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Atsutaka Kubosaki

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Jay W Shin; Takahiro Suzuki; Haruka Yabukami; Yuki Hasegawa; Yoshihide Hayashizaki; Mami Kishima; Atsutaka Kubosaki; Noriko Ninomiya; Harukazu Suzuki
Establishment of single-cell screening system for the rapid identification of transcriptional modulators involved in direct cell reprogramming.
Atsutaka Kubosaki; Jay W Shin; Christophe Simon; Yoshinari Ando; Erina Furuhata; Ryota Hasegawa; Yoshihide Hayashizaki; Takahiro Suzuki; Yasuhiro Tomaru; Harukazu Suzuki
CpG site-specific alteration of hydroxymethylcytosine to methylcytosine beyond DNA replication.
Takahiro Suzuki; Haruka Yabukami-Okuda; Michiel de Hoon; Yuki Hasegawa; Yoshihide Hayashizaki; Atsutaka Kubosaki; Mika Nakano-Ikegaya; Satomi Saga-Hatano; Jessica Severin; Jay W Shin; Christophe Simon; Harukazu Suzuki
Reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts.

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All Publications

2012: Jay W Shin; Takahiro Suzuki; Haruka Yabukami; Yuki Hasegawa; Yoshihide Hayashizaki; Mami Kishima; Atsutaka Kubosaki; Noriko Ninomiya; Harukazu Suzuki
Establishment of single-cell screening system for the rapid identification of transcriptional modulators involved in direct cell reprogramming.
Nucleic acids research 2012;40(21):e165.
2012: Atsutaka Kubosaki; Jay W Shin; Christophe Simon; Yoshinari Ando; Erina Furuhata; Ryota Hasegawa; Yoshihide Hayashizaki; Takahiro Suzuki; Yasuhiro Tomaru; Harukazu Suzuki
CpG site-specific alteration of hydroxymethylcytosine to methylcytosine beyond DNA replication.
Biochemical and biophysical research communications 2012;426(1):141-7.
2012: Takahiro Suzuki; Haruka Yabukami-Okuda; Michiel de Hoon; Yuki Hasegawa; Yoshihide Hayashizaki; Atsutaka Kubosaki; Mika Nakano-Ikegaya; Satomi Saga-Hatano; Jessica Severin; Jay W Shin; Christophe Simon; Harukazu Suzuki
Reconstruction of monocyte transcriptional regulatory network accompanies monocytic functions in human fibroblasts.
PloS one 2012;7(3):e33474.
2011: Yoshinari Ando; A Maxwell Burroughs; piero carninci; Joe Chiba; Hisashi Hirano; Yoko Ino; Hideya Kawaji; Ryuichiro Kimura; Atsutaka Kubosaki; Ayako Morinaga; Harukazu Suzuki; Maiko Tagata; Yasuhiro Tomaru; Yoshihide Hayashizaki
Nuclear pore complex protein mediated nuclear localization of dicer protein in human cells.
PloS one 2011;6(8):e23385.
2010: Atsutaka Kubosaki; Gabriella Lindgren; Michihira Tagami; Christophe Simon; Yasuhiro Tomaru; Hisashi Miura; Takahiro Suzuki; Erik Arner; Alistair R R Forrest; Katharine M Irvine; Kate Schroder; Yuki Hasegawa; Mutsumi Kanamori-Katayama; Michael Rehli; David A Hume; Jun Kawai; Masanori Suzuki; Harukazu Suzuki; Yoshihide Hayashizaki
The combination of gene perturbation assay and ChIP-chip reveals functional direct target genes for IRF8 in THP-1 cells.
Molecular immunology 2010;47(14):2295-302.
2010: Alistair Forrest; Mutsumi Kanamori-Katayama; Yasuhiro Tomaru; T Lassmann; N Ninomiya; Y Takahashi; M J L de Hoon; Atsutaka Kubosaki; A Kaiho; M Suzuki; Jun Yasuda; Jun Kawai; Yoshihide Hayashizaki; D A Hume; Harukazu Suzuki
Induction of microRNAs, mir-155, mir-222, mir-424 and mir-503, promotes monocytic differentiation through combinatorial regulation.
