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Takashi Kuromori

Research Profile

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Mutagenesis, Insertional

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TOP 3
Hidefumi Hamasaki; Mieko Higuchi; Yuko Imura; Takashi Kuromori; Hiroaki Shimada; Naoki Takahashi; Takeshi Yoshizumi; Minami Matsui
SD3, an Arabidopsis thaliana homolog of TIM21, affects intracellular ATP levels and seedling development.
Keiko Yonekura-Sakakibara; Kazuo Shinozaki; Satoko Sugawara; Bunyapa Wangwattana; Mami Yamazaki; Atsushi Fukushima; Kousuke Hanada; Eri Inoue; Takuya Ito; Takashi Kuromori; Fumio Matsuda; Ryo Nakabayashi; Kazuki Saito
Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana.
Takashi Kuromori; Takuya Ito; Eriko Sugimoto; Kazuo Shinozaki
Arabidopsis mutant of AtABCG26, an ABC transporter gene, is defective in pollen maturation.

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All Publications

2012: Hidefumi Hamasaki; Mieko Higuchi; Yuko Imura; Takashi Kuromori; Hiroaki Shimada; Naoki Takahashi; Takeshi Yoshizumi; Minami Matsui
SD3, an Arabidopsis thaliana homolog of TIM21, affects intracellular ATP levels and seedling development.
Molecular plant 2012;5(2):461-71.
2012: Keiko Yonekura-Sakakibara; Kazuo Shinozaki; Satoko Sugawara; Bunyapa Wangwattana; Mami Yamazaki; Atsushi Fukushima; Kousuke Hanada; Eri Inoue; Takuya Ito; Takashi Kuromori; Fumio Matsuda; Ryo Nakabayashi; Kazuki Saito
Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana.
The Plant journal : for cell and molecular biology 2012;69(1):154-67.
2011: Takashi Kuromori; Takuya Ito; Eriko Sugimoto; Kazuo Shinozaki
Arabidopsis mutant of AtABCG26, an ABC transporter gene, is defective in pollen maturation.
Journal of plant physiology 2011;168(16):2001-5.
2011: Takashi Kuromori; Eriko Sugimoto; Kazuo Shinozaki
Arabidopsis mutants of AtABCG22, an ABC transporter gene, increase water transpiration and drought susceptibility.
The Plant journal : for cell and molecular biology 2011;67(5):885-94.
2011: Kousuke Hanada; Yuji Sawada; Takashi Kuromori; Romy Klausnitzer; Kazuki Saito; Tetsuro Toyoda; Kazuo Shinozaki; Wen-Hsiung Li; Masami Yokota Hirai
Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.
Molecular biology and evolution 2011;28(1):377-82.
2010: Taishi Umezawa; Kazuo Nakashima; Takuya Miyakawa; Takashi Kuromori; Masaru Tanokura; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Molecular basis of the core regulatory network in ABA responses: sensing, signaling and transport.
Plant & cell physiology 2010;51(11):1821-39.
2010: Takashi Kuromori; Kazuo Shinozaki
ABA transport factors found in Arabidopsis ABC transporters.
Plant signaling & behavior 2010;5(9):1124-6.
2010: Takashi Kuromori; Takaaki Miyaji; Hikaru Yabuuchi; Hidetada Shimizu; Eriko Sugimoto; Asako Kamiya; Yoshinori Moriyama; Kazuo Shinozaki
ABC transporter AtABCG25 is involved in abscisic acid transport and responses.
Proceedings of the National Academy of Sciences of the United States of America 2010;107(5):2361-6.
2009: Kousuke Hanada; Takashi Kuromori; Fumiyoshi Myouga; Tetsuro Toyoda; Kazuo Shinozaki
Increased expression and protein divergence in duplicate genes is associated with morphological diversification.
PLoS genetics 2009;5(12):e1000781.
