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Charles Lee
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Research Profile (preview)
Concepts & Ideas
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Network (preview)
9
Perry, George
8
Scherer, Stephen
7
Carter, Nigel
7
Hurles, Matthew
6
Tchinda, Joëlle
6
Rubin, Mark
6
Redon, Richard
5
Tyler-Smith, Chris
5
Feuk, Lars
4
Chinnaiyan, Arul
4
Beroukhim, Rameen
4
Demichelis, Francesca
4
Perner, Sven
4
Morton, Cynthia
4
Setlur, Sunita
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Geonetwork of Charles Lee (preview)
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All Publications
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2009: Demichelis Francesca; Setlur Sunita R; Beroukhim Rameen; Perner Sven; Korbel Jan O; Lafargue Christopher J; Pflueger Dorothee; Pina Cara; Hofer Matthias D; Sboner Andrea; Svensson Maria A; Rickman David S; Urban Alex; Snyder Michael; Meyerson Matthew; Lee Charles; Gerstein Mark B; Kuefer Rainer; Rubin Mark A
Distinct genomic aberrations associated with ERG rearranged prostate cancer.
Genes, chromosomes & cancer 2009;48(4):366-80.
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2008: Perry George H; Yang Fengtang; Marques-Bonet Tomas; Murphy Carly; Fitzgerald Tomas; Lee Arthur S; Hyland Courtney; Stone Anne C; Hurles Matthew E; Tyler-Smith Chris; Eichler Evan E; Carter Nigel P; Lee Charles; Redon Richard
Copy number variation and evolution in humans and chimpanzees.
Genome research 2008;18(11):1698-710.
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2008: Xue Yali; Sun Donglin; Daly Allan; Yang Fengtang; Zhou Xue; Zhao Mengyao; Huang Ni; Zerjal Tatiana; Lee Charles; Carter Nigel P; Hurles Matthew E; Tyler-Smith Chris
Adaptive evolution of UGT2B17 copy-number variation.
American journal of human genetics 2008;83(3):337-46.
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2008: Lee Arthur S; Gutiérrez-Arcelus María; Perry George H; Vallender Eric J; Johnson Welkin E; Miller Gregory M; Korbel Jan O; Lee Charles
Analysis of copy number variation in the rhesus macaque genome identifies candidate loci for evolutionary and human disease studies.
Human molecular genetics 2008;17(8):1127-36.
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2008: Perry George H; Ben-Dor Amir; Tsalenko Anya; Sampas Nick; Rodriguez-Revenga Laia; Tran Charles W; Scheffer Alicia; Steinfeld Israel; Tsang Peter; Yamada N Alice; Park Han Soo; Kim Jong-Il; Seo Jeong-Sun; Yakhini Zohar; Laderman Stephen; Bruhn Laurakay; Lee Charles
The fine-scale and complex architecture of human copy-number variation.
American journal of human genetics 2008;82(3):685-95.
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2008: Lee Charles; Morton Cynthia C
Structural genomic variation and personalized medicine.
The New England journal of medicine 2008;358(7):740-1.
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2007: O'Neil Jennifer; Tchinda Joelle; Gutierrez Alejandro; Moreau Lisa; Maser Richard S; Wong Kwok-Kin; Li Wei; McKenna Keith; Liu X Shirley; Feng Bin; Neuberg Donna; Silverman Lewis; DeAngelo Daniel J; Kutok Jeffery L; Rothstein Rodney; DePinho Ronald A; Chin Lynda; Lee Charles; Look A Thomas
Alu elements mediate MYB gene tandem duplication in human T-ALL.
The Journal of experimental medicine 2007;204(13):3059-66.
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2007: Perry George H; Dominy Nathaniel J; Claw Katrina G; Lee Arthur S; Fiegler Heike; Redon Richard; Werner John; Villanea Fernando A; Mountain Joanna L; Misra Rajeev; Carter Nigel P; Lee Charles; Stone Anne C
Diet and the evolution of human amylase gene copy number variation.
Nature genetics 2007;39(10):1256-60.
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2007: Rodriguez-Revenga Laia; Mila Montserrat; Rosenberg Carla; Lamb Allen; Lee Charles
Structural variation in the human genome: the impact of copy number variants on clinical diagnosis.
Genetics in medicine : official journal of the American College of Medical Genetics 2007;9(9):600-6.
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2007: Scherer Stephen W; Lee Charles; Birney Ewan; Altshuler David M; Eichler Evan E; Carter Nigel P; Hurles Matthew E; Feuk Lars
Challenges and standards in integrating surveys of structural variation.
