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Charles Kooperberg

Research Profile

Physiology

Genes & Molecular Sequences

Single Nucleotide Polymorphism

Procedures

Concepts & Ideas

Devices

Oligonucleotide Array Sequence Analysis

Disorders

Activities & Behaviors

Computer Simulation

Living Beings

African Americans

Chemicals & Drugs

Estrogens, Conjugated (USP)

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Publications

TOP 3
Heather M Ochs-Balcom; Ulrike Peters; Leah Preus; John Robbins; Michael F Seldin; Hua Tang; Cheryl L Thompson; Timothy A Thornton; Jean Wactawski-Wende; Fouad Zakharia; Chris Carlson; Cara Carty; Zhao Chen; Thomas Hoffman; Carolyn M Hutter; Rebecca D Jackson; Nicholas A Johnson; Robert C Kaplan; Charles Kooperberg; Li Li; Song Liu; Marian L Neuhouser; Jing Nie; Lara E Sucheston
Association of DXA-derived bone mineral density and fat mass with African ancestry.
Sarah A Pendergrass; Alex Reiner; Eric S Torstenson; Robert Wallace; Lynn R Wilkens; Jose Luis Ambite; Christy L Avery; Kristin Brown-Gentry; Steven Buyske; Petra Bůžková; Dana C Crawford; Ewa Deelman; Scott Dudek; Megan D Fesinmeyer; Alex Frase; Robert Goodloe; Christopher A Haiman; Gerardo Heiss; Lucia A Hindorff; Chu-Nan Hsu; Rebecca D Jackson; Charles Kooperberg; Loic Le Marchand; Yi Lin; Tara C Matise; Kristine R Monroe; Larry Moreland; Sungshim L Park; Marylyn D Ritchie
Phenome-wide association study (PheWAS) for detection of pleiotropy within the Population Architecture using Genomics and Epidemiology (PAGE) Network.
Shelly L Gray; Charles Kooperberg; Aaron K Aragaki; Barbara B Cochrane; Michael J LaMonte; Jennifer G Robinson; Nancy F Woods; Andrea Z LaCroix
Statins, angiotensin-converting enzyme inhibitors, and physical performance in older women.

