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Ian Bancroft

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Genes & Molecular Sequences

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Rachel Brenchley; Rosalinda D'Amore; Jan Dvorak; Keith J Edwards; Bikram Gill; Yong Gu; Anthony Hall; Naxin Huo; Suzanne Kay; Arnaud Kerhornou; Paul Kersey; Sharyar Kianian; Melissa Kramer; Ming-Cheng Luo; Klaus F X Mayer; W Richard McCombie; Neil McKenzie; Matthias Pfeifer; Sunish Sehgal; Manuel Spannagl; Martin Trick; Darren Waite; Alexandra M Allen; Olin Anderson; Ian Bancroft; Gary L A Barker; Michael W Bevan; Dan Bolser; Neil Hall
Analysis of the bread wheat genome using whole-genome shotgun sequencing.
Andrea L Harper; Chie Hattori; Janet Higgins; Martin Trick; Rachel Wells; Peter Werner; Leah Clissold; Fiona Fraser; Ian Bancroft
Associative transcriptomics of traits in the polyploid crop species Brassica napus.
Carmel M O'Neill; U Rosas; H Tschoep; R Wells; M Brennan; P X Deng; C Hattori; C Morgan; D Baker; Ian Bancroft
Towards the genetic architecture of seed lipid biosynthesis and accumulation in Arabidopsis thaliana.

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All Publications

2012: Rachel Brenchley; Rosalinda D'Amore; Jan Dvorak; Keith J Edwards; Bikram Gill; Yong Gu; Anthony Hall; Naxin Huo; Suzanne Kay; Arnaud Kerhornou; Paul Kersey; Sharyar Kianian; Melissa Kramer; Ming-Cheng Luo; Klaus F X Mayer; W Richard McCombie; Neil McKenzie; Matthias Pfeifer; Sunish Sehgal; Manuel Spannagl; Martin Trick; Darren Waite; Alexandra M Allen; Olin Anderson; Ian Bancroft; Gary L A Barker; Michael W Bevan; Dan Bolser; Neil Hall
Analysis of the bread wheat genome using whole-genome shotgun sequencing.
Nature 2012;491(7426):705-10.
2012: Andrea L Harper; Chie Hattori; Janet Higgins; Martin Trick; Rachel Wells; Peter Werner; Leah Clissold; Fiona Fraser; Ian Bancroft
Associative transcriptomics of traits in the polyploid crop species Brassica napus.
Nature biotechnology 2012;30(8):798-802.
2012: Carmel M O'Neill; U Rosas; H Tschoep; R Wells; M Brennan; P X Deng; C Hattori; C Morgan; D Baker; Ian Bancroft
Towards the genetic architecture of seed lipid biosynthesis and accumulation in Arabidopsis thaliana.
Heredity 2012;108(2):115-23.
2012: Janet Higgins; Andreas Magusin; Martin Trick; Fiona Fraser; Ian Bancroft
Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus.
BMC genomics 2012;13():247.
2011: Carmel M O'Neill; David Baker; Gawain Bennett; Jonathan Clarke; Ian Bancroft
Two high linolenic mutants of Arabidopsis thaliana contain megabase-scale genome duplications encompassing the FAD3 locus.
The Plant journal : for cell and molecular biology 2011;68(5):912-8.
2011: Ian Bancroft; Leah Clissold; Fiona Fraser; Janet Higgins; Shengyi Liu; Yan Long; Jinling Meng; Colin Morgan; Xiaowu Wang; Rachel Wells; David Baker; Martin Trick
Dissecting the genome of the polyploid crop oilseed rape by transcriptome sequencing.
Nature biotechnology 2011;29(8):762-6.
2011: A M Smooker; R Wells; C Morgan; F Beaudoin; K Cho; F Fraser; Ian Bancroft
The identification and mapping of candidate genes and QTL involved in the fatty acid desaturation pathway in Brassica napus.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2011;122(6):1075-90.
2009: Foo Cheung; Martin Trick; Nizar Drou; Yong Pyo Lim; Jee-Young Park; Soo-Jin Kwon; Jin-A Kim; Rod Scott; J Chris Pires; Andrew H Paterson; Christopher D Town; Ian Bancroft
Comparative analysis between homoeologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence.
The Plant cell 2009;21(7):1912-28.
2009: Martin Trick; Yan Long; Jinling Meng; Ian Bancroft
Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing.
Plant biotechnology journal 2009;7(4):334-46.
2009: Martin Trick; Soo-Jin Kwon; Su Ryun Choi; Fiona Fraser; Eleni Soumpourou; Nizar Drou; Zhi Wang; Seo Yeon Lee; Tae-Jin Yang; Jeong-Hwan Mun; Andrew H Paterson; Christopher D Town; J Chris Pires; Yong Pyo Lim; Beom-Seok Park; Ian Bancroft
Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis.
BMC genomics 2009;10():539.
