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Joakim Lundeberg

This is a preview profile on BiomedExperts - the first literature-based scientific social network. It brings the right researchers together and allows them to collaborate online. Collexis and Dell provide the BiomedExperts network of +1.5 Million pre-calculated profiles free of charge to researchers worldwide.

Research Profile (preview)

Procedures

Chemicals & Drugs

Devices

Oligonucleotide Array Sequence Analysis

Concepts & Ideas

Genes & Molecular Sequences

Disorders

Skin Neoplasms

Physiology

Anatomy

Keratinocytes

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Publications

TOP 3
Pettersson Erik; Ståhl Patrik L; Mahdessian Hovsep; Käller Max; Lundeberg Joakim; Ahmadian Afshin
Visual DNA as a diagnostic tool.
Sandberg Julia; Ståhl Patrik L; Ahmadian Afshin; Bjursell Magnus K; Lundeberg Joakim
Flow cytometry for enrichment and titration in massively parallel DNA sequencing.
Höiom Veronica; Tuominen Rainer; Käller Max; Lindén Diana; Ahmadian Afshin; Månsson-Brahme Eva; Egyhazi Suzanne; Sjöberg Klas; Lundeberg Joakim; Hansson Johan
MC1R variation and melanoma risk in the Swedish population in relation to clinical and pathological parameters.