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All Publications

2013: Heather M Ochs-Balcom; Ulrike Peters; Leah Preus; John Robbins; Michael F Seldin; Hua Tang; Cheryl L Thompson; Timothy A Thornton; Jean Wactawski-Wende; Fouad Zakharia; Chris Carlson; Cara Carty; Zhao Chen; Thomas Hoffman; Carolyn M Hutter; Rebecca D Jackson; Nicholas A Johnson; Robert C Kaplan; Charles Kooperberg; Li Li; Song Liu; Marian L Neuhouser; Jing Nie; Lara E Sucheston
Association of DXA-derived bone mineral density and fat mass with African ancestry.
The Journal of clinical endocrinology and metabolism 2013;98(4):E713-7.
2013: Sarah A Pendergrass; Alex Reiner; Eric S Torstenson; Robert Wallace; Lynn R Wilkens; Jose Luis Ambite; Christy L Avery; Kristin Brown-Gentry; Steven Buyske; Petra Bůžková; Dana C Crawford; Ewa Deelman; Scott Dudek; Megan D Fesinmeyer; Alex Frase; Robert Goodloe; Christopher A Haiman; Gerardo Heiss; Lucia A Hindorff; Chu-Nan Hsu; Rebecca D Jackson; Charles Kooperberg; Loic Le Marchand; Yi Lin; Tara C Matise; Kristine R Monroe; Larry Moreland; Sungshim L Park; Marylyn D Ritchie
Phenome-wide association study (PheWAS) for detection of pleiotropy within the Population Architecture using Genomics and Epidemiology (PAGE) Network.
PLoS genetics 2013;9(1):e1003087.
2012: Shelly L Gray; Charles Kooperberg; Aaron K Aragaki; Barbara B Cochrane; Michael J LaMonte; Jennifer G Robinson; Nancy F Woods; Andrea Z LaCroix
Statins, angiotensin-converting enzyme inhibitors, and physical performance in older women.
Journal of the American Geriatrics Society 2012;60(12):2206-14.
2012: Alex P Reiner; Jennifer G Robinson; Paul L Auer; Sandra Beleza; Nora Franceschini; Charles Kooperberg; Ulrike Peters; Hua Tang
Genome-wide association and population genetic analysis of C-reactive protein in African American and Hispanic American women.
American journal of human genetics 2012;91(3):502-12.
2012: Indika Rajapakse; John A Hansen; Paul J Martin; Michael D Perlman; Charles Kooperberg
Multivariate detection of gene-gene interactions.
Genetic epidemiology 2012;36(6):622-30.
2012: James Y Dai; Li Hsu; Ying Huang; Benjamin A Logsdon; Ross L Prentice; Alexander P Reiner; Charles Kooperberg
Simultaneously testing for marginal genetic association and gene-environment interaction.
American journal of epidemiology 2012;176(2):164-73.
2012: Benjamin A Logsdon; Alexander P Reiner; Cara L Carty; James Y Dai; Charles Kooperberg
A novel variational Bayes multiple locus Z-statistic for genome-wide association studies with Bayesian model averaging.
Bioinformatics (Oxford, England) 2012;28(13):1738-44.
2012: Li Hsu; Carolyn Hutter; Shuo Jiao; James Y Dai; Ulrike Peters; Charles Kooperberg
Powerful cocktail methods for detecting genome-wide gene-environment interaction.
Genetic epidemiology 2012;36(3):183-94.
2012: Cara L Carty; Shelley Cole; Myriam Fornage; Nora Franceschini; Gerardo Heiss; Lucia A Hindorff; Barbara V Howard; Sue Mann; Lisa W Martin; Tara C Matise; Ross Prentice; Alexander P Reiner; Ying Zhang; Petra Buzková; Charles Kooperberg
Associations between incident ischemic stroke events and stroke and cardiovascular disease-related genome-wide association studies single nucleotide polymorphisms in the Population Architecture Using Genomics and Epidemiology study.
Circulation. Cardiovascular genetics 2012;5(2):210-6.
2012: Christina T L Chen; Zhao Chen; Lindsay Fernández-Rhodes; Gerardo Heiss; Charles Kooperberg; Kari E North; Aleksandar Rajkovic; Nancy F Woods; Robert Brzyski; Christopher S Carlson; Nora Franceschini
Replication of loci influencing ages at menarche and menopause in Hispanic women: the Women's Health Initiative SHARe Study.
Human molecular genetics 2012;21(6):1419-32.
2012: Eric Yi Liu; Teri A Manolio; Loic Le Marchand; Tara Matise; Kari E North; Ulrike Peters; Wei Wang; Aaron K Aragaki; Eric Boerwinkle; Steven Buyske; Chris Carlson; Cara Carty; Dana C Crawford; Jeff Haessler; Lucia A Hindorff; Charles Kooperberg; Yun Li
Genotype imputation of Metabochip SNPs using a study-specific reference panel of ~4,000 haplotypes in African Americans from the Women's Health Initiative.
Genetic epidemiology 2012;36(2):107-17.
2012: Cara L Carty; Carolyn M Hutter; Nicholas A Johnson; Ulrike Peters; Alexander P Reiner; Hua Tang; Charles Kooperberg
Genome-wide association study of body height in African Americans: the Women's Health Initiative SNP Health Association Resource (SHARe).