2009: Hyeran Kim; Su Ryun Choi; Jina Bae; Chang Pyo Hong; Seo Yeon Lee; Md Jamil Hossain; Dan Van Nguyen; Mina Jin; Beom-Seok Park; Jae-Wook Bang; Ian Bancroft; Yong Pyo Lim
Sequenced BAC anchored reference genetic map that reconciles the ten individual chromosomes of Brassica rapa.
BMC genomics 2009;10():432.
2009: Martin Trick; Foo Cheung; Nizar Drou; Fiona Fraser; Edward K Lobenhofer; Patrick Hurban; Andreas Magusin; Christopher D Town; Ian Bancroft
A newly-developed community microarray resource for transcriptome profiling in Brassica species enables the confirmation of Brassica-specific expressed sequences.
BMC plant biology 2009;9():50.
2008: Keita Suwabe; Colin Morgan; Ian Bancroft
Integration of Brassica A genome genetic linkage map between Brassica napus and B. rapa.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 2008;51(3):169-76.
2008: Carmel M O'Neill; Colin Morgan; Jane Kirby; Hendrik Tschoep; Polo Xiaoyi Deng; Mahon Brennan; Ulises Rosas; Fiona Fraser; Caroline Hall; Samantha Gill; Ian Bancroft
Six new recombinant inbred populations for the study of quantitative traits in Arabidopsis thaliana.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2008;116(5):623-34.
2007: Ki-Byung Lim; Tae-Jin Yang; Yoon-Jung Hwang; Jung Sun Kim; Jee-Young Park; Soo-Jin Kwon; Jina Kim; Bum Soon Choi; Myung-Ho Lim; Mina Jin; Ho-Il Kim; Hans de Jong; Ian Bancroft; Yongpyo Lim; Beom-Seok Park
Characterization of the centromere and peri-centromere retrotransposons in Brassica rapa and their distribution in related Brassica species.
The Plant journal : for cell and molecular biology 2007;49(2):173-83.
2006: Chang Pyo Hong; Prikshit Plaha; Dal-Hoe Koo; Tae-Jin Yang; Su Ryun Choi; Young Ki Lee; Taesik Uhm; Jae-Wook Bang; David Edwards; Ian Bancroft; Beom-Seok Park; Jungho Lee; Yong Pyo Lim
A Survey of the Brassica rapa genome by BAC-end sequence analysis and comparison with Arabidopsis thaliana.
Molecules and cells 2006;22(3):300-7.
2006: D Qiu; C Morgan; J Shi; Y Long; J Liu; R Li; X Zhuang; Y Wang; X Tan; E Dietrich; T Weihmann; C Everett; S Vanstraelen; P Beckett; F Fraser; Martin Trick; S Barnes; J Wilmer; R Schmidt; J Li; D Li; Jinling Meng; Ian Bancroft
A comparative linkage map of oilseed rape and its use for QTL analysis of seed oil and erucic acid content.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik 2006;114(1):67-80.
2006: Tae-Jin Yang; Jung Sun Kim; Soo-Jin Kwon; Ki-Byung Lim; Bum Soon Choi; Jin-A Kim; Mina Jin; Jee Young Park; Myung-Ho Lim; Ho-Il Kim; Yong Pyo Lim; Jason Jongho Kang; Jin-Han Hong; Chang-Bae Kim; Jong Bhak; Ian Bancroft; Beom-Seok Park
Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa.
The Plant cell 2006;18(6):1339-47.
2006: Christopher D Town; Foo Cheung; Rama Maiti; Jonathan Crabtree; Brian J Haas; Jennifer Wortman; Erin E Hine; Ryan Althoff; Tamara S Arbogast; Luke J Tallon; Marielle Vigouroux; Martin Trick; Ian Bancroft
Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy.
The Plant cell 2006;18(6):1348-59.
2005: Jee-Young Park; Dal-Hoe Koo; Chang Pyo Hong; S J Lee; J W Jeon; SH Lee; Pil-Yong Yun; Beom-Seok Park; H R Kim; Jae-Wook Bang; Prikshit Plaha; Ian Bancroft; Yong Pyo Lim
Physical mapping and microsynteny of Brassica rapa ssp. pekinensis genome corresponding to a 222 kbp gene-rich region of Arabidopsis chromosome 4 and partially duplicated on chromosome 5.
Molecular genetics and genomics : MGG 2005;274(6):579-88.
2005: Paul Beckett; Ian Bancroft; Martin Trick
Computational tools for Brassica-Arabidopsis comparative genomics.
Comparative and functional genomics 2005;6(3):147-52.
2004: Debashis Rana; Tom van den Boogaart; Carmel M O'Neill; Llewelyn Hynes; Elisabeth Bent; Lee Macpherson; Jee Young Park; Yong Pyo Lim; Ian Bancroft
Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives.
The Plant journal : for cell and molecular biology 2004;40(5):725-33.
2003: Carmel M O'Neill; Samantha Gill; Douglas Hobbs; Colin Morgan; Ian Bancroft
Natural variation for seed oil composition in Arabidopsis thaliana.