Nature genetics 2007;39(7 Suppl):S7-15.
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2007: Lee Charles; Iafrate A John; Brothman Arthur R
Copy number variations and clinical cytogenetic diagnosis of constitutional disorders.
Nature genetics 2007;39(7 Suppl):S48-54.
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2007: Demichelis F; Fall K; Perner S; Andrén O; Schmidt F; Setlur S R; Hoshida Y; Mosquera J-M; Pawitan Y; Lee C; Adami H-O; Mucci L A; Kantoff P W; Andersson S-O; Chinnaiyan A M; Johansson J-E; Rubin M A
TMPRSS2:ERG gene fusion associated with lethal prostate cancer in a watchful waiting cohort.
Oncogene 2007;26(31):4596-9.
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2007: Parker-Katiraee Layla; Carson Andrew R; Yamada Takahiro; Arnaud Philippe; Feil Robert; Abu-Amero Sayeda N; Moore Gudrun E; Kaneda Masahiro; Perry George H; Stone Anne C; Lee Charles; Meguro-Horike Makiko; Sasaki Hiroyuki; Kobayashi Keiko; Nakabayashi Kazuhiko; Scherer Stephen W
Identification of the imprinted KLF14 transcription factor undergoing human-specific accelerated evolution.
PLoS genetics 2007;3(5):e65.
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2007: Mertz Kirsten D; Setlur Sunita R; Dhanasekaran Saravana M; Demichelis Francesca; Perner Sven; Tomlins Scott; Tchinda Joëlle; Laxman Bharathi; Vessella Robert L; Beroukhim Rameen; Lee Charles; Chinnaiyan Arul M; Rubin Mark A
Molecular characterization of TMPRSS2-ERG gene fusion in the NCI-H660 prostate cancer cell line: a new perspective for an old model.
Neoplasia (New York, N.Y.) 2007;9(3):200-6.
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2007: Stranger Barbara E; Forrest Matthew S; Dunning Mark; Ingle Catherine E; Beazley Claude; Thorne Natalie; Redon Richard; Bird Christine P; de Grassi Anna; Lee Charles; Tyler-Smith Chris; Carter Nigel; Scherer Stephen W; Tavaré Simon; Deloukas Panagiotis; Hurles Matthew E; Dermitzakis Emmanouil T
Relative impact of nucleotide and copy number variation on gene expression phenotypes.
Science (New York, N.Y.) 2007;315(5813):848-53.
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2007: Freeman Jennifer L; Adeniyi Adeola; Banerjee Ruby; Dallaire Stephanie; Maguire Sean F; Chi Jianxiang; Ng Bee Ling; Zepeda Cinthya; Scott Carol E; Humphray Sean; Rogers Jane; Zhou Yi; Zon Leonard I; Carter Nigel P; Yang Fengtang; Lee Charles
Definition of the zebrafish genome using flow cytometry and cytogenetic mapping.
BMC genomics 2007;8():195.
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2006: Fiegler Heike; Redon Richard; Andrews Dan; Scott Carol; Andrews Robert; Carder Carol; Clark Richard; Dovey Oliver; Ellis Peter; Feuk Lars; French Lisa; Hunt Paul; Kalaitzopoulos Dimitrios; Larkin James; Montgomery Lyndal; Perry George H; Plumb Bob W; Porter Keith; Rigby Rachel E; Rigler Diane; Valsesia Armand; Langford Cordelia; Humphray Sean J; Scherer Stephen W; Lee Charles; Hurles Matthew E; Carter Nigel P
Accurate and reliable high-throughput detection of copy number variation in the human genome.
Genome research 2006;16(12):1566-74.
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2006: Khaja Razi; Zhang Junjun; MacDonald Jeffrey R; He Yongshu; Joseph-George Ann M; Wei John; Rafiq Muhammad A; Qian Cheng; Shago Mary; Pantano Lorena; Aburatani Hiroyuki; Jones Keith; Redon Richard; Hurles Matthew; Armengol Lluis; Estivill Xavier; Mural Richard J; Lee Charles; Scherer Stephen W; Feuk Lars
Genome assembly comparison identifies structural variants in the human genome.
Nature genetics 2006;38(12):1413-8.
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2006: Tchinda Joëlle; Lee Charles
Detecting copy number variation in the human genome using comparative genomic hybridization.
BioTechniques 2006;41(4):385, 387, 389 passim.