Human molecular genetics 2012;21(3):711-20.
2012: Christy L Avery; Steven Buyske; Cara L Carty; David Duggan; Megan D Fesinmeyer; Christopher A Haiman; Qianchuan He; Lucia A Hindorff; Janina M Jeff; Liviu Klein; Charles Kooperberg; Dan-Yu Lin; Karen L Mohlke; Kristen Patton; Ulrike Peters; Praveen Sethupathy; Ralph V Shohet; Nona Sotoodehnia; Eric A Whitsel; Alicia M Young; Dan E Arking; Kari E North
Fine-mapping and initial characterization of QT interval loci in African Americans.
PLoS genetics 2012;8(8):e1002870.
2012: REHAN QAYYUM; Andrew B Singleton; Beverly M Snively; Weihong Tang; James G Wilson; Lisa R Yanek; Elad Ziv; Alan B Zonderman; Melissa A Austin; Diane M Becker; Lewis C Becker; Michele K Evans; Aaron R Folsom; Santhi Ganesh; Tamara B Harris; Charles Kooperberg; Leslie Lange; Guillaume Lettre; Yongmei Liu; Benjamin A Logsdon; Emile R Mohler; Michael A Nalls; Alexander P Reiner
A meta-analysis and genome-wide association study of platelet count and mean platelet volume in african americans.
PLoS genetics 2012;8(3):e1002491.
2012: Veronica Wendy Setiawan; Jens-S Vöckler; Lynne R Wilkens; Shagufta Yasmeen; Loïc Le Marchand; Ulrike Peters; Fredrick Schumacher; Michele Cote; Ewa Deelman; Megan D Fesinmeyer; Jeffrey Haessler; Christopher A Haiman; Brian E Henderson; Rebecca D Jackson; Charles Kooperberg
HNF1B and endometrial cancer risk: results from the PAGE study.
PloS one 2012;7(1):e30390.
2011: Nora Franceschini; Tiana Garrett; Philip Greenland; Jonathan Bella; Lyle G Best; Eric Boerwinkle; Ebony Bookman; Petra Bůzková; Cara Carty; Shelley A Cole; Ewa Deelman; Charles Eaton; Lucia A Hindorff; Nancy Swords Jenny; Charles Kooperberg; Dan-Yu Lin; Yi Lin; Kari E North; Bruce Psaty; Alexander P Reiner; Darin Taverna; Jens-S Vöckler; Alicia M Young; Gerardo Heiss
Association of genetic variants and incident coronary heart disease in multiethnic cohorts: the PAGE study.
Circulation. Cardiovascular genetics 2011;4(6):661-72.
2011: Christy L Avery; Eric Boerwinkle; Myriam Fornage; Qianchuan He; Gerardo Heiss; Lucia A Hindorff; Charles Kooperberg; James B Meigs; Kari E North; James S Pankow; Sarah A Pendergrass; Bruce M Psaty; Marylyn D Ritchie; Jerome I Rotter; Kent D Taylor; Lynne R Wilkens; Jose L Ambite; Dan Yu Lin
A phenomics-based strategy identifies loci on APOC1, BRAP, and PLCG1 associated with metabolic syndrome phenotype domains.
PLoS genetics 2011;7(10):e1002322.
2011: Tara C Matise; Kari E North; Ulrike Peters; Marylyn D Ritchie; Jose Luis Ambite; Steven Buyske; Christopher S Carlson; Shelley A Cole; Dana C Crawford; Christopher A Haiman; Jonathan L Haines; Gerardo Heiss; Lucia A Hindorff; Charles Kooperberg; Teri A Manolio; Loic Le Marchand
The Next PAGE in understanding complex traits: design for the analysis of Population Architecture Using Genetics and Epidemiology (PAGE) Study.
American journal of epidemiology 2011;174(7):849-59.
2011: Carolyn M Hutter; Charles Kooperberg; Heather M Ochs-Balcom; Cara L Carty; Christina T L Chen; Thomas E Rohan; Tao Wang; Alicia M Young; Ulrike Peters
Replication of breast cancer GWAS susceptibility loci in the Women's Health Initiative African American SHARe Study.
Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2011;20(9):1950-9.
2011: Cara L Carty; Charles Kooperberg; Marian L Neuhouser; Lesley Tinker; Barbara Howard; Jean Wactawski-Wende; Shirley A A Beresford; Linda Snetselaar; Mara Z Vitolins; Matthew Allison; Nicole Budrys; Ross Prentice; Ulrike Peters
Low-fat dietary pattern and change in body-composition traits in the Women's Health Initiative Dietary Modification Trial.
The American journal of clinical nutrition 2011;93(3):516-24.
2011: Jacques Rossouw; Paul Bray; Jingmin Liu; Charles Kooperberg; Judith Hsia; Cora Lewis; Mary Cushman; Denise Bonds; Susan Hendrix; George Papanicolaou; Timothy Howard; David Herrington
Estrogen receptor polymorphisms and the vascular effects of hormone therapy.
Arteriosclerosis, thrombosis, and vascular biology 2011;31(2):464-9.
2011: Rowan T Chlebowski; Karen C Johnson; Dorothy Lane; Mary Pettinger; Charles Kooperberg; Jean Wactawski-Wende; Thomas E Rohan; Mary J O'Sullivan; Shagufta Yasmeen; Robert A Hiatt; James M Shikany; Mara Vitolins; Janu Khandekar; F Allan Hubbell
25-hydroxyvitamin D concentration, vitamin D intake and joint symptoms in postmenopausal women.
Maturitas 2011;68(1):73-8.