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All Publications

2009: Pettersson Erik; Ståhl Patrik L; Mahdessian Hovsep; Käller Max; Lundeberg Joakim; Ahmadian Afshin
Visual DNA as a diagnostic tool.
Electrophoresis 2009;30(21):3691-5.
2009: Sandberg Julia; Ståhl Patrik L; Ahmadian Afshin; Bjursell Magnus K; Lundeberg Joakim
Flow cytometry for enrichment and titration in massively parallel DNA sequencing.
Nucleic acids research 2009;37(8):e63.
2009: Höiom Veronica; Tuominen Rainer; Käller Max; Lindén Diana; Ahmadian Afshin; Månsson-Brahme Eva; Egyhazi Suzanne; Sjöberg Klas; Lundeberg Joakim; Hansson Johan
MC1R variation and melanoma risk in the Swedish population in relation to clinical and pathological parameters.
Pigment cell & melanoma research 2009;22(2):196-204.
2009: Ka S; Lindberg J; Strömstedt L; Fitzsimmons C; Lindqvist N; Lundeberg J; Siegel P B; Andersson L; Hallböök F
Extremely different behaviours in high and low body weight lines of chicken are associated with differential expression of genes involved in neuronal plasticity.
Journal of neuroendocrinology 2009;21(3):208-16.
2009: Pettersson Erik; Lundeberg Joakim; Ahmadian Afshin
Generations of sequencing technologies.
Genomics 2009;93(2):105-11.
2009: Klevebring Daniel; Gry Marcus; Lindberg Johan; Eidefors Anna; Lundeberg Joakim
Automation of cDNA synthesis and labelling improves reproducibility.
Journal of biomedicine & biotechnology 2009;2009():396808.
2009: Lindström Sara; Eriksson Malin; Vazin Tandis; Sandberg Julia; Lundeberg Joakim; Frisén Jonas; Andersson-Svahn Helene
High-density microwell chip for culture and analysis of stem cells.
PloS one 2009;4(9):e6997.
2008: Strömberg Sara; Björklund Marcus Gry; Asplund Anna; Rimini Rebecca; Lundeberg Joakim; Nilsson Peter; Pontén Fredrik; Olsson Mats J
Transcriptional profiling of melanocytes from patients with vitiligo vulgaris.
Pigment cell & melanoma research 2008;21(2):162-71.
2008: Asplund A; Gry Björklund M; Sundquist C; Strömberg S; Edlund K; Ostman A; Nilsson P; Pontén F; Lundeberg J
Expression profiling of microdissected cell populations selected from basal cells in normal epidermis and basal cell carcinoma.
The British journal of dermatology 2008;158(3):527-38.
2008: Björklund Marcus Gry; Natanaelsson Christian; Karlström Amelie Eriksson; Hao Yong; Lundeberg Joakim
Microarray analysis using disiloxyl 70mer oligonucleotides.
Nucleic acids research 2008;36(4):1334-42.
2008: Zajac Pawel; Pettersson Erik; Gry Marcus; Lundeberg Joakim; Ahmadian Afshin
Expression profiling of signature gene sets with trinucleotide threading.
Genomics 2008;91(2):209-17.
2008: Pettersson Erik; Zajac Pawel; Ståhl Patrik L; Jacobsson Josefin A; Fredriksson Robert; Marcus Claude; Schiöth Helgi B; Lundeberg Joakim; Ahmadian Afshin
Allelotyping by massively parallel pyrosequencing of SNP-carrying trinucleotide threads.
Human mutation 2008;29(2):323-9.
2007: Ståhl Patrik L; Gantelius Jesper; Natanaelsson Christian; Ahmadian Afshin; Andersson-Svahn Helene; Lundeberg Joakim
Visual DNA -- identification of DNA sequence variations by bead trapping.
Genomics 2007;90(6):741-5.
2007: Ribacke Ulf; Mok Bobo W; Wirta Valtteri; Normark Johan; Lundeberg Joakim; Kironde Fred; Egwang Thomas G; Nilsson Peter; Wahlgren Mats
Genome wide gene amplifications and deletions in Plasmodium falciparum.
Molecular and biochemical parasitology 2007;155(1):33-44.
2007: Apostolova Galina; Dorn Roland; Ka Sojeong; Hallböök Finn; Lundeberg Joakim; Liser Keren; Hakim Vicky; Brodski Claude; Michaelidis Theologos M; Dechant Georg
Neurotransmitter phenotype-specific expression changes in developing sympathetic neurons.
Molecular and cellular neurosciences 2007;35(3):397-408.
2007: Käller Max; Lundeberg Joakim; Ahmadian Afshin
Arrayed identification of DNA signatures.
Expert review of molecular diagnostics 2007;7(1):65-76.
2007: Laurell Cecilia; Wirta Valtteri; Nilsson Peter; Lundeberg Joakim
Comparative analysis of a 3' end tag PCR and a linear RNA amplification approach for microarray analysis.
Journal of biotechnology 2007;127(4):638-46.
2007: Svensson Per; Williams Cecilia; Lundeberg Joakim; Rydén Patrik; Bergqvist Ingela; Edlund Helena
Gene array identification of Ipf1/Pdx1-/- regulated genes in pancreatic progenitor cells.
BMC developmental biology 2007;7():129.
2007: Rubin Carl-Johan; Lindberg Johan; Fitzsimmons Carolyn; Savolainen Peter; Jensen Per; Lundeberg Joakim; Andersson Leif; Kindmark Andreas
Differential gene expression in femoral bone from red junglefowl and domestic chicken, differing for bone phenotypic traits.
BMC genomics 2007;8():208.
2006: Edlundh-Rose Esther; Egyházi Suzanne; Omholt Katarina; Månsson-Brahme Eva; Platz Anton; Hansson Johan; Lundeberg Joakim