Phytochemistry 2003;64(6):1077-90.
2003: Giovanni Murtas; Paul H Reeves; Yong-Fu Fu; Ian Bancroft; Caroline Dean; George Coupland
A nuclear protease required for flowering-time regulation in Arabidopsis reduces the abundance of SMALL UBIQUITIN-RELATED MODIFIER conjugates.
The Plant cell 2003;15(10):2308-19.
2002: Mark L Crowe; Debashis Rana; Fiona Fraser; Ian Bancroft; Martin Trick
BACFinder: genomic localisation of large insert genomic clones based on restriction fingerprinting.
Nucleic acids research 2002;30(21):e118.
2002: Michael H Beale; Paul Dupree; Kathryn S Lilley; Jim L Beynon; Martin Trick; Jonathan Clarke; Michael Bevan; Ian Bancroft; Jonathan Jones; Sean T May; Karin van De Sande; Ottoline Leyser
GARNet, the Genomic Arabidopsis Resource Network.
Trends in plant science 2002;7(4):145-7.
2002: Ian Bancroft
Insights into cereal genomes from two draft genome sequences of rice.
Genome biology 2002;3(6):REVIEWS1015.
2001: K Mayer; G Murphy; R Tarchini; R Wambutt; G Volckaert; T Pohl; A Düsterhöft; Willem J Stiekema; Karl-Dieter Entian; N Terryn; Kai Lemcke; Dirk Haase; C R Hall; A M van Dodeweerd; Scott Tingey; Hans-Werner Mewes; Michael W Bevan; Ian Bancroft
Conservation of microstructure between a sequenced region of the genome of rice and multiple segments of the genome of Arabidopsis thaliana.
Genome research 2001;11(7):1167-74.
2001: Ian Bancroft
Duplicate and diverge: the evolution of plant genome microstructure.
Trends in genetics : TIG 2001;17(2):89-93.
2000: Carmel M O'Neill; Ian Bancroft
Comparative physical mapping of segments of the genome of Brassica oleracea var. alboglabra that are homoeologous to sequenced regions of chromosomes 4 and 5 of Arabidopsis thaliana.
The Plant journal : for cell and molecular biology 2000;23(2):233-43.
2000: Ian Bancroft
Insights into the structural and functional evolution of plant genomes afforded by the nucleotide sequences of chromosomes 2 and 4 of Arabidopsis thaliana.
Yeast (Chichester, England) 2000;17(1):1-5.
1999: A M van Dodeweerd; C R Hall; Elisabeth Bent; S J Johnson; Michael W Bevan; Ian Bancroft
Identification and analysis of homoeologous segments of the genomes of rice and Arabidopsis thaliana.
Genome / National Research Council Canada = Génome / Conseil national de recherches Canada 1999;42(5):887-92.
1999: Michael Bevan; Ian Bancroft; H W Mewes; Robert A Martienssen; R McCombie
Clearing a path through the jungle: progress in Arabidopsis genomics.
BioEssays : news and reviews in molecular, cellular and developmental biology 1999;21(2):110-20.
1998: Elisabeth Bent; S Johnson; Ian Bancroft
BAC representation of two low-copy regions of the genome of Arabidopsis thaliana.
The Plant journal : for cell and molecular biology 1998;13(6):849-55.
1997: Richard Macknight; Ian Bancroft; T Page; C Lister; R Schmidt; K Love; L Westphal; G Murphy; Sarah M Sherson; Christopher S Cobbett; Caroline Dean
FCA, a gene controlling flowering time in Arabidopsis, encodes a protein containing RNA-binding domains.
Cell 1997;89(5):737-45.
1993: Ian Bancroft; Caroline Dean
Transposition pattern of the maize element Ds in Arabidopsis thaliana.
Genetics 1993;134(4):1221-9.
1993: Ian Bancroft; Caroline Dean
Factors affecting the excision frequency of the maize transposable element Ds in Arabidopsis thaliana.
Molecular & general genetics : MGG 1993;240(1):65-72.
1993: Ian Bancroft; Jonathan D G Jones; Caroline Dean
Heterologous transposon tagging of the DRL1 locus in Arabidopsis.
The Plant cell 1993;5(6):631-8.
1992: Ian Bancroft; L Westphal; R Schmidt; Caroline Dean
PFGE-resolved RFLP analysis and long range restriction mapping of the DNA of Arabidopsis thaliana using whole YAC clones as probes.
Nucleic acids research 1992;20(23):6201-7.
1992: Ian Bancroft; A M Bhatt; C Sjodin; S Scofield; Jonathan D G Jones; Caroline Dean
Development of an efficient two-element transposon tagging system in Arabidopsis thaliana.
Molecular & general genetics : MGG 1992;233(3):449-61.
1991: Caroline Dean; C Sjodin; Ian Bancroft; E Lawson; C Lister; S Scofield; J Jones
Development of an efficient transposon tagging system in Arabidopsis thaliana.
Symposia of the Society for Experimental Biology 1991;45():63-75.