2010: Charles Kooperberg; Michael LeBlanc; Valerie Obenchain
Risk prediction using genome-wide association studies.
Genetic epidemiology 2010;34(7):643-52.
2010: Michael LeBlanc; Charles Kooperberg
Boosting predictions of treatment success.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(31):13559-60.
2010: Diana R Kerwin; Yinghua Zhang; Jane Morley Kotchen; Mark A Espeland; Linda Van Horn; Kathleen M McTigue; Jennifer G Robinson; Lynda Powell; Charles Kooperberg; Laura H Coker; Raymond Hoffmann
The cross-sectional relationship between body mass index, waist-hip ratio, and cognitive performance in postmenopausal women enrolled in the Women's Health Initiative.
Journal of the American Geriatrics Society 2010;58(8):1427-32.
2010: Barbara V Howard; J David Curb; Charles B Eaton; Charles Kooperberg; Judith Ockene; John B Kostis; Mary Pettinger; Aleksandar Rajkovic; Jennifer G Robinson; Jacques Rossouw; Gloria Sarto; James M Shikany; Linda Van Horn
Low-fat dietary pattern and lipoprotein risk factors: the Women's Health Initiative Dietary Modification Trial.
The American journal of clinical nutrition 2010;91(4):860-74.
2010: Sholom Wacholder; Patricia Hartge; Ross Prentice; Montserrat Garcia-Closas; Heather Spencer Feigelson; W Ryan Diver; Michael J Thun; David G Cox; Susan E Hankinson; Peter Kraft; Bernard Rosner; Christine D Berg; Louise A Brinton; Jolanta Lissowska; Mark E Sherman; Rowan Chlebowski; Charles Kooperberg; Rebecca D Jackson; Dennis W Buckman; Peter Hui; Ruth Pfeiffer; Kevin B Jacobs; Gilles D Thomas; Robert N Hoover; Mitchell H Gail; STEPHEN CHANOCK; David J Hunter
Performance of common genetic variants in breast-cancer risk models.
The New England journal of medicine 2010;362(11):986-93.
2009: James Y Dai; Michael LeBlanc; Nicholas L Smith; Bruce Psaty; Charles Kooperberg
SHARE: an adaptive algorithm to select the most informative set of SNPs for candidate genetic association.
Biostatistics (Oxford, England) 2009;10(4):680-93.
2009: Michael LeBlanc; Charles Kooperberg
Adaptively weighted association statistics.
Genetic epidemiology 2009;33(5):442-52.
2009: Jeremy Walston; Amy M Matteini; Caroline Nievergelt; Leslie A Lange; Dani M Fallin; Nir Barzilai; Elad Ziv; Ludmila Pawlikowska; Pui Kwok; Steve R Cummings; Charles Kooperberg; Andrea LaCroix; Russell P Tracy; Gil Atzmon; Ethan M Lange; Alex P Reiner
Inflammation and stress-related candidate genes, plasma interleukin-6 levels, and longevity in older adults.
Experimental gerontology 2009;44(5):350-5.
2009: Indika Rajapakse; Michael D Perlman; d scalzo; Charles Kooperberg; Mark Groudine; Steven T Kosak
The emergence of lineage-specific chromosomal topologies from coordinate gene regulation.
Proceedings of the National Academy of Sciences of the United States of America 2009;106(16):6679-84.
2009: Meryl Leboff; Rupali Narweker; Andrea LaCroix; LieLing Wu; Rebecca Jackson; Jennifer Shuwen Lee; Douglas Charles Bauer; Jane Cauley; Charles Kooperberg; Cora Lewis; ASHA THOMAS; Steven Cummings
Homocysteine levels and risk of hip fracture in postmenopausal women.
The Journal of clinical endocrinology and metabolism 2009;94(4):1207-13.
2009: James Y Dai; Michael LeBlanc; Charles Kooperberg
Semiparametric estimation exploiting covariate independence in two-phase randomized trials.
Biometrics 2009;65(1):178-87.
2009: Shelly L Gray; Andrea Z LaCroix; Aaron K Aragaki; Mary McDermott; Barbara B Cochrane; Charles Kooperberg; Anne M Murray; Beatriz L Rodriguez; Henry Black; Nancy F Woods
Angiotensin-converting enzyme inhibitor use and incident frailty in women aged 65 and older: prospective findings from the Women's Health Initiative Observational Study.
Journal of the American Geriatrics Society 2009;57(2):297-303.
2009: Sharon J Pitteri; Samir M Hanash; Aaron Aragaki; Lynn M Amon; Lin Chen; Tina Busald Buson; Sophie Paczesny; Hiroyuki Katayama; Hong Wang; Melissa M Johnson; Qing Zhang; Martin McIntosh; Pei Wang; Charles Kooperberg; Jacques E Rossouw; Rebecca D Jackson; JoAnn E Manson; Judith Hsia; Simin Liu; Lisa Martin; Ross L Prentice
Postmenopausal estrogen and progestin effects on the serum proteome.
Genome medicine 2009;1(12):121.
2008: Rowan T Chlebowski; Karen C Johnson; Charles Kooperberg; Mary Pettinger; Jean Wactawski-Wende; Thomas E Rohan; Jacques Rossouw; Dorothy S Lane; Mary J O'Sullivan; Shagufta Yasmeen; Robert A Hiatt; James M Shikany; Mara Vitolins; Janu Khandekar; F Allan Hubbell