NRAS and BRAF mutations in melanoma tumours in relation to clinical characteristics: a study based on mutation screening by pyrosequencing.
Melanoma research 2006;16(6):471-8.
2006: Williams Cecilia; Wirta Valtteri; Meletis Konstantinos; Wikström Lilian; Carlsson Leif; Frisén Jonas; Lundeberg Joakim
Catalog of gene expression in adult neural stem cells and their in vivo microenvironment.
Experimental cell research 2006;312(10):1798-812.
2006: Sievertzon Maria; Nilsson Peter; Lundeberg Joakim
Improving reliability and performance of DNA microarrays.
Expert review of molecular diagnostics 2006;6(3):481-92.
2006: Meletis Konstantinos; Wirta Valtteri; Hede Sanna-Maria; Nistér Monica; Lundeberg Joakim; Frisén Jonas
p53 suppresses the self-renewal of adult neural stem cells.
Development (Cambridge, England) 2006;133(2):363-9.
2006: Lindberg Johan; af Klint Erik; Catrina Anca Irinel; Nilsson Peter; Klareskog Lars; Ulfgren Ann-Kristin; Lundeberg Joakim
Effect of infliximab on mRNA expression profiles in synovial tissue of rheumatoid arthritis patients.
Arthritis research & therapy 2006;8(6):R179.
2006: Käller Max; Hultin Emilie; Holmberg Kristina; Persson Marie-Louise; Odeberg Jacob; Lundeberg Joakim; Ahmadian Afshin
Comparison of PrASE and Pyrosequencing for SNP Genotyping.
BMC genomics 2006;7():291.
2006: Natanaelsson Christian; Oskarsson Mattias C R; Angleby Helen; Lundeberg Joakim; Kirkness Ewen; Savolainen Peter
Dog Y chromosomal DNA sequence: identification, sequencing and SNP discovery.
BMC genetics 2006;7():45.
2006: Richter Karin; Wirta Valtteri; Dahl Lina; Bruce Sara; Lundeberg Joakim; Carlsson Leif; Williams Cecilia
Global gene expression analyses of hematopoietic stem cell-like cell lines with inducible Lhx2 expression.
BMC genomics 2006;7():75.
2006: Pettersson Erik; Lindskog Mats; Lundeberg Joakim; Ahmadian Afshin
Tri-nucleotide threading for parallel amplification of minute amounts of genomic DNA.
Nucleic acids research 2006;34(6):e49.
2006: Lindberg Johan; af Klint Erik; Ulfgren Ann-Kristin; Stark André; Andersson Tove; Nilsson Peter; Klareskog Lars; Lundeberg Joakim
Variability in synovial inflammation in rheumatoid arthritis investigated by microarray technology.
Arthritis research & therapy 2006;8(2):R47.
2005: Arvestad L; Visa N; Lundeberg J; Wieslander L; Savolainen P
Expressed sequence tags from the midgut and an epithelial cell line of Chironomus tentans: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels.
Insect molecular biology 2005;14(6):689-95.
2005: Käller Max; Tuominen Rainer; Ahmadian Afshin; Magnusson Veronica; Egyhazi Suzanne; Hansson Johan; Lundeberg Joakim
Detection of MC1R polymorphisms with protease-mediated allele-specific extension as an alternative to direct sequencing.
Clinical chemistry 2005;51(12):2388-91.
2005: Käller Max; Hultin Emilie; Zheng Biying; Gharizadeh Baback; Wallin Keng-Ling; Lundeberg Joakim; Ahmadian Afshin
Tag-array based HPV genotyping by competitive hybridization and extension.
Journal of virological methods 2005;129(2):102-12.
2005: Asplund Anna; Sivertsson Asa; Bäckvall Helena; Ahmadian Afshin; Lundeberg Joakim; Ponten Fredrik
Genetic mosaicism in basal cell carcinoma.
Experimental dermatology 2005;14(8):593-600.
2005: Asplund A; Gustafsson A C; Wikonkal N M; Sela A; Leffell D J; Kidd K; Lundeberg J; Brash D E; Pontén F
PTCH codon 1315 polymorphism and risk for nonmelanoma skin cancer.
The British journal of dermatology 2005;152(5):868-73.
2005: Ka Sojeong; Fitzsimmons Carolyn; Jacobsson Lina; Savolainen Peter; Lundeberg Joakim; Siegel Paul B; Andersson Leif; Hallböök Finn
Expression analysis of growth and energy regulation-associated genes in two divergent chicken strains.
Annals of the New York Academy of Sciences 2005;1040():357-9.
2005: Bäckvall Helena; Asplund Anna; Gustafsson Anna; Sivertsson Asa; Lundeberg Joakim; Ponten Fredrik
Genetic tumor archeology: microdissection and genetic heterogeneity in squamous and basal cell carcinoma.
Mutation research 2005;571(1-2):65-79.
2005: Holmberg Anders; Blomstergren Anna; Nord Olof; Lukacs Morten; Lundeberg Joakim; Uhlén Mathias
The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures.
Electrophoresis 2005;26(3):501-10.
2005: Edlundh-Rose Esther; Kupershmidt Ilya; Gustafsson Anna C; Parasassi Tiziana; Serafino Annalucia; Bracci-Laudiero Luisa; Greco Giulia; Krasnowska Ewa K; Romano Maria-Concetta; Lundeberg Thomas; Nilsson Peter; Lundeberg Joakim
Gene expression analysis of human epidermal keratinocytes after N-acetyl L-cysteine treatment demonstrates cell cycle arrest and increased differentiation.
Pathobiology : journal of immunopathology, molecular and cellular biology 2005;72(4):203-12.
2005: Sievertzon Maria; Wirta Valtteri; Mercer Alex; Frisén Jonas; Lundeberg Joakim
