmermans; Margreet Bakker; Esther R de Rooij; Bob van Gemen; Jaap Goudsmit
One-tube real-time isothermal amplification assay to identify and distinguish human immunodeficiency virus type 1 subtypes A, B, and C and circulating recombinant forms AE and AG.
Journal of clinical microbiology 2001;39(5):1895-902.
2001: Michel P De Baar; MW van Dooren; Esther R de Rooij; Margreet Bakker; Bob van Gemen; Jaap Goudsmit; Anthony de Ronde
Single rapid real-time monitored isothermal RNA amplification assay for quantification of human immunodeficiency virus type 1 isolates from groups M, N, and O.
Journal of clinical microbiology 2001;39(4):1378-84.
2000: Jaap Goudsmit; Neil Renwick; Nicole Dukers; Roel A Coutinho; Siem H Heisterkamp; Margreet Bakker; Thomas F Schulz; Marion Cornelissen; Gerrit Jan Weverling
Human herpesvirus 8 infections in the Amsterdam Cohort Studies (1984-1997): analysis of seroconversions to ORF65 and ORF73.
Proceedings of the National Academy of Sciences of the United States of America 2000;97(9):4838-43.
1998: Marijke Th L Roos; Maria Prins; M Koot; Frank de Wolf; Margreet Bakker; Roel A Coutinho; Frank Miedema; P T A Schellekens
Low T-cell responses to CD3 plus CD28 monoclonal antibodies are predictive of development of AIDS.
AIDS (London, England) 1998;12(14):1745-51.
1997: Frank de Wolf; Ingrid J B Spijkerman; P T A Schellekens; Miranda W Langendam; CL Kuiken; Margreet Bakker; M Roos; Roel A Coutinho; Frank Miedema; Jaap Goudsmit
AIDS prognosis based on HIV-1 RNA, CD4+ T-cell count and function: markers with reciprocal predictive value over time after seroconversion.
AIDS (London, England) 1997;11(15):1799-806.
1997: Ana Maria de Roda Husman; M Koot; Marion Cornelissen; IP Keet; Mieke C Brouwer; SM Broersen; Margreet Bakker; Marijke Th L Roos; Maria Prins; Frank de Wolf; Roel A Coutinho; Frank Miedema; Jaap Goudsmit; Hanneke Schuitemaker
Association between CCR5 genotype and the clinical course of HIV-1 infection.
Annals of internal medicine 1997;127(10):882-90.
1997: Angelica B Van't Wout; LJ Ran; Menno D De Jong; Margreet Bakker; Remko van Leeuwen; Daan W Notermans; A E Loeliger; Frank de Wolf; Sven A Danner; Peter Reiss; Charles A B Boucher; Joep M A Lange; Hanneke Schuitemaker
Selective inhibition of syncytium-inducing and nonsyncytium-inducing HIV-1 variants in individuals receiving didanosine or zidovudine, respectively.
The Journal of clinical investigation 1997;100(9):2325-32.
1997: H Blaak; Frank de Wolf; Angélique B van 't Wout; Nadine Pakker; Margreet Bakker; Jaap Goudsmit; Hanneke Schuitemaker
Temporal relationship between human immunodeficiency virus type 1 RNA levels in serum and cellular infectious load in peripheral blood.
The Journal of infectious diseases 1997;176(5):1383-7.
1995: E Hogervorst; J de Jong; Albert van Wijk; Margreet Bakker; M Valk; P Nara; Jaap Goudsmit
Insertion of primary syncytium-inducing (SI) and non-SI envelope V3 loops in human immunodeficiency virus type 1 (HIV-1) LAI reduces neutralization sensitivity to autologous, but not heterologous, HIV-1 antibodies.
Journal of virology 1995;69(10):6342-51.