2009: Yuko Makita; Norio Kobayashi; Yoshiki Mochizuki; Yuko Yoshida; Satomi Asano; Naohiko Heida; Mrinalini Deshpande; Rinki Bhatia; Akihiro Matsushima; Manabu Ishii; Shuji Kawaguchi; Kei Iida; Kosuke Hanada; Takashi Kuromori; Motoaki Seki; Kazuo Shinozaki; Tetsuro Toyoda
PosMed-plus: an intelligent search engine that inferentially integrates cross-species information resources for molecular breeding of plants.
Plant & cell physiology 2009;50(7):1249-59.
2009: Takashi Kuromori; Shinya Takahashi; Youichi Kondou; Kazuo Shinozaki; Minami Matsui
Phenome analysis in plant species using loss-of-function and gain-of-function mutants.
Plant & cell physiology 2009;50(7):1215-31.
2009: Kousuke Hanada; Takashi Kuromori; Fumiyoshi Myouga; Tetsuro Toyoda; Wen-Hsiung Li; Kazuo Shinozaki
Evolutionary persistence of functional compensation by duplicate genes in Arabidopsis.
Genome biology and evolution 2009;1():409-14.
2008: Fumiyoshi Myouga; Chieko Hosoda; Taishi Umezawa; Haruko Iizumi; Takashi Kuromori; Reiko Motohashi; Yuriko Shono; Noriko Nagata; Masahiko Ikeuchi; Kazuo Shinozaki
A heterocomplex of iron superoxide dismutases defends chloroplast nucleoids against oxidative stress and is essential for chloroplast development in Arabidopsis.
The Plant cell 2008;20(11):3148-62.
2008: Shimpei Hayashi; Tadashi Ishii; Toshiro Matsunaga; Rumi Tominaga; Takashi Kuromori; Takuji Wada; Kazuo Shinozaki; Takashi Hirayama
The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization.
Plant & cell physiology 2008;49(10):1522-35.
2008: Takashi Kuromori; Yoshitaka Azumi; Shun Hayakawa; Asako Kamiya; Yuko Imura; Takuji Wada; Kazuo Shinozaki
Homologous chromosome pairing is completed in crossover defective atzip4 mutant.
Biochemical and biophysical research communications 2008;370(1):98-103.
2007: Hiroki Ukitsu; Takashi Kuromori; Kiminori Toyooka; Yumi Goto; Ken Matsuoka; Eiji Sakuradani; Sakayu Shimizu; Asako Kamiya; Yuko Imura; Masahiro Yuguchi; Takuji Wada; Takashi Hirayama; Kazuo Shinozaki
Cytological and biochemical analysis of COF1, an Arabidopsis mutant of an ABC transporter gene.
Plant & cell physiology 2007;48(11):1524-33.
2007: Chunjie Tian; Eisuke Chikayama; Yuuri Tsuboi; Takashi Kuromori; Kazuo Shinozaki; Jun Kikuchi; Takashi Hirayama
Top-down phenomics of Arabidopsis thaliana: metabolic profiling by one- and two-dimensional nuclear magnetic resonance spectroscopy and transcriptome analysis of albino mutants.
The Journal of biological chemistry 2007;282(25):18532-41.
2007: Satoshi Iuchi; Hiroyuki Suzuki; Young-Cheon Kim; Atsuko Iuchi; Takashi Kuromori; Miyako Ueguchi-Tanaka; Tadao Asami; Isomaro Yamaguchi; Makoto Matsuoka; Masatomo Kobayashi; Masatoshi Nakajima
Multiple loss-of-function of Arabidopsis gibberellin receptor AtGID1s completely shuts down a gibberellin signal.
The Plant journal : for cell and molecular biology 2007;50(6):958-66.
2006: Nicola J Stacey; Takashi Kuromori; Yoshitaka Azumi; Gethin Roberts; Christian Breuer; Takuji Wada; Anthony Maxwell; Keith Roberts; Keiko Sugimoto-Shirasu
Arabidopsis SPO11-2 functions with SPO11-1 in meiotic recombination.
The Plant journal : for cell and molecular biology 2006;48(2):206-16.
2006: Fumiyoshi Myouga; Reiko Motohashi; Takashi Kuromori; Noriko Nagata; Kazuo Shinozaki
An Arabidopsis chloroplast-targeted Hsp101 homologue, APG6, has an essential role in chloroplast development as well as heat-stress response.
The Plant journal : for cell and molecular biology 2006;48(2):249-60.