Calcium plus vitamin D supplementation and the risk of breast cancer.
Journal of the National Cancer Institute 2008;100(22):1581-91.
2008: Jacques E Rossouw; Mary Cushman; Philip Greenland; Donald M Lloyd-Jones; Paul Bray; Charles Kooperberg; Mary Pettinger; Jennifer Robinson; Susan Hendrix; Judith Hsia
Inflammatory, lipid, thrombotic, and genetic markers of coronary heart disease risk in the women's health initiative trials of hormone therapy.
Archives of internal medicine 2008;168(20):2245-53.
2008: Robert Kaplan; Aileen P McGinn; Alison E Baird; Susan Hendrix; Charles Kooperberg; John Lynch; Daniel M Rosenbaum; Karen C Johnson; Howard D Strickler; Sylvia Wassertheil-Smoller
Inflammation and hemostasis biomarkers for predicting stroke in postmenopausal women: the Women's Health Initiative Observational Study.
Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association 2008;17(6):344-55.
2008: Ross L Prentice; Rowan T Chlebowski; Marcia L Stefanick; JoAnn E Manson; Robert D Langer; Mary Pettinger; Susan Hendrix; F Allan Hubbell; Charles Kooperberg; Lewis H Kuller; Dorothy S Lane; Anne McTiernan; Mary J O'Sullivan; Jacques E Rossouw; Garnet L Anderson
Conjugated equine estrogens and breast cancer risk in the Women's Health Initiative clinical trial and observational study.
American journal of epidemiology 2008;167(12):1407-15.
2008: Ross L Prentice; Rowan T Chlebowski; Marcia L Stefanick; JoAnn E Manson; Mary Pettinger; Susan Hendrix; F Allan Hubbell; Charles Kooperberg; Lewis H Kuller; Dorothy S Lane; Anne McTiernan; Mary Jo O'Sullivan; Jacques E Rossouw; Garnet L Anderson
Estrogen plus progestin therapy and breast cancer in recently postmenopausal women.
American journal of epidemiology 2008;167(10):1207-16.
2008: Jennifer Shuwen Lee; Andrea Z LaCroix; LieLing Wu; Jane A Cauley; Rebecca D Jackson; Charles Kooperberg; Meryl Leboff; John Robbins; Cora E Lewis; Douglas Charles Bauer; Steven R Cummings
Associations of serum sex hormone-binding globulin and sex hormone concentrations with hip fracture risk in postmenopausal women.
The Journal of clinical endocrinology and metabolism 2008;93(5):1796-803.
2008: Aileen P McGinn; Robert Kaplan; Joe Verghese; Daniel M Rosenbaum; Bruce M Psaty; Alison E Baird; John K Lynch; Philip A Wolf; Charles Kooperberg; Joseph C Larson; Sylvia Wassertheil-Smoller
Walking speed and risk of incident ischemic stroke among postmenopausal women.
Stroke; a journal of cerebral circulation 2008;39(4):1233-9.
2008: Sylvia Wassertheil-Smoller; Charles Kooperberg; Aileen P McGinn; Robert Kaplan; Judith Hsia; Susan Hendrix; JoAnn E Manson; Jeffrey S Berger; Lewis H Kuller; Matthew A Allison; Alison E Baird
Lipoprotein-associated phospholipase A2, hormone use, and the risk of ischemic stroke in postmenopausal women.
Hypertension 2008;51(4):1115-22.
2008: Charles Kooperberg; Michael Leblanc
Increasing the power of identifying gene x gene interactions in genome-wide association studies.
Genetic epidemiology 2008;32(3):255-63.
2008: Nicholas L Smith; Joshua C Bis; S Biagiotti; K Rice; Thomas Lumley; Charles Kooperberg; Kerri L Wiggins; Susan R Heckbert; Bruce M Psaty
Variation in 24 hemostatic genes and associations with non-fatal myocardial infarction and ischemic stroke.
Journal of thrombosis and haemostasis : JTH 2008;6(1):45-53.
2007: John Robbins; Aaron Aragaki; Charles Kooperberg; Nelson Watts; Jean Wactawski-Wende; Rebecca D Jackson; Meryl Leboff; Cora E Lewis; Zhao Chen; Marcia L Stefanick; Jane A Cauley
Factors associated with 5-year risk of hip fracture in postmenopausal women.
JAMA : the journal of the American Medical Association 2007;298(20):2389-98.
2007: Andrew D Strand; Zachary C Baquet; Aaron Aragaki; Peter Holmans; Lichuan Yang; Carine Cleren; M Flint Beal; Lesley Jones; Charles Kooperberg; James M Olson; Kevin R Jones
Expression profiling of Huntington's disease models suggests that brain-derived neurotrophic factor depletion plays a major role in striatal degeneration.
The Journal of neuroscience : the official journal of the Society for Neuroscience 2007;27(43):11758-68.
2007: Alexandre Kuhn; Darlene R Goldstein; Angela Hodges; Andrew D Strand; Thierry Sengstag; Charles Kooperberg; Kristina Becanovic; Mahmoud A Pouladi; Kirupa Sathasivam; Jang-Ho Cha; Anthony J Hannan; Michael R Hayden; Blair R Leavitt; Stephen B Dunnett; Robert J Ferrante; Roger L Albin; Peggy F Shelbourne; Mauro Delorenzi; Sarah J Augood; Richard L M Faull; James M Olson; Gillian P Bates; Lesley Jones; Ruth Luthi-Carter