1993: Peter Portegies; M H Godfried; R Q Hintzen; J Stam; Tom van der Poll; Margreet Bakker; Sander J H van Deventer; René A W van Lier; Jaap Goudsmit
Low levels of specific T cell activation marker CD27 accompanied by elevated levels of markers for non-specific immune activation in the cerebrospinal fluid of patients with AIDS dementia complex.
Journal of neuroimmunology 1993;48(2):241-7.
1993: G Zwart; T F Wolfs; R Bookelman; S Hartman; Margreet Bakker; Charles A B Boucher; CL Kuiken; Jaap Goudsmit
Greater diversity of the HIV-1 V3 neutralization domain in Tanzania compared with The Netherlands: serological and genetic analysis.
AIDS (London, England) 1993;7(4):467-74.
1992: Sylvia M Bruisten; M H Koppelman; J T Dekker; Margreet Bakker; R E de Goede; Marijke Th L Roos; Frank de Wolf; Roel A Coutinho; Jaap Goudsmit; H G Huisman
Concordance of human immunodeficiency virus detection by polymerase chain reaction and by serologic assays in a Dutch cohort of seronegative homosexual men.
The Journal of infectious diseases 1992;166(3):620-2.
1992: T F Wolfs; G Zwart; Margreet Bakker; Jaap Goudsmit
HIV-1 genomic RNA diversification following sexual and parenteral virus transmission.
Virology 1992;189(1):103-10.
1991: T F Wolfs; G Zwart; Margreet Bakker; M Valk; CL Kuiken; Jaap Goudsmit
Naturally occurring mutations within HIV-1 V3 genomic RNA lead to antigenic variation dependent on a single amino acid substitution.
Virology 1991;185(1):195-205.
1991: Jan W Mulder; P Krijnen; Roel A Coutinho; Margreet Bakker; Jaap Goudsmit; Joep M A Lange
Serum beta 2-microglobulin levels in asymptomatic HIV-1-infected subjects during long-term zidovudine treatment.
Genitourinary medicine 1991;67(3):188-93.
1991: G Zwart; H Langedijk; Lia van der Hoek; JJ de Jong; T F Wolfs; C Ramautarsing; Margreet Bakker; Anthony de Ronde; Jaap Goudsmit
Immunodominance and antigenic variation of the principal neutralization domain of HIV-1.
Virology 1991;181(2):481-9.
1990: Jan W Mulder; Joep M A Lange; Frank de Wolf; J T Houweling; Margreet Bakker; Roel A Coutinho; Jaap Goudsmit
Serum p24 antigen levels in untreated and zidovudine-treated HIV-1 infected subjects.
The Netherlands journal of medicine 1990;37(1-2):4-10.
1989: Peter Portegies; Jan de Gans; Joep M A Lange; M M Derix; H Speelman; Margreet Bakker; Sven A Danner; Jaap Goudsmit
Declining incidence of AIDS dementia complex after introduction of zidovudine treatment.
BMJ (Clinical research ed.) 1989;299(6703):819-21.
1989: Jaap Goudsmit; G Zwart; Margreet Bakker; Laura A Smit; Nicole Back; L Epstein; CL Kuiken; Joseph D'Amaro; Frank de Wolf
Antibody recognition of amino acid divergence within an HIV-1 neutralization epitope.
Research in virology 1989;140(5):419-36.
1989: Jaap Goudsmit; Margreet Bakker; Laura A Smit
Immunodominant B-cell clones responsive to an HIV-1 neutralization and cell fusion inhibition epitope in chimpanzee-to-chimpanzee passages of HTLV-IIIB and LAV-1.
Research in virology 1989;140(5):405-18.
1989: Charles A B Boucher; Frank de Wolf; J T Houweling; Margreet Bakker; J Dekker; Marijke Th L Roos; Roel A Coutinho; J van der Noordaa; Jaap Goudsmit
Antibody response to a synthetic peptide covering a LAV-1/HTLV-IIIB neutralization epitope and disease progression.
AIDS (London, England) 1989;3(2):71-6.