Epidermal growth factor (EGF) withdrawal masks gene expression differences in the study of pituitary adenylate cyclase-activating polypeptide (PACAP) activation of primary neural stem cell proliferation.
BMC neuroscience 2005;6():55.
2005: Savolainen P; Fitzsimmons C; Arvestad L; Andersson L; Lundeberg J
ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels.
Cytogenetic and genome research 2005;111(1):79-87.
2005: Micke Patrick; Ostman Arne; Lundeberg Joakim; Ponten Fredrik
Laser-assisted cell microdissection using the PALM system.
Methods in molecular biology (Clifton, N.J.) 2005;293():151-66.
2005: Gustafsson Anna C; Kupershmidt Ilya; Edlundh-Rose Esther; Greco Giulia; Serafino Annalucia; Krasnowska Eva K; Lundeberg Thomas; Bracci-Laudiero Luisa; Romano Maria-Concetta; Parasassi Tiziana; Lundeberg Joakim
Global gene expression analysis in time series following N-acetyl L-cysteine induced epithelial differentiation of human normal and cancer cells in vitro.
BMC cancer 2005;5():75.
2005: Sievertzon Maria; Wirta Valtteri; Mercer Alex; Meletis Konstantinos; Erlandsson Rikard; Wikström Lilian; Frisén Jonas; Lundeberg Joakim
Transcriptome analysis in primary neural stem cells using a tag cDNA amplification method.
BMC neuroscience 2005;6():28.
2005: Hultin Emilie; Käller Max; Ahmadian Afshin; Lundeberg Joakim
Competitive enzymatic reaction to control allele-specific extensions.
Nucleic acids research 2005;33(5):e48.
2005: Wirta Valtteri; Holmberg Anders; Lukacs Morten; Nilsson Peter; Hilson Pierre; Uhlén Mathias; Bhalerao Rishikesh P; Lundeberg Joakim
Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana.
BMC biotechnology 2005;5():5.
2004: Käller Max; Ahmadian Afshin; Lundeberg Joakim
Microarray-based AMASE as a novel approach for mutation detection.
Mutation research 2004;554(1-2):77-88.
2004: Bäckvall Helena; Strömberg Sara; Gustafsson Anna; Asplund Anna; Sivertsson Asa; Lundeberg Joakim; Ponten Fredrik
Mutation spectra of epidermal p53 clones adjacent to basal cell carcinoma and squamous cell carcinoma.
Experimental dermatology 2004;13(10):643-50.
2004: Schrader Jarmo; Moyle Richard; Bhalerao Rupali; Hertzberg Magnus; Lundeberg Joakim; Nilsson Peter; Bhalerao Rishikesh P
Cambial meristem dormancy in trees involves extensive remodelling of the transcriptome.
The Plant journal : for cell and molecular biology 2004;40(2):173-87.
2004: Fitzsimmons C J; Savolainen P; Amini B; Hjälm G; Lundeberg J; Andersson L
Detection of sequence polymorphisms in red junglefowl and White Leghorn ESTs.
Animal genetics 2004;35(5):391-6.
2004: Sterky Fredrik; Bhalerao Rupali R; Unneberg Per; Segerman Bo; Nilsson Peter; Brunner Amy M; Charbonnel-Campaa Laurence; Lindvall Jenny Jonsson; Tandre Karolina; Strauss Steven H; Sundberg Björn; Gustafsson Petter; Uhlén Mathias; Bhalerao Rishikesh P; Nilsson Ove; Sandberg Göran; Karlsson Jan; Lundeberg Joakim; Jansson Stefan
A Populus EST resource for plant functional genomics.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(38):13951-6.
2004: Savolainen Peter; Leitner Thomas; Wilton Alan N; Matisoo-Smith Elizabeth; Lundeberg Joakim
A detailed picture of the origin of the Australian dingo, obtained from the study of mitochondrial DNA.
Proceedings of the National Academy of Sciences of the United States of America 2004;101(33):12387-90.
2004: Ehn Maria; Nourizad Nader; Bergström Kristina; Ahmadian Afshin; Nyrén Pål; Lundeberg Joakim; Hober Sophia
Toward pyrosequencing on surface-attached genetic material by use of DNA-binding luciferase fusion proteins.
Analytical biochemistry 2004;329(1):11-20.
2004: Blomstergren Anna; Lundin Annelie; Nilsson Christina; Engstrand Lars; Lundeberg Joakim
Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates.
Gene 2004;328():85-93.
2004: Sievertzon Maria; Agaton Charlotta; Nilsson Peter; Lundeberg Joakim
Amplification of mRNA populations by a cDNA tag strategy.
BioTechniques 2004;36(2):253-9.
2004: Westberg Joakim; Persson Anja; Holmberg Anders; Goesmann Alexander; Lundeberg Joakim; Johansson Karl-Erik; Pettersson Bertil; Uhlén Mathias
The genome sequence of Mycoplasma mycoides subsp. mycoides SC type strain PG1T, the causative agent of contagious bovine pleuropneumonia (CBPP).
Genome research 2004;14(2):221-7.
2004: Gustafsson Anna C; Ren Zhi-Ping; Asplund Anna; Pontén Fredrik; Lundeberg Joakim
The role of p53 codon 72 and human papilloma virus status of cutaneous squamous cell carcinoma in the Swedish population.
Acta dermato-venereologica 2004;84(6):439-44.
2004: Andersson Anders; Keskitalo Johanna; Sjödin Andreas; Bhalerao Rupali; Sterky Fredrik; Wissel Kirsten; Tandre Karolina; Aspeborg Henrik; Moyle Richard; Ohmiya Yasunori; Bhalerao Rishikesh; Brunner Amy; Gustafsson Petter; Karlsson Jan; Lundeberg Joakim; Nilsson Ove; Sandberg Göran; Strauss Steven; Sundberg Björn; Uhlen Mathias; Jansson Stefan; Nilsson Peter
