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Ite Laird-Offringa

Research Profile

Chemicals & Drugs

Physiology

DNA Methylation

Disorders

Concepts & Ideas

Phenomena

Protein Binding

Genes & Molecular Sequences

Amino Acid Sequences

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Publications

TOP 3
Yongheng Chen; Raja Dey; Ite A Laird-Offringa; Ana Carolina Dantas Machado; Remo Rohs; Darren L Bates; Po-Han Chen; Lin Chen
DNA binding by GATA transcription factor suggests mechanisms of DNA looping and long-range gene regulation.
Suhaida A Selamat; Kimberly D Siegmund; Wei Zhang; Ying Zhang; Mihaela Campan; Brian S Chung; Adi F Gazdar; Luc Girard; Jeffrey A Hagen; Michael N Koss; Stephen Lam; Wan L Lam; Ite A Laird-Offringa
Genome-scale analysis of DNA methylation in lung adenocarcinoma and integration with mRNA expression.
Suhaida A Selamat; Kimberly D Siegmund; Mihaela Campan; M Nicky Fyfe; Janice S Galler; Amit D Joshi; Keith M Kerr; Ite A Laird-Offringa
DNA methylation changes in atypical adenomatous hyperplasia, adenocarcinoma in situ, and lung adenocarcinoma.