Mutant huntingtin's effects on striatal gene expression in mice recapitulate changes observed in human Huntington's disease brain and do not differ with mutant huntingtin length or wild-type huntingtin dosage.
Human molecular genetics 2007;16(15):1845-61.
2007: Kristin D Marciante; Joshua C Bis; Mark J Rieder; Alexander P Reiner; Thomas Lumley; Stephanie A Monks; Charles Kooperberg; Christopher Carlson; Susan R Heckbert; Bruce M Psaty
Renin-angiotensin system haplotypes and the risk of myocardial infarction and stroke in pharmacologically treated hypertensive patients.
American journal of epidemiology 2007;166(1):19-27.
2007: Andrew D Strand; Aaron Aragaki; Zachary C Baquet; Angela Hodges; Philip Cunningham; Peter Holmans; Kevin R Jones; Lesley Jones; Charles Kooperberg; James M Olson
Conservation of regional gene expression in mouse and human brain.
PLoS genetics 2007;3(4):e59.
2007: Hisashi Tanaka; Yi Cao; Donald Bergstrom; Charles Kooperberg; Stephen J Tapscott; Meng-Chao Yao
Intrastrand annealing leads to the formation of a large DNA palindrome and determines the boundaries of genomic amplification in human cancer.
Molecular and cellular biology 2007;27(6):1993-2002.
2007: Charles Kooperberg; Joshua C Bis; Kristin D Marciante; Susan R Heckbert; Thomas Lumley; Bruce M Psaty
Logic regression for analysis of the association between genetic variation in the renin-angiotensin system and myocardial infarction or stroke.
American journal of epidemiology 2007;165(3):334-43.
2007: Garnet L Anderson; Charles Kooperberg; Nancy Geller; Jacques E Rossouw; Mary Pettinger; Ross L Prentice
Monitoring and reporting of the Women's Health Initiative randomized hormone therapy trials.
Clinical trials (London, England) 2007;4(3):207-17.
2007: Charles Kooperberg; Mary Cushman; Judith Hsia; Jennifer G Robinson; Aaron Aragaki; John K Lynch; Alison E Baird; Karen C Johnson; Lewis H Kuller; Shirley A A Beresford; Beatriz L Rodriguez
Can biomarkers identify women at increased stroke risk? The Women's Health Initiative Hormone Trials.
PLoS clinical trials 2007;2(6):e28.
2006: James Y Dai; Ingo Ruczinski; Michael LeBlanc; Charles Kooperberg
Imputation methods to improve inference in SNP association studies.
Genetic epidemiology 2006;30(8):690-702.
2006: Susan Hendrix; Sylvia Wassertheil-Smoller; Karen C Johnson; Barbara V Howard; Charles Kooperberg; Jacques E Rossouw; Maurizio Trevisan; Aaron Aragaki; Alison E Baird; Paul F Bray; Julie E Buring; Michael H Criqui; David Herrington; John K Lynch; Stephen R Rapp; James Torner
Effects of conjugated equine estrogen on stroke in the Women's Health Initiative.
Circulation 2006;113(20):2425-34.
2006: Angela Hodges; Andrew D Strand; Aaron Aragaki; Alexandre Kuhn; Thierry Sengstag; Gareth Hughes; Lyn A Elliston; Cathy Hartog; Darlene R Goldstein; Doris Thu; Zane R Hollingsworth; Francois Collin; Beth Synek; Peter Holmans; Anne B Young; Nancy S Wexler; Mauro Delorenzi; Charles Kooperberg; Sarah J Augood; Richard L M Faull; James M Olson; Lesley Jones; Ruth Luthi-Carter
Regional and cellular gene expression changes in human Huntington's disease brain.
Human molecular genetics 2006;15(6):965-77.
2006: Yi Cao; Roshan M. Kumar; Bennett H Penn; Charlotte A Berkes; Charles Kooperberg; Laurie A Boyer; Richard A Young; Stephen J Tapscott
Global and gene-specific analyses show distinct roles for Myod and Myog at a common set of promoters.
The EMBO journal 2006;25(3):502-11.
2006: Pentti M Rautaharju; Charles Kooperberg; Joseph C Larson; Andrea LaCroix
Electrocardiographic predictors of incident congestive heart failure and all-cause mortality in postmenopausal women: the Women's Health Initiative.
Circulation 2006;113(4):481-9.
2006: Pentti M Rautaharju; Charles Kooperberg; Joseph C Larson; Andrea LaCroix
Electrocardiographic abnormalities that predict coronary heart disease events and mortality in postmenopausal women: the Women's Health Initiative.
Circulation 2006;113(4):473-80.
2006: Lesley Jones; Darlene R Goldstein; Gareth Hughes; Andrew D Strand; Francois Collin; Stephen B Dunnett; Charles Kooperberg; Aaron Aragaki; James M Olson; Sarah J Augood; Richard L M Faull; Ruth Luthi-Carter; Valentina Moskvina; Angela K Hodges
Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data.
BMC bioinformatics 2006;7():211.
2006: Michael LeBlanc; James Moon; Charles Kooperberg
