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Scott Barolo

Research Profile

Chemicals & Drugs

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Evolution, Molecular

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Publications

TOP 3
Andrea I Ramos; Scott Barolo
Evolution of gene regulation: hybrid networks breed diversity.
Scott Barolo
Shadow enhancers: frequently asked questions about distributed cis-regulatory information and enhancer redundancy.
Michael A White; Davis S Parker; Scott Barolo; Barak A Cohen
A model of spatially restricted transcription in opposing gradients of activators and repressors.

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All Publications

2012: Andrea I Ramos; Scott Barolo
Evolution of gene regulation: hybrid networks breed diversity.
Current biology : CB 2012;22(23):R1009-11.
2012: Scott Barolo
Shadow enhancers: frequently asked questions about distributed cis-regulatory information and enhancer redundancy.
BioEssays : news and reviews in molecular, cellular and developmental biology 2012;34(2):135-41.
2012: Michael A White; Davis S Parker; Scott Barolo; Barak A Cohen
A model of spatially restricted transcription in opposing gradients of activators and repressors.
Molecular systems biology 2012;8():614.
2012: Nicole C Evans; Christina I Swanson; Scott Barolo
Sparkling insights into enhancer structure, function, and evolution.
Current topics in developmental biology 2012;98():97-120.
2011: Christina I Swanson; David B Schwimmer; Scott Barolo
Rapid evolutionary rewiring of a structurally constrained eye enhancer.
Current biology : CB 2011;21(14):1186-96.
2011: David S Parker; Andrea I Ramos; Michael A White; Barak A Cohen; Scott Barolo
The cis-regulatory logic of Hedgehog gradient responses: key roles for gli binding affinity, competition, and cooperativity.
Science signaling 2011;4(176):ra38.
2011: Amy R Strom; Scott Barolo
Using the game of Mastermind to teach, practice, and discuss scientific reasoning skills.
PLoS biology 2011;9(1):e1000578.
2010: Christina I Swanson; Nicole C Evans; Scott Barolo
Structural rules and complex regulatory circuitry constrain expression of a Notch- and EGFR-regulated eye enhancer.
Developmental cell 2010;18(3):359-70.
2008: Yan I Liu; Mikyung V Chang; Hui E Li; Scott Barolo; Jinhee L Chang; Timothy A Blauwkamp; Ken M Cadigan
The chromatin remodelers ISWI and ACF1 directly repress Wingless transcriptional targets.
Developmental biology 2008;323(1):41-52.
2008: Jinhee L Chang; Mikyung V Chang; Scott Barolo; Ken M Cadigan
Regulation of the feedback antagonist naked cuticle by Wingless signaling.
Developmental biology 2008;321(2):446-54.
2008: Lisa A Johnson; Ying Zhao; KL Golden; Scott Barolo
Reverse-engineering a transcriptional enhancer: a case study in Drosophila.
Tissue engineering. Part A 2008;14(9):1549-59.
2008: Christina I Swanson; Trish Hinrichs; Lisa A Johnson; Ying Zhao; Scott Barolo
A directional recombination cloning system for restriction- and ligation-free construction of GFP, DsRed, and lacZ transgenic Drosophila reporters.
Gene 2008;408(1-2):180-6.
2007: Yu-Chen Tsai; Jih-Guang Yao; Po-Hao Chen; James W Posakony; Scott Barolo; Jaesob Kim; Y Henry Sun
Upd/Jak/STAT signaling represses wg transcription to allow initiation of morphogenetic furrow in Drosophila eye development.
Developmental biology 2007;306(2):760-71.
2006: Scott Barolo
Transgenic Wnt/TCF pathway reporters: all you need is Lef?
Oncogene 2006;25(57):7505-11.
2006: Xin Sun; Scott Barolo; David Bilder; Mary Montgomery; Neelima Sinha
Emerging from the fog: hypotheses and paradigms in developmental biology--the Society for Developmental Biology 2005 Annual Meeting Report.
Developmental biology 2006;289(2):273-82.
2005: Brian Castro; Scott Barolo; Adina M Bailey; James W Posakony
Lateral inhibition in proneural clusters: cis-regulatory logic and default repression by Suppressor of Hairless.
Development (Cambridge, England) 2005;132(15):3333-44.
2004: Scott Barolo; Brian Castro; James W Posakony
New Drosophila transgenic reporters: insulated P-element vectors expressing fast-maturing RFP.
BioTechniques 2004;36(3):436-40, 442.
2002: Scott Barolo; Tammie Stone; Anne G Bang; James W Posakony
Default repression and Notch signaling: Hairless acts as an adaptor to recruit the corepressors Groucho and dCtBP to Suppressor of Hairless.
Genes & development 2002;16(15):1964-76.
2002: Scott Barolo; James W Posakony
Three habits of highly effective signaling pathways: principles of transcriptional control by developmental cell signaling.
Genes & development 2002;16(10):1167-81.
2000: Scott Barolo; Richard G Walker; A D Polyanovsky; G Freschi; T Keil; James W Posakony
A notch-independent activity of suppressor of hairless is required for normal mechanoreceptor physiology.
Cell 2000;103(6):957-69.
2000: Scott Barolo; L A Carver; James W Posakony
GFP and beta-galactosidase transformation vectors for promoter/enhancer analysis in Drosophila.
BioTechniques 2000;29(4):726, 728, 730, 732.
1998: Yutaka Nibu; Hengzhong Zhang; E Bajor; Scott Barolo; S Small; Michael Levine
dCtBP mediates transcriptional repression by Knirps, Krüppel and Snail in the Drosophila embryo.
The EMBO journal 1998;17(23):7009-20.
1997: Scott Barolo; M Levine
hairy mediates dominant repression in the Drosophila embryo.
The EMBO journal 1997;16(10):2883-91.
1996: J Zhou; Scott Barolo; Paul Szymanski; Michael Levine
The Fab-7 element of the bithorax complex attenuates enhancer-promoter interactions in the Drosophila embryo.
Genes & development 1996;10(24):3195-201.
1996: David N Arnosti; S Gray; Scott Barolo; J Zhou; Michael Levine
The gap protein knirps mediates both quenching and direct repression in the Drosophila embryo.
The EMBO journal 1996;15(14):3659-66.
1996: David N Arnosti; Scott Barolo; Michael Levine; S Small
The eve stripe 2 enhancer employs multiple modes of transcriptional synergy.
Development (Cambridge, England) 1996;122(1):205-14.
1995: S Gray; H Cai; Scott Barolo; Michael Levine
Transcriptional repression in the Drosophila embryo.
Philosophical transactions of the Royal Society of London. Series B, Biological sciences 1995;349(1329):257-62.