A transcriptional timetable of autumn senescence.
Genome biology 2004;5(4):R24.
2004: Boräng Stina; Andersson Tove; Thelin Anders; Odeberg Jacob; Lundeberg Joakim
Vascular gene expression in atherosclerotic plaque-prone regions analyzed by representational difference analysis.
Pathobiology : journal of immunopathology, molecular and cellular biology 2004;71(2):107-14.
2003: Gharizadeh Baback; Käller Max; Nyrén Pål; Andersson Anders; Uhlén Mathias; Lundeberg Joakim; Ahmadian Afshin
Viral and microbial genotyping by a combination of multiplex competitive hybridization and specific extension followed by hybridization to generic tag arrays.
Nucleic acids research 2003;31(22):e146.
2003: Ericsson Olle; Sivertsson Asa; Lundeberg Joakim; Ahmadian Afshin
Microarray-based resequencing by apyrase-mediated allele-specific extension.
Electrophoresis 2003;24(19-20):3330-8.
2003: Agaton Charlotta; Galli Joakim; Höidén Guthenberg Ingmarie; Janzon Lars; Hansson Marianne; Asplund Anna; Brundell Eva; Lindberg Susanne; Ruthberg Irene; Wester Kenneth; Wurtz Dorothee; Höög Christer; Lundeberg Joakim; Ståhl Stefan; Pontén Fredrik; Uhlén Mathias
Affinity proteomics for systematic protein profiling of chromosome 21 gene products in human tissues.
Molecular & cellular proteomics : MCP 2003;2(6):405-14.
2003: Andersson Tove; Boräng Stina; Unneberg Per; Wirta Valtteri; Thelin Anders; Lundeberg Joakim; Odeberg Jacob
Shotgun sequencing and microarray analysis of RDA transcripts.
Gene 2003;310():39-47.
2003: Bhalerao Rupali; Keskitalo Johanna; Sterky Fredrik; Erlandsson Rikard; Björkbacka Harry; Birve Simon Jonsson; Karlsson Jan; Gardeström Per; Gustafsson Petter; Lundeberg Joakim; Jansson Stefan
Gene expression in autumn leaves.
Plant physiology 2003;131(2):430-42.
2002: Persson Asa E; Edström Desiree W; Bäckvall Helena; Lundeberg Joakim; Pontén Fredrik; Ros Anne-Marie; Williams Cecilia
The mutagenic effect of ultraviolet-A1 on human skin demonstrated by sequencing the p53 gene in single keratinocytes.
Photodermatology, photoimmunology & photomedicine 2002;18(6):287-93.
2002: Sivertsson Asa; Platz Anton; Hansson Johan; Lundeberg Joakim
Pyrosequencing as an alternative to single-strand conformation polymorphism analysis for detection of N-ras mutations in human melanoma metastases.
Clinical chemistry 2002;48(12):2164-70.
2002: Savolainen Peter; Zhang Ya-ping; Luo Jing; Lundeberg Joakim; Leitner Thomas
Genetic evidence for an East Asian origin of domestic dogs.
Science (New York, N.Y.) 2002;298(5598):1610-3.
2002: Ehn Maria; Ahmadian Afshin; Nilsson Peter; Lundeberg Joakim; Hober Sophia
Escherichia coli single-stranded DNA-binding protein, a molecular tool for improved sequence quality in pyrosequencing.
Electrophoresis 2002;23(19):3289-99.
2002: O'Meara Deirdre; Ahmadian Afshin; Odeberg Jacob; Lundeberg Joakim
SNP typing by apyrase-mediated allele-specific primer extension on DNA microarrays.
Nucleic acids research 2002;30(15):e75.
2002: Andersson T; Unneberg P; Nilsson P; Odeberg J; Quackenbush J; Lundeberg J
Monitoring of representational difference analysis subtraction procedures by global microarrays.
BioTechniques 2002;32(6):1348-50, 1352, 1354-6, 1358.
2002: Johansson Henrik; Sterky Fredrik; Amini Bahram; Lundeberg Joakim; Kleczkowski Leszek A
Molecular cloning and characterization of a cDNA encoding poplar UDP-glucose dehydrogenase, a key gene of hemicellulose/pectin formation.
Biochimica et biophysica acta 2002;1576(1-2):53-8.
2002: Agaton Charlotta; Unneberg Per; Sievertzon Maria; Holmberg Anders; Ehn Maria; Larsson Magnus; Odeberg Jacob; Uhlén Mathias; Lundeberg Joakim
Gene expression analysis by signature pyrosequencing.
Gene 2002;289(1-2):31-9.
2002: Ahmadian Afshin; Lundeberg Joakim
A brief history of genetic variation analysis.
BioTechniques 2002;32(5):1122-4, 1126, 1128 passim.
2002: Persson Asa; Bäckvall Helena; Pontén Fredrik; Uhlén Mathias; Lundeberg Joakim
Single cell gene mutation analysis using laser-assisted microdissection of tissue sections.
Methods in enzymology 2002;356():334-43.
2001: Ahmadian A; Gharizadeh B; O'Meara D; Odeberg J; Lundeberg J
Genotyping by apyrase-mediated allele-specific extension.
Nucleic acids research 2001;29(24):E121.
2001: Hertzberg M; Aspeborg H; Schrader J; Andersson A; Erlandsson R; Blomqvist K; Bhalerao R; Uhlén M; Teeri T T; Lundeberg J; Sundberg B; Nilsson P; Sandberg G
A transcriptional roadmap to wood formation.
Proceedings of the National Academy of Sciences of the United States of America 2001;98(25):14732-7.