2006: Yoshiteru Noutoshi; Takashi Kuromori; Takuji Wada; Takashi Hirayama; Asako Kamiya; Yuko Imura; Michiko Yasuda; Hideo Nakashita; Ken Shirasu; Kazuo Shinozaki
Loss of Necrotic Spotted Lesions 1 associates with cell death and defense responses in Arabidopsis thaliana.
Plant molecular biology 2006;62(1-2):29-42.
2006: Takashi Kuromori; Takuji Wada; Asako Kamiya; Masahiro Yuguchi; Takuro Yokouchi; Yuko Imura; Hiroko Takabe; Tetsuya Sakurai; Kenji Akiyama; Takashi Hirayama; Kiyotaka Okada; Kazuo Shinozaki
A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis.
The Plant journal : for cell and molecular biology 2006;47(4):640-51.
2006: Tomo Yoshida; Noriyuki Nishimura; Nobutaka Kitahata; Takashi Kuromori; Takuya Ito; Tadao Asami; Kazuo Shinozaki; Takashi Hirayama
ABA-hypersensitive germination3 encodes a protein phosphatase 2C (AtPP2CA) that strongly regulates abscisic acid signaling during germination among Arabidopsis protein phosphatase 2Cs.
Plant physiology 2006;140(1):115-26.
2005: Noriyuki Nishimura; Nobutaka Kitahata; Motoaki Seki; Yoshihiro Narusaka; Mari Narusaka; Takashi Kuromori; Tadao Asami; Kazuo Shinozaki; Takashi Hirayama
Analysis of ABA hypersensitive germination2 revealed the pivotal functions of PARN in stress response in Arabidopsis.
The Plant journal : for cell and molecular biology 2005;44(6):972-84.
2005: Takuya Ito; Reiko Motohashi; Takashi Kuromori; Yoshiteru Noutoshi; Motoaki Seki; Asako Kamiya; Saho Mizukado; Tetsuya Sakurai; Kazuo Shinozaki
A resource of 5,814 dissociation transposon-tagged and sequence-indexed lines of Arabidopsis transposed from start loci on chromosome 5.
Plant & cell physiology 2005;46(7):1149-53.
2005: Tetsuya Sakurai; Masakazu Satou; Kenji Akiyama; Kei Iida; Motoaki Seki; Takashi Kuromori; Takuya Ito; Akihiko Konagaya; Tetsuro Toyoda; Kazuo Shinozaki
RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome.
Nucleic acids research 2005;33(Database issue):D647-50.
2004: Hisatomi Harada; Takashi Kuromori; Takashi Hirayama; Kazuo Shinozaki; Roger A Leigh
Quantitative trait loci analysis of nitrate storage in Arabidopsis leading to an investigation of the contribution of the anion channel gene, AtCLC-c, to variation in nitrate levels.
Journal of experimental botany 2004;55(405):2005-14.
2004: Kentaro Takei; Nanae Ueda; Koh Aoki; Takashi Kuromori; Takashi Hirayama; Kazuo Shinozaki; Tomoyuki Yamaya; Hitoshi Sakakibara
AtIPT3 is a key determinant of nitrate-dependent cytokinin biosynthesis in Arabidopsis.
Plant & cell physiology 2004;45(8):1053-62.
2004: Takashi Kuromori; Takashi Hirayama; Yuki Kiyosue; Hiroko Takabe; Saho Mizukado; Tetsuya Sakurai; Kenji Akiyama; Asako Kamiya; Takuya Ito; Kazuo Shinozaki
A collection of 11 800 single-copy Ds transposon insertion lines in Arabidopsis.
The Plant journal : for cell and molecular biology 2004;37(6):897-905.
2004: Naoki Takahashi; Hirofumi Kuroda; Takashi Kuromori; Takashi Hirayama; Motoaki Seki; Kazuo Shinozaki; Hiroaki Shimada; Minami Matsui
Expression and interaction analysis of Arabidopsis Skp1-related genes.
Plant & cell physiology 2004;45(1):83-91.
2002: Takuya Ito; Reiko Motohashi; Takashi Kuromori; Saho Mizukado; Tetsuya Sakurai; Hiroko Kanahara; Motoaki Seki; Kazuo Shinozaki
A new resource of locally transposed Dissociation elements for screening gene-knockout lines in silico on the Arabidopsis genome.
Plant physiology 2002;129(4):1695-9.