Leukemia 2010;24(2):460-6.
2010: Anton Kratz; Erik Arner; Rintaro Saito; Atsutaka Kubosaki; Jun Kawai; Harukazu Suzuki; piero carninci; Takahiro Arakawa; Masaru Tomita; Yoshihide Hayashizaki; Carsten O Daub
Core promoter structure and genomic context reflect histone 3 lysine 9 acetylation patterns.
BMC genomics 2010;11():257.
2009: Ryan J Taft; Evgeny Glazov; Nicole Cloonan; Cas Simons; Stuart Stephen; Geoffrey J Faulkner; Timo Lassmann; Alistair Forrest; Sean M Grimmond; Kate Schroder; Katharine M Irvine; Takahiro Arakawa; Mari Nakamura; Atsutaka Kubosaki; Kengo Hayashida; Chika Kawazu; Mitsuyoshi Murata; Hiromi Nishiyori; Shiro Fukuda; Jun Kawai; Carsten O Daub; David A Hume; Harukazu Suzuki; Valerio Orlando; piero carninci; Yoshihide Hayashizaki; John S Mattick
Tiny RNAs associated with transcription start sites in animals.
Nature genetics 2009;41(5):572-8.
2009: Yasuhiro Tomaru; Christophe Simon; Alistair Forrest; Hisashi Miura; Atsutaka Kubosaki; Yoshihide Hayashizaki; Masanori Suzuki
Regulatory interdependence of myeloid transcription factors revealed by Matrix RNAi analysis.
Genome biology 2009;10(11):R121.
2009: Atsutaka Kubosaki; Yasuhiro Tomaru; Michihira Tagami; Erik Arner; Hisashi Miura; Takahiro Suzuki; Masanori Suzuki; Harukazu Suzuki; Yoshihide Hayashizaki
Genome-wide investigation of in vivo EGR-1 binding sites in monocytic differentiation.
Genome biology 2009;10(4):R41.
2008: Yoshiko Sugita-Konishi; Atsutaka Kubosaki; Mika Takahashi; B J Park; Toshitsugu Tanaka; Kosuke Takatori; Masao Hirose; Makoto Shibutani
Nivalenol and the targeting of the female reproductive system as well as haematopoietic and immune systems in rats after 90-day exposure through the diet.
Food additives & contaminants. Part A, Chemistry, analysis, control, exposure & risk assessment 2008;25(9):1118-27.
2008: Jean-Claude Henquin; Myriam Nenquin; Andras Szollosi; Atsutaka Kubosaki; A L Notkins
Insulin secretion in islets from mice with a double knockout for the dense core vesicle proteins islet antigen-2 (IA-2) and IA-2beta.
The Journal of endocrinology 2008;196(3):573-81.
2008: Atsutaka Kubosaki; Maki Aihara; Bong Joo Park; Yoshitsugu Sugiura; Makoto Shibutani; Masao Hirose; Yoshihiko Suzuki; Kosuke Takatori; Yoshiko Sugita-Konishi
Immunotoxicity of nivalenol after subchronic dietary exposure to rats.
Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association 2008;46(1):253-8.
2006: Atsutaka Kubosaki; Shinichiro Nakamura; Anne Clark; John F Morris; Abner Louis Notkins
Disruption of the transmembrane dense core vesicle proteins IA-2 and IA-2beta causes female infertility.
Endocrinology 2006;147(2):811-5.
2005: Atsutaka Kubosaki; Shinichiro Nakamura; Abner Louis Notkins
Dense core vesicle proteins IA-2 and IA-2beta: metabolic alterations in double knockout mice.
Diabetes 2005;54 Suppl 2():S46-51.
2004: Atsutaka Kubosaki; Steffen Gross; Junnosuke Miura; Keiichi Saeki; Min Zhu; Shinichiro Nakamura; Wiljan Hendriks; Abner Louis Notkins
Targeted disruption of the IA-2beta gene causes glucose intolerance and impairs insulin secretion but does not prevent the development of diabetes in NOD mice.
Diabetes 2004;53(7):1684-91.