2001: Gustafsson A C; Kijas J M; Alderborn A; Uhlén M; Andersson L; Lundeberg J
Screening and scanning of single nucleotide polymorphisms in the pig melanocortin 1 receptor gene (MC1R) by pyrosequencing.
Animal biotechnology 2001;12(2):145-53.
2001: Ling G; Ahmadian A; Persson A; Undén A B; Afink G; Williams C; Uhlén M; Toftgård R; Lundeberg J; Pontén F
PATCHED and p53 gene alterations in sporadic and hereditary basal cell cancer.
Oncogene 2001;20(53):7770-8.
2001: Ling G; Persson A; Berne B; Uhlén M; Lundeberg J; Ponten F
Persistent p53 mutations in single cells from normal human skin.
The American journal of pathology 2001;159(4):1247-53.
2001: Boräng S; Andersson T; Thelin A; Larsson M; Odeberg J; Lundeberg J
Monitoring of the subtraction process in solid-phase representational difference analysis: characterization of a candidate drug.
Gene 2001;271(2):183-92.
2001: Gustafsson A C; Guo Z; Hu X; Ahmadian A; Brodin B; Nilsson A; Pontén J; Pontén F; Lundeberg J
HPV-related cancer susceptibility and p53 codon 72 polymorphism.
Acta dermato-venereologica 2001;81(2):125-9.
2001: Hertzberg M; Sievertzon M; Aspeborg H; Nilsson P; Sandberg G; Lundeberg J
cDNA microarray analysis of small plant tissue samples using a cDNA tag target amplification protocol.
The Plant journal : for cell and molecular biology 2001;25(5):585-91.
2001: O'Meara D; Wilbe K; Leitner T; Hejdeman B; Albert J; Lundeberg J
Monitoring resistance to human immunodeficiency virus type 1 protease inhibitors by pyrosequencing.
Journal of clinical microbiology 2001;39(2):464-73.
2001: Nygren M; Ronaghi M; Nyrén P; Albert J; Lundeberg J
Quantification of HIV-1 using multiple quantitative polymerase chain reaction standards and bioluminometric detection.
Analytical biochemistry 2001;288(1):28-38.
2001: Andersson T; Boräng S; Larsson M; Wirta V; Wennborg A; Lundeberg J; Odeberg J
Novel candidate genes for atherosclerosis are identified by representational difference analysis-based transcript profiling of cholesterol-loaded macrophages.
Pathobiology : journal of immunopathology, molecular and cellular biology 2001;69(6):304-14.
2000: Persson A E; Ling G; Williams C; Bäckvall H; Pontén J; Pontén F; Lundeberg J
Analysis of p53 mutations in single cells obtained from histological tissue sections.
Analytical biochemistry 2000;287(1):25-31.
2000: Savolainen P; Arvestad L; Lundeberg J
A novel method for forensic DNA investigations: repeat-type sequence analysis of tandemly repeated mtDNA in domestic dogs.
Journal of forensic sciences 2000;45(5):990-9.
2000: Blomstergren A; O'Meara D; Lukacs M; Uhlén M; Lundeberg J
Cooperative oligonucleotides in purification of cycle sequencing products.
BioTechniques 2000;29(2):352-4, 356, 358 passim.
2000: Garcia C A; Ahmadian A; Gharizadeh B; Lundeberg J; Ronaghi M; Nyrén P
Mutation detection by pyrosequencing: sequencing of exons 5-8 of the p53 tumor suppressor gene.
Gene 2000;253(2):249-57.
2000: Ahmadian A; Gharizadeh B; Gustafsson A C; Sterky F; Nyrén P; Uhlén M; Lundeberg J
Single-nucleotide polymorphism analysis by pyrosequencing.
Analytical biochemistry 2000;280(1):103-10.
2000: Savolainen P; Arvestad L; Lundeberg J
mtDNA tandem repeats in domestic dogs and wolves: mutation mechanism studied by analysis of the sequence of imperfect repeats.
Molecular biology and evolution 2000;17(4):474-88.
2000: Sterky F; Lundeberg J
Sequence analysis of genes and genomes.
Journal of biotechnology 2000;76(1):1-31.
2000: Ahmadian A; Lundeberg J; Nyrén P; Uhlén M; Ronaghi M
Analysis of the p53 tumor suppressor gene by pyrosequencing.
BioTechniques 2000;28(1):140-4, 146-7.
2000: Nygren M; Reizenstein E; Ronaghi M; Lundeberg J
Polymorphism in the pertussis toxin promoter region affecting the DNA-based diagnosis of Bordetella infection.
Journal of clinical microbiology 2000;38(1):55-60.
1999: Williams C; Pontén F; Moberg C; Söderkvist P; Uhlén M; Pontén J; Sitbon G; Lundeberg J
A high frequency of sequence alterations is due to formalin fixation of archival specimens.
The American journal of pathology 1999;155(5):1467-71.
1999: Odeberg J; Ahmadian A; Williams C; Uhlén M; Pontén F; Lundeberg J
Context-dependent Taq-polymerase-mediated nucleotide alterations, as revealed by direct sequencing of the ZNF189 gene: implications for mutation detection.
Gene 1999;235(1-2):103-9.
1999: Vener T; Holmberg A; Lundeberg J; Uhlén M
Selection analysis of single-stranded clones using solid-phase techniques.
Genetic analysis : biomolecular engineering 1999;15(2):47-50.
1999: Nilsson P; O'meara D; Edebratt F; Persson B; Uhlén M; Lundeberg J; Nygren P
Quantitative investigation of the modular primer effect for DNA and peptide nucleic acid hexamers.
Analytical biochemistry 1999;269(1):155-61.
1999: Nilsson P; Larsson A; Lundeberg J; Uhlén M; Nygren P A