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2006: Perner Sven; Demichelis Francesca; Beroukhim Rameen; Schmidt Folke H; Mosquera Juan-Miguel; Setlur Sunita; Tchinda Joelle; Tomlins Scott A; Hofer Matthias D; Pienta Kenneth G; Kuefer Rainer; Vessella Robert; Sun Xiao-Wei; Meyerson Matthew; Lee Charles; Sellers William R; Chinnaiyan Arul M; Rubin Mark A
TMPRSS2:ERG fusion-associated deletions provide insight into the heterogeneity of prostate cancer.
Cancer research 2006;66(17):8337-41.
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2006: Freeman Jennifer L; Perry George H; Feuk Lars; Redon Richard; McCarroll Steven A; Altshuler David M; Aburatani Hiroyuki; Jones Keith W; Tyler-Smith Chris; Hurles Matthew E; Carter Nigel P; Scherer Stephen W; Lee Charles
Copy number variation: new insights in genome diversity.
Genome research 2006;16(8):949-61.
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2006: Perry George H; Tchinda Joelle; McGrath Sean D; Zhang Junjun; Picker Simon R; Cáceres Angela M; Iafrate A John; Tyler-Smith Chris; Scherer Stephen W; Eichler Evan E; Stone Anne C; Lee Charles
Hotspots for copy number variation in chimpanzees and humans.
Proceedings of the National Academy of Sciences of the United States of America 2006;103(21):8006-11.
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2006: McCarroll Steven A; Hadnott Tracy N; Perry George H; Sabeti Pardis C; Zody Michael C; Barrett Jeffrey C; Dallaire Stephanie; Gabriel Stacey B; Lee Charles; Daly Mark J; Altshuler David M;
Common deletion polymorphisms in the human genome.
Nature genetics 2006;38(1):86-92.
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2005: Tomlins Scott A; Rhodes Daniel R; Perner Sven; Dhanasekaran Saravana M; Mehra Rohit; Sun Xiao-Wei; Varambally Sooryanarayana; Cao Xuhong; Tchinda Joelle; Kuefer Rainer; Lee Charles; Montie James E; Shah Rajal B; Pienta Kenneth J; Rubin Mark A; Chinnaiyan Arul M
Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.
Science (New York, N.Y.) 2005;310(5748):644-8.
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2005: Garraway Levi A; Widlund Hans R; Rubin Mark A; Getz Gad; Berger Aaron J; Ramaswamy Sridhar; Beroukhim Rameen; Milner Danny A; Granter Scott R; Du Jinyan; Lee Charles; Wagner Stephan N; Li Cheng; Golub Todd R; Rimm David L; Meyerson Matthew L; Fisher David E; Sellers William R
Integrative genomic analyses identify MITF as a lineage survival oncogene amplified in malignant melanoma.
Nature 2005;436(7047):117-22.
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2004: Ligon Azra H; Morton Cynthia C; Bieber Frederick R; Fletcher Jonathan A; Giersch Anne B S; Lee Charles; Sandstrom Mary; Weremowicz Stanislawa; Xiao Sheng; Dal Cin Paola
Reporting of diagnostic cytogenetic results.
Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.] 2004;Appendix 1():Appendix 1D.
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2004: Iafrate A John; Feuk Lars; Rivera Miguel N; Listewnik Marc L; Donahoe Patricia K; Qi Ying; Scherer Stephen W; Lee Charles
Detection of large-scale variation in the human genome.
Nature genetics 2004;36(9):949-51.
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2004: Lee Charles; Smith Amanda
Molecular cytogenetic methodologies and a bacterial artificial chromosome (BAC) probe panel resource for genomic analyses in zebrafish.
Methods in cell biology 2004;77():241-54.
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2003: Wilkinson Kathryn; Velloso Elvira R P; Lopes Luiz Fernando; Lee Charles; Aster Jon C; Shipp Margaret A; Aguiar Ricardo C T
Cloning of the t(1;5)(q23;q33) in a myeloproliferative disorder associated with eosinophilia: involvement of PDGFRB and response to imatinib.
Blood 2003;102(12):4187-90.
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2001: Lee C; Fowler D J; Lemyre E; Sandstrom M M; Holmes L B; Morton C C
Prenatal diagnosis and molecular cytogenetics in a case of partial trisomy 14 and monosomy 21.
American journal of medical genetics 2001;100(3):246-50.
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2000: Guo L; Schreiber T H; Weremowicz S; Morton C C; Lee C; Zhou J
Identification and characterization of a novel polycystin family member, polycystin-L2, in mouse and human: sequence, expression, alternative splicing, and chromosomal localization.
Genomics 2000;64(3):241-51.
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