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Dmitri Loukinov

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Chromatin Immunoprecipitation

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TOP 3
Alexander Samoshkin; Stanimir Dulev; Dmitri Loukinov; Jeffrey A Rosenfeld; Alex Strunnikov
Condensin dysfunction in human cells induces nonrandom chromosomal breaks in anaphase, with distinct patterns for both unique and repeated genomic regions.
James M Moore; Natalia A Rabaia; Leslie E Smith; Steven J Collins; Christine M Disteche; Sara Fagerlie; Kay Gurley; Christopher J Kemp; Victor Lobanenkov; Dmitri Loukinov; Galina N Filippova
Loss of maternal CTCF is associated with peri-implantation lethality of Ctcf null embryos.
Victor Lobanenkov; Dmitri Loukinov; Elena Pugacheva
Environmental epigenomics and disease susceptibility. Keystone symposia on molecular and cellular biology. The Grove Park Hotel & Spa, Ashville, NC, USA, 27 March–1 April 2011.

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All Publications

2012: Alexander Samoshkin; Stanimir Dulev; Dmitri Loukinov; Jeffrey A Rosenfeld; Alex Strunnikov
Condensin dysfunction in human cells induces nonrandom chromosomal breaks in anaphase, with distinct patterns for both unique and repeated genomic regions.
Chromosoma 2012;121(2):191-9.
2012: James M Moore; Natalia A Rabaia; Leslie E Smith; Steven J Collins; Christine M Disteche; Sara Fagerlie; Kay Gurley; Christopher J Kemp; Victor Lobanenkov; Dmitri Loukinov; Galina N Filippova
Loss of maternal CTCF is associated with peri-implantation lethality of Ctcf null embryos.
PloS one 2012;7(4):e34915.
2011: Victor Lobanenkov; Dmitri Loukinov; Elena Pugacheva
Environmental epigenomics and disease susceptibility. Keystone symposia on molecular and cellular biology. The Grove Park Hotel & Spa, Ashville, NC, USA, 27 March–1 April 2011.
Epigenomics 2011;3(3):261-6.
2011: Stéphanie Renaud; Dmitri Loukinov; Loredana Alberti; Alexander Vostrov; Yoo-Wook Kwon; Fred T Bosman; Victor Lobanenkov; Jean Benhattar
BORIS/CTCFL-mediated transcriptional regulation of the hTERT telomerase gene in testicular and ovarian tumor cells.
Nucleic acids research 2011;39(3):862-73.
2011: Mkrtichyan Mikayel; Nina Movsesyan; Edward L Nelson; David H Cribbs; Hayk Davtyan; Anahit Ghochikyan; Amanda K Laust; Victor Lobanenkov; Dmitri Loukinov; Michael G Agadjanyan
Cancer-testis antigen, BORIS based vaccine delivered by dendritic cells is extremely effective against a very aggressive and highly metastatic mouse mammary carcinoma.
Cellular immunology 2011;270(2):188-97.
2010: Teruhiko Suzuki; Natsuki Kosaka-Suzuki; Svetlana Pack; Dong-Mi Shin; Jeongheon Yoon; Ziedulla Abdullaev; Elena Pugacheva; Herbert C Morse; Dmitri Loukinov; Victor Lobanenkov
Expression of a testis-specific form of Gal3st1 (CST), a gene essential for spermatogenesis, is regulated by the CTCF paralogous gene BORIS.
Molecular and cellular biology 2010;30(10):2473-84.
2010: Alexander Yakovlev; Maryam Khafizova; Ziedulla Abdullaev; Dmitri Loukinov; Alexei Kondratyev
Epigenetic regulation of caspase-3 gene expression in rat brain development.
Gene 2010;450(1-2):103-8.
2010: Elena Pugacheva; Teruhiko Suzuki; Svetlana D Pack; Natsuki Kosaka-Suzuki; Jeongheon Yoon; Alexander A Vostrov; Eugene Barsov; Alexander V Strunnikov; Herbert C Morse; Dmitri Loukinov; Victor Lobanenkov
The structural complexity of the human BORIS gene in gametogenesis and cancer.
PloS one 2010;5(11):e13872.
2010: Stéphanie Bougel; Stéphanie Renaud; Richard Braunschweig; Dmitri Loukinov; Herbert C Morse; Fred T Bosman; Victor Lobanenkov; Jean Benhattar
PAX5 activates the transcription of the human telomerase reverse transcriptase gene in B cells.
The Journal of pathology 2010;220(1):87-96.