Mutational scanning of PCR products by subtractive oligonucleotide hybridization analysis.
BioTechniques 1999;26(2):308-16.
1999: Ronaghi M; Nygren M; Lundeberg J; Nyrén P
Analyses of secondary structures in DNA by pyrosequencing.
Analytical biochemistry 1999;267(1):65-71.
1999: Savolainen P; Lundeberg J
Forensic evidence based on mtDNA from dog and wolf hairs.
Journal of forensic sciences 1999;44(1):77-81.
1999: Ståhl S; Odeberg J; Larsson M; Røsok O; Ree A H; Lundeberg J
Solid-phase differential display and bacterial expression systems in selection and functional analysis of cDNAs.
Methods in enzymology 1999;303():495-511.
1998: Sterky F; Regan S; Karlsson J; Hertzberg M; Rohde A; Holmberg A; Amini B; Bhalerao R; Larsson M; Villarroel R; Van Montagu M; Sandberg G; Olsson O; Teeri T T; Boerjan W; Gustafsson P; Uhlén M; Sundberg B; Lundeberg J
Gene discovery in the wood-forming tissues of poplar: analysis of 5, 692 expressed sequence tags.
Proceedings of the National Academy of Sciences of the United States of America 1998;95(22):13330-5.
1998: Ahmadian A; Ren Z P; Williams C; Pontén F; Odeberg J; Pontén J; Uhlén M; Lundeberg J
Genetic instability in the 9q22.3 region is a late event in the development of squamous cell carcinoma.
Oncogene 1998;17(14):1837-43.
1998: O'Meara D; Yun Z; Sönnerborg A; Lundeberg J
Cooperative oligonucleotides mediating direct capture of hepatitis C virus RNA from serum.
Journal of clinical microbiology 1998;36(9):2454-9.
1998: Odeberg J; Yun Z; Sönnerborg A; Weiland O; Lundeberg J
Variation in the hepatitis C virus NS5a region in relation to hypervariable region 1 heterogeneity during interferon treatment.
Journal of medical virology 1998;56(1):33-8.
1998: Vener T; Nygren M; Andersson A; Uhlén M; Albert J; Lundeberg J
Use of multiple competitors for quantification of human immunodeficiency virus type 1 RNA in plasma.
Journal of clinical microbiology 1998;36(7):1864-70.
1998: Odeberg J; Røsok O; Gudmundsson G H; Ahmadian A; Roshani L; Williams C; Larsson C; Pontén F; Uhlén M; Asheim H C; Lundeberg J
Cloning and characterization of ZNF189, a novel human Krüppel-like zinc finger gene localized to chromosome 9q22-q31.
Genomics 1998;50(2):213-21.
1998: Williams C; Pontén F; Ahmadian A; Ren Z P; Ling G; Rollman O; Ljung A; Jaspers N G; Uhlén M; Lundeberg J; Pontén J
Clones of normal keratinocytes and a variety of simultaneously present epidermal neoplastic lesions contain a multitude of p53 gene mutations in a xeroderma pigmentosum patient.
Cancer research 1998;58(11):2449-55.
1998: Williams C; Norberg T; Ahmadian A; Pontén F; Bergh J; Inganäs M; Lundeberg J; Uhlén M
Assessment of sequence-based p53 gene analysis in human breast cancer: messenger RNA in comparison with genomic DNA targets.
Clinical chemistry 1998;44(3):455-62.
1998: Sterky F; Holmberg A; Alexandersson G; Lundeberg J; Uhlén M
Direct sequencing of bacterial artificial chromosomes (BACs) and prokaryotic genomes by biotin-capture PCR.
Journal of biotechnology 1998;60(1-2):119-29.
1998: O'Meara D; Nilsson P; Nygren P A; Uhlén M; Lundeberg J
Capture of single-stranded DNA assisted by oligonucleotide modules.
Analytical biochemistry 1998;255(2):195-203.
1997: Pontén F; Williams C; Ling G; Ahmadian A; Nistér M; Lundeberg J; Pontén J; Uhlén M
Genomic analysis of single cells from human basal cell cancer using laser-assisted capture microscopy.
Mutation research 1997;382(1-2):45-55.
1997: Pontén F; Berg C; Ahmadian A; Ren Z P; Nistér M; Lundeberg J; Uhlén M; Pontén J
Molecular pathology in basal cell cancer with p53 as a genetic marker.
Oncogene 1997;15(9):1059-67.
1997: Savolainen P; Rosén B; Holmberg A; Leitner T; Uhlén M; Lundeberg J
Sequence analysis of domestic dog mitochondrial DNA for forensic use.
Journal of forensic sciences 1997;42(4):593-600.
1997: Ren Z P; Ahmadian A; Pontén F; Nistér M; Berg C; Lundeberg J; Uhlén M; Pontén J
Benign clonal keratinocyte patches with p53 mutations show no genetic link to synchronous squamous cell precancer or cancer in human skin.
The American journal of pathology 1997;150(5):1791-803.
1997: Nilsson J; Bosnes M; Larsen F; Nygren P A; Uhlén M; Lundeberg J
Heat-mediated activation of affinity-immobilized Taq DNA polymerase.
BioTechniques 1997;22(4):744-51.
1997: Odeberg J; Yun Z; Sönnerborg A; Bjøro K; Uhlén M; Lundeberg J
Variation of hepatitis C virus hypervariable region 1 in immunocompromised patients.
The Journal of infectious diseases 1997;175(4):938-43.
1997: Seesod N; Nopparat P; Hedrum A; Holder A; Thaithong S; Uhlen M; Lundeberg J
An integrated system using immunomagnetic separation, polymerase chain reaction, and colorimetric detection for diagnosis of Plasmodium falciparum.
