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Paul Lewis

Research Profile

Concepts & Ideas

Phenomena

Living Beings

Anatomy

Plastid Genomes

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Computational Biology

Physiology

Biological Evolution

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Software

Genes & Molecular Sequences

Pseudogenes

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Publications

TOP 3
Yu Fan; Rui Wu; Ming-Hui Chen; Lynn Kuo; Paul O Lewis
Choosing among partition models in Bayesian phylogenetics.
Mark T Holder; Paul O Lewis; David L Swofford
The akaike information criterion will not choose the no common mechanism model.
Mark T Holder; Jeet Sukumaran; Paul O Lewis
A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics.

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All Publications

2011: Yu Fan; Rui Wu; Ming-Hui Chen; Lynn Kuo; Paul O Lewis
Choosing among partition models in Bayesian phylogenetics.
Molecular biology and evolution 2011;28(1):523-32.
2010: Mark T Holder; Paul O Lewis; David L Swofford
The akaike information criterion will not choose the no common mechanism model.
Systematic biology 2010;59(4):477-85.
2008: Mark T Holder; Jeet Sukumaran; Paul O Lewis
A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics.
Systematic biology 2008;57(5):814-21.
2008: Norman J Wickett; Yu Fan; Paul O Lewis; Bernard Goffinet
Distribution and evolution of pseudogenes, gene losses, and a gene rearrangement in the plastid genome of the nonphotosynthetic liverwort, Aneura mirabilis (Metzgeriales, Jungermanniopsida).
Journal of molecular evolution 2008;67(1):111-22.
2005: Mark T Holder; Paul O Lewis; David L Swofford; Bret Larget
Hastings ratio of the LOCAL proposal used in Bayesian phylogenetics.
Systematic biology 2005;54(6):961-5.
2005: Louise A Lewis; Paul O Lewis
Unearthing the molecular phylodiversity of desert soil green algae (Chlorophyta).
Systematic biology 2005;54(6):936-47.
2005: Paul O Lewis; Mark T Holder; Kent E Holsinger
Polytomies and Bayesian phylogenetic inference.
Systematic biology 2005;54(2):241-53.
2003: Paul O Lewis
NCL: a C++ class library for interpreting data files in NEXUS format.
Bioinformatics (Oxford, England) 2003;19(17):2330-1.
2003: Mark T Holder; Paul O Lewis
Phylogeny estimation: traditional and Bayesian approaches.
Nature reviews. Genetics 2003;4(4):275-84.
2002: Matthew J Brauer; Mark T Holder; Laurie A Dries; Derrick J Zwickl; Paul O Lewis; David M Hillis
Genetic algorithms and parallel processing in maximum-likelihood phylogeny inference.
Molecular biology and evolution 2002;19(10):1717-26.
2002: Kent E Holsinger; Paul O Lewis; Dipak K Dey
A Bayesian approach to inferring population structure from dominant markers.
Molecular ecology 2002;11(7):1157-64.
2001: Paul O Lewis
A likelihood approach to estimating phylogeny from discrete morphological character data.
Systematic biology 2001;50(6):913-25.
2001: David L Swofford; Peter J Waddell; J P Huelsenbeck; P G Foster; Paul O Lewis; JS Rogers
Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods.
Systematic biology 2001;50(4):525-39.

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