2009: Sheryl T Smith; Priyankara Wickramasinghe; Andrew Olson; Dmitri Loukinov; Lan Lin; Joy Deng; Yanping Xiong; John J Rux; Ravi Sachidanandam; Hao Sun; Victor Lobanenkov; Jumin Zhou
Genome wide ChIP-chip analyses reveal important roles for CTCF in Drosophila genome organization.
Developmental biology 2009;328(2):518-28.
2009: Jung-Hyun Kim; Thomas Ebersole; Natalay Kouprina; Vladimir N Noskov; Jun-ichirou Ohzeki; Hiroshi Masumoto; Brankica Mravinac; Beth A Sullivan; Adam Pavlicek; Sinisa Dovat; Svetlana D Pack; Yoo-Wook Kwon; Patrick T Flanagan; Dmitri Loukinov; Victor Lobanenkov; Vladimir Larionov
Human gamma-satellite DNA maintains open chromatin structure and protects a transgene from epigenetic silencing.
Genome research 2009;19(4):533-44.
2008: Mkrtichyan Mikayel; Anahit Ghochikyan; Dmitri Loukinov; H Davtyan; Thomas E Ichim; David H Cribbs; Victor Lobanenkov; Michael G Agadjanyan
DNA, but not protein vaccine based on mutated BORIS antigen significantly inhibits tumor growth and prolongs the survival of mice.
Gene therapy 2008;15(1):61-4.
2007: Tae Hoon Kim; Ziedulla Abdullaev; Andrew D Smith; Keith A Ching; Dmitri Loukinov; Roland D Green; Michael Q Zhang; Victor Lobanenkov; Bing Ren
Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome.
Cell 2007;128(6):1231-45.
2007: John Risinger; Gadisetti V R Chandramouli; G Larry Maxwell; Mary Custer; Svetlana Pack; Dmitri Loukinov; Olga Aprelikova; Tracy Litzi; David S Schrump; Susan Murphy; Andrew Berchuck; Victor Lobanenkov; J Carl Barrett
Global expression analysis of cancer/testis genes in uterine cancers reveals a high incidence of BORIS expression.
Clinical cancer research : an official journal of the American Association for Cancer Research 2007;13(6):1713-9.
2007: Igor Chernukhin; Shaharum Shamsuddin; Sung Yun Kang; Rosita Bergström; Yoo-Wook Kwon; Wenqiang Yu; Joanne Whitehead; Rituparna Mukhopadhyay; France Docquier; Dawn Farrar; Ian Morrison; Marc Vigneron; Shwu-Yuan Wu; Cheng-Ming Chiang; Dmitri Loukinov; Victor Lobanenkov; Rolf Ohlsson; Elena Klenova
CTCF interacts with and recruits the largest subunit of RNA polymerase II to CTCF target sites genome-wide.
Molecular and cellular biology 2007;27(5):1631-48.
2007: Anne L Hancock; Keith W Brown; Kim Moorwood; Hanlim Moon; Claes Holmgren; Sudhanshu H Mardikar; Anthony R Dallosso; Elena Klenova; Dmitri Loukinov; Rolf Ohlsson; Victor Lobanenkov; Karim Malik
A CTCF-binding silencer regulates the imprinted genes AWT1 and WT1-AS and exhibits sequential epigenetic defects during Wilms' tumourigenesis.
Human molecular genetics 2007;16(3):343-54.
2007: Stéphanie Renaud; Elena Pugacheva; M Dolores Delgado; Richard Braunschweig; Ziedulla Abdullaev; Dmitri Loukinov; Jean Benhattar; Victor Lobanenkov
Expression of the CTCF-paralogous cancer-testis gene, brother of the regulator of imprinted sites (BORIS), is regulated by three alternative promoters modulated by CpG methylation and by CTCF and p53 transcription factors.
Nucleic acids research 2007;35(21):7372-88.
2007: Natalay Kouprina; Vladimir N Noskov; Adam Pavlicek; N Keith Collins; Pamela D Schoppee Bortz; Chris Ottolenghi; Dmitri Loukinov; Paul Goldsmith; John Risinger; Jung-Hyun Kim; V Anne Westbrook; Greg Solomon; Hanna Sounders; John C Herr; Jerzy Jurka; Victor Lobanenkov; David Schlessinger; Vladimir Larionov
Evolutionary diversification of SPANX-N sperm protein gene structure and expression.
PloS one 2007;2(4):e359.
2007: Stéphanie Renaud; Dmitri Loukinov; Ziedulla Abdullaev; Isabelle Guilleret; Fred T Bosman; Victor Lobanenkov; Jean Benhattar
Dual role of DNA methylation inside and outside of CTCF-binding regions in the transcriptional regulation of the telomerase hTERT gene.