Extreme regression.
Biostatistics (Oxford, England) 2006;7(1):71-84.
2005: Charles Kooperberg; Aaron Aragaki; Andrew D Strand; James M Olson
Significance testing for small microarray experiments.
Statistics in medicine 2005;24(15):2281-98.
2005: David Barad; Charles Kooperberg; Jean Wactawski-Wende; James Liu; Susan Hendrix; Nelson B Watts
Prior oral contraception and postmenopausal fracture: a Women's Health Initiative observational cohort study.
Fertility and sterility 2005;84(2):374-83.
2005: Andrew D Strand; Aaron Aragaki; Dennis Shaw; Thomas D Bird; Janice Holton; Christopher Turner; Stephen J Tapscott; Sarah J Tabrizi; Anthony H V Schapira; Charles Kooperberg; James M Olson
Gene expression in Huntington's disease skeletal muscle: a potential biomarker.
Human molecular genetics 2005;14(13):1863-76.
2005: Holly Janes; Margaret Sullivan Pepe; Charles Kooperberg; Polly Newcomb
Identifying target populations for screening or not screening using logic regression.
Statistics in medicine 2005;24(9):1321-38.
2005: Charles Kooperberg; Ingo Ruczinski
Identifying interacting SNPs using Monte Carlo logic regression.
Genetic epidemiology 2005;28(2):157-70.
2004: Susan R Heckbert; Charles Kooperberg; Monika Maria Safford; Bruce M Psaty; Judith Hsia; Anne McTiernan; J Michael Gaziano; William H Frishman; J David Curb
Comparison of self-report, hospital discharge codes, and adjudication of cardiovascular events in the Women's Health Initiative.
American journal of epidemiology 2004;160(12):1152-8.
2004: Ruth Etzioni; Seth Falcon; Peter H Gann; Charles Kooperberg; David F Penson; Meir J Stampfer
Prostate-specific antigen and free prostate-specific antigen in the early detection of prostate cancer: do combination tests improve detection?
Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2004;13(10):1640-5.
2004: Dirk Schübeler; David M MacAlpine; d scalzo; Christiane Wirbelauer; Charles Kooperberg; Fred van Leeuwen; Daniel E Gottschling; Laura P O'Neill; Bryan M Turner; Jeffrey Delrow; Stephen P Bell; Mark Groudine
The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote.
Genes & development 2004;18(11):1263-71.
2004: Zhao Chen; Charles Kooperberg; Mary Pettinger; Tamsen Bassford; Jane A Cauley; Andrea Z LaCroix; Cora E Lewis; Simon Kipersztok; Carolyn Borne; Rebecca D Jackson
Validity of self-report for fractures among a multiethnic cohort of postmenopausal women: results from the Women's Health Initiative observational study and clinical trials.
Menopause (New York, N.Y.) 2004;11(3):264-74.
2003: J David Curb; Anne McTiernan; Susan R Heckbert; Charles Kooperberg; Janet Stanford; Michael Nevitt; Karen C Johnson; Lori Proulx-Burns; Lisa Pastore; Michael Criqui; Sandra Daugherty
Outcomes ascertainment and adjudication methods in the Women's Health Initiative.
Annals of epidemiology 2003;13(9 Suppl):S122-8.
2003: Ruth Etzioni; Charles Kooperberg; Margaret Sullivan Pepe; Robert Smith; Peter H Gann
Combining biomarkers to detect disease with application to prostate cancer.
Biostatistics (Oxford, England) 2003;4(4):523-38.
2003: Anne McTiernan; Charles Kooperberg; Emily White; Sara Wilcox; Ralph Coates; LUCILE ADAMS-CAMPBELL; Nancy Woods; Judith K Ockene
Recreational physical activity and the risk of breast cancer in postmenopausal women: the Women's Health Initiative Cohort Study.
JAMA : the journal of the American Medical Association 2003;290(10):1331-6.
2003: Sylvia Wassertheil-Smoller; Susan Hendrix; Marian C Limacher; Gerardo Heiss; Charles Kooperberg; Alison Baird; Theodore A Kotchen; J David Curb; Henry Black; Jacques E Rossouw; Aaron Aragaki; Monika Maria Safford; Evan Stein; Somchai Laowattana; W. Mysiw
Effect of estrogen plus progestin on stroke in postmenopausal women: the Women's Health Initiative: a randomized trial.
JAMA : the journal of the American Medical Association 2003;289(20):2673-84.
2003: Michael LeBlanc; Charles Kooperberg; Thomas M Grogan; Thomas P Miller
Directed indices for exploring gene expression data.
Bioinformatics (Oxford, England) 2003;19(6):686-93.
2003: Jay C Vary; Vamsi K Gangaraju; Jun Qin; Carolyn Church Landel; Charles Kooperberg; Blaine Bartholomew; Toshio Tsukiyama
Yeast Isw1p forms two separable complexes in vivo.
Molecular and cellular biology 2003;23(1):80-91.
2002: Dirk Schübeler; d scalzo; Charles Kooperberg; Bas van Steensel; Jeffrey Delrow; Mark Groudine