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All Publications

2012: Yongheng Chen; Raja Dey; Ite A Laird-Offringa; Ana Carolina Dantas Machado; Remo Rohs; Darren L Bates; Po-Han Chen; Lin Chen
DNA binding by GATA transcription factor suggests mechanisms of DNA looping and long-range gene regulation.
Cell reports 2012;2(5):1197-206.
2012: Suhaida A Selamat; Kimberly D Siegmund; Wei Zhang; Ying Zhang; Mihaela Campan; Brian S Chung; Adi F Gazdar; Luc Girard; Jeffrey A Hagen; Michael N Koss; Stephen Lam; Wan L Lam; Ite A Laird-Offringa
Genome-scale analysis of DNA methylation in lung adenocarcinoma and integration with mRNA expression.
Genome research 2012;22(7):1197-211.
2011: Suhaida A Selamat; Kimberly D Siegmund; Mihaela Campan; M Nicky Fyfe; Janice S Galler; Amit D Joshi; Keith M Kerr; Ite A Laird-Offringa
DNA methylation changes in atypical adenomatous hyperplasia, adenocarcinoma in situ, and lung adenocarcinoma.
PloS one 2011;6(6):e21443.
2011: Meleeneh Kazarian; Ite A Laird-Offringa
Small-cell lung cancer-associated autoantibodies: potential applications to cancer diagnosis, early detection, and therapy.
Molecular cancer 2011;10():33.
2010: Mercedes vázquez-chantada; David Fernández-Ramos; Nieves Embade; Nuria Martínez-Lopez; Marta Varela-Rey; Ashwin Woodhoo; Zigmund Luka; Conrad Wagner; Paul P Anglim; Richard H Finnell; Juan Caballería; Ite A Laird-Offringa; Myriam Gorospe; Shelly C Lu; José M Mato; M Luz Martínez-Chantar
HuR/methyl-HuR and AUF1 regulate the MAT expressed during liver proliferation, differentiation, and carcinogenesis.
Gastroenterology 2010;138(5):1943-53.
2009: Meleeneh Kazarian; Joaquim Calbo; Natalie Proost; Catherine L Carpenter; Anton Berns; Ite A Laird-Offringa
Immune response in lung cancer mouse model mimics human anti-Hu reactivity.
Journal of neuroimmunology 2009;217(1-2):38-45.
2009: Jeffrey A Tsou; Meleeneh Kazarian; Ankur Patel; Janice S Galler; Ite A Laird-Offringa; Catherine L Carpenter; Stephanie J London
Low level anti-Hu reactivity: A risk marker for small cell lung cancer?
Cancer detection and prevention 2009;32(4):292-9.
2008: Kristine R Julien; Minako Sumita; Po-Han Chen; Ite A Laird-Offringa; Charles G Hoogstraten
Conformationally restricted nucleotides as a probe of structure-function relationships in RNA.
RNA (New York, N.Y.) 2008;14(8):1632-43.
2008: Paul P Anglim; Todd A Alonzo; Ite A Laird-Offringa
DNA methylation-based biomarkers for early detection of non-small cell lung cancer: an update.
Molecular cancer 2008;7():81.
2008: Paul P Anglim; Janice S Galler; Michael N Koss; Jeffrey A Hagen; Sally Turla; Mihaela Campan; Daniel J Weisenberger; Peter W Laird; Kimberly D Siegmund; Ite A Laird-Offringa
Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer.
Molecular cancer 2008;7():62.
2007: Jeffrey A Tsou; Janice S Galler; Anil Wali; Wei Ye; Kimberly D Siegmund; Susan Groshen; Peter W Laird; Sally Turla; Michael N Koss; Harvey I Pass; Ite A Laird-Offringa
DNA methylation profile of 28 potential marker loci in malignant mesothelioma.
Lung cancer (Amsterdam, Netherlands) 2007;58(2):220-30.
2007: Jeffrey A Tsou; Janice S Galler; Kimberly D Siegmund; Peter W Laird; Sally Turla; Wendy Cozen; Jeffrey A Hagen; Michael N Koss; Ite A Laird-Offringa
Identification of a panel of sensitive and specific DNA methylation markers for lung adenocarcinoma.
Molecular cancer 2007;6():70.
2007: Keith M Kerr; Janice S Galler; Jeffrey A Hagen; Peter W Laird; Ite A Laird-Offringa
The role of DNA methylation in the development and progression of lung adenocarcinoma.
Disease markers 2007;23(1-2):5-30.
2006: Michael J Law; Andrew J Rice; Patti Lin; Ite A Laird-Offringa
The role of RNA structure in the interaction of U1A protein with U1 hairpin II RNA.
RNA (New York, N.Y.) 2006;12(7):1168-78.
2006: Michael J Law; Michael Linde; Eric J Chambers; Chris Oubridge; Phinikoula S Katsamba; Lennart Nilsson; Ian S Haworth; Ite A Laird-Offringa
The role of positively charged amino acids and electrostatic interactions in the complex of U1A protein and U1 hairpin II RNA.
Nucleic acids research 2006;34(1):275-85.
2005: Jeffrey A Tsou; Linda Y C Shen; Kimberly D Siegmund; Tiffany I Long; Peter W Laird; Chandrika K Seneviratne; Michael N Koss; Harvey I Pass; Jeffrey A Hagen; Ite A Laird-Offringa
Distinct DNA methylation profiles in malignant mesothelioma, lung adenocarcinoma, and non-tumor lung.
Lung cancer (Amsterdam, Netherlands) 2005;47(2):193-204.
2005: Michael J Law; Eric J Chambers; Phinikoula S Katsamba; Ian S Haworth; Ite A Laird-Offringa
Kinetic analysis of the role of the tyrosine 13, phenylalanine 56 and glutamine 54 network in the U1A/U1 hairpin II interaction.
Nucleic acids research 2005;33(9):2917-28.
2004: Kimberly D Siegmund; Peter W Laird; Ite A Laird-Offringa
A comparison of cluster analysis methods using DNA methylation data.
Bioinformatics (Oxford, England) 2004;20(12):1896-904.
2004: Carina Johansson; L David Finger; Lukas Trantirek; Thomas D Mueller; Soyoun Kim; Ite A Laird-Offringa; Juli Feigon
Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target.
Journal of molecular biology 2004;337(4):799-816.
2004: Alberto M Marchevsky; Jeffrey A Tsou; Ite A Laird-Offringa
Classification of individual lung cancer cell lines based on DNA methylation markers: use of linear discriminant analysis and artificial neural networks.
The Journal of molecular diagnostics : JMD 2004;6(1):28-36.
2003: Sungmin Park-Lee; Soyoun Kim; Ite A Laird-Offringa
Characterization of the interaction between neuronal RNA-binding protein HuD and AU-rich RNA.
The Journal of biological chemistry 2003;278(41):39801-8.
2002: Hongwei Li; Sungmin Park; Britta Kilburn; Mary Anne Jelinek; Agnes Henschen-Edman; Dana W Aswad; Michael R Stallcup; Ite A Laird-Offringa
Lipopolysaccharide-induced methylation of HuR, an mRNA-stabilizing protein, by CARM1. Coactivator-associated arginine methyltransferase.
The Journal of biological chemistry 2002;277(47):44623-30.
2002: Phinikoula S Katsamba; Melina Bayramyan; Ian S Haworth; David G Myszka; Ite A Laird-Offringa
Complex role of the beta 2-beta 3 loop in the interaction of U1A with U1 hairpin II RNA.
The Journal of biological chemistry 2002;277(36):33267-74.
2002: Jeffrey A Tsou; Jeffrey A Hagen; Catherine L Carpenter; Ite A Laird-Offringa
DNA methylation analysis: a powerful new tool for lung cancer diagnosis.
Oncogene 2002;21(35):5450-61.
2002: Arvind K Virmani; Jeffrey A Tsou; Kimberly D Siegmund; Linda Y C Shen; Tiffany I Long; Peter W Laird; Adi F Gazdar; Ite A Laird-Offringa
Hierarchical clustering of lung cancer cell lines using DNA methylation markers.
Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology 2002;11(3):291-7.
2002: Phinikoula S Katsamba; Sungmin Park; Ite A Laird-Offringa
Kinetic studies of RNA-protein interactions using surface plasmon resonance.
Methods (San Diego, Calif.) 2002;26(2):95-104.
2001: Phinikoula S Katsamba; David G Myszka; Ite A Laird-Offringa
Two functionally distinct steps mediate high affinity binding of U1A protein to U1 hairpin II RNA.
The Journal of biological chemistry 2001;276(24):21476-81.
2000: N L Bernasconi; T A Wormhoudt; Ite A Laird-Offringa
Post-transcriptional deregulation of myc genes in lung cancer cell lines.
American journal of respiratory cell and molecular biology 2000;23(4):560-5.
2000: S Park; David G Myszka; M Yu; S J Littler; Ite A Laird-Offringa
HuD RNA recognition motifs play distinct roles in the formation of a stable complex with AU-rich RNA.
Molecular and cellular biology 2000;20(13):4765-72.
1999: Ite A Laird-Offringa
In vitro genetic analysis of RNA-binding proteins using phage display.
Methods in molecular biology (Clifton, N.J.) 1999;118():189-216.