Nucleic acids research 2007;35(4):1245-56.
2007: Anahit Ghochikyan; Mkrtichyan Mikayel; Dmitri Loukinov; Gregory Mamikonyan; Svetlana D Pack; Nina Movsesyan; Thomas E Ichim; David H Cribbs; Victor Lobanenkov; Michael G Agadjanyan
Elicitation of T cell responses to histologically unrelated tumors by immunization with the novel cancer-testis antigen, brother of the regulator of imprinted sites.
Journal of immunology (Baltimore, Md. : 1950) 2007;178(1):566-73.
2006: Dmitri Loukinov; Anahit Ghochikyan; Mkrtichyan Mikayel; Thomas E Ichim; Victor Lobanenkov; David H Cribbs; Michael G Agadjanyan
Antitumor efficacy of DNA vaccination to the epigenetically acting tumor promoting transcription factor BORIS and CD80 molecular adjuvant.
Journal of cellular biochemistry 2006;98(5):1037-43.
2006: Elena Pugacheva; Yoo-Wook Kwon; Neil A Hukriede; Svetlana Pack; Patrick T Flanagan; Jong-Chan Ahn; Jeong Ae Park; Kyu-Sil Choi; Kyu-Won Kim; Dmitri Loukinov; Igor B Dawid; Victor Lobanenkov
Cloning and characterization of zebrafish CTCF: Developmental expression patterns, regulation of the promoter region, and evolutionary aspects of gene organization.
Gene 2006;375():26-36.
2005: Bongjune Yoon; Herry Herman; Benjamin Hu; Yoon Jung Park; Anders Lindroth; Adam Bell; Adam G West; Yanjie Chang; Aimee Stablewski; Jessica C Piel; Dmitri Loukinov; Victor Lobanenkov; Paul D Soloway
Rasgrf1 imprinting is regulated by a CTCF-dependent methylation-sensitive enhancer blocker.
Molecular and cellular biology 2005;25(24):11184-90.
2005: Julie A Hong; Yang Kang; Ziedulla Abdullaev; Patrick T Flanagan; Svetlana D Pack; Maria R Fischette; Mina T Adnani; Dmitri Loukinov; Sergei Vatolin; John Risinger; Mary Custer; G Aaron Chen; Ming Zhao; Dao Nguyen; J Carl Barrett; Victor Lobanenkov; David S Schrump
Reciprocal binding of CTCF and BORIS to the NY-ESO-1 promoter coincides with derepression of this cancer-testis gene in lung cancer cells.
Cancer research 2005;65(17):7763-74.
2005: Sergei Vatolin; Ziedulla Abdullaev; Svetlana D Pack; Patrick T Flanagan; Mary Custer; Dmitri Loukinov; Elena Pugacheva; Julie A Hong; Herbert C Morse; David S Schrump; John Risinger; J Carl Barrett; Victor Lobanenkov
Conditional expression of the CTCF-paralogous transcriptional factor BORIS in normal cells results in demethylation and derepression of MAGE-A1 and reactivation of other cancer-testis genes.
Cancer research 2005;65(17):7751-62.
2005: France Docquier; Dawn Farrar; Vivien D'Arcy; Igor Chernukhin; Abigail F Robinson; Dmitri Loukinov; Sergei Vatolin; Svetlana Pack; Alan Mackay; Robert A Harris; Heather Dorricott; Michael J O'Hare; Victor Lobanenkov; Elena Klenova
Heightened expression of CTCF in breast cancer cells is associated with resistance to apoptosis.
Cancer research 2005;65(12):5112-22.
2005: Elena Pugacheva; Vijay Kumar Tiwari; Ziedulla Abdullaev; Alexander A Vostrov; Patrick T Flanagan; Wolfgang W Quitschke; Dmitri Loukinov; Rolf Ohlsson; Victor Lobanenkov
Familial cases of point mutations in the XIST promoter reveal a correlation between CTCF binding and pre-emptive choices of X chromosome inactivation.
Human molecular genetics 2005;14(7):953-65.
2005: Igor Kuzmin; Laura Geil; Lauren Gibson; Tiziana Cavinato; Dmitri Loukinov; Victor Lobanenkov; Michael I Lerman
Transcriptional regulator CTCF controls human interleukin 1 receptor-associated kinase 2 promoter.
Journal of molecular biology 2005;346(2):411-22.
2005: Francine E Garrett; Alexander V Emelyanov; Manuel A Sepulveda; Patrick T Flanagan; Sabrina Volpi; Fubin Li; Dmitri Loukinov; Laurel A Eckhardt; Victor Lobanenkov; Barbara K Birshtein
Chromatin architecture near a potential 3' end of the igh locus involves modular regulation of histone modifications during B-Cell development and in vivo occupancy at CTCF sites.