1989: T F Wolfs; Frank de Wolf; C Breederveld; L J Sjamsjoedin-Visser; M Roos; Margreet Bakker; Jaap Goudsmit
Low AIDS attack rate among Dutch haemophiliacs compared to homosexual men: a correlate of HIV antigenaemia frequencies.
Vox sanguinis 1989;57(2):127-32.
1989: Jaap Goudsmit; Margreet Bakker; Laura A Smit; R H Meloen
Specificity of chimpanzee antibodies binding a strain-specific HIV-1 neutralization epitope of the external envelope.
Journal of medical primatology 1989;18(3-4):357-62.
1989: D A van Tijn; Charles A B Boucher; Margreet Bakker; Jaap Goudsmit
Antigenicity of linear B-cell epitopes in the C1, V1, and V3 region of HIV-1 gp 120.
Journal of acquired immune deficiency syndromes 1989;2(3):303-6.
1988: F de Wolf; J M Lange; Margreet Bakker; S Tjong-A-Hung; C Hooykaas; R Coutinho; J van der Noordaa; J Goudsmit
Influenza-like syndrome in homosexual men: a prospective diagnostic study.
The Journal of the Royal College of General Practitioners 1988;38(315):443-5.
1988: T F Wolfs; C Breederveld; W J Krone; L vd Hoek; Margreet Bakker; Laura A Smit; Jaap Goudsmit
HIV-antibody seroconversions in Dutch haemophiliacs using heat-treated and non heat-treated coagulation factor concentrates.
Thrombosis and haemostasis 1988;59(3):396-9.
1988: Jaap Goudsmit; Charles A B Boucher; R H Meloen; L G Epstein; Laura A Smit; Lia van der Hoek; Margreet Bakker
Human antibody response to a strain-specific HIV-1 gp120 epitope associated with cell fusion inhibition.
AIDS (London, England) 1988;2(3):157-64.
1988: Jaap Goudsmit; CM Debouck; R H Meloen; Laura A Smit; Margreet Bakker; D M Asher; A V Wolff; C J Gibbs; D Carleton Gajdusek
Human immunodeficiency virus type 1 neutralization epitope with conserved architecture elicits early type-specific antibodies in experimentally infected chimpanzees.
Proceedings of the National Academy of Sciences of the United States of America 1988;85(12):4478-82.
1988: Jaap Goudsmit; Joep M A Lange; Laura A Smit; Margreet Bakker; Bep Klaver; Sven A Danner; Roel A Coutinho
Serodiagnostic profiles of HIV and HIV pathogenesis in vivo.
Haematologia 1988;21(2):71-81.
1987: Jaap Goudsmit; Frank de Wolf; B van de Wiel; Laura A Smit; Margreet Bakker; N Albrecht-van Lent; Roel A Coutinho
Spread of human T-cell leukemia virus (HTLV-I) in the Dutch homosexual community.
Journal of medical virology 1987;23(2):115-21.
1987: Jaap Goudsmit; Joep M A Lange; W J Krone; Marcel B M Teunissen; L G Epstein; Sven A Danner; H van den Berg; C Breederveld; Laura A Smit; Margreet Bakker
Pathogenesis of HIV and its implications for serodiagnosis and monitoring of antiviral therapy.
Journal of virological methods 1987;17(1-2):19-34.
1987: J Goudsmit; Laura A Smit; W J Krone; Margreet Bakker; J van der Noordaa; C J Gibbs; L G Epstein; D Carleton Gajdusek
IgG response to human immunodeficiency virus in experimentally infected chimpanzees mimics the IgG response in humans.
The Journal of infectious diseases 1987;155(2):327-31.
1986: J Goudsmit; E C Wolters; Margreet Bakker; Laura A Smit; J Van der Noordaa; E A Hische; J A Tutuarima; H J Van der Helm
Intrathecal synthesis of antibodies to HTLV-III in patients without AIDS or AIDS related complex.
British medical journal (Clinical research ed.) 1986;292(6530):1231-4.