The American journal of tropical medicine and hygiene 1997;56(3):322-8.
1996: Vener T; Axelsson M; Albert J; Uhlén M; Lundeberg J
Quantification of HIV-1 using multiple competitors in a single-tube assay.
BioTechniques 1996;21(2):248-52, 253-5.
1996: Røsok O; Odeberg J; Rode M; Stokke T; Funderud S; Smeland E; Lundeberg J
Solid-phase method for differential display of genes expressed in hematopoietic stem cells.
BioTechniques 1996;21(1):114-21.
1996: Stark M; Reizenstein E; Uhlén M; Lundeberg J
Immunomagnetic separation and solid-phase detection of Bordetella pertussis.
Journal of clinical microbiology 1996;34(4):778-84.
1996: Yun Z B; Odeberg J; Lundeberg J; Weiland O; Uhlen M; Sonnerborg A
Restriction of hepatitis C virus heterogeneity during prolonged interferon-alpha therapy in relation to changes in virus load.
The Journal of infectious diseases 1996;173(4):992-6.
1996: Ren Z P; Hedrum A; Pontén F; Nistér M; Ahmadian A; Lundeberg J; Uhlén M; Pontén J
Human epidermal cancer and accompanying precursors have identical p53 mutations different from p53 mutations in adjacent areas of clonally expanded non-neoplastic keratinocytes.
Oncogene 1996;12(4):765-73.
1996: Lundeberg J; Pettersson B; Uhlén M
Direct DNA sequencing of PCR products using magnetic beads.
Methods in molecular biology (Clifton, N.J.) 1996;65():57-66.
1995: Berg C; Hedrum A; Holmberg A; Pontén F; Uhlén M; Lundeberg J
Direct solid-phase sequence analysis of the human p53 gene by use of multiplex polymerase chain reaction and alpha-thiotriphosphate nucleotides.
Clinical chemistry 1995;41(10):1461-6.
1995: Odeberg J; Yun Z; Sönnerborg A; Uhlén M; Lundeberg J
Dynamic analysis of heterogeneous hepatitis C virus populations by direct solid-phase sequencing.
Journal of clinical microbiology 1995;33(7):1870-4.
1995: Lundeberg J; Uhlén M
DNA mapping and sequencing technology.
Trends in biotechnology 1995;13(1):10-1.
1994: Hedrum A; Pontén F; Ren Z; Lundeberg J; Pontén J; Uhlén M
Sequence-based analysis of the human p53 gene based on microdissection of tumor biopsy samples.
BioTechniques 1994;17(1):118-9, 122-4, 126-9.
1994: Yun Z; Lundeberg J; Johansson B; Hedrum A; Weiland O; Uhlén M; Sönnerborg A
Colorimetric detection of competitive PCR products for quantification of hepatitis C viremia.
Journal of virological methods 1994;47(1-2):1-13.
1994: Lundeberg J; Bondesson L; Hedrum A; Grillner L; Stark M; von Krogh G; Uhlén M
Microtiter assay for colorimetric detection of in vitro amplified Chlamydia trachomatis sequences.
Scandinavian journal of infectious diseases 1994;26(3):275-82.
1994: Yun Z B; Reichard O; Chen M; Lundeberg J; Norkrans G; Fryden A; Sönnerborg A; Weiland O
Serum hepatitis C virus RNA levels in chronic hepatitis C--importance for outcome of interferon alfa-2b treatment.
Scandinavian journal of infectious diseases 1994;26(3):263-70.
1993: Ljungquist C; Lundeberg J; Rasmussen A M; Hornes E; Uhlen M
Immobilization and recovery of fusion proteins and B-lymphocyte cells using magnetic separation.
DNA and cell biology 1993;12(2):191-7.
1993: Ståhl S; Hansson M; Ahlborg N; Nguyen T N; Liljeqvist S; Lundeberg J; Uhlén M
Solid-phase gene assembly of constructs derived from the Plasmodium falciparum malaria blood-stage antigen Ag332.
BioTechniques 1993;14(3):424-34.
1992: Hedrum A; Lundeberg J; Påhlson C; Uhlén M
Immunomagnetic recovery of Chlamydia trachomatis from urine with subsequent colorimetric DNA detection.
PCR methods and applications 1992;2(2):167-71.
1992: Holmberg M; Wahlberg J; Lundeberg J; Pettersson U; Uhlén M
Colorimetric detection of Plasmodium falciparum and direct sequencing of amplified gene fragments using a solid phase method.
Molecular and cellular probes 1992;6(3):201-8.
1992: Uhlén M; Hultman T; Wahlberg J; Lundeberg J; Bergh S; Pettersson B; Holmberg A; Ståhl S; Moks T
Semi-automated solid-phase DNA sequencing.
Trends in biotechnology 1992;10(1-2):52-5.
1991: Lundeberg J; Wahlberg J; Uhlén M
Rapid colorimetric quantification of PCR-amplified DNA.
BioTechniques 1991;10(1):68-75.
1990: Wahlberg J; Lundeberg J; Hultman T; Uhlén M
General colorimetric method for DNA diagnostics allowing direct solid-phase genomic sequencing of the positive samples.
Proceedings of the National Academy of Sciences of the United States of America 1990;87(17):6569-73.
1990: Wahlberg J; Lundeberg J; Hultman T; Holmberg M; Uhlén M
Rapid detection and sequencing of specific in vitro amplified DNA sequences using solid phase methods.
Molecular and cellular probes 1990;4(4):285-97.
1990: Lundeberg J; Wahlberg J; Holmberg M; Pettersson U; Uhlén M
Rapid colorimetric detection of in vitro amplified DNA sequences.
DNA and cell biology 1990;9(4):287-92.

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