2004: Atsutaka Kubosaki; Junnosuke Miura; Abner Louis Notkins
IA-2 is not required for the development of diabetes in NOD mice.
Diabetologia 2004;47(1):149-50.
2003: Aki Kawagishi; Atsutaka Kubosaki; Natsumi Takeyama; Akikazu Sakudo; Keiichi Saeki; Yoshitsugu Matsumoto; Toshiharu Hayashi; Takashi Onodera
Analysis of T-cell receptor Vbeta gene from infiltrating T cells in insulitis and myocarditis in encephalomyocarditis virus-infected BALB/C mice.
Biochemical and biophysical research communications 2003;310(3):791-5.
2003: Atsutaka Kubosaki; Yukiko Nishimura-Nasu; Takuya Nishimura; Seiichi Yusa; Akikazu Sakudo; Keiichi Saeki; Yoshitsugu Matsumoto; Shigeyoshi Itohara; Takashi Onodera
Expression of normal cellular prion protein (PrP(c)) on T lymphocytes and the effect of copper ion: Analysis by wild-type and prion protein gene-deficient mice.
Biochemical and biophysical research communications 2003;307(4):810-3.
2002: Keiichi Saeki; Min Zhu; Atsutaka Kubosaki; Jingping Xie; Michael S Lan; Abner Louis Notkins
Targeted disruption of the protein tyrosine phosphatase-like molecule IA-2 results in alterations in glucose tolerance tests and insulin secretion.
Diabetes 2002;51(6):1842-50.
2002: Koichi Miura; Kerry M Jacques; Stacey Stauffer; Atsutaka Kubosaki; Kejin Zhu; Dianne S Hirsch; James Resau; Yi Zheng; Paul A Randazzo
ARAP1: a point of convergence for Arf and Rho signaling.
Molecular cell 2002;9(1):109-19.
2001: S Shimizu; N Saito; Atsutaka Kubosaki; S SungWook; Natsumi Takeyama; T Sakamoto; Yoshitsugu Matsumoto; Keiichi Saeki; Y Matsumoto; Takashi Onodera
Developmental expression and localization of IA-2 mRNA in mouse neuroendocrine tissues.
Biochemical and biophysical research communications 2001;288(1):165-71.
2001: Atsutaka Kubosaki; S Yusa; Y Nasu; Toshihide Nishimura; Yusuke Nakamura; Keiichi Saeki; Yoshitsugu Matsumoto; Shigeyoshi Itohara; Takashi Onodera
Distribution of cellular isoform of prion protein in T lymphocytes and bone marrow, analyzed by wild-type and prion protein gene-deficient mice.
Biochemical and biophysical research communications 2001;282(1):103-7.
2001: S W Seo; K Hara; Atsutaka Kubosaki; Y Nasu; Toshihide Nishimura; Keiichi Saeki; Yoshitsugu Matsumoto; Hideki Endo; Takashi Onodera
Comparative analysis of the prion protein open reading frame nucleotide sequences of two wild ruminants, the moufflon and golden takin.
Intervirology 2001;44(6):359-63.
2000: Atsutaka Kubosaki; A Ueno; Yoshitsugu Matsumoto; Kunio Doi; Keiichi Saeki; Takashi Onodera
Analysis of prion protein mRNA by in situ hybridization in brain and placenta of sheep.
Biochemical and biophysical research communications 2000;273(3):890-3.
2000: C Kuwahara; Atsutaka Kubosaki; Toshihide Nishimura; Y Nasu; Yusuke Nakamura; Keiichi Saeki; Yoshitsugu Matsumoto; Takashi Onodera
Enhanced expression of cellular prion protein gene by insulin or nerve growth factor in immortalized mouse neuronal precursor cell lines.
Biochemical and biophysical research communications 2000;268(3):763-6.
1999: C Kuwahara; A M Takeuchi; Toshihide Nishimura; K Haraguchi; Atsutaka Kubosaki; Yoshitsugu Matsumoto; Keiichi Saeki; Y Matsumoto; T Yokoyama; Shigeyoshi Itohara; Takashi Onodera
Prions prevent neuronal cell-line death.
Nature 1999;400(6741):225-6.