Molecular and cellular biology 2005;25(4):1511-25.
2005: Hanlim Moon; Galina N Filippova; Dmitri Loukinov; Elena Pugacheva; Qi Chen; Sheryl T Smith; Adam Munhall; Britta Grewe; Marek Bartkuhn; Rüdiger Arnold; Les J Burke; Renate Renkawitz-Pohl; Rolf Ohlsson; Jumin Zhou; Rainer Renkawitz; Victor Lobanenkov
CTCF is conserved from Drosophila to humans and confers enhancer blocking of the Fab-8 insulator.
EMBO reports 2005;6(2):165-70.
2005: Stéphanie Renaud; Dmitri Loukinov; Fred T Bosman; Victor Lobanenkov; Jean Benhattar
CTCF binds the proximal exonic region of hTERT and inhibits its transcription.
Nucleic acids research 2005;33(21):6850-60.
2002: Dmitri Loukinov; Elena Pugacheva; Sergei Vatolin; Svetlana D Pack; Hanlim Moon; Igor Chernukhin; Poonam Mannan; Erik Larsson; Chandrasekhar Kanduri; Alexander A Vostrov; Hengmi Cui; Emily L Niemitz; John Rasko; France Docquier; Malathi Kistler; Joseph J Breen; Zhengping Zhuang; Wolfgang W Quitschke; Rainer Renkawitz; Elena Klenova; Andrew P Feinberg; Rolf Ohlsson; Herbert C Morse; Victor Lobanenkov
BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma.
Proceedings of the National Academy of Sciences of the United States of America 2002;99(10):6806-11.
2002: Elena Loukinova; Sripriya Ranganathan; Sergey Kuznetsov; Natalia V Gorlatova; Molly Migliorini; Dmitri Loukinov; Paula G Ulery; Irina Mikhailenko; Daniel Lawrence; Dudley K Strickland
Platelet-derived growth factor (PDGF)-induced tyrosine phosphorylation of the low density lipoprotein receptor-related protein (LRP). Evidence for integrated co-receptor function betwenn LRP and the PDGF.
The Journal of biological chemistry 2002;277(18):15499-506.
2002: Galina N Filippova; Chen-Feng Qi; Jonathan E Ulmer; James M Moore; Michael D Ward; Ying J Hu; Dmitri Loukinov; Elena Pugacheva; Elena Klenova; Paul E Grundy; Andrew P Feinberg; Anne-Marie Cleton-Jansen; Elna W Moerland; Cees J Cornelisse; Hiroyoshi Suzuki; Akira Komiya; Annika Lindblom; Françoise Dorion-Bonnet; Paul E Neiman; Herbert C Morse; Steven J Collins; Victor Lobanenkov
Tumor-associated zinc finger mutations in the CTCF transcription factor selectively alter tts DNA-binding specificity.
Cancer research 2002;62(1):48-52.
2001: John Rasko; Elena Klenova; J Leon; Galina N Filippova; Dmitri Loukinov; Sergei Vatolin; Abigail F Robinson; Ying J Hu; J Ulmer; M D Ward; Elena Pugacheva; Paul E Neiman; Herbert C Morse; Steven J Collins; Victor Lobanenkov
Cell growth inhibition by the multifunctional multivalent zinc-finger factor CTCF.
Cancer research 2001;61(16):6002-7.
2001: Elena Klenova; Igor Chernukhin; Ayman El-Kady; R E Lee; Elena Pugacheva; Dmitri Loukinov; GH Goodwin; D Delgado; Galina N Filippova; Javier León; Herbert C Morse; Paul E Neiman; Victor Lobanenkov
Functional phosphorylation sites in the C-terminal region of the multivalent multifunctional transcriptional factor CTCF.
Molecular and cellular biology 2001;21(6):2221-34.
2000: Chandrasekhar Kanduri; Vinod Pant; Dmitri Loukinov; Elena Pugacheva; Chen-Feng Qi; A Wolffe; Rolf Ohlsson; Victor Lobanenkov
Functional association of CTCF with the insulator upstream of the H19 gene is parent of origin-specific and methylation-sensitive.
Current biology : CB 2000;10(14):853-6.
1999: Irina Mikhailenko; W Considine; Kelley M Argraves; Dmitri Loukinov; Bradley T Hyman; Dudley K Strickland
Functional domains of the very low density lipoprotein receptor: molecular analysis of ligand binding and acid-dependent ligand dissociation mechanisms.
Journal of cell science 1999;112 ( Pt 19)():3269-81.