Genome-wide DNA replication profile for Drosophila melanogaster: a link between transcription and replication timing.
Nature genetics 2002;32(3):438-42.
2002: Charles Kooperberg; Simonetta Sipione; Michael LeBlanc; Andrew D Strand; Elena Cattaneo; James M Olson
Evaluating test statistics to select interesting genes in microarray experiments.
Human molecular genetics 2002;11(19):2223-32.
2002: Andrew D Strand; James M Olson; Charles Kooperberg
Estimating the statistical significance of gene expression changes observed with oligonucleotide arrays.
Human molecular genetics 2002;11(19):2207-21.
2002: Simonetta Sipione; Dorotea Rigamonti; Marta Valenza; Chiara Zuccato; Luciano Conti; Joel Pritchard; Charles Kooperberg; James M Olson; Elena Cattaneo
Early transcriptional profiles in huntingtin-inducible striatal cells by microarray analyses.
Human molecular genetics 2002;11(17):1953-65.
2002: Edmond Y W Chan; Ruth Luthi-Carter; Andrew D Strand; Steven M Solano; Sarah A Hanson; Molly M DeJohn; Charles Kooperberg; Kathryn O Chase; Marian DiFiglia; Anne B Young; Blair R Leavitt; Jang-Ho Cha; Neil Aronin; Michael R Hayden; James M Olson
Increased huntingtin protein length reduces the number of polyglutamine-induced gene expression changes in mouse models of Huntington's disease.
Human molecular genetics 2002;11(17):1939-51.
2002: Ruth Luthi-Carter; Andrew D Strand; Sarah A Hanson; Charles Kooperberg; Gabriele Schilling; Albert R La Spada; Diane E Merry; Anne B Young; Christopher A Ross; David R Borchelt; James M Olson
Polyglutamine and transcription: gene expression changes shared by DRPLA and Huntington's disease mouse models reveal context-independent effects.
Human molecular genetics 2002;11(17):1927-37.
2002: Ruth Luthi-Carter; Sarah A Hanson; Andrew D Strand; Donald Bergstrom; Wanjoo Chun; Nikki L Peters; Annette M Woods; Edmond Y W Chan; Charles Kooperberg; Dimitri Krainc; Anne B Young; Stephen J Tapscott; James M Olson
Dysregulation of gene expression in the R6/2 model of polyglutamine disease: parallel changes in muscle and brain.
Human molecular genetics 2002;11(17):1911-26.
2002: Jacques E Rossouw; Garnet L Anderson; Ross L Prentice; Andrea Z LaCroix; Charles Kooperberg; Marcia L Stefanick; Rebecca D Jackson; Shirley A A Beresford; Barbara V Howard; Karen C Johnson; Jane Morley Kotchen; Judith K Ockene
Risks and benefits of estrogen plus progestin in healthy postmenopausal women: principal results From the Women's Health Initiative randomized controlled trial.
JAMA : the journal of the American Medical Association 2002;288(3):321-33.
2002: Ingo Ruczinski; Charles Kooperberg; Richard Bonneau; David Baker
Distributions of beta sheets in proteins with application to structure prediction.
Proteins 2002;48(1):85-97.
2002: Charles Kooperberg; Thomas G Fazzio; Jeffrey Delrow; Toshio Tsukiyama
Improved background correction for spotted DNA microarrays.
Journal of computational biology : a journal of computational molecular cell biology 2002;9(1):55-66.
2001: Thomas G Fazzio; Charles Kooperberg; Jesse P Goldmark; C Neal; R Basom; Jeffrey Delrow; Toshio Tsukiyama
Widespread collaboration of Isw2 and Sin3-Rpd3 chromatin remodeling complexes in transcriptional repression.
Molecular and cellular biology 2001;21(19):6450-60.
2001: Charles Kooperberg; Ingo Ruczinski; M L LeBlanc; Li Hsu
Sequence analysis using logic regression.
Genetic epidemiology 2001;21 Suppl 1():S626-31.
2000: D Casso; Emily White; Ruth E Patterson; Tanya Agurs-Collins; Charles Kooperberg; Pamela S Haines
Correlates of serum lycopene in older women.
Nutrition and cancer 2000;36(2):163-9.
1999: Kim Simons; Ingo Ruczinski; Charles Kooperberg; B A Fox; C Bystroff; David Baker
Improved recognition of native-like protein structures using a combination of sequence-dependent and sequence-independent features of proteins.
Proteins 1999;34(1):82-95.
1997: Charles Kooperberg; D B Clarkson
Hazard regression with interval-censored data.
Biometrics 1997;53(4):1485-94.
1997: Kim Simons; Charles Kooperberg; E Huang; David Baker
Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions.
Journal of molecular biology 1997;268(1):209-25.
1996: I H Wright; Charles Kooperberg; B A Bonar; Gerard Bashein
Statistical modeling to predict elective surgery time. Comparison with a computer scheduling system and surgeon-provided estimates.
Anesthesiology 1996;85(6):1235-45.

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